Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262930 | XP_024632150.1 | 54.054 | 148 | 58 | 3 | 394 | 541 | 60 | 197 | 5.26e-33 | 143 |
| Msa0262930 | XP_024632150.1 | 67.641 | 479 | 64 | 10 | 1 | 391 | 1 | 476 | 0.0 | 541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262930 | A0A396JHR8 | 54.054 | 148 | 58 | 3 | 394 | 541 | 60 | 197 | 2.51e-33 | 143 |
| Msa0262930 | A0A396JHR8 | 67.641 | 479 | 64 | 10 | 1 | 391 | 1 | 476 | 0.0 | 541 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005050 | Msa0262930 | 0.804677 | 1.925589e-49 | -8.615850e-47 |
| Msa0053110 | Msa0262930 | 0.811260 | 7.653356e-51 | -8.615850e-47 |
| Msa0072810 | Msa0262930 | 0.806611 | 7.562077e-50 | -8.615850e-47 |
| Msa0098440 | Msa0262930 | 0.816015 | 6.876062e-52 | -8.615850e-47 |
| Msa0103000 | Msa0262930 | 0.814162 | 1.772699e-51 | -8.615850e-47 |
| Msa0130570 | Msa0262930 | 0.800768 | 1.234437e-48 | -8.615850e-47 |
| Msa0141600 | Msa0262930 | 0.806365 | 8.521504e-50 | -8.615850e-47 |
| Msa0219190 | Msa0262930 | 0.806352 | 8.574445e-50 | -8.615850e-47 |
| Msa0221270 | Msa0262930 | 0.904491 | 1.161487e-79 | -8.615850e-47 |
| Msa0262930 | Msa0337850 | 0.913001 | 1.019526e-83 | -8.615850e-47 |
| Msa0262930 | Msa0338140 | 0.822864 | 1.885256e-53 | -8.615850e-47 |
| Msa0262930 | Msa0412440 | 0.810818 | 9.540533e-51 | -8.615850e-47 |
| Msa0262930 | Msa0419970 | 0.813494 | 2.488089e-51 | -8.615850e-47 |
| Msa0262930 | Msa0436500 | 0.815767 | 7.808110e-52 | -8.615850e-47 |
| Msa0262930 | Msa0456910 | 0.806204 | 9.215787e-50 | -8.615850e-47 |
| Msa0262930 | Msa0619980 | 0.819462 | 1.146779e-52 | -8.615850e-47 |
| Msa0262930 | Msa0747780 | 0.812324 | 4.489065e-51 | -8.615850e-47 |
| Msa0262930 | Msa0814320 | 0.812667 | 3.777679e-51 | -8.615850e-47 |
| Msa0262930 | Msa0833040 | 0.808546 | 2.936553e-50 | -8.615850e-47 |
| Msa0262930 | Msa0872310 | 0.803180 | 3.941652e-49 | -8.615850e-47 |
| Msa0262930 | Msa0905550 | 0.803516 | 3.357861e-49 | -8.615850e-47 |
| Msa0262930 | Msa0937550 | 0.803756 | 2.994743e-49 | -8.615850e-47 |
| Msa0262930 | Msa1033560 | 0.803491 | 3.398309e-49 | -8.615850e-47 |
| Msa0262930 | Msa1041530 | 0.803350 | 3.634802e-49 | -8.615850e-47 |
| Msa0262930 | Msa1078710 | 0.817543 | 3.122715e-52 | -8.615850e-47 |
| Msa0262930 | Msa1133710 | 0.807581 | 4.714210e-50 | -8.615850e-47 |
| Msa0262930 | Msa1420060 | 0.807646 | 4.565442e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262930 | MtrunA17_Chr2g0325721 | 67.641 | 479 | 64 | 10 | 1 | 391 | 1 | 476 | 0.0 | 541 |
| Msa0262930 | MtrunA17_Chr2g0325721 | 54.054 | 148 | 58 | 3 | 394 | 541 | 60 | 197 | 4.83e-37 | 143 |
| Msa0262930 | MtrunA17_Chr2g0325861 | 51.111 | 495 | 114 | 13 | 1 | 386 | 2 | 477 | 2.07e-118 | 370 |
| Msa0262930 | MtrunA17_Chr2g0325861 | 56.849 | 146 | 59 | 2 | 396 | 541 | 64 | 205 | 1.16e-34 | 139 |
| Msa0262930 | MtrunA17_Chr2g0325861 | 32.864 | 213 | 129 | 2 | 244 | 442 | 475 | 687 | 5.13e-16 | 81.6 |
| Msa0262930 | MtrunA17_Chr2g0325361 | 55.932 | 413 | 126 | 5 | 31 | 389 | 11 | 421 | 4.45e-117 | 371 |
| Msa0262930 | MtrunA17_Chr2g0325361 | 35.065 | 308 | 155 | 5 | 122 | 384 | 365 | 672 | 3.43e-26 | 113 |
| Msa0262930 | MtrunA17_Chr2g0325361 | 30.275 | 327 | 138 | 7 | 168 | 404 | 499 | 825 | 2.05e-19 | 92.4 |
| Msa0262930 | MtrunA17_Chr2g0325281 | 52.045 | 440 | 109 | 9 | 33 | 386 | 13 | 436 | 1.21e-114 | 353 |
| Msa0262930 | MtrunA17_Chr2g0325281 | 53.425 | 146 | 58 | 2 | 396 | 541 | 42 | 177 | 1.21e-36 | 144 |
| Msa0262930 | MtrunA17_Chr2g0325281 | 36.538 | 260 | 144 | 6 | 122 | 378 | 313 | 554 | 1.82e-19 | 92.0 |
| Msa0262930 | MtrunA17_Chr2g0325321 | 51.591 | 440 | 111 | 9 | 33 | 386 | 13 | 436 | 1.95e-106 | 336 |
| Msa0262930 | MtrunA17_Chr2g0325321 | 54.110 | 146 | 57 | 2 | 396 | 541 | 42 | 177 | 8.32e-37 | 145 |
| Msa0262930 | MtrunA17_Chr2g0325321 | 46.610 | 118 | 63 | 0 | 243 | 360 | 461 | 578 | 1.63e-18 | 89.4 |
| Msa0262930 | MtrunA17_Chr2g0325321 | 39.011 | 182 | 108 | 1 | 197 | 378 | 376 | 554 | 1.12e-17 | 86.7 |
| Msa0262930 | MtrunA17_Chr2g0325321 | 34.914 | 232 | 111 | 4 | 245 | 470 | 393 | 590 | 3.66e-17 | 85.1 |
| Msa0262930 | MtrunA17_Chr2g0325621 | 53.581 | 377 | 105 | 7 | 31 | 369 | 14 | 358 | 6.21e-87 | 282 |
| Msa0262930 | MtrunA17_Chr2g0325621 | 47.273 | 165 | 72 | 2 | 377 | 541 | 33 | 182 | 1.19e-29 | 123 |
| Msa0262930 | MtrunA17_Chr2g0325741 | 77.711 | 166 | 36 | 1 | 377 | 541 | 74 | 239 | 2.44e-80 | 254 |
| Msa0262930 | MtrunA17_Chr2g0325741 | 37.615 | 327 | 124 | 11 | 1 | 265 | 2 | 310 | 1.90e-37 | 140 |
| Msa0262930 | MtrunA17_Chr2g0333341 | 49.552 | 335 | 142 | 7 | 64 | 378 | 122 | 449 | 9.13e-66 | 225 |
| Msa0262930 | MtrunA17_Chr2g0333341 | 40.123 | 162 | 72 | 3 | 382 | 541 | 107 | 245 | 1.81e-20 | 95.1 |
| Msa0262930 | MtrunA17_Chr6g0471251 | 39.316 | 468 | 164 | 12 | 1 | 378 | 2 | 439 | 2.96e-65 | 226 |
| Msa0262930 | MtrunA17_Chr6g0471251 | 50.000 | 134 | 57 | 3 | 377 | 510 | 80 | 203 | 1.61e-25 | 111 |
| Msa0262930 | MtrunA17_Chr2g0325661 | 37.593 | 540 | 154 | 18 | 1 | 401 | 1 | 496 | 1.25e-63 | 223 |
| Msa0262930 | MtrunA17_Chr2g0325661 | 45.562 | 169 | 73 | 4 | 377 | 531 | 78 | 241 | 3.47e-28 | 119 |
| Msa0262930 | MtrunA17_Chr2g0325661 | 30.916 | 262 | 145 | 7 | 120 | 360 | 368 | 614 | 2.90e-11 | 66.6 |
| Msa0262930 | MtrunA17_Chr2g0325651 | 40.941 | 425 | 142 | 11 | 5 | 384 | 18 | 378 | 1.25e-62 | 210 |
| Msa0262930 | MtrunA17_Chr2g0325651 | 43.114 | 167 | 77 | 5 | 377 | 532 | 51 | 210 | 1.02e-23 | 103 |
| Msa0262930 | MtrunA17_Chr2g0325351 | 41.985 | 393 | 153 | 11 | 31 | 355 | 16 | 401 | 3.97e-54 | 194 |
| Msa0262930 | MtrunA17_Chr2g0325351 | 53.763 | 186 | 59 | 5 | 377 | 541 | 40 | 219 | 8.64e-44 | 165 |
| Msa0262930 | MtrunA17_Chr2g0325691 | 38.427 | 445 | 197 | 10 | 5 | 381 | 6 | 441 | 6.71e-54 | 194 |
| Msa0262930 | MtrunA17_Chr2g0325691 | 60.843 | 166 | 53 | 4 | 377 | 541 | 58 | 212 | 3.25e-42 | 161 |
| Msa0262930 | MtrunA17_Chr2g0325691 | 32.796 | 372 | 210 | 10 | 120 | 459 | 321 | 684 | 2.50e-19 | 92.0 |
| Msa0262930 | MtrunA17_Chr2g0325691 | 37.891 | 256 | 140 | 6 | 133 | 378 | 446 | 692 | 3.89e-18 | 88.2 |
| Msa0262930 | MtrunA17_Chr2g0325701 | 36.916 | 428 | 176 | 9 | 5 | 378 | 6 | 393 | 3.69e-53 | 190 |
| Msa0262930 | MtrunA17_Chr2g0325701 | 62.722 | 169 | 55 | 3 | 377 | 540 | 57 | 222 | 3.77e-45 | 168 |
| Msa0262930 | MtrunA17_Chr5g0416271 | 40.974 | 349 | 141 | 9 | 47 | 369 | 15 | 324 | 6.67e-53 | 187 |
| Msa0262930 | MtrunA17_Chr5g0416271 | 50.000 | 166 | 52 | 5 | 377 | 542 | 20 | 154 | 1.95e-27 | 115 |
| Msa0262930 | MtrunA17_Chr5g0434741 | 39.726 | 365 | 122 | 10 | 1 | 328 | 1 | 304 | 8.15e-52 | 179 |
| Msa0262930 | MtrunA17_Chr5g0434741 | 44.242 | 165 | 73 | 6 | 379 | 532 | 40 | 196 | 2.40e-26 | 109 |
| Msa0262930 | MtrunA17_Chr7g0235901 | 41.108 | 343 | 136 | 5 | 71 | 384 | 6 | 311 | 2.31e-51 | 178 |
| Msa0262930 | MtrunA17_Chr7g0235901 | 63.043 | 138 | 34 | 2 | 404 | 541 | 1 | 121 | 4.24e-45 | 161 |
| Msa0262930 | MtrunA17_Chr2g0325231 | 35.560 | 464 | 194 | 11 | 5 | 384 | 7 | 449 | 4.38e-50 | 185 |
| Msa0262930 | MtrunA17_Chr2g0325231 | 60.417 | 192 | 63 | 4 | 357 | 541 | 25 | 210 | 8.88e-48 | 178 |
| Msa0262930 | MtrunA17_Chr2g0325231 | 38.911 | 257 | 134 | 8 | 128 | 378 | 418 | 657 | 2.29e-22 | 101 |
| Msa0262930 | MtrunA17_Chr2g0325231 | 34.737 | 285 | 158 | 5 | 120 | 378 | 319 | 601 | 5.14e-21 | 97.4 |
| Msa0262930 | MtrunA17_Chr2g0325781 | 60.000 | 165 | 49 | 4 | 377 | 541 | 56 | 203 | 8.27e-50 | 174 |
