Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222050 | XP_013452663.1 | 100.000 | 168 | 0 | 0 | 6 | 173 | 1 | 168 | 3.85e-118 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222050 | sp|Q9LZD7|MED7B_ARATH | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.69e-88 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222050 | A0A072UB69 | 100.000 | 168 | 0 | 0 | 6 | 173 | 1 | 168 | 1.84e-118 | 341 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0222050 | TR | MED7 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222050 | Msa0222100 | 0.963321 | 6.088473e-122 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222050 | MtrunA17_Chr6g0478701 | 100.000 | 168 | 0 | 0 | 6 | 173 | 1 | 168 | 3.54e-122 | 341 |
| Msa0222050 | MtrunA17_Chr2g0326811 | 99.405 | 168 | 1 | 0 | 6 | 173 | 1 | 168 | 1.39e-121 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222050 | AT5G03500.6 | 77.515 | 169 | 38 | 0 | 5 | 173 | 10 | 178 | 1.97e-89 | 259 |
| Msa0222050 | AT5G03500.3 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222050 | AT5G03500.4 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222050 | AT5G03500.2 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222050 | AT5G03500.5 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222050 | AT5G03500.7 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222050 | AT5G03500.1 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222050 | AT5G03220.1 | 79.167 | 168 | 35 | 0 | 6 | 173 | 1 | 168 | 2.30e-84 | 246 |
Find 54 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGCACTAACCTCCTTTA+AGG | 0.155429 | 2_1:+71041691 | Msa0222050:three_prime_UTR |
| AGCAACTTTGATTCACATTT+TGG | 0.169360 | 2_1:+71040369 | Msa0222050:CDS |
| AGAATTGCAACTACACATTT+TGG | 0.197843 | 2_1:+71040118 | Msa0222050:CDS |
| GTTATTTAGTGAAACCTTAA+AGG | 0.212541 | 2_1:-71041705 | None:intergenic |
| CACCACCACCACCTTATTAC+AGG | 0.297273 | 2_1:+71038132 | Msa0222050:CDS |
| AAGGAGCTGAGGTCACTTAA+TGG | 0.305351 | 2_1:+71040095 | Msa0222050:CDS |
| TGTCCTCCACAGCTTGTTTA+CGG | 0.307186 | 2_1:-71040408 | None:intergenic |
| TAAGATAGCCTACCAATATT+AGG | 0.320366 | 2_1:-71039772 | None:intergenic |
| GGTGCTTAATTTAAAATTAG+AGG | 0.323185 | 2_1:-71041738 | None:intergenic |
| GAAGGAACTTATATCTGTTT+CGG | 0.341977 | 2_1:+71038212 | Msa0222050:CDS |
| TCAATTGGTGGTGGAGGCTC+TGG | 0.354209 | 2_1:-71038191 | None:intergenic |
| CAGATATAAGTTCCTTCAAT+TGG | 0.376411 | 2_1:-71038206 | None:intergenic |
| GAATTCACTGCGTCCTCATC+AGG | 0.378652 | 2_1:+71040232 | Msa0222050:CDS |
| GGAGGCTCTGGAGCAGACTC+AGG | 0.379890 | 2_1:-71038179 | None:intergenic |
| CATTAAAACATAGTTAGTTA+TGG | 0.391947 | 2_1:+71041631 | Msa0222050:exon |
| TCTTTGTAAAGCCTGTAATA+AGG | 0.393712 | 2_1:-71038143 | None:intergenic |
| AAGCTGTGGAGGACATAAAT+AGG | 0.396665 | 2_1:+71040416 | Msa0222050:CDS |
| AGACAATCATGACAACCTTA+AGG | 0.402119 | 2_1:+71041665 | Msa0222050:three_prime_UTR |
| GAGTCATTGGCAACACTTGA+TGG | 0.406036 | 2_1:+71041607 | Msa0222050:CDS |
| TATTCTAAAGGACCTAATAT+TGG | 0.416061 | 2_1:+71039760 | Msa0222050:CDS |
| ACTTATACAAATTTGAATCA+TGG | 0.424889 | 2_1:+71041820 | Msa0222050:three_prime_UTR |
| GACAATCATGACAACCTTAA+GGG | 0.429800 | 2_1:+71041666 | Msa0222050:three_prime_UTR |
| CTGTAATAAGGTGGTGGTGG+TGG | 0.437759 | 2_1:-71038131 | None:intergenic |
| ACCCCTTGTTCTTCCAAGCT+TGG | 0.438251 | 2_1:-71039727 | None:intergenic |
| ATTAACAACAACTAACCATA+AGG | 0.461646 | 2_1:-71041759 | None:intergenic |
| GTGCTTAATTTAAAATTAGA+GGG | 0.462554 | 2_1:-71041737 | None:intergenic |
| GTGTTGCCAATGACTCGTTA+AGG | 0.463201 | 2_1:-71041600 | None:intergenic |
| AAGAATCCTTAACGAGTCAT+TGG | 0.477983 | 2_1:+71041594 | Msa0222050:CDS |
| TGTTGATTTGATGAAAAGGA+AGG | 0.504287 | 2_1:-71041850 | None:intergenic |
| GAGCCTCCACCACCAATTGA+AGG | 0.507691 | 2_1:+71038194 | Msa0222050:CDS |
| GTTCCTTCAATTGGTGGTGG+AGG | 0.512465 | 2_1:-71038197 | None:intergenic |
| TCTTTGTTGATTTGATGAAA+AGG | 0.512609 | 2_1:-71041854 | None:intergenic |
| TAGGTCCTTTAGAATAGAGT+TGG | 0.518443 | 2_1:-71039753 | None:intergenic |
| ACTCTCCTTGCATATTGTGA+TGG | 0.520397 | 2_1:-71040167 | None:intergenic |
| TAAGTTCCTTCAATTGGTGG+TGG | 0.528553 | 2_1:-71038200 | None:intergenic |
| TAGTGATGTTCTACCAAGCT+TGG | 0.528638 | 2_1:+71039714 | Msa0222050:CDS |
| CTACCAAGCTTGGAAGAACA+AGG | 0.531498 | 2_1:+71039724 | Msa0222050:CDS |
| GAGGACGCAGTGAATTCAAA+AGG | 0.536683 | 2_1:-71040226 | None:intergenic |
