AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0227790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227790 MtrunA17_Chr2g0323661 93.976 83 4 1 1 83 1 82 2.22e-48 157
Msa0227790 MtrunA17_Chr2g0323661 61.333 75 20 2 162 235 10 76 3.12e-22 89.4
Msa0227790 MtrunA17_Chr2g0323661 59.459 74 24 3 88 161 10 77 8.75e-19 79.7
Msa0227790 MtrunA17_Chr2g0323661 48.148 81 31 1 237 317 10 79 1.80e-15 70.9
Msa0227790 MtrunA17_Chr2g0323611 88.235 85 9 1 1 85 1 84 3.89e-46 151
Msa0227790 MtrunA17_Chr2g0323611 59.459 74 23 1 162 235 10 76 1.88e-22 89.7
Msa0227790 MtrunA17_Chr2g0323611 58.108 74 25 3 88 161 10 77 1.50e-18 79.3
Msa0227790 MtrunA17_Chr2g0323611 46.914 81 32 1 237 317 10 79 1.08e-14 68.6
Msa0227790 MtrunA17_Chr2g0323631 91.026 78 7 0 83 160 6 83 3.34e-44 147
Msa0227790 MtrunA17_Chr2g0323631 64.198 81 24 3 10 85 11 91 2.64e-25 97.8
Msa0227790 MtrunA17_Chr2g0323631 60.000 75 27 2 162 235 11 83 3.28e-20 84.0
Msa0227790 MtrunA17_Chr2g0323631 48.837 86 37 2 233 317 7 86 2.72e-17 75.9
Msa0227790 MtrunA17_Chr2g0323571 89.744 78 8 0 83 160 6 83 5.73e-43 144
Msa0227790 MtrunA17_Chr2g0323571 64.198 81 24 3 10 85 11 91 1.37e-25 98.6
Msa0227790 MtrunA17_Chr2g0323571 61.842 76 24 3 162 235 11 83 1.39e-21 87.8
Msa0227790 MtrunA17_Chr2g0323571 52.326 86 34 2 233 317 7 86 4.67e-18 78.2
Msa0227790 MtrunA17_Chr2g0323671 88.462 78 9 0 83 160 6 83 1.99e-42 142
Msa0227790 MtrunA17_Chr2g0323671 64.198 81 24 3 10 85 11 91 3.22e-25 97.4
Msa0227790 MtrunA17_Chr2g0323671 60.526 76 25 3 162 235 11 83 4.22e-21 86.3
Msa0227790 MtrunA17_Chr2g0323671 52.326 86 34 2 233 317 7 86 6.33e-18 77.8
Msa0227790 MtrunA17_Chr2g0323701 87.179 78 10 0 158 235 4 81 2.12e-42 142
Msa0227790 MtrunA17_Chr2g0323701 61.250 80 25 1 10 83 8 87 2.97e-27 102
Msa0227790 MtrunA17_Chr2g0323701 61.538 78 25 3 86 160 6 81 6.98e-22 88.6
Msa0227790 MtrunA17_Chr2g0323701 57.317 82 29 2 237 317 8 84 4.48e-20 83.6
Msa0227790 MtrunA17_Chr2g0323721 87.838 74 9 0 162 235 8 81 1.24e-39 135
Msa0227790 MtrunA17_Chr2g0323721 57.303 89 30 2 1 83 1 87 2.09e-25 97.8
Msa0227790 MtrunA17_Chr2g0323721 57.692 78 28 3 86 160 6 81 9.55e-20 82.8
Msa0227790 MtrunA17_Chr2g0323721 59.259 81 29 2 237 317 8 84 1.95e-19 82.0
Msa0227790 MtrunA17_Chr2g0323601 79.268 82 16 1 236 317 7 87 1.38e-30 111
Msa0227790 MtrunA17_Chr2g0323601 52.128 94 34 2 1 85 1 92 1.24e-23 93.2
Msa0227790 MtrunA17_Chr2g0323601 59.740 77 28 2 162 235 8 84 1.45e-18 79.7
Msa0227790 MtrunA17_Chr2g0323601 55.422 83 31 3 83 160 3 84 5.47e-18 77.8
Msa0227790 MtrunA17_Chr2g0323681 84.706 85 10 1 236 317 7 91 5.66e-30 110
Msa0227790 MtrunA17_Chr2g0323681 50.000 98 34 2 1 85 1 96 8.09e-21 85.9
Msa0227790 MtrunA17_Chr2g0323681 53.086 81 31 1 162 235 8 88 1.68e-16 73.9
Msa0227790 MtrunA17_Chr2g0323681 51.724 87 32 2 83 160 3 88 8.51e-16 72.0
Msa0227790 MtrunA17_Chr2g0323651 78.049 82 16 1 236 317 7 86 5.98e-30 109
Msa0227790 MtrunA17_Chr2g0323651 54.839 93 32 2 1 85 1 91 1.34e-22 90.5
Msa0227790 MtrunA17_Chr2g0323651 56.098 82 31 2 83 160 3 83 4.13e-17 75.5
Msa0227790 MtrunA17_Chr2g0323651 61.842 76 27 1 162 235 8 83 5.21e-17 75.1
Msa0227790 MtrunA17_Chr2g0323711 78.049 82 16 1 236 317 7 86 5.98e-30 109
Msa0227790 MtrunA17_Chr2g0323711 54.839 93 32 2 1 85 1 91 1.34e-22 90.5
Msa0227790 MtrunA17_Chr2g0323711 56.098 82 31 2 83 160 3 83 4.13e-17 75.5
Msa0227790 MtrunA17_Chr2g0323711 61.842 76 27 1 162 235 8 83 5.21e-17 75.1
Msa0227790 MtrunA17_Chr4g0022611 61.538 91 27 3 1 85 1 89 1.43e-26 100
Msa0227790 MtrunA17_Chr4g0022611 67.532 77 22 2 86 160 6 81 8.45e-25 96.3
Msa0227790 MtrunA17_Chr4g0022611 68.000 75 22 2 162 235 8 81 5.88e-23 91.3
Msa0227790 MtrunA17_Chr4g0022611 65.476 84 21 3 236 317 7 84 1.44e-19 82.0
Msa0227790 MtrunA17_Chr2g0318641 49.451 91 39 3 71 160 24 108 5.12e-18 79.0
Msa0227790 MtrunA17_Chr2g0318641 45.349 86 43 3 1 85 34 116 1.57e-14 69.3
Msa0227790 MtrunA17_Chr2g0318641 43.182 88 34 5 233 317 37 111 9.80e-12 61.6
Msa0227790 MtrunA17_Chr2g0318601 50.562 89 40 3 1 87 1 87 7.81e-18 77.4
Msa0227790 MtrunA17_Chr2g0318601 48.718 78 37 1 83 160 3 77 3.87e-16 72.8
Msa0227790 MtrunA17_Chr2g0318601 48.193 83 33 2 236 317 7 80 7.86e-15 69.3
Msa0227790 MtrunA17_Chr2g0318601 58.696 46 18 1 162 206 8 53 1.61e-11 60.1
Msa0227790 MtrunA17_Chr2g0318611 53.846 78 33 1 83 160 3 77 9.76e-18 77.0
Msa0227790 MtrunA17_Chr2g0318611 51.685 89 39 3 1 87 1 87 1.05e-17 77.0
Msa0227790 MtrunA17_Chr2g0318611 51.807 83 30 2 236 317 7 80 6.79e-16 72.0
Msa0227790 MtrunA17_Chr2g0318611 50.667 75 31 2 162 235 8 77 2.07e-12 62.4
Msa0227790 MtrunA17_Chr2g0323551 51.899 79 33 2 12 85 10 88 1.35e-17 76.6
Msa0227790 MtrunA17_Chr2g0323551 49.315 73 34 2 164 235 10 80 2.07e-13 65.1
Msa0227790 MtrunA17_Chr2g0323551 48.810 84 39 4 83 164 3 84 2.38e-13 65.1
Msa0227790 MtrunA17_Chr2g0323551 44.578 83 39 3 236 317 7 83 1.23e-11 60.5
Msa0227790 MtrunA17_Chr2g0318591 49.425 87 40 3 1 85 1 85 1.11e-11 60.5
Msa0227790 MtrunA17_Chr2g0318591 52.174 46 22 0 83 128 3 48 2.55e-11 59.3
Msa0227790 MtrunA17_Chr2g0318591 48.235 85 34 2 234 317 5 80 3.47e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227790 AT4G10265.1 60.465 86 30 3 1 85 1 83 6.30e-25 96.7
Msa0227790 AT4G10265.1 60.526 76 25 1 85 160 5 75 7.17e-24 94.0
Msa0227790 AT4G10265.1 54.667 75 26 2 162 235 8 75 3.87e-17 75.9
Msa0227790 AT4G10265.1 48.780 82 30 3 237 317 8 78 1.20e-15 71.6
Msa0227790 AT4G10270.1 61.250 80 29 1 83 160 3 82 1.72e-22 90.5
Msa0227790 AT4G10270.1 48.913 92 38 3 1 85 1 90 9.56e-21 85.9
Msa0227790 AT4G10270.1 57.333 75 31 1 162 235 8 82 5.38e-17 75.5
Msa0227790 AT4G10270.1 51.807 83 35 2 236 317 7 85 6.11e-15 70.1

Find 63 sgRNAs with CRISPR-Local

Find 552 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTATTGCTAGCAAATTTA+AGG 0.110379 2_1:+79060039 Msa0227790:CDS
GGATTTCTCATCCCTCAATT+TGG 0.235218 2_1:-79057527 None:intergenic
CTGTCATGTTCTTGAGCTGC+TGG 0.343401 2_1:+79057575 Msa0227790:CDS
TATGGTTTCTAGTAGATTAG+AGG 0.368983 2_1:+79064401 Msa0227790:CDS
CTCGGCCCAGAACGACAAAA+TGG 0.378250 2_1:-79067948 Msa0227800:intron
AACCATAGCATACGAATTAG+AGG 0.381872 2_1:-79064385 Msa0227800:three_prime_UTR
GGATGAGAAGAAGGCAAAAC+AGG 0.400035 2_1:+79060060 Msa0227790:CDS
TTAAATTTGCTAGCAATAAG+TGG 0.408213 2_1:-79060037 None:intergenic
AAGATCAAGGAATATGTAGA+TGG 0.418152 2_1:+79067133 Msa0227790:CDS
TGGAGTGGTGGAGGCTTTGA+AGG 0.421743 2_1:+79057399 Msa0227790:CDS
AAGATCAAGCTGGTATTTGT+AGG 0.423985 2_1:+79059930 Msa0227790:CDS
TTTCTTCTTCAACCAAATTG+AGG 0.427146 2_1:+79057515 Msa0227790:CDS
CAAAGATTCCTCCGACTGGC+TGG 0.435235 2_1:-79057548 None:intergenic
TTCTTCTTCAACCAAATTGA+GGG 0.442795 2_1:+79057516 Msa0227790:CDS
TTCCTCTAATTCGTATGCTA+TGG 0.448488 2_1:+79064383 Msa0227790:CDS
TGTCATGTTCTTGAGCTGCT+GGG 0.448867 2_1:+79057576 Msa0227790:CDS
CGAAGCAGAAGAAGAAGAAG+AGG 0.471655 2_1:-79067238 Msa0227800:intron
GGCTGCAAGTGTTGGAGTTG+TGG 0.471925 2_1:+79059898 Msa0227790:CDS
AACATGCTAAACATAATATC+AGG 0.478609 2_1:+79057467 Msa0227790:CDS
