Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220650 | KEH39126.1 | 86.923 | 390 | 11 | 5 | 1 | 357 | 1 | 383 | 0.0 | 677 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220650 | A0A072VBY4 | 86.923 | 390 | 11 | 5 | 1 | 357 | 1 | 383 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0220650 | Msa0299800 | 0.895924 | 6.035617e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220650 | MtrunA17_Chr2g0324301 | 86.911 | 382 | 10 | 5 | 1 | 349 | 1 | 375 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220650 | AT1G03687.1 | 60.534 | 337 | 101 | 4 | 43 | 349 | 39 | 373 | 6.22e-144 | 412 |
| Msa0220650 | AT1G03687.2 | 56.777 | 273 | 86 | 4 | 43 | 285 | 39 | 309 | 1.94e-106 | 315 |
Find 69 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCCTGGAATAAAATTT+TGG | 0.174919 | 2_1:+69064194 | Msa0220650:CDS |
| TGTGCAACTTTGTGCCTTTA+TGG | 0.186040 | 2_1:+69064398 | Msa0220650:CDS |
| CGCTGCTGCTGGCCTGCTCT+TGG | 0.224629 | 2_1:+69068651 | Msa0220650:CDS |
| TGAGAGACCTGCCAGTTTAA+AGG | 0.232795 | 2_1:-69064453 | None:intergenic |
| AGGATCAAGCGAAGTCAATT+TGG | 0.238713 | 2_1:+69068397 | Msa0220650:intron |
| CACATGATTTGTTCATGTTC+AGG | 0.250834 | 2_1:-69064425 | None:intergenic |
| CAGCATTCTTGTTGGGATAA+AGG | 0.261224 | 2_1:-69064771 | None:intergenic |
| TCCCAACAAGAATGCTGTTT+TGG | 0.276901 | 2_1:+69064777 | Msa0220650:CDS |
| GAATCAGTTGAAAATGCTTT+TGG | 0.285733 | 2_1:+69064799 | Msa0220650:CDS |
| ACATCCTCTTTGCTCTTTCC+TGG | 0.291974 | 2_1:+69064181 | Msa0220650:CDS |
| GAAAATGGCTACTACTATAT+TGG | 0.331427 | 2_1:+69062852 | None:intergenic |
| GGATCAAGCGAAGTCAATTT+GGG | 0.337508 | 2_1:+69068398 | Msa0220650:intron |
| CATGTGGAATTCCTTTAAAC+TGG | 0.337625 | 2_1:+69064442 | Msa0220650:CDS |
| GAAGCACCGTGCAACTTATA+AGG | 0.352805 | 2_1:+69063356 | Msa0220650:CDS |
| TTCAGCTGAAATGGATAAAC+AGG | 0.359225 | 2_1:+69068699 | Msa0220650:CDS |
| GCAATTCAGCAGCAATGTTT+AGG | 0.361486 | 2_1:+69065694 | Msa0220650:CDS |
| TGAGAGTGGCGAATTGGAAT+AGG | 0.375592 | 2_1:-69062962 | None:intergenic |
| GAGGTTTAGTTCAGCTGAAA+TGG | 0.379797 | 2_1:+69068690 | Msa0220650:CDS |
| TGTACAGCAGCCGCTGCTGC+TGG | 0.394872 | 2_1:+69068640 | Msa0220650:CDS |
| GCGATTTGGGTGACCATAGC+TGG | 0.400102 | 2_1:-69063066 | None:intergenic |
| GATACTTCATTATTTGCAAC+TGG | 0.402551 | 2_1:-69064829 | None:intergenic |
| CCAACCTTGCCATTCTTGTA+AGG | 0.404114 | 2_1:-69063025 | None:intergenic |
| TCCAAAACAGCATTCTTGTT+GGG | 0.416746 | 2_1:-69064778 | None:intergenic |
| TACAGAGGCTTCAAGTTTCA+AGG | 0.419131 | 2_1:+69068962 | Msa0220650:intron |
| CTTACAAGAATGGCAAGGTT+GGG | 0.427117 | 2_1:+69063026 | Msa0220650:CDS |
| GACAACAGCGTCGTCGTTCA+TGG | 0.428853 | 2_1:-69063001 | None:intergenic |
| CAAATAGCTTGTCGTGTACT+TGG | 0.429722 | 2_1:+69063423 | Msa0220650:CDS |
| AGCAATGTTTAGGCGCCTTC+AGG | 0.438148 | 2_1:+69065704 | Msa0220650:CDS |
| TGTTGTTGAGAGTGGCGAAT+TGG | 0.442979 | 2_1:-69062968 | None:intergenic |
| GGGCAGGCCTCAACCATCTT+GGG | 0.460650 | 2_1:+69068609 | Msa0220650:intron |
| AGGGCAGGCCTCAACCATCT+TGG | 0.465462 | 2_1:+69068608 | Msa0220650:intron |
| CCTTACAAGAATGGCAAGGT+TGG | 0.469429 | 2_1:+69063025 | Msa0220650:CDS |
| CACAAAGAGACGACTTCGAA+TGG | 0.476866 | 2_1:+69068765 | Msa0220650:CDS |
| TTCCAAAACAGCATTCTTGT+TGG | 0.476920 | 2_1:-69064779 | None:intergenic |
| TGGAATTCCTTTAAACTGGC+AGG | 0.481223 | 2_1:+69064446 | Msa0220650:CDS |
| CATGTTCAGGAATGCCATAA+AGG | 0.486797 | 2_1:-69064412 | None:intergenic |
| TATTGGTGTCATCAAATCCT+TGG | 0.489533 | 2_1:+69062869 | Msa0220650:CDS |
| GTAGGTGGAGCTCCAAGAGC+AGG | 0.491772 | 2_1:-69068663 | None:intergenic |
| TTTGTAGTGCTGGCTTGCTA+TGG | 0.497959 | 2_1:+69064135 | Msa0220650:intron |
| CTCTCACCTGAGTTTATGCA+TGG | 0.503816 | 2_1:-69068466 | None:intergenic |
| TAATGAAGTATCATCAGAAA+AGG | 0.511233 | 2_1:+69064840 | Msa0220650:CDS |
| CAAAGGTTATCTTTGTCAGA+AGG | 0.516657 | 2_1:+69063449 | Msa0220650:CDS |
| CAAGAGCAGGCCAGCAGCAG+CGG | 0.520561 | 2_1:-69068650 | None:intergenic |
| TTATGCATGGCAGAAGTACC+AGG | 0.524465 | 2_1:-69068453 | None:intergenic |
| TCTTGTATATCGCTAAATCC+TGG | 0.525128 | 2_1:+69068435 | Msa0220650:CDS |
| CTGTTGTCTCCTTACAAGAA+TGG | 0.526241 | 2_1:+69063016 | Msa0220650:CDS |
| TTACAAGAATGGCAAGGTTG+GGG | 0.538692 | 2_1:+69063027 | Msa0220650:CDS |
| ACAAAGAGACGACTTCGAAT+GGG | 0.546696 | 2_1:+69068766 | Msa0220650:CDS |
| TGGGTGACCATAGCTGGAAC+TGG | 0.551282 | 2_1:-69063060 | None:intergenic |
| AACATCACCAGTTCCAGCTA+TGG | 0.553572 | 2_1:+69063053 | Msa0220650:CDS |
| CTGAACTAAACCTCGGAAGT+AGG | 0.573085 | 2_1:-69068681 | None:intergenic |
| TTGGTTATATATGCATCCCA+AGG | 0.580805 | 2_1:+69064213 | Msa0220650:CDS |
| TGGAGCTCCACCTACTTCCG+AGG | 0.587727 | 2_1:+69068671 | Msa0220650:CDS |
| GTGCGATCCCAAGATGGTTG+AGG | 0.588081 | 2_1:-69068616 | None:intergenic |
| GATTTAGCGATATACAAGAA+AGG | 0.591739 | 2_1:-69068431 | None:intergenic |
| GAAGTCAATTTGGGGAGATG+AGG | 0.600051 | 2_1:+69068407 | Msa0220650:CDS |
| CTGAACATGAACAAATCATG+TGG | 0.603947 | 2_1:+69064426 | Msa0220650:CDS |
| CTAAAGCCTTATAAGTTGCA+CGG | 0.607126 | 2_1:-69063362 | None:intergenic |
| TGTCGTGTACTTGGTAGCAA+AGG | 0.612150 | 2_1:+69063432 | Msa0220650:CDS |
| AACTAAACCTCGGAAGTAGG+TGG | 0.612586 | 2_1:-69068678 | None:intergenic |
