Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222100 | XP_013452663.1 | 100.000 | 168 | 0 | 0 | 6 | 173 | 1 | 168 | 3.85e-118 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222100 | sp|Q9LZD7|MED7B_ARATH | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.69e-88 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222100 | A0A072UB69 | 100.000 | 168 | 0 | 0 | 6 | 173 | 1 | 168 | 1.84e-118 | 341 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0222100 | TR | MED7 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0222050 | Msa0222100 | 0.963321 | 6.088473e-122 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222100 | MtrunA17_Chr6g0478701 | 100.000 | 168 | 0 | 0 | 6 | 173 | 1 | 168 | 3.54e-122 | 341 |
| Msa0222100 | MtrunA17_Chr2g0326811 | 99.405 | 168 | 1 | 0 | 6 | 173 | 1 | 168 | 1.39e-121 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222100 | AT5G03500.6 | 77.515 | 169 | 38 | 0 | 5 | 173 | 10 | 178 | 1.97e-89 | 259 |
| Msa0222100 | AT5G03500.3 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222100 | AT5G03500.4 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222100 | AT5G03500.2 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222100 | AT5G03500.5 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222100 | AT5G03500.7 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222100 | AT5G03500.1 | 77.976 | 168 | 37 | 0 | 6 | 173 | 1 | 168 | 2.73e-89 | 258 |
| Msa0222100 | AT5G03220.1 | 79.167 | 168 | 35 | 0 | 6 | 173 | 1 | 168 | 2.30e-84 | 246 |
Find 54 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGCACTAACCTCCTTTA+AGG | 0.155429 | 2_1:+71113520 | Msa0222100:three_prime_UTR |
| AGCAACTTTGATTCACATTT+TGG | 0.169360 | 2_1:+71112198 | Msa0222100:CDS |
| AGAATTGCAACTACACATTT+TGG | 0.197843 | 2_1:+71111947 | Msa0222100:CDS |
| GTTATTTAGTGAAACCTTAA+AGG | 0.212541 | 2_1:-71113534 | None:intergenic |
| CACCACCACCACCTTATTAC+AGG | 0.297273 | 2_1:+71109962 | Msa0222100:CDS |
| AAGGAGCTGAGGTCACTTAA+TGG | 0.305351 | 2_1:+71111924 | Msa0222100:CDS |
| TGTCCTCCACAGCTTGTTTA+CGG | 0.307186 | 2_1:-71112237 | None:intergenic |
| TAAGATAGCCTACCAATATT+AGG | 0.320366 | 2_1:-71111600 | None:intergenic |
| GGTGCTTAATTTAAAATTAG+AGG | 0.323185 | 2_1:-71113567 | None:intergenic |
| GAAGGAACTTATATCTGTTT+CGG | 0.341977 | 2_1:+71110042 | Msa0222100:CDS |
| TCAATTGGTGGTGGAGGCTC+TGG | 0.354209 | 2_1:-71110021 | None:intergenic |
| CAGATATAAGTTCCTTCAAT+TGG | 0.376411 | 2_1:-71110036 | None:intergenic |
| GAATTCACTGCGTCCTCATC+AGG | 0.378652 | 2_1:+71112061 | Msa0222100:CDS |
| GGAGGCTCTGGAGCAGACTC+AGG | 0.379890 | 2_1:-71110009 | None:intergenic |
| CATTAAAACATAGTTAGTTA+TGG | 0.391947 | 2_1:+71113460 | Msa0222100:exon |
| TCTTTGTAAAGCCTGTAATA+AGG | 0.393712 | 2_1:-71109973 | None:intergenic |
| AAGCTGTGGAGGACATAAAT+AGG | 0.396665 | 2_1:+71112245 | Msa0222100:CDS |
| AGACAATCATGACAACCTTA+AGG | 0.402119 | 2_1:+71113494 | Msa0222100:three_prime_UTR |
| GAGTCATTGGCAACACTTGA+TGG | 0.406036 | 2_1:+71113436 | Msa0222100:CDS |
| TATTCTAAAGGACCTAATAT+TGG | 0.416061 | 2_1:+71111588 | Msa0222100:CDS |
| ACTTATACAAATTTGAATCA+TGG | 0.424889 | 2_1:+71113649 | Msa0222100:three_prime_UTR |