| GTACGCCAACTCTATTCTAA+AGG | 0.542516 | 2_1:+71039748 | Msa0222050:CDS |
| TGTAATAAGGTGGTGGTGGT+GGG | 0.546044 | 2_1:-71038130 | None:intergenic |
| ATATAAGTTCCTTCAATTGG+TGG | 0.550214 | 2_1:-71038203 | None:intergenic |
| GAGGCTCTGGAGCAGACTCA+GGG | 0.562875 | 2_1:-71038178 | None:intergenic |
| AGCCTGTAATAAGGTGGTGG+TGG | 0.598331 | 2_1:-71038134 | None:intergenic |
| ATTTAGTGAAACCTTAAAGG+AGG | 0.601516 | 2_1:-71041702 | None:intergenic |
| TAGATTTCAAGAAGGAGCTG+AGG | 0.608725 | 2_1:+71040084 | Msa0222050:intron |
| AGAGCGCCGTAAACAAGCTG+TGG | 0.612592 | 2_1:+71040402 | Msa0222050:CDS |
| ACCAAGCTTGGAAGAACAAG+GGG | 0.614422 | 2_1:+71039726 | Msa0222050:CDS |
| AGAGACCATCACAATATGCA+AGG | 0.622612 | 2_1:+71040162 | Msa0222050:CDS |
| GGAACTTATATCTGTTTCGG+AGG | 0.626605 | 2_1:+71038215 | Msa0222050:CDS |
| GCGCCGTAAACAAGCTGTGG+AGG | 0.632418 | 2_1:+71040405 | Msa0222050:CDS |
| GGAACATTGTATACCTGATG+AGG | 0.634197 | 2_1:-71040245 | None:intergenic |
| TTGTAAAGCCTGTAATAAGG+TGG | 0.646875 | 2_1:-71038140 | None:intergenic |
| TACCAAGCTTGGAAGAACAA+GGG | 0.654458 | 2_1:+71039725 | Msa0222050:CDS |
| TAAAGCCTGTAATAAGGTGG+TGG | 0.655388 | 2_1:-71038137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATATTAAAATTGCAA+GGG | - | chr2_1:71038265-71038284 | None:intergenic | 10.0% |
| !! | ATAATAATATTAAAATTGCA+AGG | - | chr2_1:71038266-71038285 | None:intergenic | 10.0% |
| !!! | TTGCAATTTTAATATTATTA+TGG | + | chr2_1:71038265-71038284 | Msa0222050:intron | 10.0% |
| !! | AAAAAATACAATCTATATAA+AGG | - | chr2_1:71040929-71040948 | None:intergenic | 10.0% |
| !!! | TGATTAGAAGATTTTATTTA+TGG | + | chr2_1:71038094-71038113 | Msa0222050:intron | 15.0% |
| !! | AATAATATTAAAATTGCAAG+GGG | - | chr2_1:71038264-71038283 | None:intergenic | 15.0% |
| !! | TTGAAAAATAAGTTCAAAAT+AGG | - | chr2_1:71038611-71038630 | None:intergenic | 15.0% |
| !! | AAGGAAAAAAATAATGATAT+GGG | - | chr2_1:71039219-71039238 | None:intergenic | 15.0% |
| !! | AAAGGAAAAAAATAATGATA+TGG | - | chr2_1:71039220-71039239 | None:intergenic | 15.0% |
| !! | ATGAAACAAATTTCAATAAA+GGG | - | chr2_1:71039333-71039352 | None:intergenic | 15.0% |
| !!! | AAAAAATAGTTCTTTTTATG+AGG | + | chr2_1:71039974-71039993 | Msa0222050:intron | 15.0% |
| !!! | ATTTTGTTTTTTAGTTTCAT+TGG | + | chr2_1:71040457-71040476 | Msa0222050:intron | 15.0% |
| !!! | TGCTATTCATATTTTAATTA+TGG | + | chr2_1:71040896-71040915 | Msa0222050:intron | 15.0% |
| !!! | ATTCATATTTTAATTATGGA+AGG | + | chr2_1:71040900-71040919 | Msa0222050:intron | 15.0% |
| !!! | TTATGGTTCTAATTACTATA+TGG | + | chr2_1:71038282-71038301 | Msa0222050:intron | 20.0% |
| !!! | GCTTTAATAATGTCATTTAA+TGG | + | chr2_1:71038420-71038439 | Msa0222050:intron | 20.0% |
| !!! | TTTTTACCTAATTTTAGCTT+TGG | + | chr2_1:71038457-71038476 | Msa0222050:intron | 20.0% |
| !!! | AAGCAAATAAAAGAACTTTT+GGG | - | chr2_1:71038530-71038549 | None:intergenic | 20.0% |
| !!! | AACTTATTTTTCAAAGTGTT+TGG | + | chr2_1:71038617-71038636 | Msa0222050:intron | 20.0% |
| !!! | ACTTATTTTTCAAAGTGTTT+GGG | + | chr2_1:71038618-71038637 | Msa0222050:intron | 20.0% |
| !!! | ATTAGCTTAAAATAGCTTTA+TGG | - | chr2_1:71038704-71038723 | None:intergenic | 20.0% |
| !!! | TATTTTAACAGCTTTTGAAA+GGG | - | chr2_1:71039010-71039029 | None:intergenic | 20.0% |
| !!! | ATATTTTAACAGCTTTTGAA+AGG | - | chr2_1:71039011-71039030 | None:intergenic | 20.0% |
| !! | AAAATATTGTCATCTAAACA+TGG | + | chr2_1:71039024-71039043 | Msa0222050:intron | 20.0% |
| !! | AAATATTGTCATCTAAACAT+GGG | + | chr2_1:71039025-71039044 | Msa0222050:intron | 20.0% |
| !! | TCAAAGGAAATATCTTTAAA+AGG | - | chr2_1:71039238-71039257 | None:intergenic | 20.0% |
| !! | CATGAAACAAATTTCAATAA+AGG | - | chr2_1:71039334-71039353 | None:intergenic | 20.0% |
| !! | ATTTGTTTCATGAGAATTAA+AGG | + | chr2_1:71039342-71039361 | Msa0222050:intron | 20.0% |
| !! | TTAAACTCTAAATTGATTGA+AGG | + | chr2_1:71039376-71039395 | Msa0222050:intron | 20.0% |
| !! | TAAACTCTAAATTGATTGAA+GGG | + | chr2_1:71039377-71039396 | Msa0222050:intron | 20.0% |
| !! | AGGAATGATATCATTAAATT+TGG | + | chr2_1:71039406-71039425 | Msa0222050:intron | 20.0% |
| !!! | AACACATAAACAGATATTTT+TGG | - | chr2_1:71039620-71039639 | None:intergenic | 20.0% |
| !! | GTATCATGTATTTACTTTAT+AGG | + | chr2_1:71040342-71040361 | Msa0222050:intron | 20.0% |
| !! | TGAAACTAAAAAACAAAATC+AGG | - | chr2_1:71040456-71040475 | None:intergenic | 20.0% |