| GTCTCCTTACAAGAATGGCA+AGG | 0.637136 | 2_1:+69063021 | Msa0220650:CDS |
| CTTCTGCCATGCATAAACTC+AGG | 0.637795 | 2_1:+69068460 | Msa0220650:CDS |
| AATTGGAATAGGAATTGTAA+CGG | 0.651432 | 2_1:-69062951 | None:intergenic |
| TATTCCAGGAAAGAGCAAAG+AGG | 0.652194 | 2_1:-69064185 | None:intergenic |
| ATTTCAGCTGAACTAAACCT+CGG | 0.661199 | 2_1:-69068688 | None:intergenic |
| GATCAAGCGAAGTCAATTTG+GGG | 0.667499 | 2_1:+69068399 | Msa0220650:CDS |
| GTACATGTGCGATCCCAAGA+TGG | 0.674168 | 2_1:-69068622 | None:intergenic |
| AGAGACGACTTCGAATGGGA+AGG | 0.693993 | 2_1:+69068770 | Msa0220650:CDS |
| ATTCAGGAAGAAGTAATGTG+TGG | 0.772031 | 2_1:+69064746 | Msa0220650:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACATTTCTTATATTATTT+TGG | - | chr2_1:69064625-69064644 | None:intergenic | 10.0% |
| !! | ATTAATATTATATACTTCAT+AGG | - | chr2_1:69065361-69065380 | None:intergenic | 10.0% |
| !! | ATTAAGAAAAAAATATTACT+TGG | - | chr2_1:69065615-69065634 | None:intergenic | 10.0% |
| !!! | ATATCATCTTTTTTTTTTTT+GGG | - | chr2_1:69067443-69067462 | None:intergenic | 10.0% |
| !!! | TTTTTTCAATTAAGATAACA+GGG | - | chr2_1:69063768-69063787 | None:intergenic | 15.0% |
| !!! | AATCATTTTATTTTTTCTGA+AGG | - | chr2_1:69063967-69063986 | None:intergenic | 15.0% |
| !! | AATATATATGAATTGTGATT+TGG | + | chr2_1:69064250-69064269 | Msa0220650:intron | 15.0% |
| !! | AGTAAATACTTTATGAAAAA+TGG | - | chr2_1:69064302-69064321 | None:intergenic | 15.0% |
| !! | TAACATTAAATACATGAAAA+TGG | - | chr2_1:69065318-69065337 | None:intergenic | 15.0% |
| !! | ATTATATTATATAAGCAACA+CGG | + | chr2_1:69066463-69066482 | Msa0220650:intron | 15.0% |
| !!! | GATATCATCTTTTTTTTTTT+TGG | - | chr2_1:69067444-69067463 | None:intergenic | 15.0% |
| !!! | TTGCTATTGATTAAAATTAT+GGG | + | chr2_1:69067691-69067710 | Msa0220650:intron | 15.0% |
| !!! | TTGCATGTTTTTAATATTTT+AGG | - | chr2_1:69068284-69068303 | None:intergenic | 15.0% |
| !!! | AGTTTCTTAGTTTTGTTTTT+CGG | - | chr2_1:69062925-69062944 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTCTAGAAAACT+CGG | + | chr2_1:69063175-69063194 | Msa0220650:intron | 20.0% |
| !!! | ATTGAATTGGTTGATTTTTA+GGG | + | chr2_1:69063309-69063328 | Msa0220650:intron | 20.0% |
| !! | ATAGAAACCATTAGTAATTT+AGG | + | chr2_1:69063568-69063587 | Msa0220650:intron | 20.0% |
| !! | TAGAAACCATTAGTAATTTA+GGG | + | chr2_1:69063569-69063588 | Msa0220650:intron | 20.0% |
| !!! | TTTTTCAATTAAGATAACAG+GGG | - | chr2_1:69063767-69063786 | None:intergenic | 20.0% |
| !!! | GTTTTTTCAATTAAGATAAC+AGG | - | chr2_1:69063769-69063788 | None:intergenic | 20.0% |
| !! | GTAGTATTCGATAAAAATAA+GGG | - | chr2_1:69063847-69063866 | None:intergenic | 20.0% |
| !! | TGTAGTATTCGATAAAAATA+AGG | - | chr2_1:69063848-69063867 | None:intergenic | 20.0% |
| !!! | TATAACCAAAATTTTATTCC+AGG | - | chr2_1:69064202-69064221 | None:intergenic | 20.0% |
| !! | AATTAATGTAAATTGCTTCA+AGG | - | chr2_1:69065276-69065295 | None:intergenic | 20.0% |
| !! | CAATTTACATTAATTGAGTT+TGG | + | chr2_1:69065281-69065300 | Msa0220650:intron | 20.0% |
| !!! | AACCAAAATTCATTTGTTAT+TGG | + | chr2_1:69065532-69065551 | Msa0220650:intron | 20.0% |
| !!! | AGCATTTTATTTTGATTGAT+GGG | + | chr2_1:69065664-69065683 | Msa0220650:CDS | 20.0% |
| !!! | AATAAGATTTTATTCTACCT+GGG | - | chr2_1:69065842-69065861 | None:intergenic | 20.0% |
| !!! | AACAGCATATTTTTATGTAT+AGG | + | chr2_1:69065863-69065882 | Msa0220650:intron | 20.0% |
| !! | AATAATTAAGTATAGTGACT+AGG | + | chr2_1:69066200-69066219 | Msa0220650:intron | 20.0% |
| !! | ATAATTAAGTATAGTGACTA+GGG | + | chr2_1:69066201-69066220 | Msa0220650:intron | 20.0% |
| !! | TTTGTCAAAAATAAAAACCA+CGG | - | chr2_1:69067174-69067193 | None:intergenic | 20.0% |
| !! | TGATATCAATTTAATGACAT+AGG | - | chr2_1:69067213-69067232 | None:intergenic | 20.0% |
| !!! | ATCTTTTTTTTTTTTGGGAA+AGG | - | chr2_1:69067438-69067457 | None:intergenic | 20.0% |
| !!! | GTTGCTATTGATTAAAATTA+TGG | + | chr2_1:69067690-69067709 | Msa0220650:intron | 20.0% |
| !! | ATTAAAATTATGGGAGAAAA+TGG | + | chr2_1:69067700-69067719 | Msa0220650:intron | 20.0% |
| !!! | TAAGAAAAATGCATCAATTT+TGG | + | chr2_1:69067796-69067815 | Msa0220650:intron | 20.0% |
| !! | GTTAATGAAGAGAAAATATA+TGG | + | chr2_1:69067969-69067988 | Msa0220650:intron | 20.0% |
| !!! | ATAATATGCAATTTTGCTAA+AGG | + | chr2_1:69068180-69068199 | Msa0220650:intron | 20.0% |
| !!! | GTTCAAGTTTTTAAATTCAA+TGG | + | chr2_1:69068305-69068324 | Msa0220650:intron | 20.0% |
| !!! | TATGATATTTTGTTTTCAAC+AGG | + | chr2_1:69068377-69068396 | Msa0220650:intron | 20.0% |
| ! | GAAAAATGAGAATAGGAAAA+AGG | - | chr2_1:69062902-69062921 | None:intergenic | 25.0% |
| !!! | GTTTCTTAGTTTTGTTTTTC+GGG | - | chr2_1:69062924-69062943 | None:intergenic | 25.0% |
| ! | AATTGGAATAGGAATTGTAA+CGG | - | chr2_1:69062954-69062973 | None:intergenic | 25.0% |
| !!! | GATTGAATTGGTTGATTTTT+AGG | + | chr2_1:69063308-69063327 | Msa0220650:intron | 25.0% |
| !!! | TTGAATTGGTTGATTTTTAG+GGG | + | chr2_1:69063310-69063329 | Msa0220650:intron | 25.0% |
| !!! | GAAGGTTTGATGATTTTATT+TGG | + | chr2_1:69063467-69063486 | Msa0220650:intron | 25.0% |
| ! | AACAAACCCTAAATTACTAA+TGG | - | chr2_1:69063578-69063597 | None:intergenic | 25.0% |