| Msa0262930 | MtrunA17_Chr2g0325781 | 35.652 | 345 | 141 | 8 | 1 | 307 | 1 | 302 | 2.83e-43 | 156 |
| Msa0262930 | MtrunA17_Chr2g0325221 | 34.775 | 555 | 243 | 16 | 24 | 488 | 42 | 567 | 4.87e-49 | 180 |
| Msa0262930 | MtrunA17_Chr2g0325221 | 51.053 | 190 | 76 | 5 | 353 | 541 | 62 | 235 | 2.20e-41 | 158 |
| Msa0262930 | MtrunA17_Chr2g0325221 | 28.662 | 314 | 191 | 7 | 87 | 372 | 281 | 589 | 4.78e-13 | 72.0 |
| Msa0262930 | MtrunA17_Chr2g0325711 | 37.592 | 407 | 172 | 8 | 33 | 378 | 26 | 411 | 2.32e-48 | 179 |
| Msa0262930 | MtrunA17_Chr2g0325711 | 53.333 | 165 | 68 | 5 | 377 | 541 | 51 | 206 | 2.45e-34 | 138 |
| Msa0262930 | MtrunA17_Chr2g0325711 | 38.095 | 168 | 94 | 1 | 220 | 377 | 337 | 504 | 1.16e-17 | 86.7 |
| Msa0262930 | MtrunA17_Chr2g0325261 | 39.892 | 371 | 116 | 12 | 1 | 330 | 2 | 306 | 1.16e-47 | 168 |
| Msa0262930 | MtrunA17_Chr2g0325261 | 46.795 | 156 | 68 | 5 | 386 | 541 | 44 | 184 | 4.51e-27 | 111 |
| Msa0262930 | MtrunA17_Chr2g0325341 | 39.892 | 371 | 116 | 12 | 1 | 330 | 2 | 306 | 1.16e-47 | 168 |
| Msa0262930 | MtrunA17_Chr2g0325341 | 46.795 | 156 | 68 | 5 | 386 | 541 | 44 | 184 | 4.51e-27 | 111 |
| Msa0262930 | MtrunA17_Chr2g0325811 | 38.512 | 457 | 172 | 13 | 1 | 378 | 1 | 427 | 1.37e-44 | 169 |
| Msa0262930 | MtrunA17_Chr2g0325811 | 56.970 | 165 | 66 | 3 | 378 | 541 | 71 | 231 | 2.11e-39 | 153 |
| Msa0262930 | MtrunA17_Chr2g0325811 | 29.236 | 301 | 192 | 7 | 87 | 372 | 277 | 571 | 4.29e-11 | 65.9 |
| Msa0262930 | MtrunA17_Chr2g0325761 | 36.927 | 436 | 207 | 10 | 14 | 381 | 34 | 469 | 7.69e-44 | 165 |
| Msa0262930 | MtrunA17_Chr2g0325761 | 46.012 | 163 | 74 | 5 | 380 | 542 | 78 | 226 | 9.40e-21 | 96.3 |
| Msa0262930 | MtrunA17_Chr2g0325761 | 34.902 | 255 | 133 | 9 | 120 | 361 | 363 | 597 | 3.72e-16 | 81.6 |
| Msa0262930 | MtrunA17_Chr2g0325611 | 45.417 | 240 | 105 | 4 | 171 | 384 | 57 | 296 | 1.76e-35 | 140 |
| Msa0262930 | MtrunA17_Chr2g0325611 | 28.869 | 336 | 171 | 9 | 11 | 317 | 3 | 299 | 5.34e-14 | 74.7 |
| Msa0262930 | MtrunA17_Chr2g0280141 | 36.254 | 331 | 162 | 8 | 75 | 372 | 64 | 378 | 5.25e-32 | 131 |
| Msa0262930 | MtrunA17_Chr2g0325801 | 72.368 | 76 | 21 | 0 | 426 | 501 | 50 | 125 | 7.23e-26 | 102 |
| Msa0262930 | MtrunA17_Chr2g0325801 | 39.216 | 153 | 65 | 4 | 1 | 153 | 2 | 126 | 3.20e-19 | 84.0 |
| Msa0262930 | MtrunA17_Chr2g0325201 | 34.328 | 268 | 98 | 4 | 140 | 370 | 2 | 228 | 1.04e-21 | 94.0 |
| Msa0262930 | MtrunA17_Chr2g0325641 | 40.462 | 173 | 100 | 1 | 246 | 415 | 1 | 173 | 6.38e-20 | 91.3 |
| Msa0262930 | MtrunA17_Chr2g0325641 | 43.590 | 156 | 67 | 2 | 244 | 378 | 55 | 210 | 4.62e-18 | 85.5 |
| Msa0262930 | MtrunA17_Chr2g0325641 | 41.104 | 163 | 68 | 3 | 244 | 378 | 125 | 287 | 1.92e-16 | 80.9 |
| Msa0262930 | MtrunA17_Chr2g0325641 | 38.554 | 166 | 89 | 3 | 224 | 384 | 150 | 307 | 3.21e-15 | 77.0 |
| Msa0262930 | MtrunA17_Chr2g0325641 | 37.566 | 189 | 91 | 3 | 224 | 386 | 17 | 204 | 3.64e-14 | 73.9 |
| Msa0262930 | MtrunA17_Chr2g0325791 | 39.375 | 160 | 79 | 2 | 188 | 347 | 28 | 169 | 9.50e-17 | 81.6 |
| Msa0262930 | MtrunA17_Chr2g0325791 | 39.726 | 146 | 79 | 3 | 224 | 361 | 25 | 169 | 1.25e-12 | 69.3 |
| Msa0262930 | MtrunA17_Chr2g0325791 | 31.492 | 181 | 103 | 4 | 251 | 430 | 41 | 201 | 8.13e-11 | 63.5 |
| Msa0262930 | MtrunA17_Chr2g0325241 | 39.860 | 143 | 72 | 1 | 253 | 381 | 120 | 262 | 2.21e-16 | 81.6 |
| Msa0262930 | MtrunA17_Chr2g0325241 | 28.463 | 397 | 193 | 13 | 1 | 385 | 8 | 325 | 2.44e-16 | 81.3 |
| Msa0262930 | MtrunA17_Chr5g0434751 | 42.308 | 156 | 86 | 1 | 227 | 378 | 20 | 175 | 8.46e-16 | 78.2 |
| Msa0262930 | MtrunA17_Chr5g0434751 | 34.653 | 202 | 107 | 3 | 209 | 385 | 44 | 245 | 4.65e-12 | 67.0 |
| Msa0262930 | MtrunA17_Chr2g0332961 | 40.426 | 141 | 55 | 6 | 384 | 516 | 2 | 121 | 5.17e-14 | 73.6 |
| Msa0262930 | MtrunA17_Chr2g0332961 | 35.404 | 161 | 83 | 3 | 238 | 383 | 82 | 236 | 1.30e-12 | 69.3 |
| Msa0262930 | MtrunA17_Chr3g0140581 | 44.086 | 93 | 52 | 0 | 446 | 538 | 4 | 96 | 1.81e-12 | 65.5 |
| Msa0262930 | MtrunA17_Chr3g0140581 | 34.395 | 157 | 74 | 3 | 94 | 235 | 1 | 143 | 2.44e-12 | 65.1 |
| Msa0262930 | MtrunA17_Chr2g0325751 | 39.683 | 126 | 69 | 1 | 244 | 362 | 5 | 130 | 2.33e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 85 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTCAATCTCTCTCTTTA+TGG | 0.138778 | 2_2:+61939091 | None:intergenic |
| TATTTCGTCAAGAATTAAAA+TGG | 0.260976 | 2_2:-61939228 | Msa0262930:CDS |
| GTAATACACTACCAGTTAAA+AGG | 0.292699 | 2_2:-61939358 | Msa0262930:CDS |
| CAAGGAGCTGGAATTTAAAA+AGG | 0.308710 | 2_2:-61944349 | Msa0262930:CDS |
| TGCATCAAGCTCGTTCTCTT+TGG | 0.311415 | 2_2:+61944806 | None:intergenic |
| AACAGAAACATTATGAAAAC+TGG | 0.318986 | 2_2:-61944290 | Msa0262930:CDS |
| TAAATTCCAGCTCCTTGATT+TGG | 0.319233 | 2_2:+61944355 | None:intergenic |
| GCTGAAGAAAGAACTCAAAT+TGG | 0.337884 | 2_2:-61939174 | Msa0262930:CDS |
| AGATCTTGAAAATAAGAAAA+AGG | 0.341083 | 2_2:-61939060 | Msa0262930:CDS |
| GTTCCTCTTCCTTCCTTTCA+CGG | 0.342021 | 2_2:+61944877 | None:intergenic |
| TGAATTTACTTTGGAATGTA+AGG | 0.352735 | 2_2:-61944829 | Msa0262930:CDS |
| TATTTGATAGAAAACTTGAT+TGG | 0.371620 | 2_2:-61945008 | Msa0262930:CDS |
| ATCATTGCTGTGATCATGAT+AGG | 0.380358 | 2_2:+61945307 | None:intergenic |
| GTCCTCAATATCTGTCTTGA+TGG | 0.384277 | 2_2:+61945160 | None:intergenic |
| TATTTGATGGAGGACTTGAT+TGG | 0.409942 | 2_2:-61938939 | Msa0262930:CDS |
| GGAAGCACACCTCTATTTGA+TGG | 0.443917 | 2_2:-61938952 | Msa0262930:CDS |
| GTTAAGAAGAGGGATACTTC+TGG | 0.448712 | 2_2:-61939380 | Msa0262930:intron |
| CGTTATCATCATACGGTGCT+GGG | 0.451444 | 2_2:+61939279 | None:intergenic |
| TCAAGAGAGAAGCAGCTTGA+AGG | 0.454073 | 2_2:-61944546 | Msa0262930:CDS |
| AATCATTTGTGGGTTGCAAA+AGG | 0.460427 | 2_2:-61939145 | Msa0262930:CDS |
| TCGTTATCATCATACGGTGC+TGG | 0.482747 | 2_2:+61939278 | None:intergenic |
| CGAAGCTCGCAAGAAAATCC+AGG | 0.486257 | 2_2:-61939012 | Msa0262930:CDS |
| TTGTGCTCAAATGAAAGAAT+TGG | 0.494143 | 2_2:-61944697 | Msa0262930:CDS |
| GTCCATAAAGAGAGAGATTG+AGG | 0.494859 | 2_2:-61939093 | Msa0262930:CDS |
| AGTCATTGATAATATTGATA+AGG | 0.496791 | 2_2:-61944901 | Msa0262930:CDS |
| TGAAAGTCAAATGAAGGAGT+TGG | 0.496818 | 2_2:-61944319 | Msa0262930:CDS |
| GAAAGTTGAAGGCCAAATCA+AGG | 0.499096 | 2_2:-61944367 | Msa0262930:CDS |
| AATTATTTGAGGATTGTAAG+AGG | 0.499546 | 2_2:-61945214 | Msa0262930:CDS |
| TCAACGAAGAAGCGACTTGA+AGG | 0.501483 | 2_2:-61944672 | Msa0262930:CDS |
| GCAACATGAAGGCCGGGTGA+TGG | 0.501679 | 2_2:-61944241 | Msa0262930:CDS |
| GAAGGAGTTTAAATCAAAAG+AGG | 0.503664 | 2_2:-61944391 | Msa0262930:CDS |
| GAAGCAATGTGAAGGATGGC+TGG | 0.507660 | 2_2:-61944622 | Msa0262930:CDS |
| GAAGGAGTTTGAATCAAAGA+TGG | 0.508553 | 2_2:-61944517 | Msa0262930:CDS |
| CATCACCAACATAAAATTGA+GGG | 0.510264 | 2_2:+61945522 | None:intergenic |
| ATGAGAAGCAACATGAAGGC+CGG | 0.512889 | 2_2:-61944248 | Msa0262930:CDS |
| TGAAGGCCAAATCAAGGAGC+TGG | 0.513684 | 2_2:-61944361 | Msa0262930:CDS |
| ATCATCTTCCTTTGTTACCA+AGG | 0.513820 | 2_2:-61945454 | Msa0262930:CDS |
| GCGACTTGAAGGTCAGGTTA+AGG | 0.515056 | 2_2:-61944661 | Msa0262930:CDS |
| TCAAGTCCTCCATCAAATAG+AGG | 0.517023 | 2_2:+61938943 | None:intergenic |
| TCATCACCAACATAAAATTG+AGG | 0.518201 | 2_2:+61945521 | None:intergenic |
| TAGTAGTGCTGTTAAGAAGA+GGG | 0.518338 | 2_2:-61945393 | Msa0262930:CDS |
| GTTGCTTCTCATTTAAGTCA+AGG | 0.519662 | 2_2:+61944259 | None:intergenic |