| !!! | TTAGTTCATTCTTTTGAAAA+TGG | + | chr2_1:71040557-71040576 | Msa0222050:intron | 20.0% |
| !!! | TTCTCTTGTATTTCTATTTT+GGG | - | chr2_1:71040675-71040694 | None:intergenic | 20.0% |
| !! | AATGTAGTTAAAATTGATAG+TGG | + | chr2_1:71041164-71041183 | Msa0222050:intron | 20.0% |
| !! | GTATTTCATTAGAAAAAGTT+TGG | - | chr2_1:71041214-71041233 | None:intergenic | 20.0% |
| !!! | TAATTGTTTTATGATACGTA+TGG | + | chr2_1:71041495-71041514 | Msa0222050:intron | 20.0% |
| !!! | CATAACTAACTATGTTTTAA+TGG | - | chr2_1:71041633-71041652 | None:intergenic | 20.0% |
| !! | CATTAAAACATAGTTAGTTA+TGG | + | chr2_1:71041631-71041650 | Msa0222050:exon | 20.0% |
| !!! | GTGCTTAATTTAAAATTAGA+GGG | - | chr2_1:71041740-71041759 | None:intergenic | 20.0% |
| !!! | ATTTTAAATTAAGCACCTTA+TGG | + | chr2_1:71041744-71041763 | Msa0222050:three_prime_UTR | 20.0% |
| !!! | AAAACGATGTTTTTATGTTT+TGG | + | chr2_1:71041791-71041810 | Msa0222050:three_prime_UTR | 20.0% |
| !!! | AAACGATGTTTTTATGTTTT+GGG | + | chr2_1:71041792-71041811 | Msa0222050:three_prime_UTR | 20.0% |
| !! | ACTTATACAAATTTGAATCA+TGG | + | chr2_1:71041820-71041839 | Msa0222050:three_prime_UTR | 20.0% |
| !! | TCTCTGATCTTAATAGTTTT+AGG | + | chr2_1:71037582-71037601 | Msa0222050:intron | 25.0% |
| ! | AACAGATATGATATAACCAA+AGG | + | chr2_1:71037635-71037654 | Msa0222050:intron | 25.0% |
| !! | TTTTTCCTTACTAAACTCAT+TGG | - | chr2_1:71037745-71037764 | None:intergenic | 25.0% |
| !! | TATATTGCTTCCTAACTTTT+TGG | - | chr2_1:71037778-71037797 | None:intergenic | 25.0% |
| ! | CAGACATACTATCATATTTA+AGG | - | chr2_1:71037808-71037827 | None:intergenic | 25.0% |
| !! | GGGTTTACAAATCTAAAATT+AGG | + | chr2_1:71037843-71037862 | Msa0222050:intron | 25.0% |
| ! | ATCAATGCAAACAATGAAAT+TGG | + | chr2_1:71037880-71037899 | Msa0222050:intron | 25.0% |
| !!! | GAAGATTTTATTTATGGCAA+CGG | + | chr2_1:71038100-71038119 | Msa0222050:intron | 25.0% |
| !! | GAAGCAAATAAAAGAACTTT+TGG | - | chr2_1:71038531-71038550 | None:intergenic | 25.0% |
| !!! | CTATTTACTATCTTGTTGTT+TGG | + | chr2_1:71039050-71039069 | Msa0222050:intron | 25.0% |
| ! | CAATCACAACAACAAAAAAA+TGG | - | chr2_1:71039080-71039099 | None:intergenic | 25.0% |
| !!! | CATTTTTTTGTTGTTGTGAT+TGG | + | chr2_1:71039078-71039097 | Msa0222050:intron | 25.0% |
| !!! | TTTCCATTTTTGAAGTCTTT+GGG | - | chr2_1:71039119-71039138 | None:intergenic | 25.0% |
| !!! | TTTTCCATTTTTGAAGTCTT+TGG | - | chr2_1:71039120-71039139 | None:intergenic | 25.0% |
| ! | ATGTATTTGAGAAGTTTCAA+AGG | - | chr2_1:71039254-71039273 | None:intergenic | 25.0% |
| !! | AAATACATCTTCGATAGTTT+TGG | + | chr2_1:71039266-71039285 | Msa0222050:intron | 25.0% |
| ! | AATTTCAATAAAGGGTAGTT+TGG | - | chr2_1:71039325-71039344 | None:intergenic | 25.0% |
| ! | TCATGAGAATTAAAGGTTAT+TGG | + | chr2_1:71039349-71039368 | Msa0222050:intron | 25.0% |
| !! | GTTAAGATTTGCGTATATTT+TGG | + | chr2_1:71039436-71039455 | Msa0222050:intron | 25.0% |
| ! | TATAAACAGCAAAAAAATCC+AGG | - | chr2_1:71039471-71039490 | None:intergenic | 25.0% |
| !! | TATTCTAAAGGACCTAATAT+TGG | + | chr2_1:71039760-71039779 | Msa0222050:CDS | 25.0% |
| ! | ACATATTAGGTTACAATGTT+AGG | - | chr2_1:71039878-71039897 | None:intergenic | 25.0% |
| ! | TTAATAATGCCTAAAAGATC+AGG | - | chr2_1:71039926-71039945 | None:intergenic | 25.0% |
| ! | AAGGTAAGATGTTAACTATA+AGG | - | chr2_1:71040061-71040080 | None:intergenic | 25.0% |
| !! | ACCTTTTATAGATTTCAAGA+AGG | + | chr2_1:71040076-71040095 | Msa0222050:intron | 25.0% |
| ! | TCCTTCTTGAAATCTATAAA+AGG | - | chr2_1:71040080-71040099 | None:intergenic | 25.0% |
| ! | TTTATATACTTATAGCTGTC+TGG | - | chr2_1:71040269-71040288 | None:intergenic | 25.0% |
| ! | TATATAAACTTGCCTTGATT+TGG | + | chr2_1:71040281-71040300 | Msa0222050:intron | 25.0% |
| ! | TACAACGAAAATTTCAGAAA+CGG | - | chr2_1:71040325-71040344 | None:intergenic | 25.0% |
| !!! | TTTTTTAGTTTCATTGGCTA+TGG | + | chr2_1:71040463-71040482 | Msa0222050:intron | 25.0% |
| !!! | TTTTAAGTTGTAACCTTCAT+GGG | + | chr2_1:71040518-71040537 | Msa0222050:intron | 25.0% |
| !!! | CTTCTCTTGTATTTCTATTT+TGG | - | chr2_1:71040676-71040695 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGAATTAGGAT+AGG | - | chr2_1:71040762-71040781 | None:intergenic | 25.0% |
| ! | GACATGTAGAAATAAGAATT+AGG | - | chr2_1:71040767-71040786 | None:intergenic | 25.0% |
| !! | TAACTTATGTTCTAGCTATT+AGG | - | chr2_1:71040840-71040859 | None:intergenic | 25.0% |