| !! | TTAGTAATTTAGGGTTTGTT+TGG | + | chr2_1:69063578-69063597 | Msa0220650:intron | 25.0% |
| ! | AGATACTTACGATAAAATGA+CGG | - | chr2_1:69063677-69063696 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTTTTGTAGTGC+TGG | + | chr2_1:69064125-69064144 | Msa0220650:intron | 25.0% |
| !! | TCTTTCCTGGAATAAAATTT+TGG | + | chr2_1:69064194-69064213 | Msa0220650:CDS | 25.0% |
| ! | TTATTATATGTCCAAACCTT+GGG | - | chr2_1:69064232-69064251 | None:intergenic | 25.0% |
| ! | ATTATTATATGTCCAAACCT+TGG | - | chr2_1:69064233-69064252 | None:intergenic | 25.0% |
| !!! | TATGAATTGTGATTTGGTTA+TGG | + | chr2_1:69064256-69064275 | Msa0220650:intron | 25.0% |
| !! | ACAATTTTCAGTCACTATTA+TGG | + | chr2_1:69064483-69064502 | Msa0220650:intron | 25.0% |
| ! | ATTCTATAGTCAACCAAATA+TGG | + | chr2_1:69064653-69064672 | Msa0220650:intron | 25.0% |
| !! | TAATGAAGTATCATCAGAAA+AGG | + | chr2_1:69064840-69064859 | Msa0220650:CDS | 25.0% |
| !! | ACTAAATTAGACTTGTTCAA+CGG | - | chr2_1:69064941-69064960 | None:intergenic | 25.0% |
| ! | TGTATAAGTAAGAGAATACA+AGG | + | chr2_1:69065061-69065080 | Msa0220650:intron | 25.0% |
| ! | GACATATCCTTAAAAAAAAG+AGG | + | chr2_1:69065090-69065109 | Msa0220650:intron | 25.0% |
| !! | AGCCAATAACAAATGAATTT+TGG | - | chr2_1:69065537-69065556 | None:intergenic | 25.0% |
| !!! | CAGCATTTTATTTTGATTGA+TGG | + | chr2_1:69065663-69065682 | Msa0220650:CDS | 25.0% |
| !! | CAATAAGATTTTATTCTACC+TGG | - | chr2_1:69065843-69065862 | None:intergenic | 25.0% |
| ! | TGATAAAGCAAATGACAATA+CGG | + | chr2_1:69066013-69066032 | Msa0220650:intron | 25.0% |
| ! | ATAATTAGCGTAATATGAGT+TGG | + | chr2_1:69066054-69066073 | Msa0220650:intron | 25.0% |
| !!! | AGTAAGTTGATAAGTTTGTT+AGG | + | chr2_1:69066094-69066113 | Msa0220650:intron | 25.0% |
| ! | TAAAGATTGCAAATGAATGA+AGG | - | chr2_1:69066343-69066362 | None:intergenic | 25.0% |
| ! | TTTGCAATCTTTATTCTAGT+TGG | + | chr2_1:69066350-69066369 | Msa0220650:intron | 25.0% |
| ! | AAGAAAGAATTACCAAAACA+GGG | - | chr2_1:69066402-69066421 | None:intergenic | 25.0% |
| ! | TAAGAAAGAATTACCAAAAC+AGG | - | chr2_1:69066403-69066422 | None:intergenic | 25.0% |
| !! | AAAACACCAAACTACATTTT+AGG | + | chr2_1:69066984-69067003 | Msa0220650:intron | 25.0% |
| !!! | TTTGAACAAACTGCTATTTT+CGG | + | chr2_1:69067369-69067388 | Msa0220650:intron | 25.0% |
| ! | AAAAAGATGATATCATGTAG+AGG | + | chr2_1:69067450-69067469 | Msa0220650:intron | 25.0% |
| ! | TACAGTGATCATAATCTATA+GGG | - | chr2_1:69067480-69067499 | None:intergenic | 25.0% |
| ! | TCTTCAAAGTTCAAACATAA+TGG | - | chr2_1:69067562-69067581 | None:intergenic | 25.0% |
| ! | TAGAATCATGTATCAAAAGA+AGG | - | chr2_1:69067873-69067892 | None:intergenic | 25.0% |
| !!! | ATCATTGATTTGTTTATCGA+CGG | + | chr2_1:69068041-69068060 | Msa0220650:intron | 25.0% |
| !!! | TAATCATGTTTTTGCATCTT+AGG | + | chr2_1:69068117-69068136 | Msa0220650:intron | 25.0% |
| !!! | ATATTTTAGGACTATATCTC+AGG | - | chr2_1:69068271-69068290 | None:intergenic | 25.0% |
| ! | TGCTTTCTTATCTTAGTTAT+TGG | + | chr2_1:69068536-69068555 | Msa0220650:intron | 25.0% |
| !!! | CCTCTTGCAATTTTTTAAAT+CGG | + | chr2_1:69068867-69068886 | Msa0220650:intron | 25.0% |
| !!! | CTCTTGCAATTTTTTAAATC+GGG | + | chr2_1:69068868-69068887 | Msa0220650:intron | 25.0% |
| ! | TCTGTAAAAAATTAACATGG+AGG | - | chr2_1:69068948-69068967 | None:intergenic | 25.0% |
| !!! | TCCATGTTAATTTTTTACAG+AGG | + | chr2_1:69068947-69068966 | Msa0220650:intron | 25.0% |
| !! | TTTTCGGGAAAAATGAGAAT+AGG | - | chr2_1:69062909-69062928 | None:intergenic | 30.0% |
| CTTTAAATCTTCAGCGATTT+GGG | - | chr2_1:69063082-69063101 | None:intergenic | 30.0% | |
| TTCGATTCTCAGATGAAATT+TGG | + | chr2_1:69063117-69063136 | Msa0220650:intron | 30.0% | |
| AAAGTTACAAGTGAGTATGT+TGG | + | chr2_1:69063152-69063171 | Msa0220650:intron | 30.0% | |
| !! | GTTGATTTTTAGGGGAATTT+TGG | + | chr2_1:69063318-69063337 | Msa0220650:intron | 30.0% |
| ! | TTTTTGTAGAGCATAGACAT+CGG | + | chr2_1:69063522-69063541 | Msa0220650:intron | 30.0% |
| !! | ACTTTTTAGTCTTCATATGC+AGG | + | chr2_1:69064319-69064338 | Msa0220650:intron | 30.0% |
| GAAATAGTAGAAACTATGCT+AGG | - | chr2_1:69064553-69064572 | None:intergenic | 30.0% | |
| !! | ATTTTGGAAGCAGTAAAAGT+CGG | - | chr2_1:69064609-69064628 | None:intergenic | 30.0% |
| TATAGTCAACCAAATATGGA+TGG | + | chr2_1:69064657-69064676 | Msa0220650:intron | 30.0% | |
| ATAGTCAACCAAATATGGAT+GGG | + | chr2_1:69064658-69064677 | Msa0220650:intron | 30.0% | |
| CATTTATTCCCATCCATATT+TGG | - | chr2_1:69064669-69064688 | None:intergenic | 30.0% | |
| ! | GAATCAGTTGAAAATGCTTT+TGG | + | chr2_1:69064799-69064818 | Msa0220650:CDS | 30.0% |
| GATACTTCATTATTTGCAAC+TGG | - | chr2_1:69064832-69064851 | None:intergenic | 30.0% | |
| TTTAGTAGAGTTCAATCTTG+AGG | + | chr2_1:69064955-69064974 | Msa0220650:intron | 30.0% | |
| TAAGATATAGGAAAAGCAGA+AGG | + | chr2_1:69065008-69065027 | Msa0220650:intron | 30.0% | |
| GTAAGAGAATACAAGGATAT+AGG | + | chr2_1:69065068-69065087 | Msa0220650:intron | 30.0% | |
| !!! | CCTCTATCCTCTTTTTTTTA+AGG | - | chr2_1:69065100-69065119 | None:intergenic | 30.0% |
| CCTTAAAAAAAAGAGGATAG+AGG | + | chr2_1:69065097-69065116 | Msa0220650:intron | 30.0% | |
| AAGAAATGAAATTGCACTAC+TGG | + | chr2_1:69065394-69065413 | Msa0220650:intron | 30.0% | |