| TCAAAAGAGGAGAAAGTTGA+AGG | 0.524009 | 2_2:-61944378 | Msa0262930:CDS |
| GCTGGAGGACCTTGAGTCAA+AGG | 0.524311 | 2_2:-61944604 | Msa0262930:CDS |
| AATGCTTCTCCTTTGACTCA+AGG | 0.526996 | 2_2:+61944595 | None:intergenic |
| GTCCATCAAGACAGATATTG+AGG | 0.531510 | 2_2:-61945162 | Msa0262930:CDS |
| GCTAAAGGTAACCTCCGAAA+AGG | 0.534105 | 2_2:-61944727 | Msa0262930:intron |
| GCACTTTGAAAGTCAAATGA+AGG | 0.537688 | 2_2:-61944325 | Msa0262930:CDS |
| GAAGAAGCGACTTGAAGGTC+AGG | 0.538700 | 2_2:-61944667 | Msa0262930:CDS |
| TGAGAAGCAACATGAAGGCC+GGG | 0.540036 | 2_2:-61944247 | Msa0262930:CDS |
| TCAAAGATGGAGGAACTTGA+AGG | 0.541445 | 2_2:-61944504 | Msa0262930:intron |
| TTGCTTCATGCTCCATCACC+CGG | 0.542096 | 2_2:+61944229 | None:intergenic |
| CTCGAAACCCGGGAAAACCT+TGG | 0.542527 | 2_2:+61945437 | None:intergenic |
| GCAGCTTGAAGGATATATGA+AGG | 0.544518 | 2_2:-61944535 | Msa0262930:CDS |
| GATAACAACAATGCCTTGCA+CGG | 0.547240 | 2_2:-61939326 | Msa0262930:CDS |
| GTAGTAGTGCTGTTAAGAAG+AGG | 0.550710 | 2_2:-61945394 | Msa0262930:CDS |
| TTTCTTAATCGAACCGTGCA+AGG | 0.550857 | 2_2:+61939313 | None:intergenic |
| GATAGAACTTAATCAAGTCA+AGG | 0.560272 | 2_2:-61944955 | Msa0262930:CDS |
| TGATAAGGACCGTGAAAGGA+AGG | 0.560715 | 2_2:-61944886 | Msa0262930:CDS |
| GCAACTTGAAGGTCGGGAGA+AGG | 0.574045 | 2_2:-61944409 | Msa0262930:intron |
| TTTCTTAACAGGAATATGCA+AGG | 0.577105 | 2_2:+61945343 | None:intergenic |
| ATAGAACTTAATCAAGTCAA+GGG | 0.583347 | 2_2:-61944954 | Msa0262930:CDS |
| GGACCGTGAAAGGAAGGAAG+AGG | 0.585661 | 2_2:-61944880 | Msa0262930:CDS |
| AAGAGAAGCAATGTGAAGGA+TGG | 0.592055 | 2_2:-61944626 | Msa0262930:CDS |
| TCATTGCTGTGATCATGATA+GGG | 0.596216 | 2_2:+61945308 | None:intergenic |
| CAAAATTGAAGAATGTGTCA+AGG | 0.598746 | 2_2:-61938988 | Msa0262930:CDS |
| GAAACATTATGAAAACTGGA+TGG | 0.606274 | 2_2:-61944286 | Msa0262930:CDS |
| GATAGAACTTCATCAAGTCA+AGG | 0.606983 | 2_2:-61938888 | Msa0262930:CDS |
| TCAAAAGAGAAGCAATGTGA+AGG | 0.610847 | 2_2:-61944630 | Msa0262930:CDS |
| GGAGTTTGAATCAAAGATGG+AGG | 0.617704 | 2_2:-61944514 | Msa0262930:CDS |
| TCATCGTCGTTATCATCATA+CGG | 0.618345 | 2_2:+61939272 | None:intergenic |
| TTAAATGAGAAGCAACATGA+AGG | 0.618712 | 2_2:-61944252 | Msa0262930:CDS |
| ATATTGATAAGGACCGTGAA+AGG | 0.619247 | 2_2:-61944890 | Msa0262930:CDS |
| CGGGAAAACCTTGGTAACAA+AGG | 0.621414 | 2_2:+61945446 | None:intergenic |
| AAGGAAGGAAGAGGAACTCA+AGG | 0.628919 | 2_2:-61944871 | Msa0262930:CDS |
| GGTGATGGAGCATGAAGCAA+AGG | 0.629813 | 2_2:-61944226 | Msa0262930:intron |
| GAAGCTCGCAAGAAAATCCA+GGG | 0.635919 | 2_2:-61939011 | Msa0262930:CDS |
| AGAGCGCAAGCTAGAGCTCG+AGG | 0.641179 | 2_2:-61944985 | Msa0262930:CDS |
| CGGTTCGATTAAGAAATCAA+AGG | 0.648202 | 2_2:-61939306 | Msa0262930:CDS |
| GTTATCATCATACGGTGCTG+GGG | 0.667774 | 2_2:+61939280 | None:intergenic |
| AGCACACCTCTATTTGATGG+AGG | 0.669820 | 2_2:-61938949 | Msa0262930:CDS |
| TGTAAGGTCTTTCTTCAGCG+AGG | 0.674133 | 2_2:+61945247 | None:intergenic |
| GCAATGTGAAGGATGGCTGG+AGG | 0.686234 | 2_2:-61944619 | Msa0262930:CDS |
| AGTTTGTGGTAAAGGAAGGG+CGG | 0.686572 | 2_2:-61945034 | Msa0262930:intron |
| ACATTATGAAAACTGGATGG+AGG | 0.687349 | 2_2:-61944283 | Msa0262930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTTCTAACAATGTA+AGG | + | chr2_2:61939201-61939220 | None:intergenic | 15.0% |
| !! | ATTGTTAGAAAAATTATTTG+AGG | - | chr2_2:61939204-61939223 | Msa0262930:CDS | 15.0% |
| !!! | AAAAATTGATAATTGTATCA+AGG | - | chr2_2:61939372-61939391 | Msa0262930:CDS | 15.0% |
| !!! | AGTAAATTCATCAATTTTTT+GGG | + | chr2_2:61939590-61939609 | None:intergenic | 15.0% |
| !!! | AAGTAAATTCATCAATTTTT+TGG | + | chr2_2:61939591-61939610 | None:intergenic | 15.0% |
| !! | AAAAATTGATGAATTTACTT+TGG | - | chr2_2:61939591-61939610 | Msa0262930:intron | 15.0% |
| !!! | ATAATTCCTTTTAAGAAAAT+AGG | - | chr2_2:61940392-61940411 | Msa0262930:intron | 15.0% |
| !!! | GATTTAGATATTTTATCATA+TGG | - | chr2_2:61940760-61940779 | Msa0262930:intron | 15.0% |
| !!! | TAAATTCAGATACTTTTTTA+TGG | - | chr2_2:61942234-61942253 | Msa0262930:intron | 15.0% |
| !! | CAGAATTTATATATTAAACA+TGG | - | chr2_2:61942594-61942613 | Msa0262930:intron | 15.0% |
| !! | GAAACAAAAAAATAAGTTAA+GGG | + | chr2_2:61943205-61943224 | None:intergenic | 15.0% |
| !! | TTAATTTATCATATCATTTG+GGG | + | chr2_2:61943835-61943854 | None:intergenic | 15.0% |
| !! | GTTAATTTATCATATCATTT+GGG | + | chr2_2:61943836-61943855 | None:intergenic | 15.0% |
| !! | TGTTAATTTATCATATCATT+TGG | + | chr2_2:61943837-61943856 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCATGTTATTTG+TGG | - | chr2_2:61944088-61944107 | Msa0262930:intron | 15.0% |
| !!! | AAGTTTACATTTTTTTTACA+TGG | - | chr2_2:61944188-61944207 | Msa0262930:intron | 15.0% |
| !!! | ATTTTTAATCAAGAAAACAA+CGG | + | chr2_2:61944214-61944233 | None:intergenic | 15.0% |
| !! | ACATGTAATAATAACAATAA+TGG | - | chr2_2:61945022-61945041 | Msa0262930:CDS | 15.0% |
| !! | AAAAAGGAAATTATTTATGT+TGG | - | chr2_2:61945385-61945404 | Msa0262930:CDS | 15.0% |
| !! | TATTTGATAGAAAACTTGAT+TGG | - | chr2_2:61939421-61939440 | Msa0262930:intron | 20.0% |
| !!! | AGTCATTGATAATATTGATA+AGG | - | chr2_2:61939528-61939547 | Msa0262930:intron | 20.0% |
| !!! | CTAAAATACCATTTTTCAAT+TGG | - | chr2_2:61940331-61940350 | Msa0262930:intron | 20.0% |
| !!! | AGTTTTCCTATTTTCTTAAA+AGG | + | chr2_2:61940401-61940420 | None:intergenic | 20.0% |
| !!! | ATTAATTGAATGTTGATTAC+AGG | - | chr2_2:61940931-61940950 | Msa0262930:intron | 20.0% |
| !! | ACAAGTATTAAATATGTTTC+TGG | - | chr2_2:61941076-61941095 | Msa0262930:intron | 20.0% |
| !! | TTGAATCAATGATGTAAATT+GGG | - | chr2_2:61941507-61941526 | Msa0262930:intron | 20.0% |
| !!! | ACTTACTTTTCTAAACTTTT+AGG | - | chr2_2:61941533-61941552 | Msa0262930:intron | 20.0% |
| !! | AAGAGATAAATATGATGAAT+TGG | - | chr2_2:61941794-61941813 | Msa0262930:intron | 20.0% |
| !!! | ATTAGCTATATTTTCCAATT+TGG | + | chr2_2:61941909-61941928 | None:intergenic | 20.0% |
| !!! | AATGAATCCTTTTATGAAAT+AGG | - | chr2_2:61942190-61942209 | Msa0262930:intron | 20.0% |
| !!! | GTGGGTATATTTTATTTTTT+TGG | + | chr2_2:61942450-61942469 | None:intergenic | 20.0% |
| !!! | TTTTATATCAAAGATAAGGT+GGG | + | chr2_2:61942468-61942487 | None:intergenic | 20.0% |
| !!! | ATCCTTTTATATCAAAGATA+AGG | + | chr2_2:61942472-61942491 | None:intergenic | 20.0% |
| !!! | GAAGATTTTTTTTTTTGACT+AGG | - | chr2_2:61942647-61942666 | Msa0262930:intron | 20.0% |
| !!! | TATTAATCTTAAGCTTTGTT+TGG | + | chr2_2:61942829-61942848 | None:intergenic | 20.0% |
| !! | AAGATTAATACATTAGATGT+TGG | - | chr2_2:61942839-61942858 | Msa0262930:intron | 20.0% |
| !!! | TATCTCTTCTATTTTCTAAA+TGG | - | chr2_2:61942991-61943010 | Msa0262930:intron | 20.0% |
| !! | AACAAAAAAACTAGGAAAAT+TGG | + | chr2_2:61943042-61943061 | None:intergenic | 20.0% |
| !!! | AATTTTCCTAGTTTTTTTGT+TGG | - | chr2_2:61943041-61943060 | Msa0262930:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAA+GGG | + | chr2_2:61943116-61943135 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+AGG | + | chr2_2:61943489-61943508 | None:intergenic | 20.0% |
| !! | CGAAACAAAAAAATAAGTTA+AGG | + | chr2_2:61943206-61943225 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTTGTTTCGATT+TGG | - | chr2_2:61943209-61943228 | Msa0262930:intron | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | + | chr2_2:61943401-61943420 | None:intergenic | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | + | chr2_2:61943401-61943420 | None:intergenic | 20.0% |