AACAGTTCATCACGCAAGAA+TGG 0.480644 2_1:-79067913 Msa0227800:intron
CAACAGCAACAAGCAAAGCC+TGG 0.483212 2_1:+79059870 Msa0227790:intron
CAAATTTAAGGATGAGAAGA+AGG 0.496478 2_1:+79060051 Msa0227790:CDS
GTAGAAGCATTAAAAGATCA+AGG 0.504299 2_1:+79067120 Msa0227790:CDS
AATTCCACCTGCACAAGCCT+TGG 0.504448 2_1:-79064290 Msa0227800:three_prime_UTR
CTACACTCCATGTCCATGCT+CGG 0.507250 2_1:-79057366 None:intergenic
AACAAGTGTTGGAGTGGTGG+AGG 0.510421 2_1:+79057390 Msa0227790:CDS
TGCAGCAAGTGTTGGAGTTG+TGG 0.515291 2_1:+79064254 Msa0227790:CDS
TGGACAGTTGCAGCAAGTGT+TGG 0.518964 2_1:+79064246 Msa0227790:CDS
TGGATGGTGGCTGCAAGTGT+TGG 0.520041 2_1:+79059890 Msa0227790:CDS
TAAAAGACCAAGGCTTGTGC+AGG 0.522039 2_1:+79064283 Msa0227790:CDS
AGCAGAGCATGGGTAGCTGC+AGG 0.522642 2_1:+79067084 Msa0227790:intron
AACACTTGCAGCCACCATCC+AGG 0.526165 2_1:-79059888 None:intergenic
TTTCAAATTAATAATCTCCT+CGG 0.528674 2_1:-79067966 Msa0227800:intron
GTGGAGGCTTTGAAGGATCA+AGG 0.541801 2_1:+79057406 Msa0227790:CDS
TTCTCAAAGATTCCTCCGAC+TGG 0.550443 2_1:-79057552 None:intergenic
AAGACCAAGGCTTGTGCAGG+TGG 0.553596 2_1:+79064286 Msa0227790:CDS
CAAGAAGCCGAGCATGGACA+TGG 0.553815 2_1:+79057359 Msa0227790:CDS
GTCATGTTCTTGAGCTGCTG+GGG 0.555931 2_1:+79057577 Msa0227790:CDS
CAAGTACATGACAGTCCTCA+AGG 0.563012 2_1:-79060092 None:intergenic
AGCAACAAGCAAAGCCTGGA+TGG 0.571199 2_1:+79059874 Msa0227790:intron
CTTGAGACATTGATTTAACA+CGG 0.573162 2_1:-79059994 None:intergenic
GAAGAAGGCAAAACAGGCAG+AGG 0.577515 2_1:+79060066 Msa0227790:CDS
TGGAGTGTAGCAACAAGTGT+TGG 0.577926 2_1:+79057379 Msa0227790:CDS
AGCAACAAGTGTTGGAGTGG+TGG 0.580152 2_1:+79057387 Msa0227790:CDS
AGCAATCAGAGGAATCTTTG+AGG 0.586212 2_1:+79067295 Msa0227790:CDS
TGCAAGTGTTGGAGTTGTGG+AGG 0.587512 2_1:+79059901 Msa0227790:CDS
AGAACGACAAAATGGAGGAT+AGG 0.589130 2_1:-79067940 Msa0227800:intron
GAGTTCAACAAGCAGAGCAT+GGG 0.590239 2_1:+79067074 Msa0227790:intron
TGAGTTCAAGAAGCCGAGCA+TGG 0.595479 2_1:+79057353 Msa0227790:CDS
ATTCTTGCGTGATGAACTGT+TGG 0.596153 2_1:+79067915 Msa0227790:CDS
AGCAATCAGAGGAATCTTTG+AGG 0.602790 2_1:+79064436 Msa0227790:CDS
ATCAAGCTGGTATTTGTAGG+TGG 0.610975 2_1:+79059933 Msa0227790:CDS
AGGATCAAGGAATATGCAGA+TGG 0.620547 2_1:+79057419 Msa0227790:CDS
TGAGAAATCCAGCCAGTCGG+AGG 0.622085 2_1:+79057540 Msa0227790:CDS
GTGGAAGCCTTAAAAGACCA+AGG 0.622225 2_1:+79064273 Msa0227790:CDS
AGAGAATGCAAAGCAATCAG+AGG 0.632612 2_1:+79067284 Msa0227790:CDS
ACAAGAAGCAAAGCAATCAG+AGG 0.645903 2_1:+79064425 Msa0227790:CDS
AACAAGCAAAGCCTGGATGG+TGG 0.651830 2_1:+79059877 Msa0227790:CDS
GAGGCTTTGAAAGATCAAGC+TGG 0.655112 2_1:+79059920 Msa0227790:CDS
GGATGAGAAATCCAGCCAGT+CGG 0.660168 2_1:+79057537 Msa0227790:CDS
GGCCCAGAACGACAAAATGG+AGG 0.672089 2_1:-79067945 Msa0227800:intron
TGTAGCAACAAGTGTTGGAG+TGG 0.680919 2_1:+79057384 Msa0227790:CDS
AACAGGCAGAGGAATCCTTG+AGG 0.700969 2_1:+79060077 Msa0227790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTCTTGAATATT+TGG + chr2_1:79059470-79059489 Msa0227790:intron 10.0%
!! AAAAAGATGTATAATAAATA+GGG + chr2_1:79061493-79061512 Msa0227790:intron 10.0%
!! AAAAAAAAAAAATACTTCAA+GGG - chr2_1:79062520-79062539 None:intergenic 10.0%
!! TAAAAAAAAAAAATACTTCA+AGG - chr2_1:79062521-79062540 None:intergenic 10.0%
!! AAATAATTGAGTTAATTAAT+TGG - chr2_1:79062579-79062598 None:intergenic 10.0%
!! ATTATTTAAATAAACCTATT+AGG + chr2_1:79062648-79062667 Msa0227790:intron 10.0%
!!! TATTTATAAACAAAAGTATA+TGG - chr2_1:79064836-79064855 Msa0227800:intron 10.0%
!! ATTGAAAAATATATAAGTAA+TGG + chr2_1:79066357-79066376 Msa0227790:intron 10.0%
!!! CAAAATTAGTAATTTTTTAT+TGG + chr2_1:79066439-79066458 Msa0227790:intron 10.0%
!! AAATGTTAATTTCTTTAGTT+GGG - chr2_1:79057604-79057623 None:intergenic 15.0%
!! TTTATAAGATAAAATACTCT+TGG + chr2_1:79058466-79058485 Msa0227790:intron 15.0%
!! AGTTATTTGAAAATCAAAAT+AGG + chr2_1:79058970-79058989 Msa0227790:intron 15.0%
!! TTATTCATAAAAGCAATTAT+AGG + chr2_1:79059159-79059178 Msa0227790:intron 15.0%
!! TATTCATAAAAGCAATTATA+GGG + chr2_1:79059160-79059179 Msa0227790:intron 15.0%
!! TTTCAAAGATTGTATATTTA+TGG - chr2_1:79059409-79059428 None:intergenic 15.0%
!!! AAAATGAAAACAAATTTGTT+AGG + chr2_1:79059533-79059552 Msa0227790:intron 15.0%
!!! TTTTATTTAATTTCCAAAAC+CGG + chr2_1:79059637-79059656 Msa0227790:intron 15.0%
!!! TATGTTTTATAGTTGATTTT+TGG - chr2_1:79059836-79059855 None:intergenic 15.0%
!! TATGTACAAATTAATCAATT+GGG - chr2_1:79060130-79060149 None:intergenic 15.0%
!! AAAATTTATCACACAAATTA+TGG - chr2_1:79060485-79060504 None:intergenic 15.0%
!!! AAATCTTGTTTACATTTAAT+TGG + chr2_1:79060957-79060976 Msa0227790:intron 15.0%
!! GTATTAATTAGAGTTATAAA+TGG - chr2_1:79061258-79061277 None:intergenic 15.0%
!! GAAAAAGATGTATAATAAAT+AGG + chr2_1:79061492-79061511 Msa0227790:intron 15.0%
!! AAAAGATGTATAATAAATAG+GGG + chr2_1:79061494-79061513 Msa0227790:intron 15.0%
!! AAAGAAATAATTAATGTAGT+TGG + chr2_1:79061526-79061545 Msa0227790:intron 15.0%
!! GACAAAAAAAATTCTTAAAA+GGG + chr2_1:79061576-79061595 Msa0227790:intron 15.0%
!! AAAGAAAACAAAGAATTATA+TGG + chr2_1:79061917-79061936 Msa0227790:intron 15.0%
!! CATAAAAAGACAAAAAAAAA+AGG + chr2_1:79062704-79062723 Msa0227790:intron 15.0%
!!! CTTTTTTTTAAGTAGTTTAT+TGG + chr2_1:79063371-79063390 Msa0227790:intron 15.0%
!!! TAATAAAGTATGTAATTTGT+AGG - chr2_1:79064176-79064195 Msa0227800:three_prime_UTR 15.0%
!!! CAATATTGGAAAATAAATTT+TGG - chr2_1:79064587-79064606 Msa0227800:intron 15.0%
!!! TTGATGTAAATTTTGATAAA+TGG + chr2_1:79064616-79064635 Msa0227790:intron 15.0%
!!! AAATTTTGATAAATGGAAAA+TGG + chr2_1:79064623-79064642 Msa0227790:intron 15.0%
!! ATGTAAATGAAATTTACAAA+TGG - chr2_1:79064859-79064878 Msa0227800:intron 15.0%
!! TTAACAATGATAAAATTACT+AGG - chr2_1:79065302-79065321 Msa0227800:intron 15.0%
!!! CTCAATATTTTTATTTACAT+TGG + chr2_1:79066161-79066180 Msa0227790:intron 15.0%
!!! TACTAGTAAAAAAAACTTTT+TGG + chr2_1:79067561-79067580 Msa0227790:intron 15.0%
!!! ATTGATATTTTCATTTAAGA+AGG + chr2_1:79067631-79067650 Msa0227790:intron 15.0%
!!! TATATTTTACCTTTTTTTCT+TGG - chr2_1:79067693-79067712 Msa0227800:intron 15.0%
!! GAAATGTTAATTTCTTTAGT+TGG - chr2_1:79057605-79057624 None:intergenic 20.0%
!! TCATGAATTTGTGTATATAT+AGG + chr2_1:79057723-79057742 Msa0227790:intron 20.0%
!!! ATGTAGAAAATGTTTTGTAT+GGG + chr2_1:79058012-79058031 Msa0227790:intron 20.0%
!!! TTGTGATTTTAATATCATGT+GGG - chr2_1:79059508-79059527 None:intergenic 20.0%
!!! ATTGTGATTTTAATATCATG+TGG - chr2_1:79059509-79059528 None:intergenic 20.0%
!! AAAACAAAATATATCTACGT+TGG - chr2_1:79059621-79059640 None:intergenic 20.0%
!! CTATGTACAAATTAATCAAT+TGG - chr2_1:79060131-79060150 None:intergenic 20.0%
!! TTCAAAATTGGAAGAAAATT+TGG - chr2_1:79060525-79060544 None:intergenic 20.0%
!! TCTCAAATCAAATTCAAAAT+TGG - chr2_1:79060537-79060556 None:intergenic 20.0%
!! ATGATATAATTGTTGATCAA+TGG + chr2_1:79060644-79060663 Msa0227790:intron 20.0%
!!! GTTTTTTTTTAATGTGAATG+AGG + chr2_1:79060843-79060862 Msa0227790:intron 20.0%
!! GGACAAAAAAAATTCTTAAA+AGG + chr2_1:79061575-79061594 Msa0227790:intron 20.0%
