Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221270 | KEH39288.1 | 71.864 | 590 | 55 | 8 | 2 | 498 | 1 | 572 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221270 | A0A072VCW3 | 71.864 | 590 | 55 | 8 | 2 | 498 | 1 | 572 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221270 | Msa0262930 | 0.904491 | 1.161487e-79 | -8.615850e-47 |
| Msa0221270 | Msa0337850 | 0.862006 | 6.875438e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0221270 | MtrunA17_Chr2g0325721 | 77.282 | 515 | 67 | 6 | 2 | 484 | 1 | 497 | 0.0 | 690 |
| Msa0221270 | MtrunA17_Chr2g0325721 | 48.077 | 104 | 54 | 0 | 286 | 389 | 397 | 500 | 1.66e-11 | 66.6 |
| Msa0221270 | MtrunA17_Chr2g0325861 | 62.738 | 526 | 135 | 10 | 1 | 485 | 1 | 506 | 1.10e-176 | 518 |
| Msa0221270 | MtrunA17_Chr2g0325861 | 40.284 | 211 | 110 | 2 | 286 | 482 | 447 | 655 | 2.36e-27 | 116 |
| Msa0221270 | MtrunA17_Chr2g0325861 | 41.778 | 225 | 105 | 2 | 287 | 485 | 406 | 630 | 2.51e-25 | 110 |
| Msa0221270 | MtrunA17_Chr2g0325361 | 61.078 | 501 | 144 | 5 | 32 | 485 | 11 | 507 | 6.29e-171 | 510 |
| Msa0221270 | MtrunA17_Chr2g0325361 | 44.891 | 274 | 119 | 5 | 234 | 485 | 384 | 647 | 1.79e-42 | 162 |
| Msa0221270 | MtrunA17_Chr2g0325361 | 49.500 | 200 | 101 | 0 | 286 | 485 | 504 | 703 | 1.28e-39 | 153 |
| Msa0221270 | MtrunA17_Chr2g0325361 | 40.444 | 225 | 99 | 1 | 286 | 475 | 588 | 812 | 1.70e-26 | 114 |
| Msa0221270 | MtrunA17_Chr2g0325281 | 61.489 | 470 | 146 | 6 | 34 | 485 | 13 | 465 | 1.57e-166 | 484 |
| Msa0221270 | MtrunA17_Chr2g0325281 | 44.898 | 147 | 81 | 0 | 277 | 423 | 439 | 585 | 8.19e-19 | 89.7 |
| Msa0221270 | MtrunA17_Chr2g0325281 | 34.389 | 221 | 110 | 9 | 164 | 369 | 373 | 573 | 7.57e-11 | 64.7 |
| Msa0221270 | MtrunA17_Chr2g0325321 | 60.426 | 470 | 151 | 6 | 34 | 485 | 13 | 465 | 3.08e-154 | 457 |
| Msa0221270 | MtrunA17_Chr2g0325321 | 44.792 | 192 | 106 | 0 | 287 | 478 | 393 | 584 | 2.39e-27 | 116 |
| Msa0221270 | MtrunA17_Chr2g0325321 | 42.767 | 159 | 84 | 1 | 279 | 430 | 441 | 599 | 4.40e-19 | 90.9 |
| Msa0221270 | MtrunA17_Chr2g0325621 | 54.762 | 420 | 141 | 6 | 32 | 430 | 14 | 405 | 7.89e-113 | 348 |
| Msa0221270 | MtrunA17_Chr2g0325221 | 43.860 | 513 | 220 | 10 | 25 | 487 | 42 | 536 | 4.54e-91 | 292 |
| Msa0221270 | MtrunA17_Chr6g0471251 | 43.977 | 523 | 212 | 7 | 1 | 487 | 1 | 478 | 1.63e-88 | 287 |
| Msa0221270 | MtrunA17_Chr2g0325711 | 42.685 | 499 | 215 | 11 | 34 | 485 | 26 | 500 | 8.79e-83 | 273 |
| Msa0221270 | MtrunA17_Chr2g0325811 | 41.472 | 557 | 240 | 11 | 2 | 485 | 1 | 544 | 3.31e-82 | 272 |
| Msa0221270 | MtrunA17_Chr2g0333341 | 53.801 | 342 | 143 | 5 | 66 | 406 | 122 | 449 | 4.54e-81 | 264 |
| Msa0221270 | MtrunA17_Chr2g0333341 | 32.746 | 284 | 157 | 8 | 217 | 485 | 180 | 444 | 4.06e-17 | 84.3 |
| Msa0221270 | MtrunA17_Chr2g0325651 | 41.649 | 485 | 157 | 12 | 6 | 478 | 18 | 388 | 1.85e-79 | 253 |
| Msa0221270 | MtrunA17_Chr2g0325691 | 41.535 | 508 | 213 | 10 | 6 | 476 | 6 | 466 | 2.04e-77 | 257 |
| Msa0221270 | MtrunA17_Chr2g0325691 | 33.255 | 424 | 252 | 9 | 78 | 473 | 297 | 717 | 8.27e-27 | 114 |
| Msa0221270 | MtrunA17_Chr2g0325691 | 35.248 | 383 | 212 | 10 | 127 | 487 | 321 | 689 | 6.38e-25 | 108 |
| Msa0221270 | MtrunA17_Chr2g0325661 | 36.031 | 655 | 172 | 16 | 2 | 468 | 1 | 596 | 3.87e-76 | 256 |
| Msa0221270 | MtrunA17_Chr2g0325761 | 40.747 | 562 | 173 | 13 | 15 | 479 | 34 | 532 | 5.30e-73 | 244 |
| Msa0221270 | MtrunA17_Chr2g0325761 | 39.109 | 202 | 102 | 2 | 288 | 468 | 390 | 591 | 2.63e-21 | 97.4 |
| Msa0221270 | MtrunA17_Chr2g0325761 | 42.857 | 168 | 74 | 3 | 286 | 431 | 430 | 597 | 1.90e-19 | 91.7 |
| Msa0221270 | MtrunA17_Chr2g0325761 | 36.207 | 232 | 103 | 5 | 274 | 484 | 197 | 404 | 3.66e-14 | 75.1 |
| Msa0221270 | MtrunA17_Chr2g0325351 | 43.187 | 433 | 174 | 10 | 32 | 425 | 16 | 415 | 6.46e-68 | 230 |
| Msa0221270 | MtrunA17_Chr7g0235901 | 43.077 | 325 | 170 | 4 | 75 | 398 | 1 | 311 | 1.24e-60 | 201 |
| Msa0221270 | MtrunA17_Chr5g0416271 | 40.153 | 391 | 158 | 7 | 48 | 432 | 11 | 331 | 1.18e-59 | 204 |
| Msa0221270 | MtrunA17_Chr5g0416271 | 37.500 | 216 | 111 | 3 | 238 | 439 | 119 | 324 | 5.65e-24 | 104 |
| Msa0221270 | MtrunA17_Chr5g0416271 | 40.594 | 202 | 91 | 7 | 289 | 485 | 81 | 258 | 6.37e-19 | 89.4 |
| Msa0221270 | MtrunA17_Chr5g0416271 | 33.460 | 263 | 151 | 5 | 230 | 483 | 80 | 327 | 3.30e-18 | 87.4 |
| Msa0221270 | MtrunA17_Chr5g0416271 | 38.824 | 170 | 91 | 2 | 329 | 485 | 145 | 314 | 1.65e-15 | 79.0 |