| GACAATCATGACAACCTTAA+GGG | 0.429800 | 2_1:+71113495 | Msa0222100:three_prime_UTR |
| CTGTAATAAGGTGGTGGTGG+TGG | 0.437759 | 2_1:-71109961 | None:intergenic |
| ACCCCTTGTTCTTCCAAGCT+TGG | 0.438251 | 2_1:-71111555 | None:intergenic |
| ATTAACAACAACTAACCATA+AGG | 0.461646 | 2_1:-71113588 | None:intergenic |
| GTGCTTAATTTAAAATTAGA+GGG | 0.462554 | 2_1:-71113566 | None:intergenic |
| GTGTTGCCAATGACTCGTTA+AGG | 0.463201 | 2_1:-71113429 | None:intergenic |
| AAGAATCCTTAACGAGTCAT+TGG | 0.477983 | 2_1:+71113423 | Msa0222100:CDS |
| TGTTGATTTGATGAAAAGGA+AGG | 0.504287 | 2_1:-71113679 | None:intergenic |
| GAGCCTCCACCACCAATTGA+AGG | 0.507691 | 2_1:+71110024 | Msa0222100:CDS |
| GTTCCTTCAATTGGTGGTGG+AGG | 0.512465 | 2_1:-71110027 | None:intergenic |
| TCTTTGTTGATTTGATGAAA+AGG | 0.512609 | 2_1:-71113683 | None:intergenic |
| TAGGTCCTTTAGAATAGAGT+TGG | 0.518443 | 2_1:-71111581 | None:intergenic |
| ACTCTCCTTGCATATTGTGA+TGG | 0.520397 | 2_1:-71111996 | None:intergenic |
| TAAGTTCCTTCAATTGGTGG+TGG | 0.528553 | 2_1:-71110030 | None:intergenic |
| TAGTGATGTTCTACCAAGCT+TGG | 0.528638 | 2_1:+71111542 | Msa0222100:CDS |
| CTACCAAGCTTGGAAGAACA+AGG | 0.531498 | 2_1:+71111552 | Msa0222100:CDS |
| GAGGACGCAGTGAATTCAAA+AGG | 0.536683 | 2_1:-71112055 | None:intergenic |
| GTACGCCAACTCTATTCTAA+AGG | 0.542516 | 2_1:+71111576 | Msa0222100:CDS |
| TGTAATAAGGTGGTGGTGGT+GGG | 0.546044 | 2_1:-71109960 | None:intergenic |
| ATATAAGTTCCTTCAATTGG+TGG | 0.550214 | 2_1:-71110033 | None:intergenic |
| GAGGCTCTGGAGCAGACTCA+GGG | 0.562875 | 2_1:-71110008 | None:intergenic |
| AGCCTGTAATAAGGTGGTGG+TGG | 0.598331 | 2_1:-71109964 | None:intergenic |
| ATTTAGTGAAACCTTAAAGG+AGG | 0.601516 | 2_1:-71113531 | None:intergenic |
| TAGATTTCAAGAAGGAGCTG+AGG | 0.608725 | 2_1:+71111913 | Msa0222100:intron |
| AGAGCGCCGTAAACAAGCTG+TGG | 0.612592 | 2_1:+71112231 | Msa0222100:CDS |
| ACCAAGCTTGGAAGAACAAG+GGG | 0.614422 | 2_1:+71111554 | Msa0222100:CDS |
| AGAGACCATCACAATATGCA+AGG | 0.622612 | 2_1:+71111991 | Msa0222100:CDS |
| GGAACTTATATCTGTTTCGG+AGG | 0.626605 | 2_1:+71110045 | Msa0222100:CDS |
| GCGCCGTAAACAAGCTGTGG+AGG | 0.632418 | 2_1:+71112234 | Msa0222100:CDS |
| GGAACATTGTATACCTGATG+AGG | 0.634197 | 2_1:-71112074 | None:intergenic |
| TTGTAAAGCCTGTAATAAGG+TGG | 0.646875 | 2_1:-71109970 | None:intergenic |
| TACCAAGCTTGGAAGAACAA+GGG | 0.654458 | 2_1:+71111553 | Msa0222100:CDS |
| TAAAGCCTGTAATAAGGTGG+TGG | 0.655388 | 2_1:-71109967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATATTAAAATTGCAA+GGG | - | chr2_1:71110095-71110114 | None:intergenic | 10.0% |
| !! | ATAATAATATTAAAATTGCA+AGG | - | chr2_1:71110096-71110115 | None:intergenic | 10.0% |
| !!! | TTGCAATTTTAATATTATTA+TGG | + | chr2_1:71110095-71110114 | Msa0222100:intron | 10.0% |
| !! | AAAAAATACAATCTATATAA+AGG | - | chr2_1:71112758-71112777 | None:intergenic | 10.0% |
| !!! | TGATTAGAAGATTTTATTTA+TGG | + | chr2_1:71109924-71109943 | Msa0222100:intron | 15.0% |
| !! | AATAATATTAAAATTGCAAG+GGG | - | chr2_1:71110094-71110113 | None:intergenic | 15.0% |
| !! | TTGAAAAATAAGTTCAAAAT+AGG | - | chr2_1:71110441-71110460 | None:intergenic | 15.0% |
| !! | AAGGAAAAAAATAATGATAT+GGG | - | chr2_1:71111047-71111066 | None:intergenic | 15.0% |