| !!! | CTTATTTTTTGCTTTCATTT+TGG | + | chr2_2:61943366-61943385 | None:intergenic | 20.0% |
| !! | TGAAAGCAAAAAATAAGTTA+AGG | - | chr2_2:61943369-61943388 | Msa0262930:intron | 20.0% |
| !! | GAAAGCAAAAAATAAGTTAA+GGG | - | chr2_2:61943370-61943389 | Msa0262930:intron | 20.0% |
| !! | GAAACCAAAAAATAAGTTAA+GGG | - | chr2_2:61943401-61943420 | Msa0262930:intron | 20.0% |
| !!! | AACTATTAAAAGTTTCGTTT+TGG | + | chr2_2:61943428-61943447 | None:intergenic | 20.0% |
| !!! | AACGAAACTTTTAATAGTTA+AGG | - | chr2_2:61943429-61943448 | Msa0262930:intron | 20.0% |
| !!! | ACGAAACTTTTAATAGTTAA+GGG | - | chr2_2:61943430-61943449 | Msa0262930:intron | 20.0% |
| !! | AAGTTATTAACGTTACAATT+TGG | + | chr2_2:61943118-61943137 | None:intergenic | 20.0% |
| !! | ATTGTAACGTTAATAACTTA+TGG | - | chr2_2:61943489-61943508 | Msa0262930:intron | 20.0% |
| !! | TTGTAACGTTAATAACTTAT+GGG | - | chr2_2:61943490-61943509 | Msa0262930:intron | 20.0% |
| !! | AAAAGGCTTAATTAATGATT+TGG | + | chr2_2:61943548-61943567 | None:intergenic | 20.0% |
| !!! | TAAGTTCTAGTTAACAAAAA+AGG | + | chr2_2:61943565-61943584 | None:intergenic | 20.0% |
| !! | TGTAAAGTATGAAAAATGAT+AGG | - | chr2_2:61943643-61943662 | Msa0262930:intron | 20.0% |
| !! | GTAAAGTATGAAAAATGATA+GGG | - | chr2_2:61943644-61943663 | Msa0262930:intron | 20.0% |
| !! | GTTGAAGAAAAATATAGAAA+AGG | + | chr2_2:61944066-61944085 | None:intergenic | 20.0% |
| !!! | ATTCAAATCTCTATTTTCTT+TGG | - | chr2_2:61944232-61944251 | Msa0262930:CDS | 20.0% |
| !!! | AAGAACCTTTCAATTTTAAA+TGG | - | chr2_2:61944885-61944904 | Msa0262930:CDS | 20.0% |
| !!! | ATTTTAATTCTTGACGAAAT+AGG | + | chr2_2:61945202-61945221 | None:intergenic | 20.0% |
| !! | TATTTCGTCAAGAATTAAAA+TGG | - | chr2_2:61945201-61945220 | Msa0262930:CDS | 20.0% |
| !! | AGATCTTGAAAATAAGAAAA+AGG | - | chr2_2:61945369-61945388 | Msa0262930:CDS | 20.0% |
| ! | TATTCCTGTTAAGAAATCAA+AGG | - | chr2_2:61939093-61939112 | Msa0262930:CDS | 25.0% |
| !! | AATACCTTTGATTTCTTAAC+AGG | + | chr2_2:61939100-61939119 | None:intergenic | 25.0% |
| ! | AATTATTTGAGGATTGTAAG+AGG | - | chr2_2:61939215-61939234 | Msa0262930:CDS | 25.0% |
| ! | ATAGAACTTAATCAAGTCAA+GGG | - | chr2_2:61939475-61939494 | Msa0262930:intron | 25.0% |
| !!! | TGAATTTACTTTGGAATGTA+AGG | - | chr2_2:61939600-61939619 | Msa0262930:intron | 25.0% |
| ! | AACAGAAACATTATGAAAAC+TGG | - | chr2_2:61940139-61940158 | Msa0262930:intron | 25.0% |
| !!! | AAATACCATTTTTCAATTGG+TGG | - | chr2_2:61940334-61940353 | Msa0262930:intron | 25.0% |
| ! | AAGGGAACAATTAAATAAGA+TGG | - | chr2_2:61940364-61940383 | Msa0262930:intron | 25.0% |
| ! | AGGGAACAATTAAATAAGAT+GGG | - | chr2_2:61940365-61940384 | Msa0262930:intron | 25.0% |
| !!! | CTCTTGTTTAAATTTGCTAA+AGG | - | chr2_2:61940419-61940438 | Msa0262930:intron | 25.0% |
| ! | TAACAAAATACTAAGCAGAT+TGG | + | chr2_2:61940662-61940681 | None:intergenic | 25.0% |
| ! | TGTTCATATCTATTGTTACT+GGG | - | chr2_2:61940798-61940817 | Msa0262930:intron | 25.0% |
| !!! | AACTCTTATTAGGTTTGTTA+TGG | - | chr2_2:61940957-61940976 | Msa0262930:intron | 25.0% |
| ! | TACTTGTATAACAACAAGAT+TGG | + | chr2_2:61941146-61941165 | None:intergenic | 25.0% |
| !!! | TCACTGTTTGTTTTGTTAAT+TGG | - | chr2_2:61941169-61941188 | Msa0262930:intron | 25.0% |
| ! | TGGTATACAACTAAAACTAT+TGG | + | chr2_2:61941392-61941411 | None:intergenic | 25.0% |
| !!! | TTTACATCATTGATTCAAGA+CGG | + | chr2_2:61941505-61941524 | None:intergenic | 25.0% |
| ! | CTTGAATCAATGATGTAAAT+TGG | - | chr2_2:61941506-61941525 | Msa0262930:intron | 25.0% |
| ! | TCAAAACCATTTGAATATTG+TGG | + | chr2_2:61941659-61941678 | None:intergenic | 25.0% |
| ! | AAGATATAAAATCATCTGCT+AGG | - | chr2_2:61941726-61941745 | Msa0262930:intron | 25.0% |
| ! | CTATTACACATTCTCAAAAT+AGG | + | chr2_2:61941835-61941854 | None:intergenic | 25.0% |
| ! | ATTTGTGTTGCAATTCAAAT+TGG | - | chr2_2:61941858-61941877 | Msa0262930:intron | 25.0% |
| ! | ATAATAGTGTTATGAGATTC+TGG | - | chr2_2:61941976-61941995 | Msa0262930:intron | 25.0% |
| !!! | ATTTCTGTTATTTTCTCATG+TGG | - | chr2_2:61942004-61942023 | Msa0262930:intron | 25.0% |
| ! | AAGTTAAGTTAAACAAGTCA+TGG | - | chr2_2:61942385-61942404 | Msa0262930:intron | 25.0% |
| ! | AGTTTCGTTAACTAATTACA+TGG | + | chr2_2:61942423-61942442 | None:intergenic | 25.0% |
| !! | CTTTTATATCAAAGATAAGG+TGG | + | chr2_2:61942469-61942488 | None:intergenic | 25.0% |
| ! | CACCTTATCTTTGATATAAA+AGG | - | chr2_2:61942467-61942486 | Msa0262930:intron | 25.0% |
| ! | ATAGTTTATATCTGAAGAGT+TGG | + | chr2_2:61942763-61942782 | None:intergenic | 25.0% |
| !!! | TACATTAGATGTTGGTAATT+TGG | - | chr2_2:61942847-61942866 | Msa0262930:intron | 25.0% |
| ! | ACATCTTAGATGTTAATGTT+TGG | - | chr2_2:61942946-61942965 | Msa0262930:intron | 25.0% |
| !! | CTATTTTCTAAATGGTTTGA+TGG | - | chr2_2:61942999-61943018 | Msa0262930:intron | 25.0% |
| ! | ATTAAGCCAACAAAAAAACT+AGG | + | chr2_2:61943050-61943069 | None:intergenic | 25.0% |
| !!! | TGGTACCTTAACTTATTTTT+TGG | - | chr2_2:61943078-61943097 | Msa0262930:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr2_2:61943400-61943419 | None:intergenic | 25.0% |
| ! | GAAACCAAAAAGTAAGTTAA+GGG | + | chr2_2:61943145-61943164 | None:intergenic | 25.0% |
| ! | ACGAAACGTTTAATAGTTAA+GGG | + | chr2_2:61943176-61943195 | None:intergenic | 25.0% |
| ! | AACGAAACGTTTAATAGTTA+AGG | + | chr2_2:61943177-61943196 | None:intergenic | 25.0% |
| !! | AACTATTAAACGTTTCGTTT+TGG | - | chr2_2:61943178-61943197 | Msa0262930:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr2_2:61943400-61943419 | None:intergenic | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr2_2:61943089-61943108 | Msa0262930:intron | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | + | chr2_2:61943400-61943419 | None:intergenic | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | - | chr2_2:61943089-61943108 | Msa0262930:intron | 25.0% |
| ! | GATGAATGTATTAGAGTTAA+GGG | + | chr2_2:61943298-61943317 | None:intergenic | 25.0% |
| !!! | CTTATTTTTTGGTTTCGTTT+TGG | + | chr2_2:61943089-61943108 | None:intergenic | 25.0% |
| ! | CGAAACCAAAAAATAAGTTA+AGG | - | chr2_2:61943400-61943419 | Msa0262930:intron | 25.0% |
| ! | GAAATCCAAAAGTAACTTAA+GGG | - | chr2_2:61943461-61943480 | Msa0262930:intron | 25.0% |
| !!! | GTTATTTGTTGGTTACATTT+TGG | + | chr2_2:61943517-61943536 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr2_2:61943520-61943539 | Msa0262930:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr2_2:61943521-61943540 | Msa0262930:intron | 25.0% |
| ! | AAATGTAGAAAGTCTAACAT+TGG | + | chr2_2:61943773-61943792 | None:intergenic | 25.0% |
| ! | CGAAAAAACTATTTGTCTAA+CGG | - | chr2_2:61943880-61943899 | Msa0262930:intron | 25.0% |
| ! | TATATTCTTCTTCTTCTTCT+GGG | + | chr2_2:61944017-61944036 | None:intergenic | 25.0% |
| ! | TTATATTCTTCTTCTTCTTC+TGG | + | chr2_2:61944018-61944037 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAAAAGGCAACC+CGG | + | chr2_2:61944631-61944650 | None:intergenic | 25.0% |
| !!! | CTCTATTTTGAGTATTTTCT+AGG | - | chr2_2:61944680-61944699 | Msa0262930:CDS | 25.0% |
| ! | AATTTCTACAGTTGAATGAT+GGG | - | chr2_2:61944815-61944834 | Msa0262930:CDS | 25.0% |
| !!! | GATAAATCAAAGTTTTGTGT+TGG | - | chr2_2:61944851-61944870 | Msa0262930:CDS | 25.0% |
| !! | TCAATTAACATCCTTTTAAC+TGG | + | chr2_2:61945085-61945104 | None:intergenic | 25.0% |
| ! | ATTGGTAGAAAAATCATTTG+TGG | - | chr2_2:61945273-61945292 | Msa0262930:CDS | 25.0% |