| !! | ATTAGAAAAAGTTTGGTAAC+AGG | - | chr2_1:71041207-71041226 | None:intergenic | 25.0% |
| ! | GTTATTTAGTGAAACCTTAA+AGG | - | chr2_1:71041708-71041727 | None:intergenic | 25.0% |
| !! | GGTGCTTAATTTAAAATTAG+AGG | - | chr2_1:71041741-71041760 | None:intergenic | 25.0% |
| ! | ATTAACAACAACTAACCATA+AGG | - | chr2_1:71041762-71041781 | None:intergenic | 25.0% |
| !! | GAGATTTTAACACCTTCAAT+AGG | - | chr2_1:71037375-71037394 | None:intergenic | 30.0% |
| AATGATGCAGAGAAGAAATT+CGG | - | chr2_1:71037450-71037469 | None:intergenic | 30.0% | |
| ! | TTTTGACCTTGCTAAGTAAT+AGG | - | chr2_1:71037610-71037629 | None:intergenic | 30.0% |
| AATTGTGAAACTTCTACCTT+TGG | - | chr2_1:71037654-71037673 | None:intergenic | 30.0% | |
| AAGGTAGAAGTTTCACAATT+AGG | + | chr2_1:71037654-71037673 | Msa0222050:intron | 30.0% | |
| ! | CAACTTCAAACTACATTTTC+TGG | + | chr2_1:71037687-71037706 | Msa0222050:intron | 30.0% |
| AGATTCCAATGAGTTTAGTA+AGG | + | chr2_1:71037737-71037756 | Msa0222050:intron | 30.0% | |
| AGTTCACTAACCAAAAAGTT+AGG | + | chr2_1:71037765-71037784 | Msa0222050:intron | 30.0% | |
| GATACATCTATGATCTTTGA+AGG | + | chr2_1:71038067-71038086 | Msa0222050:intron | 30.0% | |
| TCTTTGTAAAGCCTGTAATA+AGG | - | chr2_1:71038146-71038165 | None:intergenic | 30.0% | |
| ATATAAGTTCCTTCAATTGG+TGG | - | chr2_1:71038206-71038225 | None:intergenic | 30.0% | |
| CAGATATAAGTTCCTTCAAT+TGG | - | chr2_1:71038209-71038228 | None:intergenic | 30.0% | |
| GAAGGAACTTATATCTGTTT+CGG | + | chr2_1:71038212-71038231 | Msa0222050:CDS | 30.0% | |
| ! | TGACACTTGAATAGACATTT+TGG | + | chr2_1:71038368-71038387 | Msa0222050:intron | 30.0% |
| !! | TTGAATAGACATTTTGGAAG+AGG | + | chr2_1:71038374-71038393 | Msa0222050:intron | 30.0% |
| !! | TATTTTTCAAAGTGTTTGGG+TGG | + | chr2_1:71038621-71038640 | Msa0222050:intron | 30.0% |
| ACCTTATGAAAACAGCTTAT+AGG | + | chr2_1:71038744-71038763 | Msa0222050:intron | 30.0% | |
| !! | TCCTATAAGCTGTTTTCATA+AGG | - | chr2_1:71038748-71038767 | None:intergenic | 30.0% |
| ATTGCAATTAAGCGTTTCTA+AGG | - | chr2_1:71038842-71038861 | None:intergenic | 30.0% | |
| AATTGCAATGCTTATCCAAA+CGG | + | chr2_1:71038853-71038872 | Msa0222050:intron | 30.0% | |
| CAACTCTAACTATTTGGTTA+AGG | + | chr2_1:71038981-71039000 | Msa0222050:intron | 30.0% | |
| !!! | TGGGATAATTTTGAGACTTT+GGG | - | chr2_1:71039200-71039219 | None:intergenic | 30.0% |
| !!! | ATGGGATAATTTTGAGACTT+TGG | - | chr2_1:71039201-71039220 | None:intergenic | 30.0% |
| !!! | AATTGATTGAAGGGCATTTT+AGG | + | chr2_1:71039386-71039405 | Msa0222050:intron | 30.0% |
| ! | ATTTTATGCAGAAGCCTATT+TGG | + | chr2_1:71039644-71039663 | Msa0222050:intron | 30.0% |
| TAAGATAGCCTACCAATATT+AGG | - | chr2_1:71039775-71039794 | None:intergenic | 30.0% | |
| ACTATCTGTAACAACTCATA+CGG | - | chr2_1:71039846-71039865 | None:intergenic | 30.0% | |
| TTTATGAGGAAATGCTGAAT+TGG | + | chr2_1:71039988-71040007 | Msa0222050:intron | 30.0% | |
| ! | AGAATTGCAACTACACATTT+TGG | + | chr2_1:71040118-71040137 | Msa0222050:CDS | 30.0% |
| ACAACGAAAATTTCAGAAAC+GGG | - | chr2_1:71040324-71040343 | None:intergenic | 30.0% | |
| ! | AGCAACTTTGATTCACATTT+TGG | + | chr2_1:71040369-71040388 | Msa0222050:CDS | 30.0% |
| AGAACCTTCTACAAATTTGT+TGG | + | chr2_1:71040490-71040509 | Msa0222050:intron | 30.0% | |
| CATACCAACAAATTTGTAGA+AGG | - | chr2_1:71040497-71040516 | None:intergenic | 30.0% | |
| !!! | CTTTTAAGTTGTAACCTTCA+TGG | + | chr2_1:71040517-71040536 | Msa0222050:intron | 30.0% |
| CAAAAGAATGAACTAACTTG+TGG | - | chr2_1:71040553-71040572 | None:intergenic | 30.0% | |
| AATCAGTTAAGGTTGTTTAC+TGG | - | chr2_1:71040628-71040647 | None:intergenic | 30.0% | |
| ! | TAAACAACCTTAACTGATTC+AGG | + | chr2_1:71040629-71040648 | Msa0222050:intron | 30.0% |
| ! | AAACAACCTTAACTGATTCA+GGG | + | chr2_1:71040630-71040649 | Msa0222050:intron | 30.0% |
| ATGTTCCAAGAGTTTACTAA+AGG | - | chr2_1:71040792-71040811 | None:intergenic | 30.0% | |
| ! | ACTCTTGGAACATTTTCATT+AGG | + | chr2_1:71040799-71040818 | Msa0222050:intron | 30.0% |
| CTTTCAATAAAACAAAACCC+TGG | - | chr2_1:71041026-71041045 | None:intergenic | 30.0% | |
| ! | AAGAGTTGATTATAACTCTC+TGG | + | chr2_1:71041043-71041062 | Msa0222050:intron | 30.0% |
| ! | AAAAAGTTTGGTAACAGGAT+TGG | - | chr2_1:71041202-71041221 | None:intergenic | 30.0% |
| ATGTTTGATGCTATGATTTC+TGG | - | chr2_1:71041256-71041275 | None:intergenic | 30.0% | |