!!! TTAAAAGGGTCTTATAATTA+GGG + chr2_1:79061590-79061609 Msa0227790:intron 20.0%
!! TCCACTAAAAATAAATTCAA+CGG - chr2_1:79061723-79061742 None:intergenic 20.0%
!! TTCATTAAATTCAAAATCTC+AGG - chr2_1:79062076-79062095 None:intergenic 20.0%
!! TGAGAAATAGAATAGATTTA+AGG + chr2_1:79062418-79062437 Msa0227790:intron 20.0%
!!! AATAGATTTAAGGTATTGTT+TGG + chr2_1:79062428-79062447 Msa0227790:intron 20.0%
!! AAAATTACCAATAGAATACT+CGG - chr2_1:79062604-79062623 None:intergenic 20.0%
!! ATAAATGACTACTAGAAATT+TGG + chr2_1:79063112-79063131 Msa0227790:intron 20.0%
!! TAAATGACTACTAGAAATTT+GGG + chr2_1:79063113-79063132 Msa0227790:intron 20.0%
!! TACTAGGAAAAACAAAATTA+AGG - chr2_1:79063290-79063309 None:intergenic 20.0%
!! ATTCACATCTTAAAATGAAT+AGG + chr2_1:79063399-79063418 Msa0227790:intron 20.0%
!!! TCAGTGTATTATCAATTTTT+GGG - chr2_1:79063921-79063940 Msa0227800:three_prime_UTR 20.0%
!!! TTCAGTGTATTATCAATTTT+TGG - chr2_1:79063922-79063941 Msa0227800:three_prime_UTR 20.0%
!! ATCAATATATGTCTCAATAT+TGG - chr2_1:79064601-79064620 Msa0227800:intron 20.0%
!! AGAACATAAGTAAAATCTAA+AGG - chr2_1:79064936-79064955 Msa0227800:intron 20.0%
!! AAACAAGATATTCTTCAATT+TGG + chr2_1:79065357-79065376 Msa0227790:intron 20.0%
!!! TCAATTTGGAAAAGTATATA+TGG + chr2_1:79065371-79065390 Msa0227790:intron 20.0%
!!! TACTTAATGTCTTATTGTTT+TGG + chr2_1:79065671-79065690 Msa0227790:intron 20.0%
!! TCAAGAAGATATTTAATACA+AGG - chr2_1:79065806-79065825 Msa0227800:intron 20.0%
!! TAAATATCTTCTTGAGAATA+TGG + chr2_1:79065811-79065830 Msa0227790:intron 20.0%
!!! TACATTTTAAATGTTCAATG+CGG - chr2_1:79066243-79066262 Msa0227800:intron 20.0%
!! ATGATTAATATAGAAGATAG+TGG - chr2_1:79066323-79066342 Msa0227800:intron 20.0%
!!! TTATGCTAATAAGTGTTTTA+AGG + chr2_1:79066398-79066417 Msa0227790:intron 20.0%
!!! CATACAACTTTTTAAAAGTA+TGG - chr2_1:79066476-79066495 Msa0227800:intron 20.0%
!! TTATTCCTATGAATAACTAT+AGG + chr2_1:79066563-79066582 Msa0227790:intron 20.0%
!! AAAAACCTATAGTTATTCAT+AGG - chr2_1:79066571-79066590 Msa0227800:intron 20.0%
!!! TTTGAAATGCTAAAGTTAAT+AGG - chr2_1:79066917-79066936 Msa0227800:intron 20.0%
!!! TAAAAGTGTATTTTGTGTTT+TGG - chr2_1:79066985-79067004 Msa0227800:intron 20.0%
!!! TATTTATCTTGTTGTTCATT+CGG - chr2_1:79067517-79067536 Msa0227800:intron 20.0%
!!! AATAAATTTGAGATGAAAGA+AGG + chr2_1:79067533-79067552 Msa0227790:intron 20.0%
!!! ATATTTCTACCAAGAAAAAA+AGG + chr2_1:79067681-79067700 Msa0227790:intron 20.0%
!! TAGAAACATTTATTCAAATG+CGG - chr2_1:79067726-79067745 Msa0227800:intron 20.0%
!! CATAGAATAGAAAATACTAA+TGG - chr2_1:79067835-79067854 Msa0227800:intron 20.0%
! AACATGCTAAACATAATATC+AGG + chr2_1:79057467-79057486 Msa0227790:CDS 25.0%
!!! TGAAGAAGAAATTTTGTTGT+TGG - chr2_1:79057506-79057525 None:intergenic 25.0%
! TTAACATTTCAACTATGCAA+AGG + chr2_1:79057615-79057634 Msa0227790:intron 25.0%
!! AATCATCCCTTTTATTGTTT+TGG + chr2_1:79057699-79057718 Msa0227790:intron 25.0%
! CATGATCCAAAACAATAAAA+GGG - chr2_1:79057708-79057727 None:intergenic 25.0%
! TCATGATCCAAAACAATAAA+AGG - chr2_1:79057709-79057728 None:intergenic 25.0%
!! ATGAGATGTATTTTATCAAC+AGG + chr2_1:79057797-79057816 Msa0227790:intron 25.0%
!! TGAGATGTATTTTATCAACA+GGG + chr2_1:79057798-79057817 Msa0227790:intron 25.0%
!! CATGTAGAAAATGTTTTGTA+TGG + chr2_1:79058011-79058030 Msa0227790:intron 25.0%
! TTAGTTAAGATCCAAATTGT+AGG + chr2_1:79058175-79058194 Msa0227790:intron 25.0%
! TAGTTAAGATCCAAATTGTA+GGG + chr2_1:79058176-79058195 Msa0227790:intron 25.0%
! TGTACCAAAAAAAAAAGATC+CGG + chr2_1:79058214-79058233 Msa0227790:intron 25.0%
! AGAGTTTAATAGCTTATAGA+AGG + chr2_1:79058299-79058318 Msa0227790:intron 25.0%
!!! ATGCTCTAGGTTTTTTTTTT+TGG - chr2_1:79058394-79058413 None:intergenic 25.0%
!! AATACAAAGTTGCTCTTTTT+AGG - chr2_1:79058641-79058660 None:intergenic 25.0%
! GAGACTCATTATAGAAATAT+AGG - chr2_1:79058715-79058734 None:intergenic 25.0%
! AAAATATAGCATTCATCATG+GGG - chr2_1:79058762-79058781 None:intergenic 25.0%
! GAAAATATAGCATTCATCAT+GGG - chr2_1:79058763-79058782 None:intergenic 25.0%
! AGAAAATATAGCATTCATCA+TGG - chr2_1:79058764-79058783 None:intergenic 25.0%
! ATAGTTTAATGTGAACGTTT+GGG + chr2_1:79058867-79058886 Msa0227790:intron 25.0%
!! ATTTTCAAATGTGTTGTGAA+AGG - chr2_1:79059004-79059023 None:intergenic 25.0%
!!! TAGGTATTGATAGATGATAT+AGG + chr2_1:79059289-79059308 Msa0227790:intron 25.0%
! TATTGATAGATGATATAGGT+TGG + chr2_1:79059293-79059312 Msa0227790:intron 25.0%
!!! TGTGATTTTAATATCATGTG+GGG - chr2_1:79059507-79059526 None:intergenic 25.0%
!! AATGGTCGATCTTATTTATA+TGG - chr2_1:79059736-79059755 None:intergenic 25.0%
!! AAAATGAGATTGTTGATTGA+TGG - chr2_1:79059772-79059791 None:intergenic 25.0%
!!! TTAAATTTGCTAGCAATAAG+TGG - chr2_1:79060040-79060059 None:intergenic 25.0%
! ACTTATTGCTAGCAAATTTA+AGG + chr2_1:79060039-79060058 Msa0227790:CDS 25.0%
! TCATCAAATTCAATACTGAT+CGG - chr2_1:79060260-79060279 None:intergenic 25.0%
! GAAAGATGCTTAATTATTGT+AGG + chr2_1:79060566-79060585 Msa0227790:intron 25.0%
! ATGCTTAATTATTGTAGGAT+AGG + chr2_1:79060571-79060590 Msa0227790:intron 25.0%
! TGATCAACAATTATATCATC+TGG - chr2_1:79060643-79060662 None:intergenic 25.0%
!! ATACATTGGTTACTGAATTA+AGG + chr2_1:79060693-79060712 Msa0227790:intron 25.0%
!! TACATTGGTTACTGAATTAA+GGG + chr2_1:79060694-79060713 Msa0227790:intron 25.0%
! AACTAATATTCAAGTAACAG+AGG + chr2_1:79060727-79060746 Msa0227790:intron 25.0%
!!! TTTAGAAATTGCTTTTGCTT+TGG - chr2_1:79060753-79060772 None:intergenic 25.0%
!!! GCAAAAGCAATTTCTAAAAT+TGG + chr2_1:79060755-79060774 Msa0227790:intron 25.0%
! TATTATATGTCAAACCAACA+CGG - chr2_1:79060915-79060934 None:intergenic 25.0%
! TCTTATACACCAGATAAATT+TGG + chr2_1:79061034-79061053 Msa0227790:intron 25.0%
! GTTAATTAGGAATTGTCTAA+TGG + chr2_1:79061103-79061122 Msa0227790:intron 25.0%
! ATAAATGACTCAGTTAATCT+AGG - chr2_1:79061148-79061167 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - chr2_1:79061185-79061204 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - chr2_1:79061186-79061205 None:intergenic 25.0%
! GAGTTATAAATGGAAAAAAG+TGG - chr2_1:79061248-79061267 None:intergenic 25.0%
!!! TTCCCGTTATTTTTTCAAAA+GGG - chr2_1:79061355-79061374 None:intergenic 25.0%
!!! ATTCCCGTTATTTTTTCAAA+AGG - chr2_1:79061356-79061375 None:intergenic 25.0%
!! CTTAAAAGGGTCTTATAATT+AGG + chr2_1:79061589-79061608 Msa0227790:intron 25.0%
!!! TCCGTTGAATTTATTTTTAG+TGG + chr2_1:79061719-79061738 Msa0227790:intron 25.0%
! TATGTTATGTTATGCTATGA+AGG + chr2_1:79061743-79061762 Msa0227790:intron 25.0%
!! ACAATTTTTGAACCAGAATA+AGG + chr2_1:79061983-79062002 Msa0227790:intron 25.0%
! AAAACATGATCACATACATA+AGG - chr2_1:79062276-79062295 None:intergenic 25.0%
! TATTTAACCGAGTATTCTAT+TGG + chr2_1:79062594-79062613 Msa0227790:intron 25.0%
! ACTTTGTTCTTATTCCTAAT+AGG - chr2_1:79062665-79062684 None:intergenic 25.0%
! AGGAAAAACAAAATTAAGGA+GGG - chr2_1:79063286-79063305 None:intergenic 25.0%
! TAGGAAAAACAAAATTAAGG+AGG - chr2_1:79063287-79063306 None:intergenic 25.0%