| ! | TTGGTAGAAAAATCATTTGT+GGG | - | chr2_2:61945274-61945293 | Msa0262930:CDS | 25.0% |
| ! | CATAACCCTCAATTTTATGT+TGG | - | chr2_2:61938902-61938921 | Msa0262930:CDS | 30.0% |
| CATCACCAACATAAAATTGA+GGG | + | chr2_2:61938910-61938929 | None:intergenic | 30.0% | |
| TCATCACCAACATAAAATTG+AGG | + | chr2_2:61938911-61938930 | None:intergenic | 30.0% | |
| !!! | AATTTTATGTTGGTGATGAG+AGG | - | chr2_2:61938912-61938931 | Msa0262930:CDS | 30.0% |
| !!! | ATTTTATGTTGGTGATGAGA+GGG | - | chr2_2:61938913-61938932 | Msa0262930:CDS | 30.0% |
| TTTCTTAACAGGAATATGCA+AGG | + | chr2_2:61939089-61939108 | None:intergenic | 30.0% | |
| TAATTGTATCAAGGAGTTTG+TGG | - | chr2_2:61939381-61939400 | Msa0262930:intron | 30.0% | |
| GATAGAACTTAATCAAGTCA+AGG | - | chr2_2:61939474-61939493 | Msa0262930:intron | 30.0% | |
| GATGCAGTGAACAAATTAAT+TGG | - | chr2_2:61939640-61939659 | Msa0262930:intron | 30.0% | |
| CAGAAAAATTAGAGTCTGAA+AGG | - | chr2_2:61939671-61939690 | Msa0262930:intron | 30.0% | |
| TTGTGCTCAAATGAAAGAAT+TGG | - | chr2_2:61939732-61939751 | Msa0262930:intron | 30.0% | |
| TCAAAAAAGATGCAACTTGA+AGG | - | chr2_2:61940009-61940028 | Msa0262930:intron | 30.0% | |
| GAAGGAGTTTAAATCAAAAG+AGG | - | chr2_2:61940038-61940057 | Msa0262930:intron | 30.0% | |
| GAAACATTATGAAAACTGGA+TGG | - | chr2_2:61940143-61940162 | Msa0262930:intron | 30.0% | |
| TTAAATGAGAAGCAACATGA+AGG | - | chr2_2:61940177-61940196 | Msa0262930:intron | 30.0% | |
| ATGATAAGTAAAACCTATGC+AGG | - | chr2_2:61940455-61940474 | Msa0262930:intron | 30.0% | |
| AACAATTCAATTTCCTGCAT+AGG | + | chr2_2:61940471-61940490 | None:intergenic | 30.0% | |
| TAACAAATGAGACAACAGTT+GGG | + | chr2_2:61940519-61940538 | None:intergenic | 30.0% | |
| TTAACAAATGAGACAACAGT+TGG | + | chr2_2:61940520-61940539 | None:intergenic | 30.0% | |
| TGTCAAAACCGTTTAGAAAA+TGG | + | chr2_2:61940621-61940640 | None:intergenic | 30.0% | |
| ATTAATGTCTGTTTGCAACT+TGG | - | chr2_2:61940698-61940717 | Msa0262930:intron | 30.0% | |
| TTAATGTCTGTTTGCAACTT+GGG | - | chr2_2:61940699-61940718 | Msa0262930:intron | 30.0% | |
| ! | GGTTTTGCAAATAAAGTTTC+TGG | - | chr2_2:61940720-61940739 | Msa0262930:intron | 30.0% |
| GTGTTCATATCTATTGTTAC+TGG | - | chr2_2:61940797-61940816 | Msa0262930:intron | 30.0% | |
| AATCAACACTCAAACCTAAA+TGG | + | chr2_2:61940868-61940887 | None:intergenic | 30.0% | |
| TTACAGGTGTAACTCTTATT+AGG | - | chr2_2:61940947-61940966 | Msa0262930:intron | 30.0% | |
| !!! | CTGTTTGTTTTGTTAATTGG+TGG | - | chr2_2:61941172-61941191 | Msa0262930:intron | 30.0% |
| ! | ATAGAGACTTCTATGTGTTT+TGG | - | chr2_2:61941219-61941238 | Msa0262930:intron | 30.0% |
| !! | ATGATGTTATGATGTCGTTT+TGG | - | chr2_2:61941296-61941315 | Msa0262930:intron | 30.0% |
| AACAAACAGAAGCAAAACAA+TGG | + | chr2_2:61941335-61941354 | None:intergenic | 30.0% | |
| !! | ATTGTTGTTTCCTTCTTACT+TGG | + | chr2_2:61941441-61941460 | None:intergenic | 30.0% |
| !! | GGGCTTACTTTTAATGATAT+AGG | - | chr2_2:61941616-61941635 | Msa0262930:intron | 30.0% |
| TTTAATGATATAGGCACTCA+AGG | - | chr2_2:61941625-61941644 | Msa0262930:intron | 30.0% | |
| ATCGAACCACAATATTCAAA+TGG | - | chr2_2:61941650-61941669 | Msa0262930:intron | 30.0% | |
| ! | TCAACTTTTCTCCTATATCA+TGG | + | chr2_2:61941757-61941776 | None:intergenic | 30.0% |
| GAGTTGTCCTATTTCATAAA+AGG | + | chr2_2:61942200-61942219 | None:intergenic | 30.0% | |
| !! | TTAGTGTTTTTGTGTGTATC+CGG | + | chr2_2:61942275-61942294 | None:intergenic | 30.0% |
| AAAAACACTAAGGCTATGTT+TGG | - | chr2_2:61942284-61942303 | Msa0262930:intron | 30.0% | |
| ATCTCAATTAACTCGACATT+AGG | + | chr2_2:61942620-61942639 | None:intergenic | 30.0% | |
| !!! | TTTTTTGACTAGGAGATCAA+TGG | - | chr2_2:61942657-61942676 | Msa0262930:intron | 30.0% |
| !!! | TGTTGGCTTAATTACTCTTT+TGG | - | chr2_2:61943058-61943077 | Msa0262930:intron | 30.0% |
| !! | TGATCCCTTAACTTACTTTT+TGG | - | chr2_2:61943138-61943157 | Msa0262930:intron | 30.0% |
| CGAAACCAAAAAGTAAGTTA+AGG | + | chr2_2:61943146-61943165 | None:intergenic | 30.0% | |
| !!! | CTTACTTTTTGGTTTCGTTT+TGG | - | chr2_2:61943149-61943168 | Msa0262930:intron | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr2_2:61943198-61943217 | Msa0262930:intron | 30.0% |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | - | chr2_2:61943198-61943217 | Msa0262930:intron | 30.0% |
| GGATGAATGTATTAGAGTTA+AGG | + | chr2_2:61943299-61943318 | None:intergenic | 30.0% | |
| !!! | TGGTCCCTTAACTTATTTTT+TGG | + | chr2_2:61943198-61943217 | None:intergenic | 30.0% |
| !!! | GTTACTTTTGGATTTCGTTT+TGG | + | chr2_2:61943457-61943476 | None:intergenic | 30.0% |
| CGAAATCCAAAAGTAACTTA+AGG | - | chr2_2:61943460-61943479 | Msa0262930:intron | 30.0% | |
| TATGTGTCAATGACTTTGAT+AGG | - | chr2_2:61943587-61943606 | Msa0262930:intron | 30.0% | |
| !!! | GGGGAGTTTTAAATTTTGTT+GGG | + | chr2_2:61943997-61944016 | None:intergenic | 30.0% |
| !!! | TGGGGAGTTTTAAATTTTGT+TGG | + | chr2_2:61943998-61944017 | None:intergenic | 30.0% |
| ATATTCTTCTTCTTCTTCTG+GGG | + | chr2_2:61944016-61944035 | None:intergenic | 30.0% | |
| AGGAGTTAAAACACATACAA+AGG | + | chr2_2:61944313-61944332 | None:intergenic | 30.0% | |
| ! | AAACAGACATGTCAACTTTT+GGG | + | chr2_2:61944360-61944379 | None:intergenic | 30.0% |
| ! | AAAACAGACATGTCAACTTT+TGG | + | chr2_2:61944361-61944380 | None:intergenic | 30.0% |
| AGTCTCTTGTGTAAAAAACA+GGG | - | chr2_2:61944534-61944553 | Msa0262930:CDS | 30.0% | |
| GCTATGTACAATACATCAAA+TGG | - | chr2_2:61944561-61944580 | Msa0262930:CDS | 30.0% | |
| ATGTACAATACATCAAATGG+TGG | - | chr2_2:61944564-61944583 | Msa0262930:CDS | 30.0% | |
| TGTACAATACATCAAATGGT+GGG | - | chr2_2:61944565-61944584 | Msa0262930:CDS | 30.0% | |
| TGTAGAAATTGTCAACTCTT+GGG | + | chr2_2:61944805-61944824 | None:intergenic | 30.0% | |
| CAATTTCTACAGTTGAATGA+TGG | - | chr2_2:61944814-61944833 | Msa0262930:CDS | 30.0% | |
| ! | GCAAGCCATTTAAAATTGAA+AGG | + | chr2_2:61944893-61944912 | None:intergenic | 30.0% |
| ! | ATAATGGTTCTGTTAAGAAG+AGG | - | chr2_2:61945038-61945057 | Msa0262930:intron | 30.0% |
| ! | TAATGGTTCTGTTAAGAAGA+GGG | - | chr2_2:61945039-61945058 | Msa0262930:intron | 30.0% |
| GTAATACACTACCAGTTAAA+AGG | - | chr2_2:61945071-61945090 | Msa0262930:intron | 30.0% | |
| CAAAATTGAAGAATGTGTCA+AGG | - | chr2_2:61945441-61945460 | Msa0262930:CDS | 30.0% | |
| ATCATCTTCCTTTGTTACCA+AGG | - | chr2_2:61938975-61938994 | Msa0262930:CDS | 35.0% | |
| ! | ATTTTTCCAAACTCGAAACC+CGG | + | chr2_2:61939006-61939025 | None:intergenic | 35.0% |
| ! | TAGTAGTGCTGTTAAGAAGA+GGG | - | chr2_2:61939036-61939055 | Msa0262930:CDS | 35.0% |
| TCATTGCTGTGATCATGATA+GGG | + | chr2_2:61939124-61939143 | None:intergenic | 35.0% | |
| ATCATTGCTGTGATCATGAT+AGG | + | chr2_2:61939125-61939144 | None:intergenic | 35.0% | |
| TATCAAGGAGTTTGTGGTAA+AGG | - | chr2_2:61939387-61939406 | Msa0262930:intron | 35.0% | |
| ATATTGATAAGGACCGTGAA+AGG | - | chr2_2:61939539-61939558 | Msa0262930:intron | 35.0% | |
| TGAAAGGAACAAGTTGCTAA+AGG | - | chr2_2:61939687-61939706 | Msa0262930:intron | 35.0% | |
| ! | AGCACAATCATTCTCCTTTT+CGG | + | chr2_2:61939719-61939738 | None:intergenic | 35.0% |
| TCAAAAGAGAAGCAATGTGA+AGG | - | chr2_2:61939799-61939818 | Msa0262930:intron | 35.0% | |
| GAAGGAGTTTGAATCAAAGA+TGG | - | chr2_2:61939912-61939931 | Msa0262930:intron | 35.0% | |
| AAAAGATGCAACTTGAAGGT+CGG | - | chr2_2:61940013-61940032 | Msa0262930:intron | 35.0% | |