| Msa0221270 | MtrunA17_Chr2g0325781 | 37.978 | 366 | 145 | 8 | 2 | 349 | 1 | 302 | 6.23e-55 | 186 |
| Msa0221270 | MtrunA17_Chr2g0325781 | 36.364 | 231 | 123 | 6 | 268 | 485 | 79 | 298 | 1.11e-17 | 84.0 |
| Msa0221270 | MtrunA17_Chr5g0434741 | 40.426 | 376 | 135 | 10 | 2 | 365 | 1 | 299 | 3.46e-54 | 184 |
| Msa0221270 | MtrunA17_Chr5g0434741 | 35.106 | 188 | 105 | 4 | 291 | 468 | 124 | 304 | 1.14e-11 | 65.9 |
| Msa0221270 | MtrunA17_Chr2g0280141 | 37.019 | 416 | 230 | 8 | 68 | 478 | 54 | 442 | 8.41e-53 | 191 |
| Msa0221270 | MtrunA17_Chr2g0280141 | 29.843 | 382 | 228 | 9 | 110 | 477 | 176 | 531 | 6.99e-23 | 102 |
| Msa0221270 | MtrunA17_Chr2g0280141 | 37.500 | 176 | 108 | 2 | 275 | 449 | 378 | 552 | 1.18e-15 | 80.1 |
| Msa0221270 | MtrunA17_Chr2g0325701 | 34.658 | 453 | 215 | 8 | 6 | 424 | 6 | 411 | 1.35e-50 | 182 |
| Msa0221270 | MtrunA17_Chr2g0325701 | 35.096 | 208 | 110 | 6 | 283 | 479 | 175 | 368 | 5.64e-18 | 87.0 |
| Msa0221270 | MtrunA17_Chr2g0325701 | 34.171 | 199 | 108 | 6 | 291 | 485 | 153 | 332 | 5.36e-12 | 68.2 |
| Msa0221270 | MtrunA17_Chr2g0325741 | 39.080 | 348 | 133 | 9 | 1 | 307 | 1 | 310 | 1.39e-50 | 175 |
| Msa0221270 | MtrunA17_Chr2g0325261 | 39.323 | 384 | 137 | 12 | 1 | 369 | 1 | 303 | 1.30e-49 | 172 |
| Msa0221270 | MtrunA17_Chr2g0325341 | 39.323 | 384 | 137 | 12 | 1 | 369 | 1 | 303 | 1.30e-49 | 172 |
| Msa0221270 | MtrunA17_Chr2g0325231 | 35.993 | 589 | 210 | 17 | 1 | 485 | 1 | 526 | 2.68e-49 | 181 |
| Msa0221270 | MtrunA17_Chr2g0325231 | 44.186 | 215 | 102 | 2 | 287 | 487 | 468 | 678 | 1.09e-28 | 120 |
| Msa0221270 | MtrunA17_Chr2g0325231 | 38.854 | 157 | 86 | 1 | 286 | 432 | 551 | 707 | 4.32e-16 | 81.6 |
| Msa0221270 | MtrunA17_Chr2g0325611 | 44.558 | 294 | 115 | 5 | 193 | 473 | 57 | 315 | 2.37e-45 | 167 |
| Msa0221270 | MtrunA17_Chr2g0325611 | 28.162 | 419 | 208 | 8 | 12 | 430 | 3 | 328 | 4.99e-19 | 90.1 |
| Msa0221270 | MtrunA17_Chr2g0325201 | 47.083 | 240 | 112 | 3 | 147 | 384 | 2 | 228 | 1.86e-43 | 153 |
| Msa0221270 | MtrunA17_Chr2g0325731 | 94.366 | 71 | 4 | 0 | 428 | 498 | 1 | 71 | 3.46e-41 | 142 |
| Msa0221270 | MtrunA17_Chr2g0325641 | 41.126 | 231 | 101 | 2 | 288 | 483 | 1 | 231 | 1.97e-29 | 118 |
| Msa0221270 | MtrunA17_Chr2g0325641 | 45.500 | 200 | 95 | 2 | 286 | 478 | 55 | 247 | 3.85e-29 | 117 |
| Msa0221270 | MtrunA17_Chr2g0325641 | 39.035 | 228 | 97 | 4 | 286 | 471 | 83 | 310 | 2.56e-24 | 103 |
| Msa0221270 | MtrunA17_Chr5g0434751 | 45.205 | 219 | 97 | 3 | 288 | 485 | 1 | 217 | 3.90e-27 | 110 |
| Msa0221270 | MtrunA17_Chr5g0434751 | 40.889 | 225 | 112 | 2 | 286 | 489 | 41 | 265 | 2.74e-23 | 100 |
| Msa0221270 | MtrunA17_Chr2g0325241 | 41.026 | 195 | 112 | 1 | 295 | 486 | 120 | 314 | 2.03e-26 | 111 |
| Msa0221270 | MtrunA17_Chr2g0325241 | 33.831 | 201 | 101 | 5 | 281 | 449 | 133 | 333 | 1.69e-15 | 78.6 |
| Msa0221270 | MtrunA17_Chr3g0140581 | 36.905 | 168 | 92 | 2 | 101 | 268 | 1 | 154 | 7.96e-20 | 86.3 |
| Msa0221270 | MtrunA17_Chr2g0325801 | 40.000 | 160 | 62 | 5 | 1 | 160 | 1 | 126 | 1.73e-19 | 84.3 |
| Msa0221270 | MtrunA17_Chr4g0044221 | 39.791 | 191 | 100 | 5 | 122 | 309 | 12 | 190 | 2.75e-19 | 89.0 |
| Msa0221270 | MtrunA17_Chr2g0325791 | 43.165 | 139 | 69 | 1 | 293 | 431 | 41 | 169 | 2.66e-17 | 82.8 |
| Msa0221270 | MtrunA17_Chr2g0325791 | 39.597 | 149 | 81 | 2 | 331 | 473 | 24 | 169 | 3.22e-14 | 73.6 |
| Msa0221270 | MtrunA17_Chr2g0325751 | 39.496 | 119 | 65 | 1 | 354 | 472 | 3 | 114 | 3.87e-12 | 64.3 |
| Msa0221270 | MtrunA17_Chr2g0325751 | 43.860 | 114 | 57 | 1 | 374 | 487 | 9 | 115 | 4.30e-12 | 64.3 |
| Msa0221270 | MtrunA17_Chr2g0325751 | 37.778 | 135 | 77 | 1 | 298 | 432 | 3 | 130 | 2.06e-11 | 62.4 |
| Msa0221270 | MtrunA17_Chr2g0325751 | 39.516 | 124 | 68 | 1 | 316 | 439 | 7 | 123 | 2.15e-11 | 62.4 |
| Msa0221270 | MtrunA17_Chr2g0325211 | 35.625 | 160 | 85 | 2 | 297 | 442 | 2 | 157 | 1.50e-11 | 63.5 |
| Msa0221270 | MtrunA17_Chr2g0332961 | 40.361 | 166 | 85 | 4 | 276 | 430 | 78 | 240 | 1.93e-11 | 65.5 |
| Msa0221270 | MtrunA17_Chr2g0332961 | 37.563 | 197 | 100 | 5 | 289 | 479 | 47 | 226 | 5.23e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 85 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACCTTTGATTTCTTAAC+AGG | 0.227680 | 2_1:+69817416 | None:intergenic |
| GATGCAGTGAACAAATTAAT+TGG | 0.286057 | 2_1:-69816873 | Msa0221270:CDS |
| CAAGGAGCTGGAATTTAAAA+AGG | 0.308710 | 2_1:-69816436 | Msa0221270:CDS |