| !! | AGATTTTGCTATCTTCCATT+TGG | + | chr2_1:69065584-69065603 | Msa0220650:intron | 30.0% |
| !!! | TTATTTTGATTGATGGGACA+TGG | + | chr2_1:69065670-69065689 | Msa0220650:CDS | 30.0% |
| AAATTAACCTACTCCATGAT+TGG | + | chr2_1:69065806-69065825 | Msa0220650:intron | 30.0% | |
| ! | ATGTTTAAAACATCTAGCAC+AGG | + | chr2_1:69065935-69065954 | Msa0220650:intron | 30.0% |
| CACAGGATCTAAATACAATT+TGG | + | chr2_1:69065952-69065971 | Msa0220650:intron | 30.0% | |
| ! | TGTCATTTGCTTTATCACTA+AGG | - | chr2_1:69066010-69066029 | None:intergenic | 30.0% |
| !! | AAGTTGATAAGTTTGTTAGG+TGG | + | chr2_1:69066097-69066116 | Msa0220650:intron | 30.0% |
| GTTGTTAAGAGTTGTTAGTT+TGG | + | chr2_1:69066119-69066138 | Msa0220650:intron | 30.0% | |
| ATCGAAAGAGAAGATACAAA+AGG | - | chr2_1:69066299-69066318 | None:intergenic | 30.0% | |
| GGATTTCTTATTGATGAAGT+GGG | - | chr2_1:69066322-69066341 | None:intergenic | 30.0% | |
| AGGATTTCTTATTGATGAAG+TGG | - | chr2_1:69066323-69066342 | None:intergenic | 30.0% | |
| !! | ATTCTAGTTGGAACTTTTCT+CGG | + | chr2_1:69066362-69066381 | Msa0220650:intron | 30.0% |
| TCTTTCTTATAGCAGAAGAA+AGG | + | chr2_1:69066414-69066433 | Msa0220650:intron | 30.0% | |
| ! | AACACGGATTAAACTAAGAT+GGG | + | chr2_1:69066479-69066498 | Msa0220650:intron | 30.0% |
| ! | TATTCTGGTCTAGTTTGATT+TGG | - | chr2_1:69066514-69066533 | None:intergenic | 30.0% |
| ! | TTGTGATGCTATTTGTATTC+TGG | - | chr2_1:69066529-69066548 | None:intergenic | 30.0% |
| TTGTATGCTCTATATTGCTA+TGG | - | chr2_1:69066579-69066598 | None:intergenic | 30.0% | |
| GGTTAATTGTAAACCTCAAA+AGG | + | chr2_1:69066757-69066776 | Msa0220650:intron | 30.0% | |
| ATTGTAAACCTCAAAAGGTA+AGG | + | chr2_1:69066762-69066781 | Msa0220650:intron | 30.0% | |
| ! | GTAAGGTTGTTCATATTTTC+TGG | + | chr2_1:69066779-69066798 | Msa0220650:intron | 30.0% |
| GATATGCCTAAAATGTAGTT+TGG | - | chr2_1:69066993-69067012 | None:intergenic | 30.0% | |
| ! | AACTACATTTTAGGCATATC+TGG | + | chr2_1:69066993-69067012 | Msa0220650:intron | 30.0% |
| ! | ACTACATTTTAGGCATATCT+GGG | + | chr2_1:69066994-69067013 | Msa0220650:intron | 30.0% |
| ! | ATTTTTGACAAAGACAACCA+TGG | + | chr2_1:69067182-69067201 | Msa0220650:intron | 30.0% |
| TAATGACATAGGTTTAACCA+TGG | - | chr2_1:69067202-69067221 | None:intergenic | 30.0% | |
| TTCAAATTCTGCTATGTTAC+AGG | - | chr2_1:69067355-69067374 | None:intergenic | 30.0% | |
| GTACAGTGATCATAATCTAT+AGG | - | chr2_1:69067481-69067500 | None:intergenic | 30.0% | |
| !!! | AGTTTGTAAGGAAGCTTTTT+TGG | - | chr2_1:69067627-69067646 | None:intergenic | 30.0% |
| ACAACACTCTACAACATAAT+TGG | - | chr2_1:69067654-69067673 | None:intergenic | 30.0% | |
| CAGAACAACAATTATCTTGT+CGG | - | chr2_1:69067775-69067794 | None:intergenic | 30.0% | |
| TCATTAACTACTCACTTTAG+AGG | - | chr2_1:69067957-69067976 | None:intergenic | 30.0% | |
| ATTAAATAGAGCAAGAAGTG+AGG | - | chr2_1:69068101-69068120 | None:intergenic | 30.0% | |
| ! | TTTTGCATCTTAGGATGAAA+AGG | + | chr2_1:69068126-69068145 | Msa0220650:intron | 30.0% |
| TCATGTCTAAATGTTGTACA+AGG | - | chr2_1:69068161-69068180 | None:intergenic | 30.0% | |
| GATTTAGCGATATACAAGAA+AGG | - | chr2_1:69068434-69068453 | None:intergenic | 30.0% | |
| ACTAAGATAAGAAAGCAAGA+AGG | - | chr2_1:69068533-69068552 | None:intergenic | 30.0% | |
| TGAAGTCTAATTCCGATTTA+TGG | + | chr2_1:69068578-69068597 | Msa0220650:intron | 30.0% | |
| CCGATTTAAAAAATTGCAAG+AGG | - | chr2_1:69068870-69068889 | None:intergenic | 30.0% | |
| ! | GTTGTCACTATTTCTCATTA+GGG | - | chr2_1:69068904-69068923 | None:intergenic | 30.0% |
| ! | TGTTGTCACTATTTCTCATT+AGG | - | chr2_1:69068905-69068924 | None:intergenic | 30.0% |
| GCCTCTGTAAAAAATTAACA+TGG | - | chr2_1:69068951-69068970 | None:intergenic | 30.0% | |
| !! | TATTGGTGTCATCAAATCCT+TGG | + | chr2_1:69062869-69062888 | Msa0220650:CDS | 35.0% |
| ! | GCTTTAAATCTTCAGCGATT+TGG | - | chr2_1:69063083-69063102 | None:intergenic | 35.0% |
| ! | TTTCTAGAAAACTCGGTATC+CGG | + | chr2_1:69063182-69063201 | Msa0220650:intron | 35.0% |
| TGTGTGTGATGTGATTGAAT+TGG | + | chr2_1:69063296-69063315 | Msa0220650:intron | 35.0% | |
| ! | CTAAAGCCTTATAAGTTGCA+CGG | - | chr2_1:69063365-69063384 | None:intergenic | 35.0% |
| CAAAGGTTATCTTTGTCAGA+AGG | + | chr2_1:69063449-69063468 | Msa0220650:CDS | 35.0% | |
| !!! | TTTTTTCTGAAGGCTCTGTT+TGG | - | chr2_1:69063957-69063976 | None:intergenic | 35.0% |
| TTGGTTATATATGCATCCCA+AGG | + | chr2_1:69064213-69064232 | Msa0220650:CDS | 35.0% | |
| TATATATGCATCCCAAGGTT+TGG | + | chr2_1:69064218-69064237 | Msa0220650:intron | 35.0% | |
| ! | TTTTTACGACAGAACAACAC+TGG | + | chr2_1:69064344-69064363 | Msa0220650:CDS | 35.0% |
| ! | AAGCTTTTGTGGCAAGTTTT+TGG | + | chr2_1:69064368-69064387 | Msa0220650:CDS | 35.0% |
| ! | AGCTTTTGTGGCAAGTTTTT+GGG | + | chr2_1:69064369-69064388 | Msa0220650:CDS | 35.0% |
| !! | CACATGATTTGTTCATGTTC+AGG | - | chr2_1:69064428-69064447 | None:intergenic | 35.0% |
| CTGAACATGAACAAATCATG+TGG | + | chr2_1:69064426-69064445 | Msa0220650:CDS | 35.0% | |
| CATGTGGAATTCCTTTAAAC+TGG | + | chr2_1:69064442-69064461 | Msa0220650:CDS | 35.0% | |
| AAAGTAGTCAGATTCGATCT+TGG | + | chr2_1:69064518-69064537 | Msa0220650:intron | 35.0% | |
| CATTACTTCTTCCTGAATCA+AGG | - | chr2_1:69064744-69064763 | None:intergenic | 35.0% | |