| TCAAAAGAGGAGAAAGTTGA+AGG | - | chr2_2:61940051-61940070 | Msa0262930:intron | 35.0% | |
| TAAATTCCAGCTCCTTGATT+TGG | + | chr2_2:61940077-61940096 | None:intergenic | 35.0% | |
| CAAGGAGCTGGAATTTAAAA+AGG | - | chr2_2:61940080-61940099 | Msa0262930:intron | 35.0% | |
| ! | GCACTTTGAAAGTCAAATGA+AGG | - | chr2_2:61940104-61940123 | Msa0262930:intron | 35.0% |
| TGAAAGTCAAATGAAGGAGT+TGG | - | chr2_2:61940110-61940129 | Msa0262930:intron | 35.0% | |
| ACATTATGAAAACTGGATGG+AGG | - | chr2_2:61940146-61940165 | Msa0262930:intron | 35.0% | |
| GTTGCTTCTCATTTAAGTCA+AGG | + | chr2_2:61940173-61940192 | None:intergenic | 35.0% | |
| AGAATTTGAAGGCAAAGTGA+AGG | - | chr2_2:61940230-61940249 | Msa0262930:intron | 35.0% | |
| TCAAAAGAGAGGCAAAATCA+AGG | - | chr2_2:61940303-61940322 | Msa0262930:intron | 35.0% | |
| CTGATCCACCAATTGAAAAA+TGG | + | chr2_2:61940342-61940361 | None:intergenic | 35.0% | |
| ! | TTCAATTGGTGGATCAGAAA+AGG | - | chr2_2:61940345-61940364 | Msa0262930:intron | 35.0% |
| ! | TCAATTGGTGGATCAGAAAA+GGG | - | chr2_2:61940346-61940365 | Msa0262930:intron | 35.0% |
| AACAAATGAGACAACAGTTG+GGG | + | chr2_2:61940518-61940537 | None:intergenic | 35.0% | |
| GACATCTTAGTGTTAATGCT+TGG | - | chr2_2:61940549-61940568 | Msa0262930:intron | 35.0% | |
| ! | CGTCTCTTCCATTTTCTAAA+CGG | - | chr2_2:61940610-61940629 | Msa0262930:intron | 35.0% |
| TCTCAAAGACTAGCAACTTA+AGG | + | chr2_2:61940840-61940859 | None:intergenic | 35.0% | |
| !! | AAGTTGCTAGTCTTTGAGAT+AGG | - | chr2_2:61940841-61940860 | Msa0262930:intron | 35.0% |
| !! | AGTTGCTAGTCTTTGAGATA+GGG | - | chr2_2:61940842-61940861 | Msa0262930:intron | 35.0% |
| !! | TAGGTTTGAGTGTTGATTAC+CGG | - | chr2_2:61940870-61940889 | Msa0262930:intron | 35.0% |
| AACTGTTAGCTATTGATGCT+TGG | - | chr2_2:61941003-61941022 | Msa0262930:intron | 35.0% | |
| ACATAGAAGTCTCTATCAAC+CGG | + | chr2_2:61941215-61941234 | None:intergenic | 35.0% | |
| ! | CCTTGCTATAGCTTCATTAT+CGG | + | chr2_2:61941366-61941385 | None:intergenic | 35.0% |
| CTAGTCAATTACACTTGTTC+TGG | + | chr2_2:61941412-61941431 | None:intergenic | 35.0% | |
| ! | TTGATGTATGCTATTTGCCA+AGG | - | chr2_2:61941562-61941581 | Msa0262930:intron | 35.0% |
| ! | TGATGTATGCTATTTGCCAA+GGG | - | chr2_2:61941563-61941582 | Msa0262930:intron | 35.0% |
| AGTCTGATAGCAGATAACAA+TGG | + | chr2_2:61942092-61942111 | None:intergenic | 35.0% | |
| TCTCATAGACTAGCAACTAT+AGG | + | chr2_2:61942151-61942170 | None:intergenic | 35.0% | |
| ! | GCTAGTCTATGAGATAGTAA+AGG | - | chr2_2:61942157-61942176 | Msa0262930:intron | 35.0% |
| ATGGTAAGTGAAAACTATGC+CGG | - | chr2_2:61942253-61942272 | Msa0262930:intron | 35.0% | |
| GGATACACACAAAAACACTA+AGG | - | chr2_2:61942274-61942293 | Msa0262930:intron | 35.0% | |
| GTCGAGTTAATTGAGATCAA+TGG | - | chr2_2:61942623-61942642 | Msa0262930:intron | 35.0% | |
| AAATGACAGAACTTTCAGAG+GGG | + | chr2_2:61942909-61942928 | None:intergenic | 35.0% | |
| CAAATGACAGAACTTTCAGA+GGG | + | chr2_2:61942910-61942929 | None:intergenic | 35.0% | |
| ACAAATGACAGAACTTTCAG+AGG | + | chr2_2:61942911-61942930 | None:intergenic | 35.0% | |
| TAAAAGACCAAAGTGGTTGA+CGG | - | chr2_2:61943324-61943343 | Msa0262930:intron | 35.0% | |
| !! | TTGGTCCCTTAAGTTACTTT+TGG | + | chr2_2:61943469-61943488 | None:intergenic | 35.0% |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr2_2:61943528-61943547 | None:intergenic | 35.0% | |
| CTGGTTAAGGAAACTAAAAG+AGG | - | chr2_2:61943690-61943709 | Msa0262930:intron | 35.0% | |
| !! | TTGGGATTTTGAGAGTGAAA+TGG | + | chr2_2:61943979-61943998 | None:intergenic | 35.0% |
| !!! | GTTTTAACTCCTTATCCCTT+AGG | - | chr2_2:61944321-61944340 | Msa0262930:CDS | 35.0% |
| ! | AACAGACATGTCAACTTTTG+GGG | + | chr2_2:61944359-61944378 | None:intergenic | 35.0% |
| ! | AGTTGACATGTCTGTTTTCT+AGG | - | chr2_2:61944363-61944382 | Msa0262930:CDS | 35.0% |
| CAGTCTCTTGTGTAAAAAAC+AGG | - | chr2_2:61944533-61944552 | Msa0262930:CDS | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr2_2:61944539-61944558 | Msa0262930:CDS | 35.0% | |
| ! | AGCTTTTATCTTTTCTTCCC+AGG | - | chr2_2:61944759-61944778 | Msa0262930:intron | 35.0% |
| TATGAACACCTCAAAATCCT+GGG | + | chr2_2:61944779-61944798 | None:intergenic | 35.0% | |
| TTATGAACACCTCAAAATCC+TGG | + | chr2_2:61944780-61944799 | None:intergenic | 35.0% | |
| CTGTAGAAATTGTCAACTCT+TGG | + | chr2_2:61944806-61944825 | None:intergenic | 35.0% | |
| TGTGAAGACTTTGAATCTGA+AGG | - | chr2_2:61944947-61944966 | Msa0262930:CDS | 35.0% | |
| AGCAATGATTCCTCAGATTA+TGG | - | chr2_2:61944991-61945010 | Msa0262930:CDS | 35.0% | |
| GCAATGATTCCTCAGATTAT+GGG | - | chr2_2:61944992-61945011 | Msa0262930:CDS | 35.0% | |
| CGGTTCGATTAAGAAATCAA+AGG | - | chr2_2:61945123-61945142 | Msa0262930:CDS | 35.0% | |
| TCATCGTCGTTATCATCATA+CGG | + | chr2_2:61945160-61945179 | None:intergenic | 35.0% | |
| GCTGAAGAAAGAACTCAAAT+TGG | - | chr2_2:61945255-61945274 | Msa0262930:CDS | 35.0% | |
| ! | AATCATTTGTGGGTTGCAAA+AGG | - | chr2_2:61945284-61945303 | Msa0262930:CDS | 35.0% |
| ! | TGTCAAGGATTTTGTAGCAA+AGG | - | chr2_2:61945456-61945475 | Msa0262930:CDS | 35.0% |
| TATTTGATGGAGGACTTGAT+TGG | - | chr2_2:61945490-61945509 | Msa0262930:CDS | 35.0% | |
| GATAGAACTTCATCAAGTCA+AGG | - | chr2_2:61945541-61945560 | Msa0262930:CDS | 35.0% | |
| ! | CTTTGTTACCAAGGTTTTCC+CGG | - | chr2_2:61938984-61939003 | Msa0262930:CDS | 40.0% |
| ! | TTTGTTACCAAGGTTTTCCC+GGG | - | chr2_2:61938985-61939004 | Msa0262930:CDS | 40.0% |
| ! | TTTTTCCAAACTCGAAACCC+GGG | + | chr2_2:61939005-61939024 | None:intergenic | 40.0% |
| ! | GTAGTAGTGCTGTTAAGAAG+AGG | - | chr2_2:61939035-61939054 | Msa0262930:CDS | 40.0% |
| GTCCATCAAGACAGATATTG+AGG | - | chr2_2:61939267-61939286 | Msa0262930:CDS | 40.0% | |
| GTCCTCAATATCTGTCTTGA+TGG | + | chr2_2:61939272-61939291 | None:intergenic | 40.0% | |
| ! | TGAAGTTCATCAGAAAGTGC+AGG | - | chr2_2:61939348-61939367 | Msa0262930:CDS | 40.0% |
| AAGGAGTTTGTGGTAAAGGA+AGG | - | chr2_2:61939391-61939410 | Msa0262930:intron | 40.0% | |
| AGGAGTTTGTGGTAAAGGAA+GGG | - | chr2_2:61939392-61939411 | Msa0262930:intron | 40.0% | |
| ! | ACAATCATTCTCCTTTTCGG+AGG | + | chr2_2:61939716-61939735 | None:intergenic | 40.0% |
| AAGAGAAGCAATGTGAAGGA+TGG | - | chr2_2:61939803-61939822 | Msa0262930:intron | 40.0% | |
| AATGCTTCTCCTTTGACTCA+AGG | + | chr2_2:61939837-61939856 | None:intergenic | 40.0% | |
| !!! | GTCAAAGGAGAAGCATTTTG+AGG | - | chr2_2:61939840-61939859 | Msa0262930:intron | 40.0% |
| !!! | AGGAGAAGCATTTTGAGGTA+CGG | - | chr2_2:61939845-61939864 | Msa0262930:intron | 40.0% |
| GCAGCTTGAAGGATATATGA+AGG | - | chr2_2:61939894-61939913 | Msa0262930:intron | 40.0% | |
| GGAGTTTGAATCAAAGATGG+AGG | - | chr2_2:61939915-61939934 | Msa0262930:intron | 40.0% | |
| TCAAAGATGGAGGAACTTGA+AGG | - | chr2_2:61939925-61939944 | Msa0262930:intron | 40.0% | |
| AAGAGAAGCTAGTTGAACGA+CGG | - | chr2_2:61939971-61939990 | Msa0262930:intron | 40.0% | |
| AAAGATGCAACTTGAAGGTC+GGG | - | chr2_2:61940014-61940033 | Msa0262930:intron | 40.0% | |
| GAAAGTTGAAGGCCAAATCA+AGG | - | chr2_2:61940062-61940081 | Msa0262930:intron | 40.0% | |
| GCAAAGGTGAGAGAATTTGA+AGG | - | chr2_2:61940219-61940238 | Msa0262930:intron | 40.0% | |
| !! | GAAGCATTTTGAAAGCCAAG+TGG | - | chr2_2:61940269-61940288 | Msa0262930:intron | 40.0% |
| AGGAGCTCAAATCAAAAGAG+AGG | - | chr2_2:61940292-61940311 | Msa0262930:intron | 40.0% | |
| ACAAATGAGACAACAGTTGG+GGG | + | chr2_2:61940517-61940536 | None:intergenic | 40.0% | |