| !! | AAAGGAAAAAAATAATGATA+TGG | - | chr2_1:71111048-71111067 | None:intergenic | 15.0% |
| !! | ATGAAACAAATTTCAATAAA+GGG | - | chr2_1:71111161-71111180 | None:intergenic | 15.0% |
| !!! | AAAAAATAGTTCTTTTTATG+AGG | + | chr2_1:71111803-71111822 | Msa0222100:intron | 15.0% |
| !!! | ATTTTGTTTTTTAGTTTCAT+TGG | + | chr2_1:71112286-71112305 | Msa0222100:intron | 15.0% |
| !!! | TGCTATTCATATTTTAATTA+TGG | + | chr2_1:71112725-71112744 | Msa0222100:intron | 15.0% |
| !!! | ATTCATATTTTAATTATGGA+AGG | + | chr2_1:71112729-71112748 | Msa0222100:intron | 15.0% |
| !!! | TTATGGTTCTAATTACTATA+TGG | + | chr2_1:71110112-71110131 | Msa0222100:intron | 20.0% |
| !!! | GCTTTAATAATGTCATTTAA+TGG | + | chr2_1:71110250-71110269 | Msa0222100:intron | 20.0% |
| !!! | TTTTTACCTAATTTTAGCTT+TGG | + | chr2_1:71110287-71110306 | Msa0222100:intron | 20.0% |
| !!! | AAGCAAATAAAAGAACTTTT+GGG | - | chr2_1:71110360-71110379 | None:intergenic | 20.0% |
| !!! | AACTTATTTTTCAAAGTGTT+TGG | + | chr2_1:71110447-71110466 | Msa0222100:intron | 20.0% |
| !!! | ACTTATTTTTCAAAGTGTTT+GGG | + | chr2_1:71110448-71110467 | Msa0222100:intron | 20.0% |
| !!! | AATTAGCTTAAAATAGCTTA+TGG | - | chr2_1:71110533-71110552 | None:intergenic | 20.0% |
| !!! | TATTTTAACAGCTTTTGAAA+GGG | - | chr2_1:71110838-71110857 | None:intergenic | 20.0% |
| !!! | ATATTTTAACAGCTTTTGAA+AGG | - | chr2_1:71110839-71110858 | None:intergenic | 20.0% |
| !! | AAAATATTGTCATCTAAACA+TGG | + | chr2_1:71110852-71110871 | Msa0222100:intron | 20.0% |
| !! | AAATATTGTCATCTAAACAT+GGG | + | chr2_1:71110853-71110872 | Msa0222100:intron | 20.0% |
| !! | TCAAAGGAAATATCTTTAAA+AGG | - | chr2_1:71111066-71111085 | None:intergenic | 20.0% |
| !! | CATGAAACAAATTTCAATAA+AGG | - | chr2_1:71111162-71111181 | None:intergenic | 20.0% |
| !! | ATTTGTTTCATGAGAATTAA+AGG | + | chr2_1:71111170-71111189 | Msa0222100:intron | 20.0% |
| !! | TTAAACTCTAAATTGATTGA+AGG | + | chr2_1:71111204-71111223 | Msa0222100:intron | 20.0% |
| !! | TAAACTCTAAATTGATTGAA+GGG | + | chr2_1:71111205-71111224 | Msa0222100:intron | 20.0% |
| !! | AGGAATGATATCATTAAATT+TGG | + | chr2_1:71111234-71111253 | Msa0222100:intron | 20.0% |
| !!! | AACACATAAACAGATATTTT+TGG | - | chr2_1:71111448-71111467 | None:intergenic | 20.0% |
| !! | GTATCATGTATTTACTTTAT+AGG | + | chr2_1:71112171-71112190 | Msa0222100:intron | 20.0% |
| !! | TGAAACTAAAAAACAAAATC+AGG | - | chr2_1:71112285-71112304 | None:intergenic | 20.0% |
| !!! | TTAGTTCATTCTTTTGAAAA+TGG | + | chr2_1:71112386-71112405 | Msa0222100:intron | 20.0% |
| !!! | TTCTCTTGTATTTCTATTTT+GGG | - | chr2_1:71112504-71112523 | None:intergenic | 20.0% |
| !! | AATGTAGTTAAAATTGATAG+TGG | + | chr2_1:71112993-71113012 | Msa0222100:intron | 20.0% |
| !! | GTATTTCATTAGAAAAAGTT+TGG | - | chr2_1:71113043-71113062 | None:intergenic | 20.0% |
| !!! | TAATTGTTTTATGATACGTA+TGG | + | chr2_1:71113324-71113343 | Msa0222100:intron | 20.0% |
| !!! | CATAACTAACTATGTTTTAA+TGG | - | chr2_1:71113462-71113481 | None:intergenic | 20.0% |
| !! | CATTAAAACATAGTTAGTTA+TGG | + | chr2_1:71113460-71113479 | Msa0222100:exon | 20.0% |
| !!! | GTGCTTAATTTAAAATTAGA+GGG | - | chr2_1:71113569-71113588 | None:intergenic | 20.0% |