| ATTCAGGAAGAAGTAATGTG+TGG | + | chr2_1:69064746-69064765 | Msa0220650:intron | 35.0% | |
| TCCAAAACAGCATTCTTGTT+GGG | - | chr2_1:69064781-69064800 | None:intergenic | 35.0% | |
| TTCCAAAACAGCATTCTTGT+TGG | - | chr2_1:69064782-69064801 | None:intergenic | 35.0% | |
| ! | AGTTGAAAATGCTTTTGGTC+AGG | + | chr2_1:69064804-69064823 | Msa0220650:CDS | 35.0% |
| GGGGTGTATTGTTAAGATAT+AGG | + | chr2_1:69064996-69065015 | Msa0220650:intron | 35.0% | |
| ! | TATTACTTGGTAGCACCAAA+TGG | - | chr2_1:69065602-69065621 | None:intergenic | 35.0% |
| AAAGCAAATGACAATACGGT+AGG | + | chr2_1:69066017-69066036 | Msa0220650:intron | 35.0% | |
| ! | TATTCAAATCTGCCCTGTTT+TGG | + | chr2_1:69066387-69066406 | Msa0220650:intron | 35.0% |
| ! | CAACACGGATTAAACTAAGA+TGG | + | chr2_1:69066478-69066497 | Msa0220650:intron | 35.0% |
| GCATCACAAGTCAAAACTAA+TGG | + | chr2_1:69066540-69066559 | Msa0220650:intron | 35.0% | |
| GCATACAAGTTCAAAATCGT+TGG | + | chr2_1:69066591-69066610 | Msa0220650:intron | 35.0% | |
| TCACAGTTACTAAAGAGTGA+AGG | + | chr2_1:69066635-69066654 | Msa0220650:intron | 35.0% | |
| AGTTACTAAAGAGTGAAGGA+TGG | + | chr2_1:69066639-69066658 | Msa0220650:intron | 35.0% | |
| GTTTGTTTCCTTCATCTTGT+TGG | + | chr2_1:69066727-69066746 | Msa0220650:intron | 35.0% | |
| ! | ATGAACAACCTTACCTTTTG+AGG | - | chr2_1:69066773-69066792 | None:intergenic | 35.0% |
| TTTGCGAGTTCGATTATGTT+GGG | + | chr2_1:69066802-69066821 | Msa0220650:intron | 35.0% | |
| CCATCTATAAAGGAGAAAAG+CGG | - | chr2_1:69066856-69066875 | None:intergenic | 35.0% | |
| ! | CGCTTTTCTCCTTTATAGAT+GGG | + | chr2_1:69066854-69066873 | Msa0220650:intron | 35.0% |
| ! | CTTTATAGATGGGTTCATGT+GGG | + | chr2_1:69066864-69066883 | Msa0220650:intron | 35.0% |
| ! | CTACATTTTAGGCATATCTG+GGG | + | chr2_1:69066995-69067014 | Msa0220650:intron | 35.0% |
| ! | TACATTTTAGGCATATCTGG+GGG | + | chr2_1:69066996-69067015 | Msa0220650:intron | 35.0% |
| TTTAACGAGTCTACGCATAA+TGG | - | chr2_1:69067029-69067048 | None:intergenic | 35.0% | |
| CCATGCAAGTATATGATTCT+TGG | - | chr2_1:69067122-69067141 | None:intergenic | 35.0% | |
| CCAAGAATCATATACTTGCA+TGG | + | chr2_1:69067119-69067138 | Msa0220650:intron | 35.0% | |
| TGCTCAAATAGCAGATATAG+TGG | + | chr2_1:69067236-69067255 | Msa0220650:intron | 35.0% | |
| GCTATTTGACAACACTTGTA+CGG | - | chr2_1:69067311-69067330 | None:intergenic | 35.0% | |
| ! | GTACAAGTGTTGTCAAATAG+CGG | + | chr2_1:69067310-69067329 | Msa0220650:intron | 35.0% |
| TCAACCAGTATTGTCAATCA+CGG | - | chr2_1:69067399-69067418 | None:intergenic | 35.0% | |
| ATAATTGGCAGCAGTTTGTA+AGG | - | chr2_1:69067639-69067658 | None:intergenic | 35.0% | |
| TTGATACATGATTCTAGCAG+AGG | + | chr2_1:69067877-69067896 | Msa0220650:intron | 35.0% | |
| TAGCAGAGGTTTAGATGTTA+TGG | + | chr2_1:69067891-69067910 | Msa0220650:intron | 35.0% | |
| ! | TTAACTACTCACTTTAGAGG+AGG | - | chr2_1:69067954-69067973 | None:intergenic | 35.0% |
| TATGCACAACAAATCATGGA+TGG | - | chr2_1:69068007-69068026 | None:intergenic | 35.0% | |
| TCAGGTAAAAATATCTCTGC+AGG | - | chr2_1:69068253-69068272 | None:intergenic | 35.0% | |
| TCTTGTATATCGCTAAATCC+TGG | + | chr2_1:69068435-69068454 | Msa0220650:CDS | 35.0% | |
| TTCCGATTTATGGTATTTCG+AGG | + | chr2_1:69068588-69068607 | Msa0220650:intron | 35.0% | |
| TCCGATTTATGGTATTTCGA+GGG | + | chr2_1:69068589-69068608 | Msa0220650:intron | 35.0% | |
| ATTTCAGCTGAACTAAACCT+CGG | - | chr2_1:69068691-69068710 | None:intergenic | 35.0% | |
| TTCAGCTGAAATGGATAAAC+AGG | + | chr2_1:69068699-69068718 | Msa0220650:CDS | 35.0% | |
| !! | TTGCCTTACTTTTCGTGTTA+TGG | - | chr2_1:69068797-69068816 | None:intergenic | 35.0% |
| CTAGGTTGTCAGAAAAAACT+TGG | - | chr2_1:69068843-69068862 | None:intergenic | 35.0% | |
| AAAATTGCAAGAGGCTTACT+AGG | - | chr2_1:69068861-69068880 | None:intergenic | 35.0% | |
| ! | GTTGTTGTTGTTGTTGAGAG+TGG | - | chr2_1:69062979-69062998 | None:intergenic | 40.0% |
| CTGTTGTCTCCTTACAAGAA+TGG | + | chr2_1:69063016-69063035 | Msa0220650:CDS | 40.0% | |
| CTTACAAGAATGGCAAGGTT+GGG | + | chr2_1:69063026-69063045 | Msa0220650:CDS | 40.0% | |
| TTACAAGAATGGCAAGGTTG+GGG | + | chr2_1:69063027-69063046 | Msa0220650:CDS | 40.0% | |
| ACTCACTTGTAACTTTCCAC+CGG | - | chr2_1:69063148-69063167 | None:intergenic | 40.0% | |
| GGACCAATGCCAATATTAGT+CGG | + | chr2_1:69063227-69063246 | Msa0220650:intron | 40.0% | |
| !! | GTACCGACTAATATTGGCAT+TGG | - | chr2_1:69063233-69063252 | None:intergenic | 40.0% |
| TGCCAATATTAGTCGGTACT+TGG | + | chr2_1:69063234-69063253 | Msa0220650:intron | 40.0% | |
| GCCAATATTAGTCGGTACTT+GGG | + | chr2_1:69063235-69063254 | Msa0220650:intron | 40.0% | |
| ! | CAAATAGCTTGTCGTGTACT+TGG | + | chr2_1:69063423-69063442 | Msa0220650:CDS | 40.0% |
| AAGTGTCAGTCCTACACAAA+TGG | + | chr2_1:69064044-69064063 | Msa0220650:intron | 40.0% | |
| TATTCCAGGAAAGAGCAAAG+AGG | - | chr2_1:69064188-69064207 | None:intergenic | 40.0% | |
| ! | ACAACACTGGAAAGCTTTTG+TGG | + | chr2_1:69064357-69064376 | Msa0220650:CDS | 40.0% |
| ! | GCTTTTGTGGCAAGTTTTTG+GGG | + | chr2_1:69064370-69064389 | Msa0220650:CDS | 40.0% |
| TGTGCAACTTTGTGCCTTTA+TGG | + | chr2_1:69064398-69064417 | Msa0220650:CDS | 40.0% | |
| CATGTTCAGGAATGCCATAA+AGG | - | chr2_1:69064415-69064434 | None:intergenic | 40.0% | |