| TGCATCAAGCTCGTTCTCTT+TGG | 0.311415 | 2_1:+69816890 | None:intergenic |
| AACAGAAACATTATGAAAAC+TGG | 0.318986 | 2_1:-69816377 | Msa0221270:CDS |
| TAAATTCCAGCTCCTTGATT+TGG | 0.319233 | 2_1:+69816442 | None:intergenic |
| GTTCCTCTTCCTTCCTTTCA+CGG | 0.342021 | 2_1:+69816961 | None:intergenic |
| TGAATTTACTTTGGAATGTA+AGG | 0.352735 | 2_1:-69816913 | Msa0221270:CDS |
| TATTTGATAGAAAACTTGAT+TGG | 0.371620 | 2_1:-69817092 | Msa0221270:CDS |
| ATCATTGCTGTGATCATGAT+AGG | 0.380358 | 2_1:+69817391 | None:intergenic |
| TTCAATTGGTGGATCAGAAA+AGG | 0.384165 | 2_1:-69816171 | Msa0221270:CDS |
| GTCCTCAATATCTGTCTTGA+TGG | 0.384277 | 2_1:+69817244 | None:intergenic |
| TTGATTTGAGCTCCTCCACT+TGG | 0.428961 | 2_1:+69816232 | None:intergenic |
| TATCAAGGAGTTTGTGGTAA+AGG | 0.444893 | 2_1:-69817126 | Msa0221270:CDS |
| TCAATTGGTGGATCAGAAAA+GGG | 0.445676 | 2_1:-69816170 | Msa0221270:CDS |
| TCAAGAGAGAAGCAGCTTGA+AGG | 0.454073 | 2_1:-69816633 | Msa0221270:CDS |
| AAAGATGCAACTTGAAGGTC+GGG | 0.465394 | 2_1:-69816502 | Msa0221270:CDS |
| TAATTGTATCAAGGAGTTTG+TGG | 0.468606 | 2_1:-69817132 | Msa0221270:CDS |
| TGAAGGCAAAGCGAAGGATC+TGG | 0.472117 | 2_1:-69816280 | Msa0221270:CDS |
| GCTAGTTGAACGACGGGCAA+TGG | 0.479453 | 2_1:-69816538 | Msa0221270:CDS |
| TTGTGCTCAAATGAAAGAAT+TGG | 0.494143 | 2_1:-69816784 | Msa0221270:CDS |
| AGTCATTGATAATATTGATA+AGG | 0.496791 | 2_1:-69816985 | Msa0221270:CDS |
| TGAAAGTCAAATGAAGGAGT+TGG | 0.496818 | 2_1:-69816406 | Msa0221270:CDS |
| GAAAGTTGAAGGCCAAATCA+AGG | 0.499096 | 2_1:-69816454 | Msa0221270:CDS |
| AATTATTTGAGGATTGTAAG+AGG | 0.499546 | 2_1:-69817298 | Msa0221270:CDS |
| TCAACGAAGAAGCGACTTGA+AGG | 0.501483 | 2_1:-69816759 | Msa0221270:CDS |
| GCAACATGAAGGCCGGGTGA+TGG | 0.501679 | 2_1:-69816328 | Msa0221270:CDS |
| GAAGGAGTTTAAATCAAAAG+AGG | 0.503664 | 2_1:-69816478 | Msa0221270:CDS |
| GAAGCAATGTGAAGGATGGC+TGG | 0.507660 | 2_1:-69816709 | Msa0221270:CDS |
| GAAGGAGTTTGAATCAAAGA+TGG | 0.508553 | 2_1:-69816604 | Msa0221270:CDS |
| ATGAGAAGCAACATGAAGGC+CGG | 0.512889 | 2_1:-69816335 | Msa0221270:CDS |
| TGAAGGCCAAATCAAGGAGC+TGG | 0.513684 | 2_1:-69816448 | Msa0221270:CDS |
| ATCATCTTCCTTTGTTACCA+AGG | 0.513820 | 2_1:-69817541 | Msa0221270:CDS |
| GCGACTTGAAGGTCAGGTTA+AGG | 0.515056 | 2_1:-69816748 | Msa0221270:CDS |
| CATCACCAACATAAAATTGA+GGG | 0.515490 | 2_1:+69817609 | None:intergenic |
| TCATCACCAACATAAAATTG+AGG | 0.518201 | 2_1:+69817608 | None:intergenic |
| TAGTAGTGCTGTTAAGAAGA+GGG | 0.518338 | 2_1:-69817477 | Msa0221270:CDS |
| GTTGCTTCTCATTTAAGTCA+AGG | 0.519662 | 2_1:+69816346 | None:intergenic |
| TCAAAAGAGGAGAAAGTTGA+AGG | 0.524009 | 2_1:-69816465 | Msa0221270:CDS |
| GCTGGAGGACCTTGAGTCAA+AGG | 0.524311 | 2_1:-69816691 | Msa0221270:CDS |
| AATGCTTCTCCTTTGACTCA+AGG | 0.526996 | 2_1:+69816682 | None:intergenic |
| GTCCATCAAGACAGATATTG+AGG | 0.531510 | 2_1:-69817246 | Msa0221270:CDS |
| TCAAAAGAGAGGCAAAATCA+AGG | 0.534054 | 2_1:-69816213 | Msa0221270:CDS |
| GCTAAAGGTAACCTCCGAAA+AGG | 0.534105 | 2_1:-69816814 | Msa0221270:CDS |
| GCACTTTGAAAGTCAAATGA+AGG | 0.537688 | 2_1:-69816412 | Msa0221270:CDS |
| GAAGAAGCGACTTGAAGGTC+AGG | 0.538700 | 2_1:-69816754 | Msa0221270:CDS |
| TGAGAAGCAACATGAAGGCC+GGG | 0.540036 | 2_1:-69816334 | Msa0221270:CDS |
| AGAGAAGCTAGTTGAACGAC+GGG | 0.541148 | 2_1:-69816544 | Msa0221270:CDS |
| TCAAAGATGGAGGAACTTGA+AGG | 0.541445 | 2_1:-69816591 | Msa0221270:CDS |
| TTGCTTCATGCTCCATCACC+CGG | 0.542096 | 2_1:+69816316 | None:intergenic |
| CTCGAAACCCGGGAAAACCT+TGG | 0.542527 | 2_1:+69817524 | None:intergenic |
| GCAGCTTGAAGGATATATGA+AGG | 0.544518 | 2_1:-69816622 | Msa0221270:CDS |
| TGAAAGGAACAAGTTGCTAA+AGG | 0.545723 | 2_1:-69816829 | Msa0221270:CDS |
| AAGGAGTTTGTGGTAAAGGA+AGG | 0.548806 | 2_1:-69817122 | Msa0221270:CDS |
| GTAGTAGTGCTGTTAAGAAG+AGG | 0.550710 | 2_1:-69817478 | Msa0221270:CDS |
| AAAAGATGCAACTTGAAGGT+CGG | 0.554162 | 2_1:-69816503 | Msa0221270:CDS |
| GATAGAACTTAATCAAGTCA+AGG | 0.560272 | 2_1:-69817039 | Msa0221270:CDS |
| TGATAAGGACCGTGAAAGGA+AGG | 0.560715 | 2_1:-69816970 | Msa0221270:CDS |
| GCAACTTGAAGGTCGGGAGA+AGG | 0.574045 | 2_1:-69816496 | Msa0221270:CDS |
| TTTCTTAACAGGAATATGCA+AGG | 0.577105 | 2_1:+69817427 | None:intergenic |
| TGAAGTTCATCAGAAAGTGC+AGG | 0.580385 | 2_1:-69817165 | Msa0221270:CDS |
| GGAACTTGAAGGTCGTTCAA+AGG | 0.582951 | 2_1:-69816580 | Msa0221270:CDS |
| ATAGAACTTAATCAAGTCAA+GGG | 0.583347 | 2_1:-69817038 | Msa0221270:CDS |