| ! | CTTTTCCATAACTTGAAAGA+CGG | + | chr2_1:71041280-71041299 | Msa0222050:intron | 30.0% |
| AAAATGTACAAAGATACACC+AGG | - | chr2_1:71041308-71041327 | None:intergenic | 30.0% | |
| AAATGACTCTAATAGTGCTT+TGG | + | chr2_1:71041346-71041365 | Msa0222050:intron | 30.0% | |
| !! | CTTGATTGGTCTAATTTATG+AGG | + | chr2_1:71041372-71041391 | Msa0222050:intron | 30.0% |
| GTTAGTTCACCAAAATTGAT+AGG | + | chr2_1:71041402-71041421 | Msa0222050:intron | 30.0% | |
| !! | TAAAAGAGAAGCATTGTCTT+TGG | - | chr2_1:71041467-71041486 | None:intergenic | 30.0% |
| CTGAAAAGAAAAGAGAAAGT+AGG | - | chr2_1:71041556-71041575 | None:intergenic | 30.0% | |
| ! | CTACTTTCTCTTTTCTTTTC+AGG | + | chr2_1:71041554-71041573 | Msa0222050:intron | 30.0% |
| ATTTAGTGAAACCTTAAAGG+AGG | - | chr2_1:71041705-71041724 | None:intergenic | 30.0% | |
| TCAATAGGCAGAAGAAGATT+GGG | - | chr2_1:71037360-71037379 | None:intergenic | 35.0% | |
| TTCAATAGGCAGAAGAAGAT+TGG | - | chr2_1:71037361-71037380 | None:intergenic | 35.0% | |
| AATCTTCTTCTGCCTATTGA+AGG | + | chr2_1:71037360-71037379 | Msa0222050:intron | 35.0% | |
| ATGATGCAGAGAAGAAATTC+GGG | - | chr2_1:71037449-71037468 | None:intergenic | 35.0% | |
| ! | TTGGCTCGTCTTAAATCTAA+GGG | - | chr2_1:71037494-71037513 | None:intergenic | 35.0% |
| ! | TTAGATTTAAGACGAGCCAA+GGG | + | chr2_1:71037494-71037513 | Msa0222050:intron | 35.0% |
| TAGGATCCTATTACTTAGCA+AGG | + | chr2_1:71037601-71037620 | Msa0222050:intron | 35.0% | |
| TGTCTGTATATGCAATGAAG+TGG | + | chr2_1:71037822-71037841 | Msa0222050:intron | 35.0% | |
| GTCTGTATATGCAATGAAGT+GGG | + | chr2_1:71037823-71037842 | Msa0222050:intron | 35.0% | |
| !! | CATTGTTTGCATTGATGATG+AGG | - | chr2_1:71037876-71037895 | None:intergenic | 35.0% |
| ! | TGCAATTTTCGTTCCTGTTA+TGG | + | chr2_1:71037923-71037942 | Msa0222050:intron | 35.0% |
| GTTCCTGTTATGGTTAAGTT+GGG | + | chr2_1:71037933-71037952 | Msa0222050:intron | 35.0% | |
| TTGTAAAGCCTGTAATAAGG+TGG | - | chr2_1:71038143-71038162 | None:intergenic | 35.0% | |
| ! | CAAGTGTCATTGTAATAGCA+GGG | - | chr2_1:71038357-71038376 | None:intergenic | 35.0% |
| ! | TCAAGTGTCATTGTAATAGC+AGG | - | chr2_1:71038358-71038377 | None:intergenic | 35.0% |
| CACATGCCAAAGCTAAAATT+AGG | - | chr2_1:71038466-71038485 | None:intergenic | 35.0% | |
| ! | TGTGCGTTATTCTAAAAGCT+TGG | + | chr2_1:71038482-71038501 | Msa0222050:intron | 35.0% |
| ! | TCTAAAAGCTTGGAGCTTTT+TGG | + | chr2_1:71038492-71038511 | Msa0222050:intron | 35.0% |
| !! | TTAAGCGTTTCTAAGGCAAA+GGG | - | chr2_1:71038835-71038854 | None:intergenic | 35.0% |
| !! | ATTAAGCGTTTCTAAGGCAA+AGG | - | chr2_1:71038836-71038855 | None:intergenic | 35.0% |
| ATTGCAATGCTTATCCAAAC+GGG | + | chr2_1:71038854-71038873 | Msa0222050:intron | 35.0% | |
| AAGCCCAAAGACTTCAAAAA+TGG | + | chr2_1:71039113-71039132 | Msa0222050:intron | 35.0% | |
| TATCGGTATCAGATACATGT+TGG | - | chr2_1:71039152-71039171 | None:intergenic | 35.0% | |
| CGGTAGTATCAAATGTGTAT+CGG | - | chr2_1:71039169-71039188 | None:intergenic | 35.0% | |
| CGATACACATTTGATACTAC+CGG | + | chr2_1:71039167-71039186 | Msa0222050:intron | 35.0% | |
| !!! | TACATCTTCGATAGTTTTGG+TGG | + | chr2_1:71039269-71039288 | Msa0222050:intron | 35.0% |
| !!! | ACATCTTCGATAGTTTTGGT+GGG | + | chr2_1:71039270-71039289 | Msa0222050:intron | 35.0% |
| ACAGCAAAAAAATCCAGGTT+TGG | - | chr2_1:71039466-71039485 | None:intergenic | 35.0% | |
| ! | TGCTGTTTATATCTGTGATC+AGG | + | chr2_1:71039480-71039499 | Msa0222050:intron | 35.0% |
| TCAACCTTTCTCAAGGTTTA+TGG | - | chr2_1:71039549-71039568 | None:intergenic | 35.0% | |
| !! | TAGGTCCTTTAGAATAGAGT+TGG | - | chr2_1:71039756-71039775 | None:intergenic | 35.0% |
| CTAAAGGACCTAATATTGGT+AGG | + | chr2_1:71039764-71039783 | Msa0222050:intron | 35.0% | |
| GTTGTTACAGATAGTTGTGA+AGG | + | chr2_1:71039851-71039870 | Msa0222050:intron | 35.0% | |
| ACTATACACGGTCACATATT+AGG | - | chr2_1:71039891-71039910 | None:intergenic | 35.0% | |
| AGACTCTAATTTCTTCACAC+TGG | + | chr2_1:71040596-71040615 | Msa0222050:intron | 35.0% | |
| GACTCTAATTTCTTCACACT+GGG | + | chr2_1:71040597-71040616 | Msa0222050:intron | 35.0% | |
| TGAATTCCCTGAATCAGTTA+AGG | - | chr2_1:71040639-71040658 | None:intergenic | 35.0% | |
| TGCTAGTTAGTTGTTGTATC+TGG | - | chr2_1:71040735-71040754 | None:intergenic | 35.0% | |
| GTCTTCCTTTAGTAAACTCT+TGG | + | chr2_1:71040784-71040803 | Msa0222050:intron | 35.0% | |
| ! | TTATGTTCTAGCTATTAGGC+AGG | - | chr2_1:71040836-71040855 | None:intergenic | 35.0% |