| TGGAATTCCTTTAAACTGGC+AGG | + | chr2_1:69064446-69064465 | Msa0220650:CDS | 40.0% | |
| ACGGACACTAGTTGAAATGA+AGG | - | chr2_1:69064700-69064719 | None:intergenic | 40.0% | |
| TCAACTAGTGTCCGTTACTT+AGG | + | chr2_1:69064705-69064724 | Msa0220650:intron | 40.0% | |
| AAAACCCACGACCTAAGTAA+CGG | - | chr2_1:69064719-69064738 | None:intergenic | 40.0% | |
| ! | GTGGGTTTTTACCTTGATTC+AGG | + | chr2_1:69064730-69064749 | Msa0220650:intron | 40.0% |
| CAGCATTCTTGTTGGGATAA+AGG | - | chr2_1:69064774-69064793 | None:intergenic | 40.0% | |
| !! | TCCCAACAAGAATGCTGTTT+TGG | + | chr2_1:69064777-69064796 | Msa0220650:CDS | 40.0% |
| AGAGTTCAATCTTGAGGAGA+AGG | + | chr2_1:69064961-69064980 | Msa0220650:intron | 40.0% | |
| !! | TTGAGGAGAAGGTTGTTTTG+AGG | + | chr2_1:69064972-69064991 | Msa0220650:intron | 40.0% |
| AGGAAAAGCAGAAGGTTGTT+AGG | + | chr2_1:69065016-69065035 | Msa0220650:intron | 40.0% | |
| GAGATATATCTCTCCTCCAA+GGG | - | chr2_1:69065184-69065203 | None:intergenic | 40.0% | |
| AGAGATATATCTCTCCTCCA+AGG | - | chr2_1:69065185-69065204 | None:intergenic | 40.0% | |
| !! | GCTTCAAGGTACATTTTGAC+AGG | - | chr2_1:69065262-69065281 | None:intergenic | 40.0% |
| !! | ATACATGCATTGATTGCTGC+AGG | - | chr2_1:69065444-69065463 | None:intergenic | 40.0% |
| TGTATCTCTTGTGAAGTCAG+TGG | + | chr2_1:69065501-69065520 | Msa0220650:intron | 40.0% | |
| GCAATTCAGCAGCAATGTTT+AGG | + | chr2_1:69065694-69065713 | Msa0220650:CDS | 40.0% | |
| CTAATCACCAATCATGGAGT+AGG | - | chr2_1:69065816-69065835 | None:intergenic | 40.0% | |
| ! | CTACTCCATGATTGGTGATT+AGG | + | chr2_1:69065814-69065833 | Msa0220650:intron | 40.0% |
| AATGACAATACGGTAGGATG+TGG | + | chr2_1:69066023-69066042 | Msa0220650:intron | 40.0% | |
| AAGTATTCACATAGCCCTCA+AGG | + | chr2_1:69066153-69066172 | Msa0220650:intron | 40.0% | |
| AGTATTCACATAGCCCTCAA+GGG | + | chr2_1:69066154-69066173 | Msa0220650:intron | 40.0% | |
| TCTTTCCTTTCTACCCTTGA+GGG | - | chr2_1:69066170-69066189 | None:intergenic | 40.0% | |
| ATCTTTCCTTTCTACCCTTG+AGG | - | chr2_1:69066171-69066190 | None:intergenic | 40.0% | |
| TCAAGGGTAGAAAGGAAAGA+TGG | + | chr2_1:69066170-69066189 | Msa0220650:intron | 40.0% | |
| TGAAAGGAGAATGCTCCTTT+GGG | + | chr2_1:69066236-69066255 | Msa0220650:intron | 40.0% | |
| TACTAAAGAGTGAAGGATGG+TGG | + | chr2_1:69066642-69066661 | Msa0220650:intron | 40.0% | |
| ACTAAAGAGTGAAGGATGGT+GGG | + | chr2_1:69066643-69066662 | Msa0220650:intron | 40.0% | |
| CTTCATCTTGTTGGTCAGTT+GGG | + | chr2_1:69066736-69066755 | Msa0220650:intron | 40.0% | |
| GTTTGCGAGTTCGATTATGT+TGG | + | chr2_1:69066801-69066820 | Msa0220650:intron | 40.0% | |
| TTCGATTATGTTGGGAGCTA+TGG | + | chr2_1:69066810-69066829 | Msa0220650:intron | 40.0% | |
| TCGATTATGTTGGGAGCTAT+GGG | + | chr2_1:69066811-69066830 | Msa0220650:intron | 40.0% | |
| !! | CCGCTTTTCTCCTTTATAGA+TGG | + | chr2_1:69066853-69066872 | Msa0220650:intron | 40.0% |
| CCACATGAACCCATCTATAA+AGG | - | chr2_1:69066866-69066885 | None:intergenic | 40.0% | |
| ! | CCTTTATAGATGGGTTCATG+TGG | + | chr2_1:69066863-69066882 | Msa0220650:intron | 40.0% |
| !! | TCTGTTGAGTTGAACAACTG+AGG | + | chr2_1:69066899-69066918 | Msa0220650:intron | 40.0% |
| ATTGTACGAGTCTATGCAAG+TGG | + | chr2_1:69067048-69067067 | Msa0220650:intron | 40.0% | |
| ACTTGAGAATTTGACAACCG+TGG | + | chr2_1:69067154-69067173 | Msa0220650:intron | 40.0% | |
| TGATCCGTGATTGACAATAC+TGG | + | chr2_1:69067392-69067411 | Msa0220650:intron | 40.0% | |
| TGTATTCTCATTTGCTCCGT+TGG | + | chr2_1:69067535-69067554 | Msa0220650:intron | 40.0% | |
| GTATTCTCATTTGCTCCGTT+GGG | + | chr2_1:69067536-69067555 | Msa0220650:intron | 40.0% | |
| GTTCAAACATAATGGCCCAA+CGG | - | chr2_1:69067554-69067573 | None:intergenic | 40.0% | |
| CGCATATGCACAACAAATCA+TGG | - | chr2_1:69068011-69068030 | None:intergenic | 40.0% | |
| TTAGGATGAAAAGGCCTATG+TGG | + | chr2_1:69068135-69068154 | Msa0220650:intron | 40.0% | |
| AATGTTGTACAAGGCCACAT+AGG | - | chr2_1:69068152-69068171 | None:intergenic | 40.0% | |
| AGGATCAAGCGAAGTCAATT+TGG | + | chr2_1:69068397-69068416 | Msa0220650:intron | 40.0% | |
| GGATCAAGCGAAGTCAATTT+GGG | + | chr2_1:69068398-69068417 | Msa0220650:intron | 40.0% | |
| GATCAAGCGAAGTCAATTTG+GGG | + | chr2_1:69068399-69068418 | Msa0220650:CDS | 40.0% | |
| GCCCTCGAAATACCATAAAT+CGG | - | chr2_1:69068593-69068612 | None:intergenic | 40.0% | |
| ATTTATGGTATTTCGAGGGC+AGG | + | chr2_1:69068593-69068612 | Msa0220650:intron | 40.0% | |
| ! | GAGGTTTAGTTCAGCTGAAA+TGG | + | chr2_1:69068690-69068709 | Msa0220650:CDS | 40.0% |
| ACAAAGAGACGACTTCGAAT+GGG | + | chr2_1:69068766-69068785 | Msa0220650:CDS | 40.0% | |
| GGTCCATAACACGAAAAGTA+AGG | + | chr2_1:69068791-69068810 | Msa0220650:intron | 40.0% | |
| ! | TACAGAGGCTTCAAGTTTCA+AGG | + | chr2_1:69068962-69068981 | Msa0220650:intron | 40.0% |
| AGGAAAAAGGCTCTTGTCCA+AGG | - | chr2_1:69062889-69062908 | None:intergenic | 45.0% | |
| TGAGAGTGGCGAATTGGAAT+AGG | - | chr2_1:69062965-69062984 | None:intergenic | 45.0% | |
| TGTTGTTGAGAGTGGCGAAT+TGG | - | chr2_1:69062971-69062990 | None:intergenic | 45.0% | |
| GTCTCCTTACAAGAATGGCA+AGG | + | chr2_1:69063021-69063040 | Msa0220650:CDS | 45.0% | |
| CCAACCTTGCCATTCTTGTA+AGG | - | chr2_1:69063028-69063047 | None:intergenic | 45.0% | |