| !!! | ATTTTAAATTAAGCACCTTA+TGG | + | chr2_1:71113573-71113592 | Msa0222100:three_prime_UTR | 20.0% |
| !!! | AAAACGATGTTTTTATGTTT+TGG | + | chr2_1:71113620-71113639 | Msa0222100:three_prime_UTR | 20.0% |
| !!! | AAACGATGTTTTTATGTTTT+GGG | + | chr2_1:71113621-71113640 | Msa0222100:three_prime_UTR | 20.0% |
| !! | ACTTATACAAATTTGAATCA+TGG | + | chr2_1:71113649-71113668 | Msa0222100:three_prime_UTR | 20.0% |
| !! | TCTCTGATCTTAATAGTTTT+AGG | + | chr2_1:71109413-71109432 | Msa0222100:intron | 25.0% |
| ! | AACAGATATGATATAACCAA+AGG | + | chr2_1:71109466-71109485 | Msa0222100:intron | 25.0% |
| !! | TTTTTCCTTACTAAACTCAT+TGG | - | chr2_1:71109576-71109595 | None:intergenic | 25.0% |
| !! | TATATTGCTTCCTAACTTTT+TGG | - | chr2_1:71109609-71109628 | None:intergenic | 25.0% |
| ! | CAGACATACTATCATATTTA+AGG | - | chr2_1:71109639-71109658 | None:intergenic | 25.0% |
| !! | GGGTTTACAAATCTAAAATT+AGG | + | chr2_1:71109674-71109693 | Msa0222100:intron | 25.0% |
| ! | ATCAATGCAAACAATGAAAT+TGG | + | chr2_1:71109711-71109730 | Msa0222100:intron | 25.0% |
| !!! | GAAGATTTTATTTATGGCAA+CGG | + | chr2_1:71109930-71109949 | Msa0222100:intron | 25.0% |
| !! | GAAGCAAATAAAAGAACTTT+TGG | - | chr2_1:71110361-71110380 | None:intergenic | 25.0% |
| !!! | CTATTTACTATCTTGTTGTT+TGG | + | chr2_1:71110878-71110897 | Msa0222100:intron | 25.0% |
| ! | CAATCACAACAACAAAAAAA+TGG | - | chr2_1:71110908-71110927 | None:intergenic | 25.0% |
| !!! | CATTTTTTTGTTGTTGTGAT+TGG | + | chr2_1:71110906-71110925 | Msa0222100:intron | 25.0% |
| !!! | TTTCCATTTTTGAAGTCTTT+GGG | - | chr2_1:71110947-71110966 | None:intergenic | 25.0% |
| !!! | TTTTCCATTTTTGAAGTCTT+TGG | - | chr2_1:71110948-71110967 | None:intergenic | 25.0% |
| ! | ATGTATTTGAGAAGTTTCAA+AGG | - | chr2_1:71111082-71111101 | None:intergenic | 25.0% |
| !! | AAATACATCTTCGATAGTTT+TGG | + | chr2_1:71111094-71111113 | Msa0222100:intron | 25.0% |
| ! | AATTTCAATAAAGGGTAGTT+TGG | - | chr2_1:71111153-71111172 | None:intergenic | 25.0% |
| ! | TCATGAGAATTAAAGGTTAT+TGG | + | chr2_1:71111177-71111196 | Msa0222100:intron | 25.0% |
| !! | GTTAAGATTTGCGTATATTT+TGG | + | chr2_1:71111264-71111283 | Msa0222100:intron | 25.0% |
| ! | TATAAACAGCAAAAAAATCC+AGG | - | chr2_1:71111299-71111318 | None:intergenic | 25.0% |
| !! | TATTCTAAAGGACCTAATAT+TGG | + | chr2_1:71111588-71111607 | Msa0222100:CDS | 25.0% |
| ! | ACATATTAGGTTACAATGTT+AGG | - | chr2_1:71111706-71111725 | None:intergenic | 25.0% |
| ! | TTAATAATGCCTAAAAGATC+AGG | - | chr2_1:71111755-71111774 | None:intergenic | 25.0% |
| ! | AAGGTAAGATGTTAACTATA+AGG | - | chr2_1:71111890-71111909 | None:intergenic | 25.0% |
| !! | ACCTTTTATAGATTTCAAGA+AGG | + | chr2_1:71111905-71111924 | Msa0222100:intron | 25.0% |
| ! | TCCTTCTTGAAATCTATAAA+AGG | - | chr2_1:71111909-71111928 | None:intergenic | 25.0% |
| ! | TTTATATACTTATAGCTGTC+TGG | - | chr2_1:71112098-71112117 | None:intergenic | 25.0% |
| ! | TATATAAACTTGCCTTGATT+TGG | + | chr2_1:71112110-71112129 | Msa0222100:intron | 25.0% |
| ! | TACAACGAAAATTTCAGAAA+CGG | - | chr2_1:71112154-71112173 | None:intergenic | 25.0% |
| !!! | TTTTTTAGTTTCATTGGCTA+TGG | + | chr2_1:71112292-71112311 | Msa0222100:intron | 25.0% |