| ! | CACTTTCCCATTTTAAACTG+CGG | + | chr2_1:71041109-71041128 | Msa0222050:intron | 35.0% |
| ! | TTCCATCCGCAGTTTAAAAT+GGG | - | chr2_1:71041118-71041137 | None:intergenic | 35.0% |
| !! | CGTCTTTCAAGTTATGGAAA+AGG | - | chr2_1:71041282-71041301 | None:intergenic | 35.0% |
| !! | TAGTGCTTTGGAAACTTGAT+TGG | + | chr2_1:71041358-71041377 | Msa0222050:intron | 35.0% |
| ! | ATGGTTGCTCCTATCAATTT+TGG | - | chr2_1:71041414-71041433 | None:intergenic | 35.0% |
| !! | CTTTCTCTTTTCTTTTCAGG+AGG | + | chr2_1:71041557-71041576 | Msa0222050:intron | 35.0% |
| AAGAATCCTTAACGAGTCAT+TGG | + | chr2_1:71041594-71041613 | Msa0222050:CDS | 35.0% | |
| AGACAATCATGACAACCTTA+AGG | + | chr2_1:71041665-71041684 | Msa0222050:three_prime_UTR | 35.0% | |
| GACAATCATGACAACCTTAA+GGG | + | chr2_1:71041666-71041685 | Msa0222050:three_prime_UTR | 35.0% | |
| ! | GTTAGTGCAATTTTCCCTTA+AGG | - | chr2_1:71041683-71041702 | None:intergenic | 35.0% |
| AATTGCACTAACCTCCTTTA+AGG | + | chr2_1:71041691-71041710 | Msa0222050:three_prime_UTR | 35.0% | |
| AATAGGCAGAAGAAGATTGG+GGG | - | chr2_1:71037358-71037377 | None:intergenic | 40.0% | |
| CAATAGGCAGAAGAAGATTG+GGG | - | chr2_1:71037359-71037378 | None:intergenic | 40.0% | |
| TGTTCAAGAATCACTGTGCA+TGG | - | chr2_1:71037401-71037420 | None:intergenic | 40.0% | |
| ! | CTTGGCTCGTCTTAAATCTA+AGG | - | chr2_1:71037495-71037514 | None:intergenic | 40.0% |
| ! | CTTAGATTTAAGACGAGCCA+AGG | + | chr2_1:71037493-71037512 | Msa0222050:intron | 40.0% |
| ! | TTTTGCTCTTGCAAATCCCT+TGG | - | chr2_1:71037513-71037532 | None:intergenic | 40.0% |
| CGTTCCTGTTATGGTTAAGT+TGG | + | chr2_1:71037932-71037951 | Msa0222050:intron | 40.0% | |
| AGACCCAACTTAACCATAAC+AGG | - | chr2_1:71037939-71037958 | None:intergenic | 40.0% | |
| ! | AATGAGACATGAAGAGTGCA+TGG | - | chr2_1:71038013-71038032 | None:intergenic | 40.0% |
| TAAAGCCTGTAATAAGGTGG+TGG | - | chr2_1:71038140-71038159 | None:intergenic | 40.0% | |
| TAAGTTCCTTCAATTGGTGG+TGG | - | chr2_1:71038203-71038222 | None:intergenic | 40.0% | |
| GGAACTTATATCTGTTTCGG+AGG | + | chr2_1:71038215-71038234 | Msa0222050:CDS | 40.0% | |
| AGTCGTGAAATCAACCTCAT+GGG | - | chr2_1:71038931-71038950 | None:intergenic | 40.0% | |
| TGGCAGCAACTCTAACTATT+TGG | + | chr2_1:71038975-71038994 | Msa0222050:intron | 40.0% | |
| ! | TTTGAAGTCTTTGGGCTTCA+TGG | - | chr2_1:71039111-71039130 | None:intergenic | 40.0% |
| CACATTTGATACTACCGGAT+AGG | + | chr2_1:71039172-71039191 | Msa0222050:intron | 40.0% | |
| !!! | CATCTTCGATAGTTTTGGTG+GGG | + | chr2_1:71039271-71039290 | Msa0222050:intron | 40.0% |
| !! | ATATTTTGGACCACCAAACC+TGG | + | chr2_1:71039450-71039469 | Msa0222050:intron | 40.0% |
| GCAAAAAAATCCAGGTTTGG+TGG | - | chr2_1:71039463-71039482 | None:intergenic | 40.0% | |
| !! | ATCAGGTTGAGTTCAGTCTA+GGG | + | chr2_1:71039497-71039516 | Msa0222050:intron | 40.0% |
| TCAAGGTTTATGGTTGGATG+AGG | - | chr2_1:71039539-71039558 | None:intergenic | 40.0% | |
| CCTTTCTCAAGGTTTATGGT+TGG | - | chr2_1:71039545-71039564 | None:intergenic | 40.0% | |
| CCAACCATAAACCTTGAGAA+AGG | + | chr2_1:71039542-71039561 | Msa0222050:intron | 40.0% | |
| ACTGAACTCAACCTTTCTCA+AGG | - | chr2_1:71039556-71039575 | None:intergenic | 40.0% | |
| TGAGTTCAGTCTTGCAAAAC+AGG | + | chr2_1:71039566-71039585 | Msa0222050:intron | 40.0% | |
| GAGTTCAGTCTTGCAAAACA+GGG | + | chr2_1:71039567-71039586 | Msa0222050:intron | 40.0% | |
| ACGATATGATCACGCCAAAT+AGG | - | chr2_1:71039661-71039680 | None:intergenic | 40.0% | |
| TAGTGATGTTCTACCAAGCT+TGG | + | chr2_1:71039714-71039733 | Msa0222050:CDS | 40.0% | |
| TACCAAGCTTGGAAGAACAA+GGG | + | chr2_1:71039725-71039744 | Msa0222050:CDS | 40.0% | |
| GTACGCCAACTCTATTCTAA+AGG | + | chr2_1:71039748-71039767 | Msa0222050:CDS | 40.0% | |
| TAGATTTCAAGAAGGAGCTG+AGG | + | chr2_1:71040084-71040103 | Msa0222050:intron | 40.0% | |
| AGAGACCATCACAATATGCA+AGG | + | chr2_1:71040162-71040181 | Msa0222050:CDS | 40.0% | |
| ACTCTCCTTGCATATTGTGA+TGG | - | chr2_1:71040170-71040189 | None:intergenic | 40.0% | |
| GGAACATTGTATACCTGATG+AGG | - | chr2_1:71040248-71040267 | None:intergenic | 40.0% | |
| AAGCTGTGGAGGACATAAAT+AGG | + | chr2_1:71040416-71040435 | Msa0222050:CDS | 40.0% | |
| GTGGATTTAGAAACCCATGA+AGG | - | chr2_1:71040534-71040553 | None:intergenic | 40.0% | |
| TGTATCTGGTGAGTCAGTTA+AGG | - | chr2_1:71040721-71040740 | None:intergenic | 40.0% | |
| ATGGGTGTATGAACCTATGA+GGG | - | chr2_1:71040994-71041013 | None:intergenic | 40.0% | |