| !! | TCTTTGAGATAGGGCCATTT+AGG | - | chr2_2:61940851-61940870 | Msa0262930:intron | 40.0% |
| TTAGCTATTGATGCTTGGCT+TGG | - | chr2_2:61941008-61941027 | Msa0262930:intron | 40.0% | |
| TAGCTATTGATGCTTGGCTT+GGG | - | chr2_2:61941009-61941028 | Msa0262930:intron | 40.0% | |
| AACAAAACCCACTACTACCT+GGG | + | chr2_2:61941115-61941134 | None:intergenic | 40.0% | |
| TAACAAAACCCACTACTACC+TGG | + | chr2_2:61941116-61941135 | None:intergenic | 40.0% | |
| CCGATAATGAAGCTATAGCA+AGG | - | chr2_2:61941363-61941382 | Msa0262930:intron | 40.0% | |
| CTAGAGAGAACCAAGTAAGA+AGG | - | chr2_2:61941428-61941447 | Msa0262930:intron | 40.0% | |
| ! | TGCCAAGGGTATGTTTGAAA+TGG | - | chr2_2:61941577-61941596 | Msa0262930:intron | 40.0% |
| ! | GCCAAGGGTATGTTTGAAAT+GGG | - | chr2_2:61941578-61941597 | Msa0262930:intron | 40.0% |
| ! | CCAAGGGTATGTTTGAAATG+GGG | - | chr2_2:61941579-61941598 | Msa0262930:intron | 40.0% |
| ! | CAAGGGTATGTTTGAAATGG+GGG | - | chr2_2:61941580-61941599 | Msa0262930:intron | 40.0% |
| ! | AAGGGTATGTTTGAAATGGG+GGG | - | chr2_2:61941581-61941600 | Msa0262930:intron | 40.0% |
| ! | ATGTTTGAAATGGGGGGTTT+AGG | - | chr2_2:61941587-61941606 | Msa0262930:intron | 40.0% |
| ! | GCTAGGTTGAACCATGATAT+AGG | - | chr2_2:61941743-61941762 | Msa0262930:intron | 40.0% |
| ! | GATCACAAGTTGAGCCAAAT+TGG | - | chr2_2:61941892-61941911 | Msa0262930:intron | 40.0% |
| GATAGCAGATAACAATGGCA+GGG | + | chr2_2:61942087-61942106 | None:intergenic | 40.0% | |
| TGATAGCAGATAACAATGGC+AGG | + | chr2_2:61942088-61942107 | None:intergenic | 40.0% | |
| TGTTATCTGCTATCAGACTG+AGG | - | chr2_2:61942093-61942112 | Msa0262930:intron | 40.0% | |
| CTATCAGACTGAGGTAGTTA+TGG | - | chr2_2:61942102-61942121 | Msa0262930:intron | 40.0% | |
| AAATCGAAACCCCTTTATGC+AGG | - | chr2_2:61942516-61942535 | Msa0262930:intron | 40.0% | |
| AATGACAGAACTTTCAGAGG+GGG | + | chr2_2:61942908-61942927 | None:intergenic | 40.0% | |
| !! | CCACTTTGGTCTTTTACGTT+AGG | + | chr2_2:61943320-61943339 | None:intergenic | 40.0% |
| CCTAACGTAAAAGACCAAAG+TGG | - | chr2_2:61943317-61943336 | Msa0262930:intron | 40.0% | |
| ! | TGTTGTTTGCCTACGAGATT+TGG | + | chr2_2:61943930-61943949 | None:intergenic | 40.0% |
| GAATAAGACAGACACAGACA+AGG | + | chr2_2:61943954-61943973 | None:intergenic | 40.0% | |
| ! | ACAGACATGTCAACTTTTGG+GGG | + | chr2_2:61944358-61944377 | None:intergenic | 40.0% |
| TATTGCCATTGTCTTGAGAC+CGG | - | chr2_2:61944484-61944503 | Msa0262930:intron | 40.0% | |
| TTACACAAGAGACTGTTTCC+AGG | + | chr2_2:61944528-61944547 | None:intergenic | 40.0% | |
| ! | CTTTTCTTCCCAGGATTTTG+AGG | - | chr2_2:61944768-61944787 | Msa0262930:intron | 40.0% |
| !!! | CAGTTGAATGATGGGTTTTG+AGG | - | chr2_2:61944823-61944842 | Msa0262930:CDS | 40.0% |
| TGAGGAATCATTGCTGACAA+AGG | + | chr2_2:61944986-61945005 | None:intergenic | 40.0% | |
| GTTCTCAAACCCATAATCTG+AGG | + | chr2_2:61945004-61945023 | None:intergenic | 40.0% | |
| GTTAAGAAGAGGGATACTTC+TGG | - | chr2_2:61945049-61945068 | Msa0262930:intron | 40.0% | |
| GATAACAACAATGCCTTGCA+CGG | - | chr2_2:61945103-61945122 | Msa0262930:CDS | 40.0% | |
| TTTCTTAATCGAACCGTGCA+AGG | + | chr2_2:61945119-61945138 | None:intergenic | 40.0% | |
| GTCCATAAAGAGAGAGATTG+AGG | - | chr2_2:61945336-61945355 | Msa0262930:intron | 40.0% | |
| CTCCTCAATCTCTCTCTTTA+TGG | + | chr2_2:61945341-61945360 | None:intergenic | 40.0% | |
| ! | CACATTCTTCAATTTTGCCC+TGG | + | chr2_2:61945438-61945457 | None:intergenic | 40.0% |
| TCAAGTCCTCCATCAAATAG+AGG | + | chr2_2:61945489-61945508 | None:intergenic | 40.0% | |
| ! | CGGGAAAACCTTGGTAACAA+AGG | + | chr2_2:61938986-61939005 | None:intergenic | 45.0% |
| TGTAAGGTCTTTCTTCAGCG+AGG | + | chr2_2:61939185-61939204 | None:intergenic | 45.0% | |
| AGTTTGTGGTAAAGGAAGGG+CGG | - | chr2_2:61939395-61939414 | Msa0262930:intron | 45.0% | |
| TGATAAGGACCGTGAAAGGA+AGG | - | chr2_2:61939543-61939562 | Msa0262930:intron | 45.0% | |
| GTTCCTCTTCCTTCCTTTCA+CGG | + | chr2_2:61939555-61939574 | None:intergenic | 45.0% | |
| AAGGAAGGAAGAGGAACTCA+AGG | - | chr2_2:61939558-61939577 | Msa0262930:intron | 45.0% | |
| TGCATCAAGCTCGTTCTCTT+TGG | + | chr2_2:61939626-61939645 | None:intergenic | 45.0% | |
| GCTAAAGGTAACCTCCGAAA+AGG | - | chr2_2:61939702-61939721 | Msa0262930:intron | 45.0% | |
| TCAACGAAGAAGCGACTTGA+AGG | - | chr2_2:61939757-61939776 | Msa0262930:intron | 45.0% | |
| !!! | GGAGAAGCATTTTGAGGTAC+GGG | - | chr2_2:61939846-61939865 | Msa0262930:intron | 45.0% |
| !!! | GCATTTTGAGGTACGGGTAA+AGG | - | chr2_2:61939852-61939871 | Msa0262930:intron | 45.0% |
| TCAAGAGAGAAGCAGCTTGA+AGG | - | chr2_2:61939883-61939902 | Msa0262930:intron | 45.0% | |
| GGAACTTGAAGGTCGTTCAA+AGG | - | chr2_2:61939936-61939955 | Msa0262930:intron | 45.0% | |
| AGAGAAGCTAGTTGAACGAC+GGG | - | chr2_2:61939972-61939991 | Msa0262930:intron | 45.0% | |
| ATGAGAAGCAACATGAAGGC+CGG | - | chr2_2:61940181-61940200 | Msa0262930:intron | 45.0% | |
| TGAAGGCAAAGTGAAGGATC+TGG | - | chr2_2:61940236-61940255 | Msa0262930:intron | 45.0% | |
| !! | GCATTTTGAAAGCCAAGTGG+AGG | - | chr2_2:61940272-61940291 | Msa0262930:intron | 45.0% |
| ! | TTGATTTGAGCTCCTCCACT+TGG | + | chr2_2:61940287-61940306 | None:intergenic | 45.0% |
| GCACTGAGAAAGAGTTACAC+CGG | + | chr2_2:61940892-61940911 | None:intergenic | 45.0% | |
| GGCTGTTAAGTGAATGTTGC+CGG | - | chr2_2:61941193-61941212 | Msa0262930:intron | 45.0% | |
| CCCCATTTCAAACATACCCT+TGG | + | chr2_2:61941582-61941601 | None:intergenic | 45.0% | |
| ! | TTTGAAATGGGGGGTTTAGG+AGG | - | chr2_2:61941590-61941609 | Msa0262930:intron | 45.0% |
| TTGAAATGGGGGGTTTAGGA+GGG | - | chr2_2:61941591-61941610 | Msa0262930:intron | 45.0% | |
| CTTCTCAGTCCTGCATAAAG+GGG | + | chr2_2:61942528-61942547 | None:intergenic | 45.0% | |
| CCTTCTCAGTCCTGCATAAA+GGG | + | chr2_2:61942529-61942548 | None:intergenic | 45.0% | |
| TCCTTCTCAGTCCTGCATAA+AGG | + | chr2_2:61942530-61942549 | None:intergenic | 45.0% | |
| ATGACAGAACTTTCAGAGGG+GGG | + | chr2_2:61942907-61942926 | None:intergenic | 45.0% | |
| GTTGACGGAGGAAGAGTTAA+GGG | - | chr2_2:61943339-61943358 | Msa0262930:intron | 45.0% | |
| TGATTCCTTAACCAGTGTCC+CGG | - | chr2_2:61943792-61943811 | Msa0262930:intron | 45.0% | |
| GAAATGTTAACTAGTGCCCC+GGG | + | chr2_2:61943813-61943832 | None:intergenic | 45.0% | |
| GGAAATGTTAACTAGTGCCC+CGG | + | chr2_2:61943814-61943833 | None:intergenic | 45.0% | |
| TGTCTAACGGCTCACTGAAT+TGG | - | chr2_2:61943893-61943912 | Msa0262930:intron | 45.0% | |
| GTCTAACGGCTCACTGAATT+GGG | - | chr2_2:61943894-61943913 | Msa0262930:intron | 45.0% | |
| ! | TTGCCTACGAGATTTGGTTG+AGG | + | chr2_2:61943924-61943943 | None:intergenic | 45.0% |
| !! | ATGTCAACTTTTGGGGGTTG+GGG | + | chr2_2:61944352-61944371 | None:intergenic | 45.0% |
| !! | CATGTCAACTTTTGGGGGTT+GGG | + | chr2_2:61944353-61944372 | None:intergenic | 45.0% |
| !! | ACATGTCAACTTTTGGGGGT+TGG | + | chr2_2:61944354-61944373 | None:intergenic | 45.0% |
| ! | GTTATCATCATACGGTGCTG+GGG | + | chr2_2:61945152-61945171 | None:intergenic | 45.0% |
| CGTTATCATCATACGGTGCT+GGG | + | chr2_2:61945153-61945172 | None:intergenic | 45.0% | |
| TCGTTATCATCATACGGTGC+TGG | + | chr2_2:61945154-61945173 | None:intergenic | 45.0% | |
| GAAGCTCGCAAGAAAATCCA+GGG | - | chr2_2:61945418-61945437 | Msa0262930:CDS | 45.0% | |
| ! | GGAAGCACACCTCTATTTGA+TGG | - | chr2_2:61945477-61945496 | Msa0262930:CDS | 45.0% |
| AGCACACCTCTATTTGATGG+AGG | - | chr2_2:61945480-61945499 | Msa0262930:CDS | 45.0% | |