! ACATCTTAAAATGAATAGGT+TGG + chr2_1:79063403-79063422 Msa0227790:intron 25.0%
!! TATCTTTCAAACTATTTTGC+CGG + chr2_1:79063503-79063522 Msa0227790:intron 25.0%
! ATCCACTAGTATAAAAAGAA+GGG - chr2_1:79063555-79063574 None:intergenic 25.0%
! AATCCACTAGTATAAAAAGA+AGG - chr2_1:79063556-79063575 None:intergenic 25.0%
!! ATGATGTTGTTTAGTTAGAA+GGG - chr2_1:79063585-79063604 None:intergenic 25.0%
! AACAATTGCACATACAAATT+AGG + chr2_1:79063664-79063683 Msa0227790:intron 25.0%
! ACAATTGCACATACAAATTA+GGG + chr2_1:79063665-79063684 Msa0227790:intron 25.0%
!!! CTTACATCTTGTTAATTTGT+AGG - chr2_1:79063860-79063879 None:intergenic 25.0%
! TCATAAGATAACAAAACCAT+TGG + chr2_1:79063972-79063991 Msa0227790:intron 25.0%
!!! TCTTTTTTGTTCATCCTAAT+AGG - chr2_1:79064513-79064532 Msa0227800:intron 25.0%
! TGAACAAAAAAGATTGTATC+TGG + chr2_1:79064520-79064539 Msa0227790:intron 25.0%
!! TTTGCAACACTTAACATTTT+AGG + chr2_1:79064982-79065001 Msa0227790:intron 25.0%
! GTCATGTGACAATATTATAA+AGG + chr2_1:79065446-79065465 Msa0227790:intron 25.0%
!!! TTATTGTTTTGGTGAATATG+TGG + chr2_1:79065682-79065701 Msa0227790:intron 25.0%
!! ACATGAGAATTATCACATTT+TGG - chr2_1:79065735-79065754 Msa0227800:intron 25.0%
! AGAAGATATTTAATACAAGG+AGG - chr2_1:79065803-79065822 Msa0227800:intron 25.0%
! ATGAAAAAAAAAATCGCTTG+AGG + chr2_1:79065892-79065911 Msa0227790:intron 25.0%
! TGAAAAAAAAAATCGCTTGA+GGG + chr2_1:79065893-79065912 Msa0227790:intron 25.0%
! TAAACCTTTAGATAAAGATG+TGG + chr2_1:79066057-79066076 Msa0227790:intron 25.0%
!! ATAAATATGGTGTTGAAAAG+TGG - chr2_1:79066501-79066520 Msa0227800:intron 25.0%
! AGGAGGCAAAAATATAAATA+TGG - chr2_1:79066514-79066533 Msa0227800:intron 25.0%
!!! AAAGAGTATTCTTTAGACAT+TGG - chr2_1:79066539-79066558 Msa0227800:intron 25.0%
! TAGAATAATCCTGAATTTGA+GGG - chr2_1:79067433-79067452 Msa0227800:intron 25.0%
! TTAGAATAATCCTGAATTTG+AGG - chr2_1:79067434-79067453 Msa0227800:intron 25.0%
! AGAAACATTTATTCAAATGC+GGG - chr2_1:79067725-79067744 Msa0227800:intron 25.0%
TTTCTTCTTCAACCAAATTG+AGG + chr2_1:79057515-79057534 Msa0227790:CDS 30.0%
TTCTTCTTCAACCAAATTGA+GGG + chr2_1:79057516-79057535 Msa0227790:CDS 30.0%
! CAAAAACTTTTGTGCTTGAT+TGG - chr2_1:79057646-79057665 None:intergenic 30.0%
! GAAAAAATGTTTGAGATCGT+AGG + chr2_1:79057907-79057926 Msa0227790:intron 30.0%
!!! CAATCCGGATCTTTTTTTTT+TGG - chr2_1:79058221-79058240 None:intergenic 30.0%
! TCTAGGATGAATTTACAATC+CGG - chr2_1:79058236-79058255 None:intergenic 30.0%
!! TTTTGAGAGTTTGATAGTCT+AGG - chr2_1:79058253-79058272 None:intergenic 30.0%
GACTATCAAACTCTCAAAAA+CGG + chr2_1:79058254-79058273 Msa0227790:intron 30.0%
! TCAATTGTTTTCTATGCTCT+AGG - chr2_1:79058407-79058426 None:intergenic 30.0%
!! TCATGTTAACTTGTGTCATT+AGG + chr2_1:79058600-79058619 Msa0227790:intron 30.0%
!! CATGTTAACTTGTGTCATTA+GGG + chr2_1:79058601-79058620 Msa0227790:intron 30.0%
GATAGTTTAATGTGAACGTT+TGG + chr2_1:79058866-79058885 Msa0227790:intron 30.0%
ATTATTTGAGTCTCACAAGT+AGG + chr2_1:79059270-79059289 Msa0227790:intron 30.0%
AAACCTCTATACGATTAAAC+AGG - chr2_1:79059453-79059472 None:intergenic 30.0%
! TTTAAGATAAGGACCCATTA+AGG + chr2_1:79059560-79059579 Msa0227790:intron 30.0%
TTAAGATAAGGACCCATTAA+GGG + chr2_1:79059561-79059580 Msa0227790:intron 30.0%
GGATTCAAATAAGATACCAT+GGG - chr2_1:79059715-79059734 None:intergenic 30.0%
TGGATTCAAATAAGATACCA+TGG - chr2_1:79059716-79059735 None:intergenic 30.0%
AAGATGTAGATAGAGTTGTT+TGG - chr2_1:79059803-79059822 None:intergenic 30.0%
!! CTTGAGACATTGATTTAACA+CGG - chr2_1:79059997-79060016 None:intergenic 30.0%
CAAATTTAAGGATGAGAAGA+AGG + chr2_1:79060051-79060070 Msa0227790:CDS 30.0%
AACTGCAATATTATTCAACG+AGG + chr2_1:79060194-79060213 Msa0227790:intron 30.0%
CATCAAATTCAATACTGATC+GGG - chr2_1:79060259-79060278 None:intergenic 30.0%
! TGTGTTATTACGATGATTAG+AGG + chr2_1:79060283-79060302 Msa0227790:intron 30.0%
! GTGTTATTACGATGATTAGA+GGG + chr2_1:79060284-79060303 Msa0227790:intron 30.0%
AACAAATACTTACCACATCT+TGG + chr2_1:79060328-79060347 Msa0227790:intron 30.0%
TTTACACTACTCCATCTATT+CGG - chr2_1:79060436-79060455 None:intergenic 30.0%
TTGTCACACAGATTTGTATT+TGG + chr2_1:79060607-79060626 Msa0227790:intron 30.0%
! ACATTGGTTACTGAATTAAG+GGG + chr2_1:79060695-79060714 Msa0227790:intron 30.0%
TTCACATCACCAAATTTATC+TGG - chr2_1:79061046-79061065 None:intergenic 30.0%
!! TAAATTTGGTGATGTGAAGT+TGG + chr2_1:79061048-79061067 Msa0227790:intron 30.0%
AGTATAAATAAAGGGGAAAG+TGG - chr2_1:79061310-79061329 None:intergenic 30.0%
ACGGAGGTAGTATAAATAAA+GGG - chr2_1:79061318-79061337 None:intergenic 30.0%
! AATAACGGGAATTAAGATAG+TGG + chr2_1:79061364-79061383 Msa0227790:intron 30.0%
AATGTAGTTGGAAATAGCAA+AGG + chr2_1:79061538-79061557 Msa0227790:intron 30.0%
ATGTAGTTGGAAATAGCAAA+GGG + chr2_1:79061539-79061558 Msa0227790:intron 30.0%
TTATGAAAACTTGTACTTGC+AGG + chr2_1:79061766-79061785 Msa0227790:intron 30.0%
GGACACTTAAAACTTACAAA+TGG + chr2_1:79061787-79061806 Msa0227790:intron 30.0%
TGCTACTAACTTTCAAATCA+TGG + chr2_1:79062009-79062028 Msa0227790:intron 30.0%
! TTTAATGAAGCATCATACCA+CGG + chr2_1:79062087-79062106 Msa0227790:intron 30.0%
! GCTTTTATAGACAGGTTTTT+AGG - chr2_1:79062143-79062162 None:intergenic 30.0%
!! TTTGAATTTTGGAGATCTCT+TGG + chr2_1:79062187-79062206 Msa0227790:intron 30.0%
GTTGAAGATTGAAGACTTAA+TGG + chr2_1:79062223-79062242 Msa0227790:intron 30.0%
! ATCATGTTTTCTTTGAACCT+AGG + chr2_1:79062286-79062305 Msa0227790:intron 30.0%
TGATTGAAACATCAATACCT+AGG - chr2_1:79062306-79062325 None:intergenic 30.0%
TCATAAGTAGCTAAACTCTT+AGG + chr2_1:79062323-79062342 Msa0227790:intron 30.0%
CATAAGTAGCTAAACTCTTA+GGG + chr2_1:79062324-79062343 Msa0227790:intron 30.0%
! CTTAAATTGGAGGGTATAAA+AGG + chr2_1:79062739-79062758 Msa0227790:intron 30.0%
AGTATGGTATTTCTCTAGTT+TGG - chr2_1:79062876-79062895 None:intergenic 30.0%
TTGATCTGATTGAACTATGT+AGG + chr2_1:79062988-79063007 Msa0227790:intron 30.0%
TTAGAGAGGGAAATTAATGA+TGG - chr2_1:79063156-79063175 None:intergenic 30.0%
CACAAATTAGTGATTAGAGA+GGG - chr2_1:79063169-79063188 None:intergenic 30.0%
TCACAAATTAGTGATTAGAG+AGG - chr2_1:79063170-79063189 None:intergenic 30.0%
! TCTCTAATCACTAATTTGTG+AGG + chr2_1:79063169-79063188 Msa0227790:intron 30.0%
! CTCTAATCACTAATTTGTGA+GGG + chr2_1:79063170-79063189 Msa0227790:intron 30.0%
ATGATTACTACAAATTTGCG+AGG + chr2_1:79063234-79063253 Msa0227790:intron 30.0%
TGATTACTACAAATTTGCGA+GGG + chr2_1:79063235-79063254 Msa0227790:intron 30.0%
TTAAGGAGGGAAAATAATGA+CGG - chr2_1:79063273-79063292 None:intergenic 30.0%
TACCTTGCACAATATATGTA+GGG - chr2_1:79063451-79063470 None:intergenic 30.0%
GTATAAAAAGAAGGGCAAAA+TGG - chr2_1:79063547-79063566 None:intergenic 30.0%
! GATGATGTTGTTTAGTTAGA+AGG - chr2_1:79063586-79063605 None:intergenic 30.0%
AATTTCTTATCATGTGCTCT+TGG + chr2_1:79063816-79063835 Msa0227790:intron 30.0%
ATTTCTTATCATGTGCTCTT+GGG + chr2_1:79063817-79063836 Msa0227790:intron 30.0%
ACATCTGTGATATAAACATG+TGG + chr2_1:79063894-79063913 Msa0227790:intron 30.0%