| !!! | TTTTAAGTTGTAACCTTCAT+GGG | + | chr2_1:71112347-71112366 | Msa0222100:intron | 25.0% |
| !!! | CTTCTCTTGTATTTCTATTT+TGG | - | chr2_1:71112505-71112524 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGAATTAGGAT+AGG | - | chr2_1:71112591-71112610 | None:intergenic | 25.0% |
| ! | GACATGTAGAAATAAGAATT+AGG | - | chr2_1:71112596-71112615 | None:intergenic | 25.0% |
| !! | TAACTTATGTTCTAGCTATT+AGG | - | chr2_1:71112669-71112688 | None:intergenic | 25.0% |
| !! | ATTAGAAAAAGTTTGGTAAC+AGG | - | chr2_1:71113036-71113055 | None:intergenic | 25.0% |
| ! | GTTATTTAGTGAAACCTTAA+AGG | - | chr2_1:71113537-71113556 | None:intergenic | 25.0% |
| !! | GGTGCTTAATTTAAAATTAG+AGG | - | chr2_1:71113570-71113589 | None:intergenic | 25.0% |
| ! | ATTAACAACAACTAACCATA+AGG | - | chr2_1:71113591-71113610 | None:intergenic | 25.0% |
| !! | GAGATTTTAACACCTTCAAT+AGG | - | chr2_1:71109206-71109225 | None:intergenic | 30.0% |
| AATGATGCAGAGAAGAAATT+CGG | - | chr2_1:71109281-71109300 | None:intergenic | 30.0% | |
| ! | TTTTGACCTTGCTAAGTAAT+AGG | - | chr2_1:71109441-71109460 | None:intergenic | 30.0% |
| AATTGTGAAACTTCTACCTT+TGG | - | chr2_1:71109485-71109504 | None:intergenic | 30.0% | |
| AAGGTAGAAGTTTCACAATT+AGG | + | chr2_1:71109485-71109504 | Msa0222100:intron | 30.0% | |
| ! | CAACTTCAAACTACATTTTC+TGG | + | chr2_1:71109518-71109537 | Msa0222100:intron | 30.0% |
| AGATTCCAATGAGTTTAGTA+AGG | + | chr2_1:71109568-71109587 | Msa0222100:intron | 30.0% | |
| AGTTCACTAACCAAAAAGTT+AGG | + | chr2_1:71109596-71109615 | Msa0222100:intron | 30.0% | |
| GATACATCTATGATCTTTGA+AGG | + | chr2_1:71109897-71109916 | Msa0222100:intron | 30.0% | |
| TCTTTGTAAAGCCTGTAATA+AGG | - | chr2_1:71109976-71109995 | None:intergenic | 30.0% | |
| ATATAAGTTCCTTCAATTGG+TGG | - | chr2_1:71110036-71110055 | None:intergenic | 30.0% | |
| CAGATATAAGTTCCTTCAAT+TGG | - | chr2_1:71110039-71110058 | None:intergenic | 30.0% | |
| GAAGGAACTTATATCTGTTT+CGG | + | chr2_1:71110042-71110061 | Msa0222100:CDS | 30.0% | |
| ! | TGACACTTGAATAGACATTT+TGG | + | chr2_1:71110198-71110217 | Msa0222100:intron | 30.0% |
| !! | TTGAATAGACATTTTGGAAG+AGG | + | chr2_1:71110204-71110223 | Msa0222100:intron | 30.0% |
| !! | TATTTTTCAAAGTGTTTGGG+TGG | + | chr2_1:71110451-71110470 | Msa0222100:intron | 30.0% |
| ACCTTATGAAAACAGCTTAT+AGG | + | chr2_1:71110572-71110591 | Msa0222100:intron | 30.0% | |
| !! | TCCTATAAGCTGTTTTCATA+AGG | - | chr2_1:71110576-71110595 | None:intergenic | 30.0% |
| ATTGCAATTAAGCGTTTCTA+AGG | - | chr2_1:71110670-71110689 | None:intergenic | 30.0% | |
| AATTGCAATGCTTATCCAAA+CGG | + | chr2_1:71110681-71110700 | Msa0222100:intron | 30.0% | |
| CAACTCTAACTATTTGGTTA+AGG | + | chr2_1:71110809-71110828 | Msa0222100:intron | 30.0% | |
| !!! | TGGGATAATTTTGAGACTTT+GGG | - | chr2_1:71111028-71111047 | None:intergenic | 30.0% |
| !!! | ATGGGATAATTTTGAGACTT+TGG | - | chr2_1:71111029-71111048 | None:intergenic | 30.0% |
| !!! | AATTGATTGAAGGGCATTTT+AGG | + | chr2_1:71111214-71111233 | Msa0222100:intron | 30.0% |
| ! | ATTTTATGCAGAAGCCTATT+TGG | + | chr2_1:71111472-71111491 | Msa0222100:intron | 30.0% |
| TAAGATAGCCTACCAATATT+AGG | - | chr2_1:71111603-71111622 | None:intergenic | 30.0% | |