| GGACCGTGAAAGGAAGGAAG+AGG | 0.585661 | 2_1:-69816964 | Msa0221270:CDS |
| AGAATTTGAAGGCAAAGCGA+AGG | 0.588626 | 2_1:-69816286 | Msa0221270:CDS |
| AAGAGAAGCAATGTGAAGGA+TGG | 0.592055 | 2_1:-69816713 | Msa0221270:CDS |
| TCATTGCTGTGATCATGATA+GGG | 0.596216 | 2_1:+69817392 | None:intergenic |
| GCAAAGGTGAGAGAATTTGA+AGG | 0.600132 | 2_1:-69816297 | Msa0221270:CDS |
| GAAACATTATGAAAACTGGA+TGG | 0.606274 | 2_1:-69816373 | Msa0221270:CDS |
| TCAAAAGAGAAGCAATGTGA+AGG | 0.610847 | 2_1:-69816717 | Msa0221270:CDS |
| GGAGTTTGAATCAAAGATGG+AGG | 0.617704 | 2_1:-69816601 | Msa0221270:CDS |
| TTAAATGAGAAGCAACATGA+AGG | 0.618712 | 2_1:-69816339 | Msa0221270:CDS |
| ATATTGATAAGGACCGTGAA+AGG | 0.619247 | 2_1:-69816974 | Msa0221270:CDS |
| CGGGAAAACCTTGGTAACAA+AGG | 0.621414 | 2_1:+69817533 | None:intergenic |
| AAGGAAGGAAGAGGAACTCA+AGG | 0.628919 | 2_1:-69816955 | Msa0221270:CDS |
| GGTGATGGAGCATGAAGCAA+AGG | 0.629813 | 2_1:-69816313 | Msa0221270:CDS |
| AGGAGTTTGTGGTAAAGGAA+GGG | 0.632276 | 2_1:-69817121 | Msa0221270:CDS |
| TATTCCTGTTAAGAAATCAA+AGG | 0.641017 | 2_1:-69817420 | Msa0221270:CDS |
| AGAGCGCAAGCTAGAGCTCG+AGG | 0.641179 | 2_1:-69817069 | Msa0221270:CDS |
| AAGAGAAGCTAGTTGAACGA+CGG | 0.649590 | 2_1:-69816545 | Msa0221270:CDS |
| AGGAGCTCAAATCAAAAGAG+AGG | 0.654158 | 2_1:-69816224 | Msa0221270:CDS |
| TGTAAGGTCTTTCTTCAGCG+AGG | 0.674133 | 2_1:+69817331 | None:intergenic |
| GCAATGTGAAGGATGGCTGG+AGG | 0.686234 | 2_1:-69816706 | Msa0221270:CDS |
| AGTTTGTGGTAAAGGAAGGG+CGG | 0.686572 | 2_1:-69817118 | Msa0221270:CDS |
| ACATTATGAAAACTGGATGG+AGG | 0.687349 | 2_1:-69816370 | Msa0221270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTTCTAACAATGTA+AGG | + | chr2_1:69816484-69816503 | None:intergenic | 15.0% |
| !! | ATTGTTAGAAAAATTATTTG+AGG | - | chr2_1:69816487-69816506 | Msa0221270:CDS | 15.0% |
| !!! | AAAAATTGATAATTGTATCA+AGG | - | chr2_1:69816655-69816674 | Msa0221270:CDS | 15.0% |
| !!! | AGTAAATTCATCAATTTTTT+GGG | + | chr2_1:69816873-69816892 | None:intergenic | 15.0% |
| !!! | AAGTAAATTCATCAATTTTT+TGG | + | chr2_1:69816874-69816893 | None:intergenic | 15.0% |
| !! | AAAAATTGATGAATTTACTT+TGG | - | chr2_1:69816874-69816893 | Msa0221270:CDS | 15.0% |
| !!! | ATAATTTTTCTAACAATGTA+AGG | + | chr2_1:69816484-69816503 | None:intergenic | 15.0% |
| !! | ATTGTTAGAAAAATTATTTG+AGG | - | chr2_1:69816487-69816506 | Msa0221270:CDS | 15.0% |
| !!! | AAAAATTGATAATTGTATCA+AGG | - | chr2_1:69816655-69816674 | Msa0221270:CDS | 15.0% |
| !!! | AGTAAATTCATCAATTTTTT+GGG | + | chr2_1:69816873-69816892 | None:intergenic | 15.0% |
| !!! | AAGTAAATTCATCAATTTTT+TGG | + | chr2_1:69816874-69816893 | None:intergenic | 15.0% |
| !! | AAAAATTGATGAATTTACTT+TGG | - | chr2_1:69816874-69816893 | Msa0221270:CDS | 15.0% |
| !! | TATTTGATAGAAAACTTGAT+TGG | - | chr2_1:69816704-69816723 | Msa0221270:CDS | 20.0% |
| !!! | AGTCATTGATAATATTGATA+AGG | - | chr2_1:69816811-69816830 | Msa0221270:CDS | 20.0% |
| !!! | CTAAAATACCATTTTTCAAT+TGG | - | chr2_1:69817611-69817630 | Msa0221270:CDS | 20.0% |
| !! | TATTTGATAGAAAACTTGAT+TGG | - | chr2_1:69816704-69816723 | Msa0221270:CDS | 20.0% |
| !!! | AGTCATTGATAATATTGATA+AGG | - | chr2_1:69816811-69816830 | Msa0221270:CDS | 20.0% |
| !!! | CTAAAATACCATTTTTCAAT+TGG | - | chr2_1:69817611-69817630 | Msa0221270:CDS | 20.0% |
| ! | TATTCCTGTTAAGAAATCAA+AGG | - | chr2_1:69816376-69816395 | Msa0221270:CDS | 25.0% |
| !! | AATACCTTTGATTTCTTAAC+AGG | + | chr2_1:69816383-69816402 | None:intergenic | 25.0% |
| ! | AATTATTTGAGGATTGTAAG+AGG | - | chr2_1:69816498-69816517 | Msa0221270:CDS | 25.0% |
| ! | ATAGAACTTAATCAAGTCAA+GGG | - | chr2_1:69816758-69816777 | Msa0221270:CDS | 25.0% |
| !!! | TGAATTTACTTTGGAATGTA+AGG | - | chr2_1:69816883-69816902 | Msa0221270:CDS | 25.0% |
| ! | AACAGAAACATTATGAAAAC+TGG | - | chr2_1:69817419-69817438 | Msa0221270:CDS | 25.0% |
| !!! | AAATACCATTTTTCAATTGG+TGG | - | chr2_1:69817614-69817633 | Msa0221270:CDS | 25.0% |
| ! | TATTCCTGTTAAGAAATCAA+AGG | - | chr2_1:69816376-69816395 | Msa0221270:CDS | 25.0% |
| !! | AATACCTTTGATTTCTTAAC+AGG | + | chr2_1:69816383-69816402 | None:intergenic | 25.0% |
| ! | AATTATTTGAGGATTGTAAG+AGG | - | chr2_1:69816498-69816517 | Msa0221270:CDS | 25.0% |
| ! | ATAGAACTTAATCAAGTCAA+GGG | - | chr2_1:69816758-69816777 | Msa0221270:CDS | 25.0% |
| !!! | TGAATTTACTTTGGAATGTA+AGG | - | chr2_1:69816883-69816902 | Msa0221270:CDS | 25.0% |
| ! | AACAGAAACATTATGAAAAC+TGG | - | chr2_1:69817419-69817438 | Msa0221270:CDS | 25.0% |