TTGATTGATTGTGCAATTGA+GGG - chr2_1:79064120-79064139 Msa0227800:three_prime_UTR 30.0%
TTTGATTGATTGTGCAATTG+AGG - chr2_1:79064121-79064140 Msa0227800:three_prime_UTR 30.0%
TGAGTTCATCAATCAGAATT+TGG + chr2_1:79064226-79064245 Msa0227790:intron 30.0%
!! TATGGTTTCTAGTAGATTAG+AGG + chr2_1:79064401-79064420 Msa0227790:CDS 30.0%
! AGTCATGTACTTAAGTTGTT+GGG + chr2_1:79064461-79064480 Msa0227790:intron 30.0%
CTAATAATTAGAGCCATCAA+GGG + chr2_1:79064487-79064506 Msa0227790:intron 30.0%
AGATAACACTAATAAATGCG+AGG - chr2_1:79064911-79064930 Msa0227800:intron 30.0%
!! AAGTGTTGCAAAAGATTTTG+AGG - chr2_1:79064974-79064993 Msa0227800:intron 30.0%
!! TAACATTTTAGGAGGAGTTA+AGG + chr2_1:79064993-79065012 Msa0227790:intron 30.0%
! AACATTGATTACTCCAAAGA+AGG - chr2_1:79065046-79065065 Msa0227800:intron 30.0%
AATGAACTAGTTCATACTCT+GGG + chr2_1:79065207-79065226 Msa0227790:intron 30.0%
ACCAGTGGCAAATATTATAA+AGG + chr2_1:79065333-79065352 Msa0227790:intron 30.0%
TGTGATATGTCTTATGTTGA+AGG + chr2_1:79065478-79065497 Msa0227790:intron 30.0%
TATGTTGAAGGATATGCATT+TGG + chr2_1:79065490-79065509 Msa0227790:intron 30.0%
! ATCTATGAGTTTTTGCTTCT+TGG - chr2_1:79065516-79065535 Msa0227800:intron 30.0%
AGAAGCAAAAACTCATAGAT+TGG + chr2_1:79065516-79065535 Msa0227790:intron 30.0%
TGTTGAATCTCACTTAAGTT+AGG + chr2_1:79065637-79065656 Msa0227790:intron 30.0%
GTTGAATCTCACTTAAGTTA+GGG + chr2_1:79065638-79065657 Msa0227790:intron 30.0%
TTGAATCTCACTTAAGTTAG+GGG + chr2_1:79065639-79065658 Msa0227790:intron 30.0%
ATATCTTCTTGAGAATATGG+TGG + chr2_1:79065814-79065833 Msa0227790:intron 30.0%
! ACATACACTTGCATCATTTT+TGG - chr2_1:79065870-79065889 Msa0227800:intron 30.0%
GAAAAAAAAAATCGCTTGAG+GGG + chr2_1:79065894-79065913 Msa0227790:intron 30.0%
AAAAAAAAAATCGCTTGAGG+GGG + chr2_1:79065895-79065914 Msa0227790:intron 30.0%
!! ATATATTAGTCTTGCTTGTG+TGG + chr2_1:79066290-79066309 Msa0227790:intron 30.0%
! GTATTCTTTAGACATTGGTT+AGG - chr2_1:79066534-79066553 Msa0227800:intron 30.0%
ACAGATGTAAAAGCTCATAT+AGG - chr2_1:79066595-79066614 Msa0227800:intron 30.0%
TAATGAAATGCCCAAAGAAT+GGG - chr2_1:79066893-79066912 Msa0227800:intron 30.0%
!!! AGTGTATTTTGTGTTTTGGT+TGG - chr2_1:79066981-79067000 Msa0227800:intron 30.0%
!! GTAGAAGCATTAAAAGATCA+AGG + chr2_1:79067120-79067139 Msa0227790:CDS 30.0%
AAGATCAAGGAATATGTAGA+TGG + chr2_1:79067133-79067152 Msa0227790:CDS 30.0%
TGAATTTGAGGGAAATTCAA+GGG - chr2_1:79067422-79067441 Msa0227800:intron 30.0%
!!! TTTTTTTTGGTTGCAGCTCT+AGG - chr2_1:79058381-79058400 None:intergenic 35.0%
TTGCAAGTCACTTATGATGA+AGG + chr2_1:79058576-79058595 Msa0227790:intron 35.0%
TGCAAGTCACTTATGATGAA+GGG + chr2_1:79058577-79058596 Msa0227790:intron 35.0%
TTCTATCCAATCTTCCAATG+AGG + chr2_1:79058780-79058799 Msa0227790:intron 35.0%
! TAATGTGAACGTTTGGGATT+AGG + chr2_1:79058873-79058892 Msa0227790:intron 35.0%
TCACCTGTTTAATCGTATAG+AGG + chr2_1:79059447-79059466 Msa0227790:intron 35.0%
TCTTGAATATTTGGCTAGAG+TGG + chr2_1:79059479-79059498 Msa0227790:intron 35.0%
! TGTTAGGCACGTTTAAGATA+AGG + chr2_1:79059549-79059568 Msa0227790:intron 35.0%
TAAGATAAGGACCCATTAAG+GGG + chr2_1:79059562-79059581 Msa0227790:intron 35.0%
AGCTAGATAACTAACACACT+TGG - chr2_1:79059690-79059709 None:intergenic 35.0%
! TGTTGATTGATGGAGTATAG+AGG - chr2_1:79059762-79059781 None:intergenic 35.0%
AAGATCAAGCTGGTATTTGT+AGG + chr2_1:79059930-79059949 Msa0227790:CDS 35.0%
TTATTACGATGATTAGAGGG+TGG + chr2_1:79060287-79060306 Msa0227790:intron 35.0%
CCAGATCTATTTGTGTAAGA+GGG - chr2_1:79060671-79060690 None:intergenic 35.0%
CCTCTTACACAAATAGATCT+GGG + chr2_1:79060669-79060688 Msa0227790:intron 35.0%
CTCTTACACAAATAGATCTG+GGG + chr2_1:79060670-79060689 Msa0227790:intron 35.0%
AAATAGATCTGGGGATACAT+TGG + chr2_1:79060679-79060698 Msa0227790:intron 35.0%
!! TGGCTTTGAAGAGGTTAATT+AGG + chr2_1:79061090-79061109 Msa0227790:intron 35.0%
ATGACTCAGTTAATCTAGGA+CGG - chr2_1:79061144-79061163 None:intergenic 35.0%
CGGAGGTAGTATAAATAAAG+GGG - chr2_1:79061317-79061336 None:intergenic 35.0%
GACGGAGGTAGTATAAATAA+AGG - chr2_1:79061319-79061338 None:intergenic 35.0%
TCAAAAGGGCCCTATAATTA+GGG - chr2_1:79061341-79061360 None:intergenic 35.0%
TTCAAAAGGGCCCTATAATT+AGG - chr2_1:79061342-79061361 None:intergenic 35.0%
!! GGGCCCTTTTGAAAAAATAA+CGG + chr2_1:79061349-79061368 Msa0227790:intron 35.0%
!! GGCCCTTTTGAAAAAATAAC+GGG + chr2_1:79061350-79061369 Msa0227790:intron 35.0%
! TATCCTTTAAGAGAGAGAGT+TGG + chr2_1:79061433-79061452 Msa0227790:intron 35.0%
AAACCAACTCTCTCTCTTAA+AGG - chr2_1:79061439-79061458 None:intergenic 35.0%
TGTAGTTGGAAATAGCAAAG+GGG + chr2_1:79061540-79061559 Msa0227790:intron 35.0%
! AGCAAAGGGGTCTTATAAAA+AGG + chr2_1:79061553-79061572 Msa0227790:intron 35.0%
! GCAAAGGGGTCTTATAAAAA+GGG + chr2_1:79061554-79061573 Msa0227790:intron 35.0%
! AAGGGTCTTATAATTAGGGA+CGG + chr2_1:79061594-79061613 Msa0227790:intron 35.0%
AGCCAAGAGCTCAATTAATT+CGG + chr2_1:79061650-79061669 Msa0227790:intron 35.0%
CAAGCTGTCTAAAAACACTA+AGG - chr2_1:79061892-79061911 None:intergenic 35.0%
!!! CTTAGTGTTTTTAGACAGCT+TGG + chr2_1:79061890-79061909 Msa0227790:intron 35.0%
TTAGTAGCAACTCCTTATTC+TGG - chr2_1:79061998-79062017 None:intergenic 35.0%
!!! GAAGCAAGGGTTTTGAATTT+TGG + chr2_1:79062176-79062195 Msa0227790:intron 35.0%
GAAGATTGAAGACTTAATGG+TGG + chr2_1:79062226-79062245 Msa0227790:intron 35.0%
CATAAGGATCGACTATTAGA+TGG - chr2_1:79062260-79062279 None:intergenic 35.0%
GTGTGTGTTGTGTCTTAAAT+TGG + chr2_1:79062726-79062745 Msa0227790:intron 35.0%
TGTGTTGTGTCTTAAATTGG+AGG + chr2_1:79062729-79062748 Msa0227790:intron 35.0%
GTGTTGTGTCTTAAATTGGA+GGG + chr2_1:79062730-79062749 Msa0227790:intron 35.0%
TCCTCTTTCTTCGCTTATAT+GGG + chr2_1:79062787-79062806 Msa0227790:intron 35.0%
! AAGAGAGATAAGTTTTGCGT+GGG - chr2_1:79062835-79062854 None:intergenic 35.0%
TTTGGCAAAGGCAAGAAAAA+GGG - chr2_1:79062858-79062877 None:intergenic 35.0%
! GTATTTCTCTAGTTTGGCAA+AGG - chr2_1:79062870-79062889 None:intergenic 35.0%
GAGATATTGAAGAGAGAAAG+AGG - chr2_1:79062904-79062923 None:intergenic 35.0%
CTAATCACTAATGGTCTGTT+TGG - chr2_1:79062949-79062968 None:intergenic 35.0%
CAAACAGACCATTAGTGATT+AGG + chr2_1:79062947-79062966 Msa0227790:intron 35.0%
TCTCAAGACCTAATCACTAA+TGG - chr2_1:79062958-79062977 None:intergenic 35.0%
ATGACTACTAGAAATTTGGG+AGG + chr2_1:79063116-79063135 Msa0227790:intron 35.0%
TGACTACTAGAAATTTGGGA+GGG + chr2_1:79063117-79063136 Msa0227790:intron 35.0%
CACATTCAACAATCACTACT+AGG - chr2_1:79063306-79063325 None:intergenic 35.0%
TGCACAATATATGTAGGGTT+GGG - chr2_1:79063446-79063465 None:intergenic 35.0%
TTGCACAATATATGTAGGGT+TGG - chr2_1:79063447-79063466 None:intergenic 35.0%
AACCCTACATATATTGTGCA+AGG + chr2_1:79063446-79063465 Msa0227790:intron 35.0%
GTACCTTGCACAATATATGT+AGG - chr2_1:79063452-79063471 None:intergenic 35.0%
ACATCTGAGTTAAATTCACG+TGG + chr2_1:79063475-79063494 Msa0227790:intron 35.0%
! TGCCCTTCTTTTTATACTAG+TGG + chr2_1:79063550-79063569 Msa0227790:intron 35.0%
ACAACAGCATTTAGTAAACC+AGG + chr2_1:79063608-79063627 Msa0227790:intron 35.0%