| CCTTACAAGAATGGCAAGGT+TGG | + | chr2_1:69063025-69063044 | Msa0220650:CDS | 45.0% | |
| AACATCACCAGTTCCAGCTA+TGG | + | chr2_1:69063053-69063072 | Msa0220650:CDS | 45.0% | |
| !! | TAATATTGGCATTGGTCCCC+CGG | - | chr2_1:69063225-69063244 | None:intergenic | 45.0% |
| !! | GCCCAAGTACCGACTAATAT+TGG | - | chr2_1:69063239-69063258 | None:intergenic | 45.0% |
| ATATTAGTCGGTACTTGGGC+CGG | + | chr2_1:69063239-69063258 | Msa0220650:intron | 45.0% | |
| CACCAACATCACCCAATATC+CGG | - | chr2_1:69063261-69063280 | None:intergenic | 45.0% | |
| !! | GAAGCACCGTGCAACTTATA+AGG | + | chr2_1:69063356-69063375 | Msa0220650:CDS | 45.0% |
| ! | TGTCGTGTACTTGGTAGCAA+AGG | + | chr2_1:69063432-69063451 | Msa0220650:CDS | 45.0% |
| ! | TGCATGTGTCAGTCTCGTTT+TGG | + | chr2_1:69063999-69064018 | Msa0220650:intron | 45.0% |
| GCAGCAACAACCATTTGTGT+AGG | - | chr2_1:69064057-69064076 | None:intergenic | 45.0% | |
| TTGTTGCTGCTGCTGAGTAA+TGG | + | chr2_1:69064067-69064086 | Msa0220650:intron | 45.0% | |
| !! | TTTGTAGTGCTGGCTTGCTA+TGG | + | chr2_1:69064135-69064154 | Msa0220650:intron | 45.0% |
| ACATCCTCTTTGCTCTTTCC+TGG | + | chr2_1:69064181-69064200 | Msa0220650:CDS | 45.0% | |
| TGAGAGACCTGCCAGTTTAA+AGG | - | chr2_1:69064456-69064475 | None:intergenic | 45.0% | |
| !!! | AGGAGAAGGTTGTTTTGAGG+AGG | + | chr2_1:69064975-69064994 | Msa0220650:intron | 45.0% |
| !!! | GGAGAAGGTTGTTTTGAGGA+GGG | + | chr2_1:69064976-69064995 | Msa0220650:intron | 45.0% |
| !!! | GAGAAGGTTGTTTTGAGGAG+GGG | + | chr2_1:69064977-69064996 | Msa0220650:intron | 45.0% |
| TACTGTGAAGGAGAAACCCT+TGG | + | chr2_1:69065165-69065184 | Msa0220650:intron | 45.0% | |
| TTCACCCAGAAGTTACCTGA+AGG | - | chr2_1:69065722-69065741 | None:intergenic | 45.0% | |
| TAGTGACTAGGGAATGCTCT+AGG | + | chr2_1:69066212-69066231 | Msa0220650:intron | 45.0% | |
| AGTGACTAGGGAATGCTCTA+GGG | + | chr2_1:69066213-69066232 | Msa0220650:intron | 45.0% | |
| GTGAAAGGAGAATGCTCCTT+TGG | + | chr2_1:69066235-69066254 | Msa0220650:intron | 45.0% | |
| GAAAGGAGAATGCTCCTTTG+GGG | + | chr2_1:69066237-69066256 | Msa0220650:intron | 45.0% | |
| AAAGGAGAATGCTCCTTTGG+GGG | + | chr2_1:69066238-69066257 | Msa0220650:intron | 45.0% | |
| AGATGATAACCCTGCACACA+AGG | - | chr2_1:69066267-69066286 | None:intergenic | 45.0% | |
| AGATTCAACTCGGTAGAGCT+AGG | + | chr2_1:69066689-69066708 | Msa0220650:intron | 45.0% | |
| CCAACTGACCAACAAGATGA+AGG | - | chr2_1:69066738-69066757 | None:intergenic | 45.0% | |
| CCTTCATCTTGTTGGTCAGT+TGG | + | chr2_1:69066735-69066754 | Msa0220650:intron | 45.0% | |
| CGATTATGTTGGGAGCTATG+GGG | + | chr2_1:69066812-69066831 | Msa0220650:intron | 45.0% | |
| !! | GGTTGATGTTTTGTGCACTG+TGG | + | chr2_1:69066920-69066939 | Msa0220650:intron | 45.0% |
| TAGGCATATCTGGGGGAAAA+TGG | + | chr2_1:69067003-69067022 | Msa0220650:intron | 45.0% | |
| ! | TAATCTTTTCCCAGCTTGCG+AGG | - | chr2_1:69067825-69067844 | None:intergenic | 45.0% |
| GAAGTCAATTTGGGGAGATG+AGG | + | chr2_1:69068407-69068426 | Msa0220650:CDS | 45.0% | |
| !! | TTATGCATGGCAGAAGTACC+AGG | - | chr2_1:69068456-69068475 | None:intergenic | 45.0% |
| CTTCTGCCATGCATAAACTC+AGG | + | chr2_1:69068460-69068479 | Msa0220650:CDS | 45.0% | |
| CTCTCACCTGAGTTTATGCA+TGG | - | chr2_1:69068469-69068488 | None:intergenic | 45.0% | |
| AACTAAACCTCGGAAGTAGG+TGG | - | chr2_1:69068681-69068700 | None:intergenic | 45.0% | |
| CTGAACTAAACCTCGGAAGT+AGG | - | chr2_1:69068684-69068703 | None:intergenic | 45.0% | |
| CACAAAGAGACGACTTCGAA+TGG | + | chr2_1:69068765-69068784 | Msa0220650:CDS | 45.0% | |
| CAGATGAAATTTGGTCGCGC+CGG | + | chr2_1:69063126-69063145 | Msa0220650:intron | 50.0% | |
| CTGCTGCTGAGTAATGGTTG+TGG | + | chr2_1:69064073-69064092 | Msa0220650:intron | 50.0% | |
| AGTGTCCGTTACTTAGGTCG+TGG | + | chr2_1:69064711-69064730 | Msa0220650:intron | 50.0% | |
| GTGTCCGTTACTTAGGTCGT+GGG | + | chr2_1:69064712-69064731 | Msa0220650:intron | 50.0% | |
| GAGTAGCGACTCTACTGTGA+AGG | + | chr2_1:69065153-69065172 | Msa0220650:intron | 50.0% | |
| TGTGAAGGAGAAACCCTTGG+AGG | + | chr2_1:69065168-69065187 | Msa0220650:intron | 50.0% | |
| AGCAATGTTTAGGCGCCTTC+AGG | + | chr2_1:69065704-69065723 | Msa0220650:CDS | 50.0% | |
| GGGCACCTAATCACCAATCA+TGG | - | chr2_1:69065822-69065841 | None:intergenic | 50.0% | |
| ! | TGATTGGTGATTAGGTGCCC+AGG | + | chr2_1:69065822-69065841 | Msa0220650:intron | 50.0% |
| CATAGCCCTCAAGGGTAGAA+AGG | + | chr2_1:69066162-69066181 | Msa0220650:intron | 50.0% | |
| !! | AGGGAATGCTCTAGGGTGAA+AGG | + | chr2_1:69066220-69066239 | Msa0220650:intron | 50.0% |
| TTGAATCTAGCCCCAACGAG+GGG | - | chr2_1:69066677-69066696 | None:intergenic | 50.0% | |
| GTTGAATCTAGCCCCAACGA+GGG | - | chr2_1:69066678-69066697 | None:intergenic | 50.0% | |
| AGTTGAATCTAGCCCCAACG+AGG | - | chr2_1:69066679-69066698 | None:intergenic | 50.0% | |
| CGTTGGGGCTAGATTCAACT+CGG | + | chr2_1:69066679-69066698 | Msa0220650:intron | 50.0% | |
| GTACATGTGCGATCCCAAGA+TGG | - | chr2_1:69068625-69068644 | None:intergenic | 50.0% | |
| AGAGACGACTTCGAATGGGA+AGG | + | chr2_1:69068770-69068789 | Msa0220650:CDS | 50.0% | |
| GACAACAGCGTCGTCGTTCA+TGG | - | chr2_1:69063004-69063023 | None:intergenic | 55.0% | |
| TGGGTGACCATAGCTGGAAC+TGG | - | chr2_1:69063063-69063082 | None:intergenic | 55.0% | |