| !!! | AAATACCATTTTTCAATTGG+TGG | - | chr2_1:69817614-69817633 | Msa0221270:CDS | 25.0% |
| CATCACCAACATAAAATTGA+GGG | + | chr2_1:69816190-69816209 | None:intergenic | 30.0% | |
| TCATCACCAACATAAAATTG+AGG | + | chr2_1:69816191-69816210 | None:intergenic | 30.0% | |
| !!! | AATTTTATGTTGGTGATGAG+AGG | - | chr2_1:69816192-69816211 | Msa0221270:CDS | 30.0% |
| !!! | ATTTTATGTTGGTGATGAGA+GGG | - | chr2_1:69816193-69816212 | Msa0221270:CDS | 30.0% |
| TTTCTTAACAGGAATATGCA+AGG | + | chr2_1:69816372-69816391 | None:intergenic | 30.0% | |
| TAATTGTATCAAGGAGTTTG+TGG | - | chr2_1:69816664-69816683 | Msa0221270:CDS | 30.0% | |
| GATAGAACTTAATCAAGTCA+AGG | - | chr2_1:69816757-69816776 | Msa0221270:CDS | 30.0% | |
| GATGCAGTGAACAAATTAAT+TGG | - | chr2_1:69816923-69816942 | Msa0221270:CDS | 30.0% | |
| AAGCAGAAAAATTGTCTGAA+AGG | - | chr2_1:69816951-69816970 | Msa0221270:CDS | 30.0% | |
| TTGTGCTCAAATGAAAGAAT+TGG | - | chr2_1:69817012-69817031 | Msa0221270:CDS | 30.0% | |
| TCAAAAAAGATGCAACTTGA+AGG | - | chr2_1:69817289-69817308 | Msa0221270:CDS | 30.0% | |
| GAAGGAGTTTAAATCAAAAG+AGG | - | chr2_1:69817318-69817337 | Msa0221270:CDS | 30.0% | |
| GAAACATTATGAAAACTGGA+TGG | - | chr2_1:69817423-69817442 | Msa0221270:CDS | 30.0% | |
| TTAAATGAGAAGCAACATGA+AGG | - | chr2_1:69817457-69817476 | Msa0221270:CDS | 30.0% | |
| CATCACCAACATAAAATTGA+GGG | + | chr2_1:69816190-69816209 | None:intergenic | 30.0% | |
| TCATCACCAACATAAAATTG+AGG | + | chr2_1:69816191-69816210 | None:intergenic | 30.0% | |
| !!! | AATTTTATGTTGGTGATGAG+AGG | - | chr2_1:69816192-69816211 | Msa0221270:CDS | 30.0% |
| !!! | ATTTTATGTTGGTGATGAGA+GGG | - | chr2_1:69816193-69816212 | Msa0221270:CDS | 30.0% |
| TTTCTTAACAGGAATATGCA+AGG | + | chr2_1:69816372-69816391 | None:intergenic | 30.0% | |
| TAATTGTATCAAGGAGTTTG+TGG | - | chr2_1:69816664-69816683 | Msa0221270:CDS | 30.0% | |
| GATAGAACTTAATCAAGTCA+AGG | - | chr2_1:69816757-69816776 | Msa0221270:CDS | 30.0% | |
| GATGCAGTGAACAAATTAAT+TGG | - | chr2_1:69816923-69816942 | Msa0221270:CDS | 30.0% | |
| AAGCAGAAAAATTGTCTGAA+AGG | - | chr2_1:69816951-69816970 | Msa0221270:CDS | 30.0% | |
| TTGTGCTCAAATGAAAGAAT+TGG | - | chr2_1:69817012-69817031 | Msa0221270:CDS | 30.0% | |
| TCAAAAAAGATGCAACTTGA+AGG | - | chr2_1:69817289-69817308 | Msa0221270:CDS | 30.0% | |
| GAAGGAGTTTAAATCAAAAG+AGG | - | chr2_1:69817318-69817337 | Msa0221270:CDS | 30.0% | |
| GAAACATTATGAAAACTGGA+TGG | - | chr2_1:69817423-69817442 | Msa0221270:CDS | 30.0% | |
| TTAAATGAGAAGCAACATGA+AGG | - | chr2_1:69817457-69817476 | Msa0221270:CDS | 30.0% | |
| ! | CATGACCCTCAATTTTATGT+TGG | - | chr2_1:69816182-69816201 | Msa0221270:CDS | 35.0% |
| ATCATCTTCCTTTGTTACCA+AGG | - | chr2_1:69816255-69816274 | Msa0221270:CDS | 35.0% | |
| ! | ATTTTTCCAAACTCGAAACC+CGG | + | chr2_1:69816286-69816305 | None:intergenic | 35.0% |
| ! | TAGTAGTGCTGTTAAGAAGA+GGG | - | chr2_1:69816319-69816338 | Msa0221270:CDS | 35.0% |
| TCATTGCTGTGATCATGATA+GGG | + | chr2_1:69816407-69816426 | None:intergenic | 35.0% | |
| ATCATTGCTGTGATCATGAT+AGG | + | chr2_1:69816408-69816427 | None:intergenic | 35.0% | |
| TATCAAGGAGTTTGTGGTAA+AGG | - | chr2_1:69816670-69816689 | Msa0221270:CDS | 35.0% | |
| ATATTGATAAGGACCGTGAA+AGG | - | chr2_1:69816822-69816841 | Msa0221270:CDS | 35.0% | |
| TGAAAGGAACAAGTTGCTAA+AGG | - | chr2_1:69816967-69816986 | Msa0221270:CDS | 35.0% | |
| ! | AGCACAATCATTCTCCTTTT+CGG | + | chr2_1:69816999-69817018 | None:intergenic | 35.0% |
| TCAAAAGAGAAGCAATGTGA+AGG | - | chr2_1:69817079-69817098 | Msa0221270:CDS | 35.0% | |
| GAAGGAGTTTGAATCAAAGA+TGG | - | chr2_1:69817192-69817211 | Msa0221270:CDS | 35.0% | |
| AAAAGATGCAACTTGAAGGT+CGG | - | chr2_1:69817293-69817312 | Msa0221270:CDS | 35.0% | |
| TCAAAAGAGGAGAAAGTTGA+AGG | - | chr2_1:69817331-69817350 | Msa0221270:CDS | 35.0% | |
| TAAATTCCAGCTCCTTGATT+TGG | + | chr2_1:69817357-69817376 | None:intergenic | 35.0% | |
| CAAGGAGCTGGAATTTAAAA+AGG | - | chr2_1:69817360-69817379 | Msa0221270:CDS | 35.0% | |
| ! | GCACTTTGAAAGTCAAATGA+AGG | - | chr2_1:69817384-69817403 | Msa0221270:CDS | 35.0% |
| TGAAAGTCAAATGAAGGAGT+TGG | - | chr2_1:69817390-69817409 | Msa0221270:CDS | 35.0% | |
| ACATTATGAAAACTGGATGG+AGG | - | chr2_1:69817426-69817445 | Msa0221270:CDS | 35.0% | |
| GTTGCTTCTCATTTAAGTCA+AGG | + | chr2_1:69817453-69817472 | None:intergenic | 35.0% | |