| ! | TTCCCATTTTAAACTGCGGA+TGG | + | chr2_1:71041113-71041132 | Msa0222050:intron | 40.0% |
| CTTCCATCCGCAGTTTAAAA+TGG | - | chr2_1:71041119-71041138 | None:intergenic | 40.0% | |
| !! | AGGAACCGTCTTTCAAGTTA+TGG | - | chr2_1:71041288-71041307 | None:intergenic | 40.0% |
| ATAACTTGAAAGACGGTTCC+TGG | + | chr2_1:71041287-71041306 | Msa0222050:intron | 40.0% | |
| TGACAAAACTGGGCAAAGAA+GGG | - | chr2_1:71041441-71041460 | None:intergenic | 40.0% | |
| ATGACAAAACTGGGCAAAGA+AGG | - | chr2_1:71041442-71041461 | None:intergenic | 40.0% | |
| !! | TTCTTTGCCCAGTTTTGTCA+TGG | + | chr2_1:71041441-71041460 | Msa0222050:intron | 40.0% |
| TCTTTGGCCATGACAAAACT+GGG | - | chr2_1:71041451-71041470 | None:intergenic | 40.0% | |
| CAAGAATCACTGTGCATGGT+TGG | - | chr2_1:71037397-71037416 | None:intergenic | 45.0% | |
| AAATTCGGGAGGAGCTTACT+AGG | - | chr2_1:71037435-71037454 | None:intergenic | 45.0% | |
| ATGCAGAGAAGAAATTCGGG+AGG | - | chr2_1:71037446-71037465 | None:intergenic | 45.0% | |
| !! | TGTAATAAGGTGGTGGTGGT+GGG | - | chr2_1:71038133-71038152 | None:intergenic | 45.0% |
| CATGACAACTTTGCTGCGTT+TGG | + | chr2_1:71038569-71038588 | Msa0222050:intron | 45.0% | |
| GTTAGAGTAAGCTCCCATCA+TGG | + | chr2_1:71038883-71038902 | Msa0222050:intron | 45.0% | |
| TCCTTAAACCCTGCCATGAT+GGG | - | chr2_1:71038899-71038918 | None:intergenic | 45.0% | |
| TTCCTTAAACCCTGCCATGA+TGG | - | chr2_1:71038900-71038919 | None:intergenic | 45.0% | |
| TCATGGCAGGGTTTAAGGAA+TGG | + | chr2_1:71038900-71038919 | Msa0222050:intron | 45.0% | |
| AAGGAATGGTTAGACCCATG+AGG | + | chr2_1:71038914-71038933 | Msa0222050:intron | 45.0% | |
| GAGTCGTGAAATCAACCTCA+TGG | - | chr2_1:71038932-71038951 | None:intergenic | 45.0% | |
| ACTCAAATGAGTGACCTCCT+AGG | + | chr2_1:71038948-71038967 | Msa0222050:intron | 45.0% | |
| AAGTCTTTGGGCTTCATGGA+TGG | - | chr2_1:71039107-71039126 | None:intergenic | 45.0% | |
| TGAGACTTTGGGTACCTATC+CGG | - | chr2_1:71039189-71039208 | None:intergenic | 45.0% | |
| !! | GATCAGGTTGAGTTCAGTCT+AGG | + | chr2_1:71039496-71039515 | Msa0222050:intron | 45.0% |
| TTATGGTTGGATGAGGCACA+TGG | - | chr2_1:71039532-71039551 | None:intergenic | 45.0% | |
| CTACCAAGCTTGGAAGAACA+AGG | + | chr2_1:71039724-71039743 | Msa0222050:CDS | 45.0% | |
| ACCAAGCTTGGAAGAACAAG+GGG | + | chr2_1:71039726-71039745 | Msa0222050:CDS | 45.0% | |
| ACCGTGTATAGTCAGACTTG+TGG | + | chr2_1:71039899-71039918 | Msa0222050:intron | 45.0% | |
| CCCACAAGTCTGACTATACA+CGG | - | chr2_1:71039903-71039922 | None:intergenic | 45.0% | |
| CCGTGTATAGTCAGACTTGT+GGG | + | chr2_1:71039900-71039919 | Msa0222050:intron | 45.0% | |
| ! | ACTTGTGGGCCTGATCTTTT+AGG | + | chr2_1:71039914-71039933 | Msa0222050:intron | 45.0% |
| CTAGTAGAGACACCATGCAT+TGG | - | chr2_1:71040025-71040044 | None:intergenic | 45.0% | |
| AAGGAGCTGAGGTCACTTAA+TGG | + | chr2_1:71040095-71040114 | Msa0222050:CDS | 45.0% | |
| GAGGACGCAGTGAATTCAAA+AGG | - | chr2_1:71040229-71040248 | None:intergenic | 45.0% | |
| !! | TGCCTTGATTTGGATGCTTC+TGG | + | chr2_1:71040291-71040310 | Msa0222050:intron | 45.0% |
| !! | GACCAGAAGCATCCAAATCA+AGG | - | chr2_1:71040296-71040315 | None:intergenic | 45.0% |
| ! | TGTCCTCCACAGCTTGTTTA+CGG | - | chr2_1:71040411-71040430 | None:intergenic | 45.0% |
| GGTGAGTCAGTTAAGGTTGT+TGG | - | chr2_1:71040714-71040733 | None:intergenic | 45.0% | |
| TGCAAAACCCGACGAATCTA+AGG | + | chr2_1:71040959-71040978 | Msa0222050:intron | 45.0% | |
| CATGGGTGTATGAACCTATG+AGG | - | chr2_1:71040995-71041014 | None:intergenic | 45.0% | |
| CTCATAGGTTCATACACCCA+TGG | + | chr2_1:71040993-71041012 | Msa0222050:intron | 45.0% | |
| AAACCCTGGTAAGTAGCCAT+GGG | - | chr2_1:71041012-71041031 | None:intergenic | 45.0% | |
| AAAACCCTGGTAAGTAGCCA+TGG | - | chr2_1:71041013-71041032 | None:intergenic | 45.0% | |
| GTCTTTGGCCATGACAAAAC+TGG | - | chr2_1:71041452-71041471 | None:intergenic | 45.0% | |
| GTGTTGCCAATGACTCGTTA+AGG | - | chr2_1:71041603-71041622 | None:intergenic | 45.0% | |
| GAGTCATTGGCAACACTTGA+TGG | + | chr2_1:71041607-71041626 | Msa0222050:CDS | 45.0% | |
| !! | CTGTAATAAGGTGGTGGTGG+TGG | - | chr2_1:71038134-71038153 | None:intergenic | 50.0% |
| CACCACCACCACCTTATTAC+AGG | + | chr2_1:71038132-71038151 | Msa0222050:CDS | 50.0% | |
| ! | AGCCTGTAATAAGGTGGTGG+TGG | - | chr2_1:71038137-71038156 | None:intergenic | 50.0% |
| !! | GTTCCTTCAATTGGTGGTGG+AGG | - | chr2_1:71038200-71038219 | None:intergenic | 50.0% |