| ACTATCTGTAACAACTCATA+CGG | - | chr2_1:71111674-71111693 | None:intergenic | 30.0% | |
| TTTATGAGGAAATGCTGAAT+TGG | + | chr2_1:71111817-71111836 | Msa0222100:intron | 30.0% | |
| ! | AGAATTGCAACTACACATTT+TGG | + | chr2_1:71111947-71111966 | Msa0222100:CDS | 30.0% |
| ACAACGAAAATTTCAGAAAC+GGG | - | chr2_1:71112153-71112172 | None:intergenic | 30.0% | |
| ! | AGCAACTTTGATTCACATTT+TGG | + | chr2_1:71112198-71112217 | Msa0222100:CDS | 30.0% |
| AGAACCTTCTACAAATTTGT+TGG | + | chr2_1:71112319-71112338 | Msa0222100:intron | 30.0% | |
| CATACCAACAAATTTGTAGA+AGG | - | chr2_1:71112326-71112345 | None:intergenic | 30.0% | |
| !!! | CTTTTAAGTTGTAACCTTCA+TGG | + | chr2_1:71112346-71112365 | Msa0222100:intron | 30.0% |
| CAAAAGAATGAACTAACTTG+TGG | - | chr2_1:71112382-71112401 | None:intergenic | 30.0% | |
| AATCAGTTAAGGTTGTTTAC+TGG | - | chr2_1:71112457-71112476 | None:intergenic | 30.0% | |
| ! | TAAACAACCTTAACTGATTC+AGG | + | chr2_1:71112458-71112477 | Msa0222100:intron | 30.0% |
| ! | AAACAACCTTAACTGATTCA+GGG | + | chr2_1:71112459-71112478 | Msa0222100:intron | 30.0% |
| ATGTTCCAAGAGTTTACTAA+AGG | - | chr2_1:71112621-71112640 | None:intergenic | 30.0% | |
| ! | ACTCTTGGAACATTTTCATT+AGG | + | chr2_1:71112628-71112647 | Msa0222100:intron | 30.0% |
| CTTTCAATAAAACAAAACCC+TGG | - | chr2_1:71112855-71112874 | None:intergenic | 30.0% | |
| ! | AAGAGTTGATTATAACTCTC+TGG | + | chr2_1:71112872-71112891 | Msa0222100:intron | 30.0% |
| ! | AAAAAGTTTGGTAACAGGAT+TGG | - | chr2_1:71113031-71113050 | None:intergenic | 30.0% |
| ATGTTTGATGCTATGATTTC+TGG | - | chr2_1:71113085-71113104 | None:intergenic | 30.0% | |
| ! | CTTTTCCATAACTTGAAAGA+CGG | + | chr2_1:71113109-71113128 | Msa0222100:intron | 30.0% |
| AAAATGTACAAAGATACACC+AGG | - | chr2_1:71113137-71113156 | None:intergenic | 30.0% | |
| AAATGACTCTAATAGTGCTT+TGG | + | chr2_1:71113175-71113194 | Msa0222100:intron | 30.0% | |
| !! | CTTGATTGGTCTAATTTATG+AGG | + | chr2_1:71113201-71113220 | Msa0222100:intron | 30.0% |
| GTTAGTTCACCAAAATTGAT+AGG | + | chr2_1:71113231-71113250 | Msa0222100:intron | 30.0% | |
| !! | TAAAAGAGAAGCATTGTCTT+TGG | - | chr2_1:71113296-71113315 | None:intergenic | 30.0% |
| CTGAAAAGAAAAGAGAAAGT+AGG | - | chr2_1:71113385-71113404 | None:intergenic | 30.0% | |
| ! | CTACTTTCTCTTTTCTTTTC+AGG | + | chr2_1:71113383-71113402 | Msa0222100:intron | 30.0% |
| ATTTAGTGAAACCTTAAAGG+AGG | - | chr2_1:71113534-71113553 | None:intergenic | 30.0% | |
| TCAATAGGCAGAAGAAGATT+GGG | - | chr2_1:71109191-71109210 | None:intergenic | 35.0% | |
| TTCAATAGGCAGAAGAAGAT+TGG | - | chr2_1:71109192-71109211 | None:intergenic | 35.0% | |
| AATCTTCTTCTGCCTATTGA+AGG | + | chr2_1:71109191-71109210 | Msa0222100:intron | 35.0% | |
| ATGATGCAGAGAAGAAATTC+GGG | - | chr2_1:71109280-71109299 | None:intergenic | 35.0% | |
| ! | TTGGCTCGTCTTAAATCTAA+GGG | - | chr2_1:71109325-71109344 | None:intergenic | 35.0% |
| ! | TTAGATTTAAGACGAGCCAA+GGG | + | chr2_1:71109325-71109344 | Msa0222100:intron | 35.0% |
| TAGGATCCTATTACTTAGCA+AGG | + | chr2_1:71109432-71109451 | Msa0222100:intron | 35.0% | |
| TGTCTGTATATGCAATGAAG+TGG | + | chr2_1:71109653-71109672 | Msa0222100:intron | 35.0% | |