| TCAAAAGAGAGGCAAAATCA+AGG | - | chr2_1:69817583-69817602 | Msa0221270:CDS | 35.0% | |
| CTGATCCACCAATTGAAAAA+TGG | + | chr2_1:69817622-69817641 | None:intergenic | 35.0% | |
| ! | TTCAATTGGTGGATCAGAAA+AGG | - | chr2_1:69817625-69817644 | Msa0221270:CDS | 35.0% |
| ! | TCAATTGGTGGATCAGAAAA+GGG | - | chr2_1:69817626-69817645 | Msa0221270:CDS | 35.0% |
| ! | CATGACCCTCAATTTTATGT+TGG | - | chr2_1:69816182-69816201 | Msa0221270:CDS | 35.0% |
| ATCATCTTCCTTTGTTACCA+AGG | - | chr2_1:69816255-69816274 | Msa0221270:CDS | 35.0% | |
| ! | ATTTTTCCAAACTCGAAACC+CGG | + | chr2_1:69816286-69816305 | None:intergenic | 35.0% |
| ! | TAGTAGTGCTGTTAAGAAGA+GGG | - | chr2_1:69816319-69816338 | Msa0221270:CDS | 35.0% |
| TCATTGCTGTGATCATGATA+GGG | + | chr2_1:69816407-69816426 | None:intergenic | 35.0% | |
| ATCATTGCTGTGATCATGAT+AGG | + | chr2_1:69816408-69816427 | None:intergenic | 35.0% | |
| TATCAAGGAGTTTGTGGTAA+AGG | - | chr2_1:69816670-69816689 | Msa0221270:CDS | 35.0% | |
| ATATTGATAAGGACCGTGAA+AGG | - | chr2_1:69816822-69816841 | Msa0221270:CDS | 35.0% | |
| TGAAAGGAACAAGTTGCTAA+AGG | - | chr2_1:69816967-69816986 | Msa0221270:CDS | 35.0% | |
| ! | AGCACAATCATTCTCCTTTT+CGG | + | chr2_1:69816999-69817018 | None:intergenic | 35.0% |
| TCAAAAGAGAAGCAATGTGA+AGG | - | chr2_1:69817079-69817098 | Msa0221270:CDS | 35.0% | |
| GAAGGAGTTTGAATCAAAGA+TGG | - | chr2_1:69817192-69817211 | Msa0221270:CDS | 35.0% | |
| AAAAGATGCAACTTGAAGGT+CGG | - | chr2_1:69817293-69817312 | Msa0221270:CDS | 35.0% | |
| TCAAAAGAGGAGAAAGTTGA+AGG | - | chr2_1:69817331-69817350 | Msa0221270:CDS | 35.0% | |
| TAAATTCCAGCTCCTTGATT+TGG | + | chr2_1:69817357-69817376 | None:intergenic | 35.0% | |
| CAAGGAGCTGGAATTTAAAA+AGG | - | chr2_1:69817360-69817379 | Msa0221270:CDS | 35.0% | |
| ! | GCACTTTGAAAGTCAAATGA+AGG | - | chr2_1:69817384-69817403 | Msa0221270:CDS | 35.0% |
| TGAAAGTCAAATGAAGGAGT+TGG | - | chr2_1:69817390-69817409 | Msa0221270:CDS | 35.0% | |
| ACATTATGAAAACTGGATGG+AGG | - | chr2_1:69817426-69817445 | Msa0221270:CDS | 35.0% | |
| GTTGCTTCTCATTTAAGTCA+AGG | + | chr2_1:69817453-69817472 | None:intergenic | 35.0% | |
| TCAAAAGAGAGGCAAAATCA+AGG | - | chr2_1:69817583-69817602 | Msa0221270:CDS | 35.0% | |
| CTGATCCACCAATTGAAAAA+TGG | + | chr2_1:69817622-69817641 | None:intergenic | 35.0% | |
| ! | TTCAATTGGTGGATCAGAAA+AGG | - | chr2_1:69817625-69817644 | Msa0221270:CDS | 35.0% |
| ! | TCAATTGGTGGATCAGAAAA+GGG | - | chr2_1:69817626-69817645 | Msa0221270:CDS | 35.0% |
| ! | CTTTGTTACCAAGGTTTTCC+CGG | - | chr2_1:69816264-69816283 | Msa0221270:CDS | 40.0% |
| ! | TTTGTTACCAAGGTTTTCCC+GGG | - | chr2_1:69816265-69816284 | Msa0221270:CDS | 40.0% |
| ! | TTTTTCCAAACTCGAAACCC+GGG | + | chr2_1:69816285-69816304 | None:intergenic | 40.0% |
| ! | GTAGTAGTGCTGTTAAGAAG+AGG | - | chr2_1:69816318-69816337 | Msa0221270:CDS | 40.0% |
| GTCCATCAAGACAGATATTG+AGG | - | chr2_1:69816550-69816569 | Msa0221270:CDS | 40.0% | |
| GTCCTCAATATCTGTCTTGA+TGG | + | chr2_1:69816555-69816574 | None:intergenic | 40.0% | |
| ! | TGAAGTTCATCAGAAAGTGC+AGG | - | chr2_1:69816631-69816650 | Msa0221270:CDS | 40.0% |
| AAGGAGTTTGTGGTAAAGGA+AGG | - | chr2_1:69816674-69816693 | Msa0221270:CDS | 40.0% | |
| AGGAGTTTGTGGTAAAGGAA+GGG | - | chr2_1:69816675-69816694 | Msa0221270:CDS | 40.0% | |
| ! | ACAATCATTCTCCTTTTCGG+AGG | + | chr2_1:69816996-69817015 | None:intergenic | 40.0% |
| AAGAGAAGCAATGTGAAGGA+TGG | - | chr2_1:69817083-69817102 | Msa0221270:CDS | 40.0% | |
| AATGCTTCTCCTTTGACTCA+AGG | + | chr2_1:69817117-69817136 | None:intergenic | 40.0% | |
| !!! | GTCAAAGGAGAAGCATTTTG+AGG | - | chr2_1:69817120-69817139 | Msa0221270:CDS | 40.0% |
| !!! | AGGAGAAGCATTTTGAGGTA+CGG | - | chr2_1:69817125-69817144 | Msa0221270:CDS | 40.0% |
| GCAGCTTGAAGGATATATGA+AGG | - | chr2_1:69817174-69817193 | Msa0221270:CDS | 40.0% | |
| GGAGTTTGAATCAAAGATGG+AGG | - | chr2_1:69817195-69817214 | Msa0221270:CDS | 40.0% | |
| TCAAAGATGGAGGAACTTGA+AGG | - | chr2_1:69817205-69817224 | Msa0221270:CDS | 40.0% | |
| AAGAGAAGCTAGTTGAACGA+CGG | - | chr2_1:69817251-69817270 | Msa0221270:CDS | 40.0% | |
| AAAGATGCAACTTGAAGGTC+GGG | - | chr2_1:69817294-69817313 | Msa0221270:CDS | 40.0% | |
| GAAAGTTGAAGGCCAAATCA+AGG | - | chr2_1:69817342-69817361 | Msa0221270:CDS | 40.0% | |
| GCAAAGGTGAGAGAATTTGA+AGG | - | chr2_1:69817499-69817518 | Msa0221270:CDS | 40.0% | |
| AGAATTTGAAGGCAAAGCGA+AGG | - | chr2_1:69817510-69817529 | Msa0221270:CDS | 40.0% | |