!! TTCCTTAACTTGTACCCTAA+GGG - chr2_1:79063706-79063725 None:intergenic 35.0%
!! ATTCCTTAACTTGTACCCTA+AGG - chr2_1:79063707-79063726 None:intergenic 35.0%
GGTTTCTAAATTGAGGAAAC+CGG - chr2_1:79064058-79064077 Msa0227800:three_prime_UTR 35.0%
GTGTGAAGGTTTCTAAATTG+AGG - chr2_1:79064065-79064084 Msa0227800:three_prime_UTR 35.0%
TGATAAGTGATTGTGTGTGA+AGG - chr2_1:79064079-79064098 Msa0227800:three_prime_UTR 35.0%
TTCCTCTAATTCGTATGCTA+TGG + chr2_1:79064383-79064402 Msa0227790:CDS 35.0%
AACCATAGCATACGAATTAG+AGG - chr2_1:79064388-79064407 Msa0227800:three_prime_UTR 35.0%
! CAGTCATGTACTTAAGTTGT+TGG + chr2_1:79064460-79064479 Msa0227790:intron 35.0%
! GTCATGTACTTAAGTTGTTG+GGG + chr2_1:79064462-79064481 Msa0227790:intron 35.0%
!! CCTTGATGGCTCTAATTATT+AGG - chr2_1:79064489-79064508 Msa0227800:intron 35.0%
CCTAATAATTAGAGCCATCA+AGG + chr2_1:79064486-79064505 Msa0227790:intron 35.0%
TCAAAACCAGACTCAAATAG+AGG + chr2_1:79064749-79064768 Msa0227790:intron 35.0%
TCTAATCCTCTATTTGAGTC+TGG - chr2_1:79064758-79064777 Msa0227800:intron 35.0%
AGTCCTATTAGTCATGATTG+TGG - chr2_1:79064806-79064825 Msa0227800:intron 35.0%
! GCAACACTTAACATTTTAGG+AGG + chr2_1:79064985-79065004 Msa0227790:intron 35.0%
ATGAGACAATACGTCAAACA+TGG + chr2_1:79065128-79065147 Msa0227790:intron 35.0%
CAGAGTATGAACTAGTTCAT+TGG - chr2_1:79065208-79065227 Msa0227800:intron 35.0%
CAATGAACTAGTTCATACTC+TGG + chr2_1:79065206-79065225 Msa0227790:intron 35.0%
TCTGGGAATATTAGCTAGTA+AGG + chr2_1:79065224-79065243 Msa0227790:intron 35.0%
TTAATCCTGAAGAAAACCAG+TGG + chr2_1:79065318-79065337 Msa0227790:intron 35.0%
GCCTTTATAATATTTGCCAC+TGG - chr2_1:79065337-79065356 Msa0227800:intron 35.0%
AGCAAAAACTCATAGATTGG+AGG + chr2_1:79065519-79065538 Msa0227790:intron 35.0%
ATCTCTCTTCAAATGTGAGT+TGG - chr2_1:79065566-79065585 Msa0227800:intron 35.0%
CACATTTGAAGAGAGATGAT+TGG + chr2_1:79065569-79065588 Msa0227790:intron 35.0%
AGTAAAAGTCGCACATTGAA+TGG + chr2_1:79065605-79065624 Msa0227790:intron 35.0%
! TATGTGGTGTCTAATTTGTG+TGG + chr2_1:79065698-79065717 Msa0227790:intron 35.0%
!! ATGTGTTGATGATCCAATTG+TGG + chr2_1:79065751-79065770 Msa0227790:intron 35.0%
CACAATGTTGATACCACAAT+TGG - chr2_1:79065767-79065786 Msa0227800:intron 35.0%
GAAATCCCAAATGAATGAGT+AGG + chr2_1:79065919-79065938 Msa0227790:intron 35.0%
ATGTGCCTACTCATTCATTT+GGG - chr2_1:79065927-79065946 Msa0227800:intron 35.0%
TATGTGCCTACTCATTCATT+TGG - chr2_1:79065928-79065947 Msa0227800:intron 35.0%
ATGAGTAGGCACATACTTAA+CGG + chr2_1:79065933-79065952 Msa0227790:intron 35.0%
TGCACCACATCTTTATCTAA+AGG - chr2_1:79066064-79066083 Msa0227800:intron 35.0%
! TTCTTTAGACATTGGTTAGG+AGG - chr2_1:79066531-79066550 Msa0227800:intron 35.0%
AGTGCTATGATAGATGTGAA+AGG + chr2_1:79066653-79066672 Msa0227790:intron 35.0%
TGATAGATGTGAAAGGTTTG+TGG + chr2_1:79066660-79066679 Msa0227790:intron 35.0%
! CTGGTATTTTCCCATTCTTT+GGG + chr2_1:79066880-79066899 Msa0227790:intron 35.0%
CTAATGAAATGCCCAAAGAA+TGG - chr2_1:79066894-79066913 Msa0227800:intron 35.0%
! AAGTCATGTACTTGAGTTGT+TGG + chr2_1:79067319-79067338 Msa0227790:intron 35.0%
! AGTCATGTACTTGAGTTGTT+GGG + chr2_1:79067320-79067339 Msa0227790:intron 35.0%
CTGAATTTGAGGGAAATTCA+AGG - chr2_1:79067423-79067442 Msa0227800:intron 35.0%
CTTGAATTTCCCTCAAATTC+AGG + chr2_1:79067421-79067440 Msa0227790:intron 35.0%
AGGATCAAGGAATATGCAGA+TGG + chr2_1:79057419-79057438 Msa0227790:CDS 40.0%
GGATTTCTCATCCCTCAATT+TGG - chr2_1:79057530-79057549 None:intergenic 40.0%
CCTTTCACTATCTTGATTCC+CGG + chr2_1:79057838-79057857 Msa0227790:intron 40.0%
! CTCTTTTGACACTGATGGAA+GGG - chr2_1:79057865-79057884 None:intergenic 40.0%
! AAGACCTCTTTTGACACTGA+TGG - chr2_1:79057870-79057889 None:intergenic 40.0%
TCAATCCAACTCCCCTTAAT+GGG - chr2_1:79059576-79059595 None:intergenic 40.0%
AAACCATAGGCTATGTCTAC+CGG - chr2_1:79059659-79059678 None:intergenic 40.0%
!! CTTGGTTTTCGAGAAACCAT+AGG - chr2_1:79059672-79059691 None:intergenic 40.0%
TTAGTTATCTAGCTAGCCCA+TGG + chr2_1:79059696-79059715 Msa0227790:intron 40.0%
GATGGAGTATAGAGGAGTAA+TGG - chr2_1:79059754-79059773 None:intergenic 40.0%
ATCAAGCTGGTATTTGTAGG+TGG + chr2_1:79059933-79059952 Msa0227790:CDS 40.0%
GTGTATTACGACCGAATAGA+TGG + chr2_1:79060422-79060441 Msa0227790:intron 40.0%
CCCTCTTACACAAATAGATC+TGG + chr2_1:79060668-79060687 Msa0227790:intron 40.0%
CCCAGATCTATTTGTGTAAG+AGG - chr2_1:79060672-79060691 None:intergenic 40.0%
! TGCTACATCAGTGCTGAAAT+TGG + chr2_1:79060793-79060812 Msa0227790:intron 40.0%
! GCTACATCAGTGCTGAAATT+GGG + chr2_1:79060794-79060813 Msa0227790:intron 40.0%
AATTCAGATGAAGACCGTGT+TGG + chr2_1:79060898-79060917 Msa0227790:intron 40.0%
GTGCATGTCATTCTTAGAAG+AGG + chr2_1:79061001-79061020 Msa0227790:intron 40.0%
GCTCATTCGTTAAAGTGTGT+TGG + chr2_1:79061070-79061089 Msa0227790:intron 40.0%
!! AAAGTGTGTTGGCTTTGAAG+AGG + chr2_1:79061081-79061100 Msa0227790:intron 40.0%
TACCTCCGTCCCTAATTATA+GGG + chr2_1:79061329-79061348 Msa0227790:intron 40.0%
GCCAAGAGCTCAATTAATTC+GGG + chr2_1:79061651-79061670 Msa0227790:intron 40.0%
TCCCGAATTAATTGAGCTCT+TGG - chr2_1:79061655-79061674 None:intergenic 40.0%
AGAGCTCAATTAATTCGGGA+CGG + chr2_1:79061655-79061674 Msa0227790:intron 40.0%
!!! AGTGTTTTTAGACAGCTTGG+AGG + chr2_1:79061893-79061912 Msa0227790:intron 40.0%
!!! CGTGATTGGCTTTTATAGAC+AGG - chr2_1:79062151-79062170 None:intergenic 40.0%
!! CAATCACGTTTCTGAAGCAA+GGG + chr2_1:79062163-79062182 Msa0227790:intron 40.0%
AGGATCGACTATTAGATGGT+TGG - chr2_1:79062256-79062275 None:intergenic 40.0%
! TTGGAGGGTATAAAAGGCAA+AGG + chr2_1:79062745-79062764 Msa0227790:intron 40.0%
! TGGAGGGTATAAAAGGCAAA+GGG + chr2_1:79062746-79062765 Msa0227790:intron 40.0%
CTCCTCTTTCTTCGCTTATA+TGG + chr2_1:79062786-79062805 Msa0227790:intron 40.0%
CCTCTTTCTTCGCTTATATG+GGG + chr2_1:79062788-79062807 Msa0227790:intron 40.0%
! GAAGAGAGATAAGTTTTGCG+TGG - chr2_1:79062836-79062855 None:intergenic 40.0%
GTTTGGCAAAGGCAAGAAAA+AGG - chr2_1:79062859-79062878 None:intergenic 40.0%
AGAGAAAGAGGAGAGAAGTA+TGG - chr2_1:79062892-79062911 None:intergenic 40.0%
GACTACTAGAAATTTGGGAG+GGG + chr2_1:79063118-79063137 Msa0227790:intron 40.0%
GCACAATATATGTAGGGTTG+GGG - chr2_1:79063445-79063464 None:intergenic 40.0%
TCTGAGTTAAATTCACGTGG+TGG + chr2_1:79063478-79063497 Msa0227790:intron 40.0%
AGCATTTAGTAAACCAGGAC+AGG + chr2_1:79063613-79063632 Msa0227790:intron 40.0%
! TCTTGTTATCTTGTGCCCTT+AGG + chr2_1:79063688-79063707 Msa0227790:intron 40.0%
! CTTGTTATCTTGTGCCCTTA+GGG + chr2_1:79063689-79063708 Msa0227790:intron 40.0%
ACAAGATGTAAGCGTGTTAG+TGG + chr2_1:79063868-79063887 Msa0227790:intron 40.0%
CAAGATGTAAGCGTGTTAGT+GGG + chr2_1:79063869-79063888 Msa0227790:intron 40.0%
CAAAAGTTTGGGAAAACCAG+TGG - chr2_1:79064034-79064053 Msa0227800:three_prime_UTR 40.0%
!!! CACTGGTTTTCCCAAACTTT+TGG + chr2_1:79064032-79064051 Msa0227790:intron 40.0%
ACAAGAAGCAAAGCAATCAG+AGG + chr2_1:79064425-79064444 Msa0227790:CDS 40.0%
AGCAATCAGAGGAATCTTTG+AGG + chr2_1:79064436-79064455 Msa0227790:CDS 40.0%