| GTCTGTATATGCAATGAAGT+GGG | + | chr2_1:71109654-71109673 | Msa0222100:intron | 35.0% | |
| !! | CATTGTTTGCATTGATGATG+AGG | - | chr2_1:71109707-71109726 | None:intergenic | 35.0% |
| ! | TGCAATTTTCGTTCCTGTTA+TGG | + | chr2_1:71109754-71109773 | Msa0222100:intron | 35.0% |
| GTTCCTGTTATGGTTAAGTT+GGG | + | chr2_1:71109764-71109783 | Msa0222100:intron | 35.0% | |
| TTGTAAAGCCTGTAATAAGG+TGG | - | chr2_1:71109973-71109992 | None:intergenic | 35.0% | |
| ! | CAAGTGTCATTGTAATAGCA+GGG | - | chr2_1:71110187-71110206 | None:intergenic | 35.0% |
| ! | TCAAGTGTCATTGTAATAGC+AGG | - | chr2_1:71110188-71110207 | None:intergenic | 35.0% |
| CACATGCCAAAGCTAAAATT+AGG | - | chr2_1:71110296-71110315 | None:intergenic | 35.0% | |
| ! | TGTGCGTTATTCTAAAAGCT+TGG | + | chr2_1:71110312-71110331 | Msa0222100:intron | 35.0% |
| ! | TCTAAAAGCTTGGAGCTTTT+TGG | + | chr2_1:71110322-71110341 | Msa0222100:intron | 35.0% |
| !! | TTAAGCGTTTCTAAGGCAAA+GGG | - | chr2_1:71110663-71110682 | None:intergenic | 35.0% |
| !! | ATTAAGCGTTTCTAAGGCAA+AGG | - | chr2_1:71110664-71110683 | None:intergenic | 35.0% |
| ATTGCAATGCTTATCCAAAC+GGG | + | chr2_1:71110682-71110701 | Msa0222100:intron | 35.0% | |
| AAGCCCAAAGACTTCAAAAA+TGG | + | chr2_1:71110941-71110960 | Msa0222100:intron | 35.0% | |
| TATCGGTATCAGATACATGT+TGG | - | chr2_1:71110980-71110999 | None:intergenic | 35.0% | |
| CGGTAGTATCAAATGTGTAT+CGG | - | chr2_1:71110997-71111016 | None:intergenic | 35.0% | |
| CGATACACATTTGATACTAC+CGG | + | chr2_1:71110995-71111014 | Msa0222100:intron | 35.0% | |
| !!! | TACATCTTCGATAGTTTTGG+TGG | + | chr2_1:71111097-71111116 | Msa0222100:intron | 35.0% |
| !!! | ACATCTTCGATAGTTTTGGT+GGG | + | chr2_1:71111098-71111117 | Msa0222100:intron | 35.0% |
| ACAGCAAAAAAATCCAGGTT+TGG | - | chr2_1:71111294-71111313 | None:intergenic | 35.0% | |
| ! | TGCTGTTTATATCTGTGATC+AGG | + | chr2_1:71111308-71111327 | Msa0222100:intron | 35.0% |
| TCAACCTTTCTCAAGGTTTA+TGG | - | chr2_1:71111377-71111396 | None:intergenic | 35.0% | |
| !! | TAGGTCCTTTAGAATAGAGT+TGG | - | chr2_1:71111584-71111603 | None:intergenic | 35.0% |
| CTAAAGGACCTAATATTGGT+AGG | + | chr2_1:71111592-71111611 | Msa0222100:intron | 35.0% | |
| GTTGTTACAGATAGTTGTGA+AGG | + | chr2_1:71111679-71111698 | Msa0222100:intron | 35.0% | |
| ACTATACACGGTCACATATT+AGG | - | chr2_1:71111719-71111738 | None:intergenic | 35.0% | |
| AGACTCTAATTTCTTCACAC+TGG | + | chr2_1:71112425-71112444 | Msa0222100:intron | 35.0% | |
| GACTCTAATTTCTTCACACT+GGG | + | chr2_1:71112426-71112445 | Msa0222100:intron | 35.0% | |
| TGAATTCCCTGAATCAGTTA+AGG | - | chr2_1:71112468-71112487 | None:intergenic | 35.0% | |
| TGCTAGTTAGTTGTTGTATC+TGG | - | chr2_1:71112564-71112583 | None:intergenic | 35.0% | |
| GTCTTCCTTTAGTAAACTCT+TGG | + | chr2_1:71112613-71112632 | Msa0222100:intron | 35.0% | |
| ! | TTATGTTCTAGCTATTAGGC+AGG | - | chr2_1:71112665-71112684 | None:intergenic | 35.0% |
| ! | CACTTTCCCATTTTAAACTG+CGG | + | chr2_1:71112938-71112957 | Msa0222100:intron | 35.0% |
| ! | TTCCATCCGCAGTTTAAAAT+GGG | - | chr2_1:71112947-71112966 | None:intergenic | 35.0% |
| !! | CGTCTTTCAAGTTATGGAAA+AGG | - | chr2_1:71113111-71113130 | None:intergenic | 35.0% |