| !! | GAAGCATTTTGAAAGCCAAG+TGG | - | chr2_1:69817549-69817568 | Msa0221270:CDS | 40.0% |
| AGGAGCTCAAATCAAAAGAG+AGG | - | chr2_1:69817572-69817591 | Msa0221270:CDS | 40.0% | |
| ! | CTTTGTTACCAAGGTTTTCC+CGG | - | chr2_1:69816264-69816283 | Msa0221270:CDS | 40.0% |
| ! | TTTGTTACCAAGGTTTTCCC+GGG | - | chr2_1:69816265-69816284 | Msa0221270:CDS | 40.0% |
| ! | TTTTTCCAAACTCGAAACCC+GGG | + | chr2_1:69816285-69816304 | None:intergenic | 40.0% |
| ! | GTAGTAGTGCTGTTAAGAAG+AGG | - | chr2_1:69816318-69816337 | Msa0221270:CDS | 40.0% |
| GTCCATCAAGACAGATATTG+AGG | - | chr2_1:69816550-69816569 | Msa0221270:CDS | 40.0% | |
| GTCCTCAATATCTGTCTTGA+TGG | + | chr2_1:69816555-69816574 | None:intergenic | 40.0% | |
| ! | TGAAGTTCATCAGAAAGTGC+AGG | - | chr2_1:69816631-69816650 | Msa0221270:CDS | 40.0% |
| AAGGAGTTTGTGGTAAAGGA+AGG | - | chr2_1:69816674-69816693 | Msa0221270:CDS | 40.0% | |
| AGGAGTTTGTGGTAAAGGAA+GGG | - | chr2_1:69816675-69816694 | Msa0221270:CDS | 40.0% | |
| ! | ACAATCATTCTCCTTTTCGG+AGG | + | chr2_1:69816996-69817015 | None:intergenic | 40.0% |
| AAGAGAAGCAATGTGAAGGA+TGG | - | chr2_1:69817083-69817102 | Msa0221270:CDS | 40.0% | |
| AATGCTTCTCCTTTGACTCA+AGG | + | chr2_1:69817117-69817136 | None:intergenic | 40.0% | |
| !!! | GTCAAAGGAGAAGCATTTTG+AGG | - | chr2_1:69817120-69817139 | Msa0221270:CDS | 40.0% |
| !!! | AGGAGAAGCATTTTGAGGTA+CGG | - | chr2_1:69817125-69817144 | Msa0221270:CDS | 40.0% |
| GCAGCTTGAAGGATATATGA+AGG | - | chr2_1:69817174-69817193 | Msa0221270:CDS | 40.0% | |
| GGAGTTTGAATCAAAGATGG+AGG | - | chr2_1:69817195-69817214 | Msa0221270:CDS | 40.0% | |
| TCAAAGATGGAGGAACTTGA+AGG | - | chr2_1:69817205-69817224 | Msa0221270:CDS | 40.0% | |
| AAGAGAAGCTAGTTGAACGA+CGG | - | chr2_1:69817251-69817270 | Msa0221270:CDS | 40.0% | |
| AAAGATGCAACTTGAAGGTC+GGG | - | chr2_1:69817294-69817313 | Msa0221270:CDS | 40.0% | |
| GAAAGTTGAAGGCCAAATCA+AGG | - | chr2_1:69817342-69817361 | Msa0221270:CDS | 40.0% | |
| GCAAAGGTGAGAGAATTTGA+AGG | - | chr2_1:69817499-69817518 | Msa0221270:CDS | 40.0% | |
| AGAATTTGAAGGCAAAGCGA+AGG | - | chr2_1:69817510-69817529 | Msa0221270:CDS | 40.0% | |
| !! | GAAGCATTTTGAAAGCCAAG+TGG | - | chr2_1:69817549-69817568 | Msa0221270:CDS | 40.0% |
| AGGAGCTCAAATCAAAAGAG+AGG | - | chr2_1:69817572-69817591 | Msa0221270:CDS | 40.0% | |
| ! | CGGGAAAACCTTGGTAACAA+AGG | + | chr2_1:69816266-69816285 | None:intergenic | 45.0% |
| TGTAAGGTCTTTCTTCAGCG+AGG | + | chr2_1:69816468-69816487 | None:intergenic | 45.0% | |
| AGTTTGTGGTAAAGGAAGGG+CGG | - | chr2_1:69816678-69816697 | Msa0221270:CDS | 45.0% | |
| TGATAAGGACCGTGAAAGGA+AGG | - | chr2_1:69816826-69816845 | Msa0221270:CDS | 45.0% | |
| GTTCCTCTTCCTTCCTTTCA+CGG | + | chr2_1:69816838-69816857 | None:intergenic | 45.0% | |
| AAGGAAGGAAGAGGAACTCA+AGG | - | chr2_1:69816841-69816860 | Msa0221270:CDS | 45.0% | |
| TGCATCAAGCTCGTTCTCTT+TGG | + | chr2_1:69816909-69816928 | None:intergenic | 45.0% | |
| GCTAAAGGTAACCTCCGAAA+AGG | - | chr2_1:69816982-69817001 | Msa0221270:CDS | 45.0% | |
| TCAACGAAGAAGCGACTTGA+AGG | - | chr2_1:69817037-69817056 | Msa0221270:CDS | 45.0% | |
| !!! | GGAGAAGCATTTTGAGGTAC+GGG | - | chr2_1:69817126-69817145 | Msa0221270:CDS | 45.0% |
| !!! | GCATTTTGAGGTACGGGTAA+AGG | - | chr2_1:69817132-69817151 | Msa0221270:CDS | 45.0% |
| TCAAGAGAGAAGCAGCTTGA+AGG | - | chr2_1:69817163-69817182 | Msa0221270:CDS | 45.0% | |
| GGAACTTGAAGGTCGTTCAA+AGG | - | chr2_1:69817216-69817235 | Msa0221270:CDS | 45.0% | |
| AGAGAAGCTAGTTGAACGAC+GGG | - | chr2_1:69817252-69817271 | Msa0221270:CDS | 45.0% | |
| ATGAGAAGCAACATGAAGGC+CGG | - | chr2_1:69817461-69817480 | Msa0221270:CDS | 45.0% | |
| !! | GCATTTTGAAAGCCAAGTGG+AGG | - | chr2_1:69817552-69817571 | Msa0221270:CDS | 45.0% |
| ! | TTGATTTGAGCTCCTCCACT+TGG | + | chr2_1:69817567-69817586 | None:intergenic | 45.0% |
| ! | CGGGAAAACCTTGGTAACAA+AGG | + | chr2_1:69816266-69816285 | None:intergenic | 45.0% |
| TGTAAGGTCTTTCTTCAGCG+AGG | + | chr2_1:69816468-69816487 | None:intergenic | 45.0% | |
| AGTTTGTGGTAAAGGAAGGG+CGG | - | chr2_1:69816678-69816697 | Msa0221270:CDS | 45.0% | |
| TGATAAGGACCGTGAAAGGA+AGG | - | chr2_1:69816826-69816845 | Msa0221270:CDS | 45.0% | |
| GTTCCTCTTCCTTCCTTTCA+CGG | + | chr2_1:69816838-69816857 | None:intergenic | 45.0% | |
| AAGGAAGGAAGAGGAACTCA+AGG | - | chr2_1:69816841-69816860 | Msa0221270:CDS | 45.0% | |
| TGCATCAAGCTCGTTCTCTT+TGG | + | chr2_1:69816909-69816928 | None:intergenic | 45.0% | |