AAAACGATGTTTCAGCTCAG+AGG - chr2_1:79064707-79064726 Msa0227800:intron 40.0%
ATCTACATAACCACCTTTGC+TGG + chr2_1:79064780-79064799 Msa0227790:intron 40.0%
TGGCCACAATCATGACTAAT+AGG + chr2_1:79064800-79064819 Msa0227790:intron 40.0%
AGACGGTTCAATTCCTTCTT+TGG + chr2_1:79065030-79065049 Msa0227790:intron 40.0%
GCTCTATTAAGACCCTCAAA+AGG + chr2_1:79065182-79065201 Msa0227790:intron 40.0%
!!! CTAGTTCATTGGCCTTTTGA+GGG - chr2_1:79065197-79065216 Msa0227800:intron 40.0%
!!! ACTAGTTCATTGGCCTTTTG+AGG - chr2_1:79065198-79065217 Msa0227800:intron 40.0%
TTAGCTAGTAAGGCCATATG+AGG + chr2_1:79065234-79065253 Msa0227790:intron 40.0%
!!! ATTTGCCACTGGTTTTCTTC+AGG - chr2_1:79065326-79065345 Msa0227800:intron 40.0%
TATGGCTAGAAGTCCATATG+AGG + chr2_1:79065389-79065408 Msa0227790:intron 40.0%
TTGTCACATGACGTATCTTG+TGG - chr2_1:79065438-79065457 Msa0227800:intron 40.0%
TCGCACATTGAATGGAAAAG+TGG + chr2_1:79065613-79065632 Msa0227790:intron 40.0%
TTCTTGAGAATATGGTGGTC+AGG + chr2_1:79065819-79065838 Msa0227790:intron 40.0%
TGAGTAGGCACATACTTAAC+GGG + chr2_1:79065934-79065953 Msa0227790:intron 40.0%
ATACTTAACGGGGAGATTGT+TGG + chr2_1:79065945-79065964 Msa0227790:intron 40.0%
! GTTAGTGGTTTTCTAGACTG+TGG - chr2_1:79066837-79066856 Msa0227800:intron 40.0%
AGCTGTTGATACTCTGTTAG+TGG - chr2_1:79066852-79066871 Msa0227800:intron 40.0%
CCAAAGAATGGGAAAATACC+AGG - chr2_1:79066882-79066901 Msa0227800:intron 40.0%
! CCTGGTATTTTCCCATTCTT+TGG + chr2_1:79066879-79066898 Msa0227790:intron 40.0%
TTGATGAAGAAGAGTGAAGG+AGG - chr2_1:79066958-79066977 Msa0227800:intron 40.0%
!! TGGTTGATGAAGAAGAGTGA+AGG - chr2_1:79066961-79066980 Msa0227800:intron 40.0%
AGAAGAAGAAGAAGAGGAAG+AGG - chr2_1:79067235-79067254 Msa0227800:intron 40.0%
CTCTTCTTCTTCTTCTGCTT+CGG + chr2_1:79067239-79067258 Msa0227790:CDS 40.0%
AGAGAATGCAAAGCAATCAG+AGG + chr2_1:79067284-79067303 Msa0227790:CDS 40.0%
AGCAATCAGAGGAATCTTTG+AGG + chr2_1:79064436-79064455 Msa0227790:CDS 40.0%
! GTCATGTACTTGAGTTGTTG+GGG + chr2_1:79067321-79067340 Msa0227790:intron 40.0%
AACAGTTCATCACGCAAGAA+TGG - chr2_1:79067916-79067935 Msa0227800:intron 40.0%
ATTCTTGCGTGATGAACTGT+TGG + chr2_1:79067915-79067934 Msa0227790:CDS 40.0%
AGAACGACAAAATGGAGGAT+AGG - chr2_1:79067943-79067962 Msa0227800:intron 40.0%
! TATCCTCCATTTTGTCGTTC+TGG + chr2_1:79067942-79067961 Msa0227790:CDS 40.0%
! ATCCTCCATTTTGTCGTTCT+GGG + chr2_1:79067943-79067962 Msa0227790:CDS 40.0%
TGGAGTGTAGCAACAAGTGT+TGG + chr2_1:79057379-79057398 Msa0227790:CDS 45.0%
!! TGTAGCAACAAGTGTTGGAG+TGG + chr2_1:79057384-79057403 Msa0227790:CDS 45.0%
TTCTCAAAGATTCCTCCGAC+TGG - chr2_1:79057555-79057574 None:intergenic 45.0%
TGTCATGTTCTTGAGCTGCT+GGG + chr2_1:79057576-79057595 Msa0227790:CDS 45.0%
CCGGGAATCAAGATAGTGAA+AGG - chr2_1:79057841-79057860 None:intergenic 45.0%
! CCTCTTTTGACACTGATGGA+AGG - chr2_1:79057866-79057885 None:intergenic 45.0%
CCTTCCATCAGTGTCAAAAG+AGG + chr2_1:79057863-79057882 Msa0227790:intron 45.0%
CTCTTGGACATAAAGCAGAG+AGG + chr2_1:79058482-79058501 Msa0227790:intron 45.0%
TCCAATCTTCCAATGAGGTG+AGG + chr2_1:79058785-79058804 Msa0227790:intron 45.0%
CCAATCTTCCAATGAGGTGA+GGG + chr2_1:79058786-79058805 Msa0227790:intron 45.0%
CTCAATCCAACTCCCCTTAA+TGG - chr2_1:79059577-79059596 None:intergenic 45.0%
GAGTGAACGTAACGACAAAG+TGG + chr2_1:79059594-79059613 Msa0227790:intron 45.0%
!!! TAGGCTATGTCTACCGGTTT+TGG - chr2_1:79059653-79059672 None:intergenic 45.0%
AAACCGGTAGACATAGCCTA+TGG + chr2_1:79059653-79059672 Msa0227790:intron 45.0%
!! GAGGCTTTGAAAGATCAAGC+TGG + chr2_1:79059920-79059939 Msa0227790:CDS 45.0%
GGATGAGAAGAAGGCAAAAC+AGG + chr2_1:79060060-79060079 Msa0227790:CDS 45.0%
CAAGTACATGACAGTCCTCA+AGG - chr2_1:79060095-79060114 None:intergenic 45.0%
TGTCATGTACTTGAGCTGCT+GGG + chr2_1:79060102-79060121 Msa0227790:intron 45.0%
CACGAGTACAAACCAAGATG+TGG - chr2_1:79060343-79060362 None:intergenic 45.0%
! CTCAGTTAATCTAGGACGGA+GGG - chr2_1:79061140-79061159 None:intergenic 45.0%
! ACTCAGTTAATCTAGGACGG+AGG - chr2_1:79061141-79061160 None:intergenic 45.0%
CTACCTCCGTCCCTAATTAT+AGG + chr2_1:79061328-79061347 Msa0227790:intron 45.0%
AAGGGCCCTATAATTAGGGA+CGG - chr2_1:79061337-79061356 None:intergenic 45.0%
! GGTCTTATAATTAGGGACGG+AGG + chr2_1:79061597-79061616 Msa0227790:intron 45.0%
CTCAATTAATTCGGGACGGA+GGG + chr2_1:79061659-79061678 Msa0227790:intron 45.0%
GGTTGTATGATTGTCGCAAG+AGG + chr2_1:79061808-79061827 Msa0227790:intron 45.0%
!! GAAGCATCATACCACGGTTT+TGG + chr2_1:79062093-79062112 Msa0227790:intron 45.0%
CCTTGCTTCAGAAACGTGAT+TGG - chr2_1:79062165-79062184 None:intergenic 45.0%
!! CCAATCACGTTTCTGAAGCA+AGG + chr2_1:79062162-79062181 Msa0227790:intron 45.0%
CCCCATATAAGCGAAGAAAG+AGG - chr2_1:79062791-79062810 None:intergenic 45.0%
GGGAGAACAAAAAAACGCGT+GGG + chr2_1:79062808-79062827 Msa0227790:intron 45.0%
! ATTTTGCCGGCAGACATATC+AGG + chr2_1:79063516-79063535 Msa0227790:intron 45.0%
! TTTTGCCGGCAGACATATCA+GGG + chr2_1:79063517-79063536 Msa0227790:intron 45.0%
ACAACTGTATAGTCCTGTCC+TGG - chr2_1:79063629-79063648 None:intergenic 45.0%
TGCCCTTAGGGTACAAGTTA+AGG + chr2_1:79063701-79063720 Msa0227790:intron 45.0%
!!! CTGGTTTTGGTGGAAACCAA+TGG - chr2_1:79063991-79064010 Msa0227800:three_prime_UTR 45.0%
! GGTTTTCCCAAACTTTTGGC+CGG + chr2_1:79064036-79064055 Msa0227790:intron 45.0%
AGGAAACCGGCCAAAAGTTT+GGG - chr2_1:79064045-79064064 Msa0227800:three_prime_UTR 45.0%
GTGGAAGCCTTAAAAGACCA+AGG + chr2_1:79064273-79064292 Msa0227790:CDS 45.0%
!! GCACAAGCCTTGGTCTTTTA+AGG - chr2_1:79064283-79064302 Msa0227800:three_prime_UTR 45.0%
TAAAAGACCAAGGCTTGTGC+AGG + chr2_1:79064283-79064302 Msa0227790:CDS 45.0%
TCATCCTAATAGGCCCTTGA+TGG - chr2_1:79064503-79064522 Msa0227800:intron 45.0%
AGGTACTAACAACCGAGAGA+CGG + chr2_1:79065013-79065032 Msa0227790:intron 45.0%
GAAGGAATTGAACCGTCTCT+CGG - chr2_1:79065028-79065047 Msa0227800:intron 45.0%
TACCTCACTTCTGCCTCATA+TGG - chr2_1:79065250-79065269 Msa0227800:intron 45.0%
ATATGAGGCAGAAGTGAGGT+AGG + chr2_1:79065249-79065268 Msa0227790:intron 45.0%
TACCTCACTTCTGCCTCATA+TGG - chr2_1:79065250-79065269 Msa0227800:intron 45.0%
ATATGAGGCAGAAGTGAGGT+AGG + chr2_1:79065249-79065268 Msa0227790:intron 45.0%
GAGTAGGCACATACTTAACG+GGG + chr2_1:79065935-79065954 Msa0227790:intron 45.0%
TATCAACAGCTTTCAGCACC+TGG + chr2_1:79066861-79066880 Msa0227790:intron 45.0%
TGAGTTCAACAAGCAGAGCA+TGG + chr2_1:79067073-79067092 Msa0227790:intron 45.0%
GAGTTCAACAAGCAGAGCAT+GGG + chr2_1:79067074-79067093 Msa0227790:intron 45.0%
CGAAGCAGAAGAAGAAGAAG+AGG - chr2_1:79067241-79067260 Msa0227800:intron 45.0%
!!! TATTCATTTATAATTTTTAA+TGG - chr2_1:79059344-79059363 None:intergenic 5.0%
TGAGTTCAAGAAGCCGAGCA+TGG + chr2_1:79057353-79057372 Msa0227790:CDS 50.0%
CTACACTCCATGTCCATGCT+CGG - chr2_1:79057369-79057388 None:intergenic 50.0%
!! AGCAACAAGTGTTGGAGTGG+TGG + chr2_1:79057387-79057406 Msa0227790:CDS 50.0%
!! AACAAGTGTTGGAGTGGTGG+AGG + chr2_1:79057390-79057409 Msa0227790:CDS 50.0%
!! GTGGAGGCTTTGAAGGATCA+AGG + chr2_1:79057406-79057425 Msa0227790:CDS 50.0%