| ! | GCGATTTGGGTGACCATAGC+TGG | - | chr2_1:69063069-69063088 | None:intergenic | 55.0% |
| ATGAAATTTGGTCGCGCCGG+TGG | + | chr2_1:69063129-69063148 | Msa0220650:intron | 55.0% | |
| !! | GGATTAGTCCGTCTTTGGGC+CGG | - | chr2_1:69063204-69063223 | None:intergenic | 55.0% |
| !! | GGCCCAAAGACGGACTAATC+CGG | + | chr2_1:69063203-69063222 | Msa0220650:intron | 55.0% |
| !! | GCCCAAAGACGGACTAATCC+GGG | + | chr2_1:69063204-69063223 | Msa0220650:intron | 55.0% |
| !! | CCCCGGATTAGTCCGTCTTT+GGG | - | chr2_1:69063208-69063227 | None:intergenic | 55.0% |
| !! | CCCAAAGACGGACTAATCCG+GGG | + | chr2_1:69063205-69063224 | Msa0220650:intron | 55.0% |
| !! | CCAAAGACGGACTAATCCGG+GGG | + | chr2_1:69063206-69063225 | Msa0220650:intron | 55.0% |
| TCGGTACTTGGGCCGGATAT+TGG | + | chr2_1:69063246-69063265 | Msa0220650:intron | 55.0% | |
| CGGTACTTGGGCCGGATATT+GGG | + | chr2_1:69063247-69063266 | Msa0220650:intron | 55.0% | |
| GGCCGGATATTGGGTGATGT+TGG | + | chr2_1:69063256-69063275 | Msa0220650:intron | 55.0% | |
| AGGCGCCTTCAGGTAACTTC+TGG | + | chr2_1:69065714-69065733 | Msa0220650:intron | 55.0% | |
| GGCGCCTTCAGGTAACTTCT+GGG | + | chr2_1:69065715-69065734 | Msa0220650:intron | 55.0% | |
| !! | AGAGTGAAGGATGGTGGGAC+TGG | + | chr2_1:69066648-69066667 | Msa0220650:intron | 55.0% |
| !! | GAGTGAAGGATGGTGGGACT+GGG | + | chr2_1:69066649-69066668 | Msa0220650:intron | 55.0% |
| !! | ATTTTGGCAGCCTCGCAAGC+TGG | + | chr2_1:69067812-69067831 | Msa0220650:intron | 55.0% |
| ! | TTTTGGCAGCCTCGCAAGCT+GGG | + | chr2_1:69067813-69067832 | Msa0220650:intron | 55.0% |
| GTGCGATCCCAAGATGGTTG+AGG | - | chr2_1:69068619-69068638 | None:intergenic | 55.0% | |
| CTCGGTATCCGGCCCAAAGA+CGG | + | chr2_1:69063193-69063212 | Msa0220650:intron | 60.0% | |
| !! | CCCCCGGATTAGTCCGTCTT+TGG | - | chr2_1:69063209-69063228 | None:intergenic | 60.0% |
| GCACACAAGGCTACCCCCAA+AGG | - | chr2_1:69066254-69066273 | None:intergenic | 60.0% | |
| !! | TTGGGGGTAGCCTTGTGTGC+AGG | + | chr2_1:69066254-69066273 | Msa0220650:intron | 60.0% |
| !! | TGGGGGTAGCCTTGTGTGCA+GGG | + | chr2_1:69066255-69066274 | Msa0220650:intron | 60.0% |
| AGGGCAGGCCTCAACCATCT+TGG | + | chr2_1:69068608-69068627 | Msa0220650:intron | 60.0% | |
| GGGCAGGCCTCAACCATCTT+GGG | + | chr2_1:69068609-69068628 | Msa0220650:intron | 60.0% | |
| GTAGGTGGAGCTCCAAGAGC+AGG | - | chr2_1:69068666-69068685 | None:intergenic | 60.0% | |
| TGGAGCTCCACCTACTTCCG+AGG | + | chr2_1:69068671-69068690 | Msa0220650:CDS | 60.0% | |
| TGGGACTGGGTTCCCCTCGT+TGG | + | chr2_1:69066662-69066681 | Msa0220650:intron | 65.0% | |
| GGGACTGGGTTCCCCTCGTT+GGG | + | chr2_1:69066663-69066682 | Msa0220650:intron | 65.0% | |
| GGACTGGGTTCCCCTCGTTG+GGG | + | chr2_1:69066664-69066683 | Msa0220650:intron | 65.0% | |
| TGTACAGCAGCCGCTGCTGC+TGG | + | chr2_1:69068640-69068659 | Msa0220650:CDS | 65.0% | |
| CAAGAGCAGGCCAGCAGCAG+CGG | - | chr2_1:69068653-69068672 | None:intergenic | 65.0% | |
| ! | CGCTGCTGCTGGCCTGCTCT+TGG | + | chr2_1:69068651-69068670 | Msa0220650:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 69062856 | 69068993 | 69062856 | ID=Msa0220650;Name=Msa0220650 |
| chr2_1 | mRNA | 69062856 | 69068993 | 69062856 | ID=Msa0220650-mRNA-1;Parent=Msa0220650;Name=Msa0220650-mRNA-1;_AED=0.21;_eAED=0.23;_QI=0|0.75|0.66|1|1|1|9|0|357 |
| chr2_1 | exon | 69062856 | 69063074 | 69062856 | ID=Msa0220650-mRNA-1:exon:19509;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69063330 | 69063470 | 69063330 | ID=Msa0220650-mRNA-1:exon:19510;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69064142 | 69064234 | 69064142 | ID=Msa0220650-mRNA-1:exon:19511;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69064341 | 69064467 | 69064341 | ID=Msa0220650-mRNA-1:exon:19512;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69064752 | 69064861 | 69064752 | ID=Msa0220650-mRNA-1:exon:19513;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69065645 | 69065725 | 69065645 | ID=Msa0220650-mRNA-1:exon:19514;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69068399 | 69068481 | 69068399 | ID=Msa0220650-mRNA-1:exon:19515;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69068615 | 69068807 | 69068615 | ID=Msa0220650-mRNA-1:exon:19516;Parent=Msa0220650-mRNA-1 |
| chr2_1 | exon | 69068967 | 69068993 | 69068967 | ID=Msa0220650-mRNA-1:exon:19517;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69062856 | 69063074 | 69062856 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69063330 | 69063470 | 69063330 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69064142 | 69064234 | 69064142 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69064341 | 69064467 | 69064341 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69064752 | 69064861 | 69064752 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69065645 | 69065725 | 69065645 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69068399 | 69068481 | 69068399 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69068615 | 69068807 | 69068615 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| chr2_1 | CDS | 69068967 | 69068993 | 69068967 | ID=Msa0220650-mRNA-1:cds;Parent=Msa0220650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