| AATGCTTATCCAAACGGGCC+TGG | + | chr2_1:71038859-71038878 | Msa0222050:intron | 50.0% | |
| TGGGAGCTTACTCTAACACC+AGG | - | chr2_1:71038880-71038899 | None:intergenic | 50.0% | |
| AGTAAGCTCCCATCATGGCA+GGG | + | chr2_1:71038888-71038907 | Msa0222050:intron | 50.0% | |
| TCCCATCATGGCAGGGTTTA+AGG | + | chr2_1:71038895-71038914 | Msa0222050:intron | 50.0% | |
| TGAGTGACCTCCTAGGCATA+TGG | + | chr2_1:71038955-71038974 | Msa0222050:intron | 50.0% | |
| AGAGTTGCTGCCATATGCCT+AGG | - | chr2_1:71038968-71038987 | None:intergenic | 50.0% | |
| !!! | CGATAGTTTTGGTGGGGACA+AGG | + | chr2_1:71039277-71039296 | Msa0222050:intron | 50.0% |
| !! | GTTTTGGTGGGGACAAGGAT+TGG | + | chr2_1:71039282-71039301 | Msa0222050:intron | 50.0% |
| ACCCCTTGTTCTTCCAAGCT+TGG | - | chr2_1:71039730-71039749 | None:intergenic | 50.0% | |
| !! | GTCACAAAAGCGCCAATGCA+TGG | + | chr2_1:71040010-71040029 | Msa0222050:intron | 50.0% |
| GAATTCACTGCGTCCTCATC+AGG | + | chr2_1:71040232-71040251 | Msa0222050:CDS | 50.0% | |
| ! | AACCCGACGAATCTAAGGCT+TGG | + | chr2_1:71040964-71040983 | Msa0222050:intron | 50.0% |
| GACCAAGCCTTAGATTCGTC+GGG | - | chr2_1:71040969-71040988 | None:intergenic | 50.0% | |
| GGACCAAGCCTTAGATTCGT+CGG | - | chr2_1:71040970-71040989 | None:intergenic | 50.0% | |
| GGTGTATGAACCTATGAGGG+AGG | - | chr2_1:71040991-71041010 | None:intergenic | 50.0% | |
| TACACCCATGGCTACTTACC+AGG | + | chr2_1:71041005-71041024 | Msa0222050:intron | 50.0% | |
| ACACCCATGGCTACTTACCA+GGG | + | chr2_1:71041006-71041025 | Msa0222050:intron | 50.0% | |
| CTGGGCAAAGAAGGGAGAAA+TGG | - | chr2_1:71041433-71041452 | None:intergenic | 50.0% | |
| CGGGAGGAGCTTACTAGGTT+TGG | - | chr2_1:71037430-71037449 | None:intergenic | 55.0% | |
| !! | TCAATTGGTGGTGGAGGCTC+TGG | - | chr2_1:71038194-71038213 | None:intergenic | 55.0% |
| GAGCCTCCACCACCAATTGA+AGG | + | chr2_1:71038194-71038213 | Msa0222050:CDS | 55.0% | |
| ACTCTAACACCAGGCCCGTT+TGG | - | chr2_1:71038871-71038890 | None:intergenic | 55.0% | |
| GAGTAAGCTCCCATCATGGC+AGG | + | chr2_1:71038887-71038906 | Msa0222050:intron | 55.0% | |
| GTTGCTGCCATATGCCTAGG+AGG | - | chr2_1:71038965-71038984 | None:intergenic | 55.0% | |
| !! | AGAGCGCCGTAAACAAGCTG+TGG | + | chr2_1:71040402-71040421 | Msa0222050:CDS | 55.0% |
| ! | AAGGCTTGGTCCTCCCTCAT+AGG | + | chr2_1:71040978-71040997 | Msa0222050:intron | 55.0% |
| !! | GAGGCTCTGGAGCAGACTCA+GGG | - | chr2_1:71038181-71038200 | None:intergenic | 60.0% |
| GCGCCGTAAACAAGCTGTGG+AGG | + | chr2_1:71040405-71040424 | Msa0222050:CDS | 60.0% | |
| !! | GGAGGCTCTGGAGCAGACTC+AGG | - | chr2_1:71038182-71038201 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 71037331 | 71041871 | 71037331 | ID=Msa0222050;Name=Msa0222050 |
| chr2_1 | mRNA | 71037331 | 71041871 | 71037331 | ID=Msa0222050-mRNA-1;Parent=Msa0222050;Name=Msa0222050-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.8|0.66|1|0.8|0.66|6|235|173 |
| chr2_1 | exon | 71037331 | 71037336 | 71037331 | ID=Msa0222050-mRNA-1:exon:20373;Parent=Msa0222050-mRNA-1 |
| chr2_1 | exon | 71038104 | 71038247 | 71038104 | ID=Msa0222050-mRNA-1:exon:20374;Parent=Msa0222050-mRNA-1 |
| chr2_1 | exon | 71039712 | 71039781 | 71039712 | ID=Msa0222050-mRNA-1:exon:20375;Parent=Msa0222050-mRNA-1 |
| chr2_1 | exon | 71040087 | 71040253 | 71040087 | ID=Msa0222050-mRNA-1:exon:20376;Parent=Msa0222050-mRNA-1 |
| chr2_1 | exon | 71040364 | 71040437 | 71040364 | ID=Msa0222050-mRNA-1:exon:20377;Parent=Msa0222050-mRNA-1 |
| chr2_1 | exon | 71041576 | 71041871 | 71041576 | ID=Msa0222050-mRNA-1:exon:20378;Parent=Msa0222050-mRNA-1 |
| chr2_1 | CDS | 71037331 | 71037336 | 71037331 | ID=Msa0222050-mRNA-1:cds;Parent=Msa0222050-mRNA-1 |
| chr2_1 | CDS | 71038104 | 71038247 | 71038104 | ID=Msa0222050-mRNA-1:cds;Parent=Msa0222050-mRNA-1 |
| chr2_1 | CDS | 71039712 | 71039781 | 71039712 | ID=Msa0222050-mRNA-1:cds;Parent=Msa0222050-mRNA-1 |
| chr2_1 | CDS | 71040087 | 71040253 | 71040087 | ID=Msa0222050-mRNA-1:cds;Parent=Msa0222050-mRNA-1 |
| chr2_1 | CDS | 71040364 | 71040437 | 71040364 | ID=Msa0222050-mRNA-1:cds;Parent=Msa0222050-mRNA-1 |
| chr2_1 | CDS | 71041576 | 71041636 | 71041576 | ID=Msa0222050-mRNA-1:cds;Parent=Msa0222050-mRNA-1 |
| chr2_1 | three_prime_UTR | 71041637 | 71041871 | 71041637 | ID=Msa0222050-mRNA-1:three_prime_utr;Parent=Msa0222050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