GGATGAGAAATCCAGCCAGT+CGG + chr2_1:79057537-79057556 Msa0227790:CDS 50.0%
CTGTCATGTTCTTGAGCTGC+TGG + chr2_1:79057575-79057594 Msa0227790:CDS 50.0%
GTCATGTTCTTGAGCTGCTG+GGG + chr2_1:79057577-79057596 Msa0227790:CDS 50.0%
TTGACACTGATGGAAGGGTC+CGG - chr2_1:79057860-79057879 None:intergenic 50.0%
GAGTGCAGAGCCCTACAATT+TGG - chr2_1:79058189-79058208 None:intergenic 50.0%
CCCTCACCTCATTGGAAGAT+TGG - chr2_1:79058789-79058808 None:intergenic 50.0%
AAGGACCCATTAAGGGGAGT+TGG + chr2_1:79059568-79059587 Msa0227790:intron 50.0%
CAACAGCAACAAGCAAAGCC+TGG + chr2_1:79059870-79059889 Msa0227790:intron 50.0%
AGCAACAAGCAAAGCCTGGA+TGG + chr2_1:79059874-79059893 Msa0227790:intron 50.0%
AACAAGCAAAGCCTGGATGG+TGG + chr2_1:79059877-79059896 Msa0227790:CDS 50.0%
!! TGCAAGTGTTGGAGTTGTGG+AGG + chr2_1:79059901-79059920 Msa0227790:CDS 50.0%
GAAGAAGGCAAAACAGGCAG+AGG + chr2_1:79060066-79060085 Msa0227790:CDS 50.0%
AACAGGCAGAGGAATCCTTG+AGG + chr2_1:79060077-79060096 Msa0227790:CDS 50.0%
CTGTCATGTACTTGAGCTGC+TGG + chr2_1:79060101-79060120 Msa0227790:intron 50.0%
GTCATGTACTTGAGCTGCTG+GGG + chr2_1:79060103-79060122 Msa0227790:intron 50.0%
! TCTAGGACGGAGGGAGTAAT+TGG - chr2_1:79061131-79061150 None:intergenic 50.0%
GCTCAATTAATTCGGGACGG+AGG + chr2_1:79061658-79061677 Msa0227790:intron 50.0%
GACGGAGGGAGTAGTTCTTA+AGG + chr2_1:79061673-79061692 Msa0227790:intron 50.0%
!! ACCACGGTTTTGGTACATCG+TGG + chr2_1:79062103-79062122 Msa0227790:intron 50.0%
GTACATCGTGGCACGATTAC+AGG + chr2_1:79062115-79062134 Msa0227790:intron 50.0%
GGGGAGAACAAAAAAACGCG+TGG + chr2_1:79062807-79062826 Msa0227790:intron 50.0%
GACTACCCTGATATGTCTGC+CGG - chr2_1:79063525-79063544 None:intergenic 50.0%
!!! TAGCTAGCTGCTGGTTTTGG+TGG - chr2_1:79064001-79064020 Msa0227800:three_prime_UTR 50.0%
!!! AGGTAGCTAGCTGCTGGTTT+TGG - chr2_1:79064004-79064023 Msa0227800:three_prime_UTR 50.0%
ATGATGAGGTAGCTAGCTGC+TGG - chr2_1:79064010-79064029 Msa0227800:three_prime_UTR 50.0%
TAGCTACCTCATCATGCCAC+TGG + chr2_1:79064015-79064034 Msa0227790:intron 50.0%
GGAAAACCAGTGGCATGATG+AGG - chr2_1:79064024-79064043 Msa0227800:three_prime_UTR 50.0%
GAGGAAACCGGCCAAAAGTT+TGG - chr2_1:79064046-79064065 Msa0227800:three_prime_UTR 50.0%
TGGACAGTTGCAGCAAGTGT+TGG + chr2_1:79064246-79064265 Msa0227790:CDS 50.0%
!! TGCAGCAAGTGTTGGAGTTG+TGG + chr2_1:79064254-79064273 Msa0227790:CDS 50.0%
AATTCCACCTGCACAAGCCT+TGG - chr2_1:79064293-79064312 Msa0227800:three_prime_UTR 50.0%
AGAGCCATCAAGGGCCTATT+AGG + chr2_1:79064496-79064515 Msa0227790:intron 50.0%
GGCATCAAGCACAACAATGC+AGG - chr2_1:79064686-79064705 Msa0227800:intron 50.0%
ATGATTGTGGCCAGCAAAGG+TGG - chr2_1:79064793-79064812 Msa0227800:intron 50.0%
GTCATGATTGTGGCCAGCAA+AGG - chr2_1:79064796-79064815 Msa0227800:intron 50.0%
GTCCATATGAGGCAGAAGTG+AGG + chr2_1:79065400-79065419 Msa0227790:intron 50.0%
AGTCTTGCTTGTGTGGCAAC+TGG + chr2_1:79066297-79066316 Msa0227790:intron 50.0%
CAAGAAGCCGAGCATGGACA+TGG + chr2_1:79057359-79057378 Msa0227790:CDS 55.0%
! TGGAGTGGTGGAGGCTTTGA+AGG + chr2_1:79057399-79057418 Msa0227790:CDS 55.0%
TGAGAAATCCAGCCAGTCGG+AGG + chr2_1:79057540-79057559 Msa0227790:CDS 55.0%
CAAAGATTCCTCCGACTGGC+TGG - chr2_1:79057551-79057570 None:intergenic 55.0%
TGACACTGATGGAAGGGTCC+GGG - chr2_1:79057859-79057878 None:intergenic 55.0%
AACACTTGCAGCCACCATCC+AGG - chr2_1:79059891-79059910 None:intergenic 55.0%
! TGGATGGTGGCTGCAAGTGT+TGG + chr2_1:79059890-79059909 Msa0227790:CDS 55.0%
!! GGCTGCAAGTGTTGGAGTTG+TGG + chr2_1:79059898-79059917 Msa0227790:CDS 55.0%
GGCCCTATAATTAGGGACGG+AGG - chr2_1:79061334-79061353 None:intergenic 55.0%
GCCACGATGTACCAAAACCG+TGG - chr2_1:79062107-79062126 None:intergenic 55.0%
AAGACCAAGGCTTGTGCAGG+TGG + chr2_1:79064286-79064305 Msa0227790:CDS 55.0%
GGCCATATGAGGCAGAAGTG+AGG + chr2_1:79065245-79065264 Msa0227790:intron 55.0%
GAGGCAGAAGTGAGGTAGGT+TGG + chr2_1:79065253-79065272 Msa0227790:intron 55.0%
GAGGCAGAAGTGAGGTAGGT+TGG + chr2_1:79065253-79065272 Msa0227790:intron 55.0%
GGCCCAGAACGACAAAATGG+AGG - chr2_1:79067948-79067967 Msa0227800:intron 55.0%
CTCGGCCCAGAACGACAAAA+TGG - chr2_1:79067951-79067970 Msa0227800:intron 55.0%
!! CATTTTGTCGTTCTGGGCCG+AGG + chr2_1:79067949-79067968 Msa0227790:CDS 55.0%
GCGAGTTGCCCTCACCTCAT+TGG - chr2_1:79058797-79058816 None:intergenic 60.0%
AGCAGAGCATGGGTAGCTGC+AGG + chr2_1:79067084-79067103 Msa0227790:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 79057352 79067981 79057352 ID=Msa0227790;Name=Msa0227790
chr2_1 mRNA 79057352 79067981 79057352 ID=Msa0227790-mRNA-1;Parent=Msa0227790;Name=Msa0227790-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.8|0|0|5|0|339
chr2_1 exon 79057352 79057598 79057352 ID=Msa0227790-mRNA-1:exon:24065;Parent=Msa0227790-mRNA-1
chr2_1 exon 79059876 79060107 79059876 ID=Msa0227790-mRNA-1:exon:24066;Parent=Msa0227790-mRNA-1
chr2_1 exon 79064242 79064466 79064242 ID=Msa0227790-mRNA-1:exon:24067;Parent=Msa0227790-mRNA-1
chr2_1 exon 79067089 79067325 79067089 ID=Msa0227790-mRNA-1:exon:24068;Parent=Msa0227790-mRNA-1
chr2_1 exon 79067903 79067981 79067903 ID=Msa0227790-mRNA-1:exon:24069;Parent=Msa0227790-mRNA-1
chr2_1 CDS 79057352 79057598 79057352 ID=Msa0227790-mRNA-1:cds;Parent=Msa0227790-mRNA-1
chr2_1 CDS 79059876 79060107 79059876 ID=Msa0227790-mRNA-1:cds;Parent=Msa0227790-mRNA-1
chr2_1 CDS 79064242 79064466 79064242 ID=Msa0227790-mRNA-1:cds;Parent=Msa0227790-mRNA-1
chr2_1 CDS 79067089 79067325 79067089 ID=Msa0227790-mRNA-1:cds;Parent=Msa0227790-mRNA-1
chr2_1 CDS 79067903 79067981 79067903 ID=Msa0227790-mRNA-1:cds;Parent=Msa0227790-mRNA-1
Gene Sequence

>Msa0227790

ATGAGTTCAAGAAGCCGAGCATGGACATGGAGTGTAGCAACAAGTGTTGGAGTGGTGGAGGCTTTGAAGGATCAAGGAATATGCAGATGGAACAGTGTTATAAGATCAGCACAACAACATGCTAAACATAATATCAGGTCTTTGTCTCATGCCAACAACAAAATTTCTTCTTCAACCAAATTGAGGGATGAGAAATCCAGCCAGTCGGAGGAATCTTTGAGAACTGTCATGTTCTTGAGCTGCTGGGCAACAAGCAAAGCCTGGATGGTGGCTGCAAGTGTTGGAGTTGTGGAGGCTTTGAAAGATCAAGCTGGTATTTGTAGGTGGAACTATGCTTTAAGACAAGCTCAACAACATCTTAAAAACCGTGTTAAATCAATGTCTCAAGCAAAGAATTTCTCTTCTTCTCCACTTATTGCTAGCAAATTTAAGGATGAGAAGAAGGCAAAACAGGCAGAGGAATCCTTGAGGACTGTCATAATTTGGACAGTTGCAGCAAGTGTTGGAGTTGTGGAAGCCTTAAAAGACCAAGGCTTGTGCAGGTGGAATTGTGCTTTAAGATCAGCTCAACATCATGTTAAACATCATTTGAGATCTTTGTCTCAAGCAAACAAGATTTCTTCCTCTAATTCGTATGCTATGGTTTCTAGTAGATTAGAGGAACAAGAAGCAAAGCAATCAGAGGAATCTTTGAGGACAGTCATAGCATGGGTAGCTGCAGGTAGTGTTGCAGTTGTAGAAGCATTAAAAGATCAAGGAATATGTAGATGGAATCATACTCTAAAGTCACTTCAAAATCATGTCAAATACAATGTGAGATCGTTTTCTCAAGCAAAGAAGCTTTCATCCTCTTCCTCTTCTTCTTCTTCTGCTTCGGTTTCTATTTCTCACAGAGAAAAAGAGAATGCAAAGCAATCAGAGGAATCTTTGAGGAAAGTCATTTCAATGAGTCCATTCTTGCGTGATGAACTGTTGGCACCTATCCTCCATTTTGTCGTTCTGGGCCGAGGAGATTATTAA
Protein sequence

>Msa0227790

MSSRSRAWTWSVATSVGVVEALKDQGICRWNSVIRSAQQHAKHNIRSLSHANNKISSSTKLRDEKSSQSEESLRTVMFLSCWATSKAWMVAASVGVVEALKDQAGICRWNYALRQAQQHLKNRVKSMSQAKNFSSSPLIASKFKDEKKAKQAEESLRTVIIWTVAASVGVVEALKDQGLCRWNCALRSAQHHVKHHLRSLSQANKISSSNSYAMVSSRLEEQEAKQSEESLRTVIAWVAAGSVAVVEALKDQGICRWNHTLKSLQNHVKYNVRSFSQAKKLSSSSSSSSSASVSISHREKENAKQSEESLRKVISMSPFLRDELLAPILHFVVLGRGDY*