| GCTAAAGGTAACCTCCGAAA+AGG | - | chr2_1:69816982-69817001 | Msa0221270:CDS | 45.0% | |
| TCAACGAAGAAGCGACTTGA+AGG | - | chr2_1:69817037-69817056 | Msa0221270:CDS | 45.0% | |
| !!! | GGAGAAGCATTTTGAGGTAC+GGG | - | chr2_1:69817126-69817145 | Msa0221270:CDS | 45.0% |
| !!! | GCATTTTGAGGTACGGGTAA+AGG | - | chr2_1:69817132-69817151 | Msa0221270:CDS | 45.0% |
| TCAAGAGAGAAGCAGCTTGA+AGG | - | chr2_1:69817163-69817182 | Msa0221270:CDS | 45.0% | |
| GGAACTTGAAGGTCGTTCAA+AGG | - | chr2_1:69817216-69817235 | Msa0221270:CDS | 45.0% | |
| AGAGAAGCTAGTTGAACGAC+GGG | - | chr2_1:69817252-69817271 | Msa0221270:CDS | 45.0% | |
| ATGAGAAGCAACATGAAGGC+CGG | - | chr2_1:69817461-69817480 | Msa0221270:CDS | 45.0% | |
| !! | GCATTTTGAAAGCCAAGTGG+AGG | - | chr2_1:69817552-69817571 | Msa0221270:CDS | 45.0% |
| ! | TTGATTTGAGCTCCTCCACT+TGG | + | chr2_1:69817567-69817586 | None:intergenic | 45.0% |
| !!! | GTTTTCCCGGGTTTCGAGTT+TGG | - | chr2_1:69816277-69816296 | Msa0221270:CDS | 50.0% |
| GAAGAAGCGACTTGAAGGTC+AGG | - | chr2_1:69817042-69817061 | Msa0221270:CDS | 50.0% | |
| GCGACTTGAAGGTCAGGTTA+AGG | - | chr2_1:69817048-69817067 | Msa0221270:CDS | 50.0% | |
| GAAGCAATGTGAAGGATGGC+TGG | - | chr2_1:69817087-69817106 | Msa0221270:CDS | 50.0% | |
| TGAAGGCCAAATCAAGGAGC+TGG | - | chr2_1:69817348-69817367 | Msa0221270:CDS | 50.0% | |
| TGAGAAGCAACATGAAGGCC+GGG | - | chr2_1:69817462-69817481 | Msa0221270:CDS | 50.0% | |
| TTGCTTCATGCTCCATCACC+CGG | + | chr2_1:69817483-69817502 | None:intergenic | 50.0% | |
| !! | GGTGATGGAGCATGAAGCAA+AGG | - | chr2_1:69817483-69817502 | Msa0221270:CDS | 50.0% |
| TGAAGGCAAAGCGAAGGATC+TGG | - | chr2_1:69817516-69817535 | Msa0221270:CDS | 50.0% | |
| !!! | GTTTTCCCGGGTTTCGAGTT+TGG | - | chr2_1:69816277-69816296 | Msa0221270:CDS | 50.0% |
| GAAGAAGCGACTTGAAGGTC+AGG | - | chr2_1:69817042-69817061 | Msa0221270:CDS | 50.0% | |
| GCGACTTGAAGGTCAGGTTA+AGG | - | chr2_1:69817048-69817067 | Msa0221270:CDS | 50.0% | |
| GAAGCAATGTGAAGGATGGC+TGG | - | chr2_1:69817087-69817106 | Msa0221270:CDS | 50.0% | |
| TGAAGGCCAAATCAAGGAGC+TGG | - | chr2_1:69817348-69817367 | Msa0221270:CDS | 50.0% | |
| TGAGAAGCAACATGAAGGCC+GGG | - | chr2_1:69817462-69817481 | Msa0221270:CDS | 50.0% | |
| TTGCTTCATGCTCCATCACC+CGG | + | chr2_1:69817483-69817502 | None:intergenic | 50.0% | |
| !! | GGTGATGGAGCATGAAGCAA+AGG | - | chr2_1:69817483-69817502 | Msa0221270:CDS | 50.0% |
| TGAAGGCAAAGCGAAGGATC+TGG | - | chr2_1:69817516-69817535 | Msa0221270:CDS | 50.0% | |
| CTCGAAACCCGGGAAAACCT+TGG | + | chr2_1:69816275-69816294 | None:intergenic | 55.0% | |
| GGACCGTGAAAGGAAGGAAG+AGG | - | chr2_1:69816832-69816851 | Msa0221270:CDS | 55.0% | |
| GCAATGTGAAGGATGGCTGG+AGG | - | chr2_1:69817090-69817109 | Msa0221270:CDS | 55.0% | |
| GCTGGAGGACCTTGAGTCAA+AGG | - | chr2_1:69817105-69817124 | Msa0221270:CDS | 55.0% | |
| GCTAGTTGAACGACGGGCAA+TGG | - | chr2_1:69817258-69817277 | Msa0221270:CDS | 55.0% | |
| GCAACTTGAAGGTCGGGAGA+AGG | - | chr2_1:69817300-69817319 | Msa0221270:CDS | 55.0% | |
| CTCGAAACCCGGGAAAACCT+TGG | + | chr2_1:69816275-69816294 | None:intergenic | 55.0% | |
| GGACCGTGAAAGGAAGGAAG+AGG | - | chr2_1:69816832-69816851 | Msa0221270:CDS | 55.0% | |
| GCAATGTGAAGGATGGCTGG+AGG | - | chr2_1:69817090-69817109 | Msa0221270:CDS | 55.0% | |
| GCTGGAGGACCTTGAGTCAA+AGG | - | chr2_1:69817105-69817124 | Msa0221270:CDS | 55.0% | |
| GCTAGTTGAACGACGGGCAA+TGG | - | chr2_1:69817258-69817277 | Msa0221270:CDS | 55.0% | |
| GCAACTTGAAGGTCGGGAGA+AGG | - | chr2_1:69817300-69817319 | Msa0221270:CDS | 55.0% | |
| AGAGCGCAAGCTAGAGCTCG+AGG | - | chr2_1:69816727-69816746 | Msa0221270:CDS | 60.0% | |
| GCAACATGAAGGCCGGGTGA+TGG | - | chr2_1:69817468-69817487 | Msa0221270:CDS | 60.0% | |
| AGAGCGCAAGCTAGAGCTCG+AGG | - | chr2_1:69816727-69816746 | Msa0221270:CDS | 60.0% | |
| GCAACATGAAGGCCGGGTGA+TGG | - | chr2_1:69817468-69817487 | Msa0221270:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 69816161 | 69817657 | 69816161 | ID=Msa0221270;Name=Msa0221270 |
| chr2_1 | mRNA | 69816161 | 69817657 | 69816161 | ID=Msa0221270-mRNA-1;Parent=Msa0221270;Name=Msa0221270-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|498 |
| chr2_1 | exon | 69816161 | 69817657 | 69816161 | ID=Msa0221270-mRNA-1:exon:19841;Parent=Msa0221270-mRNA-1 |
| chr2_1 | CDS | 69816161 | 69817657 | 69816161 | ID=Msa0221270-mRNA-1:cds;Parent=Msa0221270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