| !! | ACAATAAAAAAAAAAAAAAA+AGG | + | chr2_2:61944639-61944658 | None:intergenic | 5.0% |
| !!! | GTTTTCCCGGGTTTCGAGTT+TGG | - | chr2_2:61938997-61939016 | Msa0262930:CDS | 50.0% |
| GAAGAAGCGACTTGAAGGTC+AGG | - | chr2_2:61939762-61939781 | Msa0262930:intron | 50.0% | |
| GCGACTTGAAGGTCAGGTTA+AGG | - | chr2_2:61939768-61939787 | Msa0262930:intron | 50.0% | |
| GAAGCAATGTGAAGGATGGC+TGG | - | chr2_2:61939807-61939826 | Msa0262930:intron | 50.0% | |
| TGAAGGCCAAATCAAGGAGC+TGG | - | chr2_2:61940068-61940087 | Msa0262930:intron | 50.0% | |
| TGAGAAGCAACATGAAGGCC+GGG | - | chr2_2:61940182-61940201 | Msa0262930:intron | 50.0% | |
| TTGCTTCATGCTCCATCACC+CGG | + | chr2_2:61940203-61940222 | None:intergenic | 50.0% | |
| !! | GGTGATGGAGCATGAAGCAA+AGG | - | chr2_2:61940203-61940222 | Msa0262930:intron | 50.0% |
| ACCCACTACTACCTGGGAAA+GGG | + | chr2_2:61941109-61941128 | None:intergenic | 50.0% | |
| AACCCACTACTACCTGGGAA+AGG | + | chr2_2:61941110-61941129 | None:intergenic | 50.0% | |
| TGAAATGGGGGGTTTAGGAG+GGG | - | chr2_2:61941592-61941611 | Msa0262930:intron | 50.0% | |
| CCCTTTATGCAGGACTGAGA+AGG | - | chr2_2:61942526-61942545 | Msa0262930:intron | 50.0% | |
| AAGACCAAAGTGGTTGACGG+AGG | - | chr2_2:61943327-61943346 | Msa0262930:intron | 50.0% | |
| TCTTCCTCCGTCAACCACTT+TGG | + | chr2_2:61943334-61943353 | None:intergenic | 50.0% | |
| GGTTGACGGAGGAAGAGTTA+AGG | - | chr2_2:61943338-61943357 | Msa0262930:intron | 50.0% | |
| AGGGTCTTTAACCAGTGCTC+CGG | - | chr2_2:61943663-61943682 | Msa0262930:intron | 50.0% | |
| AGTTTCCTTAACCAGTGCCC+CGG | + | chr2_2:61943685-61943704 | None:intergenic | 50.0% | |
| GATTCCTTAACCAGTGTCCC+GGG | - | chr2_2:61943793-61943812 | Msa0262930:intron | 50.0% | |
| ATTCCTTAACCAGTGTCCCG+GGG | - | chr2_2:61943794-61943813 | Msa0262930:intron | 50.0% | |
| TAACGGCTCACTGAATTGGG+TGG | - | chr2_2:61943897-61943916 | Msa0262930:intron | 50.0% | |
| AACGGCTCACTGAATTGGGT+GGG | - | chr2_2:61943898-61943917 | Msa0262930:intron | 50.0% | |
| GGGGTTAGACCTAAGGGATA+AGG | + | chr2_2:61944333-61944352 | None:intergenic | 50.0% | |
| ACCTTCCGGTCTCAAGACAA+TGG | + | chr2_2:61944492-61944511 | None:intergenic | 50.0% | |
| CGAAGCTCGCAAGAAAATCC+AGG | - | chr2_2:61945417-61945436 | Msa0262930:CDS | 50.0% | |
| CTCGAAACCCGGGAAAACCT+TGG | + | chr2_2:61938995-61939014 | None:intergenic | 55.0% | |
| GGACCGTGAAAGGAAGGAAG+AGG | - | chr2_2:61939549-61939568 | Msa0262930:intron | 55.0% | |
| GCAATGTGAAGGATGGCTGG+AGG | - | chr2_2:61939810-61939829 | Msa0262930:intron | 55.0% | |
| GCTGGAGGACCTTGAGTCAA+AGG | - | chr2_2:61939825-61939844 | Msa0262930:intron | 55.0% | |
| GCTAGTTGAACGACGGGCAA+TGG | - | chr2_2:61939978-61939997 | Msa0262930:intron | 55.0% | |
| GCAACTTGAAGGTCGGGAGA+AGG | - | chr2_2:61940020-61940039 | Msa0262930:intron | 55.0% | |
| TCCCCTTTCCCAGGTAGTAG+TGG | - | chr2_2:61941104-61941123 | Msa0262930:intron | 55.0% | |
| CCCACTACTACCTGGGAAAG+GGG | + | chr2_2:61941108-61941127 | None:intergenic | 55.0% | |
| CCCCTTTCCCAGGTAGTAGT+GGG | - | chr2_2:61941105-61941124 | Msa0262930:intron | 55.0% | |
| GGGTCTTTAACCAGTGCTCC+GGG | - | chr2_2:61943664-61943683 | Msa0262930:intron | 55.0% | |
| GGTCTTTAACCAGTGCTCCG+GGG | - | chr2_2:61943665-61943684 | Msa0262930:intron | 55.0% | |
| GGGCCTCAACCAAATCTCGT+AGG | - | chr2_2:61943918-61943937 | Msa0262930:intron | 55.0% | |
| GGGGTTGGGGTTAGACCTAA+GGG | + | chr2_2:61944339-61944358 | None:intergenic | 55.0% | |
| GCCATTGTCTTGAGACCGGA+AGG | - | chr2_2:61944488-61944507 | Msa0262930:intron | 55.0% | |
| GTCTTGAGACCGGAAGGTCA+CGG | - | chr2_2:61944494-61944513 | Msa0262930:intron | 55.0% | |
| TCTTGAGACCGGAAGGTCAC+GGG | - | chr2_2:61944495-61944514 | Msa0262930:intron | 55.0% | |
| GACTTGAACCCGTGACCTTC+CGG | + | chr2_2:61944506-61944525 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr2_2:61944507-61944526 | Msa0262930:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+AGG | + | chr2_2:61944604-61944623 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr2_2:61944609-61944628 | Msa0262930:CDS | 55.0% |
| AGAGCGCAAGCTAGAGCTCG+AGG | - | chr2_2:61939444-61939463 | Msa0262930:intron | 60.0% | |
| GCAACATGAAGGCCGGGTGA+TGG | - | chr2_2:61940188-61940207 | Msa0262930:intron | 60.0% | |
| AATGGGGGGTTTAGGAGGGG+AGG | - | chr2_2:61941595-61941614 | Msa0262930:intron | 60.0% | |
| ATGGGGGGTTTAGGAGGGGA+GGG | - | chr2_2:61941596-61941615 | Msa0262930:intron | 60.0% | |
| TAACTAGTGCCCCGGGACAC+TGG | + | chr2_2:61943806-61943825 | None:intergenic | 60.0% | |
| GGGGGTTGGGGTTAGACCTA+AGG | + | chr2_2:61944340-61944359 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr2_2:61944577-61944596 | Msa0262930:CDS | 60.0% |
| CATACGCAAGGTCCGGGAAG+GGG | + | chr2_2:61944592-61944611 | None:intergenic | 60.0% | |
| GCATACGCAAGGTCCGGGAA+GGG | + | chr2_2:61944593-61944612 | None:intergenic | 60.0% | |
| CTTCCCGGACCTTGCGTATG+CGG | - | chr2_2:61944592-61944611 | Msa0262930:CDS | 60.0% | |
| TTCCCGGACCTTGCGTATGC+GGG | - | chr2_2:61944593-61944612 | Msa0262930:CDS | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr2_2:61944610-61944629 | Msa0262930:CDS | 60.0% |
| CTGGCTGTGTCCCCTTTCCC+AGG | - | chr2_2:61941095-61941114 | Msa0262930:intron | 65.0% | |
| TAACCAGTGCTCCGGGGCAC+TGG | - | chr2_2:61943671-61943690 | Msa0262930:intron | 65.0% | |
| TAACCAGTGCCCCGGAGCAC+TGG | + | chr2_2:61943677-61943696 | None:intergenic | 65.0% | |
| !! | GTGCTCCGGGGCACTGGTTA+AGG | - | chr2_2:61943677-61943696 | Msa0262930:intron | 65.0% |
| ! | GTGCCCCGGGACACTGGTTA+AGG | + | chr2_2:61943800-61943819 | None:intergenic | 65.0% |
| CGCATACGCAAGGTCCGGGA+AGG | + | chr2_2:61944594-61944613 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAAGGTCC+GGG | + | chr2_2:61944598-61944617 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAAGGTC+CGG | + | chr2_2:61944599-61944618 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 61938884 | 61945567 | 61938884 | ID=Msa0262930;Name=Msa0262930 |
| chr2_2 | mRNA | 61938884 | 61945567 | 61938884 | ID=Msa0262930-mRNA-1;Parent=Msa0262930;Name=Msa0262930-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|0|0|6|0|548 |
| chr2_2 | exon | 61945352 | 61945567 | 61945352 | ID=Msa0262930-mRNA-1:exon:19091;Parent=Msa0262930-mRNA-1 |
| chr2_2 | exon | 61945088 | 61945336 | 61945088 | ID=Msa0262930-mRNA-1:exon:19090;Parent=Msa0262930-mRNA-1 |
| chr2_2 | exon | 61944806 | 61945042 | 61944806 | ID=Msa0262930-mRNA-1:exon:19089;Parent=Msa0262930-mRNA-1 |
| chr2_2 | exon | 61944505 | 61944742 | 61944505 | ID=Msa0262930-mRNA-1:exon:19088;Parent=Msa0262930-mRNA-1 |
| chr2_2 | exon | 61944227 | 61944420 | 61944227 | ID=Msa0262930-mRNA-1:exon:19087;Parent=Msa0262930-mRNA-1 |
| chr2_2 | exon | 61938884 | 61939396 | 61938884 | ID=Msa0262930-mRNA-1:exon:19086;Parent=Msa0262930-mRNA-1 |
| chr2_2 | CDS | 61945352 | 61945567 | 61945352 | ID=Msa0262930-mRNA-1:cds;Parent=Msa0262930-mRNA-1 |
| chr2_2 | CDS | 61945088 | 61945336 | 61945088 | ID=Msa0262930-mRNA-1:cds;Parent=Msa0262930-mRNA-1 |
| chr2_2 | CDS | 61944806 | 61945042 | 61944806 | ID=Msa0262930-mRNA-1:cds;Parent=Msa0262930-mRNA-1 |
| chr2_2 | CDS | 61944505 | 61944742 | 61944505 | ID=Msa0262930-mRNA-1:cds;Parent=Msa0262930-mRNA-1 |
| chr2_2 | CDS | 61944227 | 61944420 | 61944227 | ID=Msa0262930-mRNA-1:cds;Parent=Msa0262930-mRNA-1 |
| chr2_2 | CDS | 61938884 | 61939396 | 61938884 | ID=Msa0262930-mRNA-1:cds;Parent=Msa0262930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