| !! | TAGTGCTTTGGAAACTTGAT+TGG | + | chr2_1:71113187-71113206 | Msa0222100:intron | 35.0% |
| ! | ATGGTTGCTCCTATCAATTT+TGG | - | chr2_1:71113243-71113262 | None:intergenic | 35.0% |
| !! | CTTTCTCTTTTCTTTTCAGG+AGG | + | chr2_1:71113386-71113405 | Msa0222100:intron | 35.0% |
| AAGAATCCTTAACGAGTCAT+TGG | + | chr2_1:71113423-71113442 | Msa0222100:CDS | 35.0% | |
| AGACAATCATGACAACCTTA+AGG | + | chr2_1:71113494-71113513 | Msa0222100:three_prime_UTR | 35.0% | |
| GACAATCATGACAACCTTAA+GGG | + | chr2_1:71113495-71113514 | Msa0222100:three_prime_UTR | 35.0% | |
| ! | GTTAGTGCAATTTTCCCTTA+AGG | - | chr2_1:71113512-71113531 | None:intergenic | 35.0% |
| AATTGCACTAACCTCCTTTA+AGG | + | chr2_1:71113520-71113539 | Msa0222100:three_prime_UTR | 35.0% | |
| AATAGGCAGAAGAAGATTGG+GGG | - | chr2_1:71109189-71109208 | None:intergenic | 40.0% | |
| CAATAGGCAGAAGAAGATTG+GGG | - | chr2_1:71109190-71109209 | None:intergenic | 40.0% | |
| TGTTCAAGAATCACTGTGCA+TGG | - | chr2_1:71109232-71109251 | None:intergenic | 40.0% | |
| ! | CTTGGCTCGTCTTAAATCTA+AGG | - | chr2_1:71109326-71109345 | None:intergenic | 40.0% |
| ! | CTTAGATTTAAGACGAGCCA+AGG | + | chr2_1:71109324-71109343 | Msa0222100:intron | 40.0% |
| ! | TTTTGCTCTTGCAAATCCCT+TGG | - | chr2_1:71109344-71109363 | None:intergenic | 40.0% |
| CGTTCCTGTTATGGTTAAGT+TGG | + | chr2_1:71109763-71109782 | Msa0222100:intron | 40.0% | |
| AGACCCAACTTAACCATAAC+AGG | - | chr2_1:71109770-71109789 | None:intergenic | 40.0% | |
| ! | AATGAGACATGAAGAGTGCA+TGG | - | chr2_1:71109843-71109862 | None:intergenic | 40.0% |
| TAAAGCCTGTAATAAGGTGG+TGG | - | chr2_1:71109970-71109989 | None:intergenic | 40.0% | |
| TAAGTTCCTTCAATTGGTGG+TGG | - | chr2_1:71110033-71110052 | None:intergenic | 40.0% | |
| GGAACTTATATCTGTTTCGG+AGG | + | chr2_1:71110045-71110064 | Msa0222100:CDS | 40.0% | |
| AGTCGTGAAATCAACCTCAT+GGG | - | chr2_1:71110759-71110778 | None:intergenic | 40.0% | |
| TGGCAGCAACTCTAACTATT+TGG | + | chr2_1:71110803-71110822 | Msa0222100:intron | 40.0% | |
| ! | TTTGAAGTCTTTGGGCTTCA+TGG | - | chr2_1:71110939-71110958 | None:intergenic | 40.0% |
| CACATTTGATACTACCGGAT+AGG | + | chr2_1:71111000-71111019 | Msa0222100:intron | 40.0% | |
| !!! | CATCTTCGATAGTTTTGGTG+GGG | + | chr2_1:71111099-71111118 | Msa0222100:intron | 40.0% |
| !! | ATATTTTGGACCACCAAACC+TGG | + | chr2_1:71111278-71111297 | Msa0222100:intron | 40.0% |
| GCAAAAAAATCCAGGTTTGG+TGG | - | chr2_1:71111291-71111310 | None:intergenic | 40.0% | |
| !! | ATCAGGTTGAGTTCAGTCTA+GGG | + | chr2_1:71111325-71111344 | Msa0222100:intron | 40.0% |
| TCAAGGTTTATGGTTGGATG+AGG | - | chr2_1:71111367-71111386 | None:intergenic | 40.0% | |
| CCTTTCTCAAGGTTTATGGT+TGG | - | chr2_1:71111373-71111392 | None:intergenic | 40.0% | |
| CCAACCATAAACCTTGAGAA+AGG | + | chr2_1:71111370-71111389 | Msa0222100:intron | 40.0% | |
| ACTGAACTCAACCTTTCTCA+AGG | - | chr2_1:71111384-71111403 | None:intergenic | 40.0% | |
| TGAGTTCAGTCTTGCAAAAC+AGG | + | chr2_1:71111394-71111413 | Msa0222100:intron | 40.0% | |
| GAGTTCAGTCTTGCAAAACA+GGG | + | chr2_1:71111395-71111414 | Msa0222100:intron | 40.0% | |
| ACGATATGATCACGCCAAAT+AGG | - | chr2_1:71111489-71111508 | None:intergenic | 40.0% | |
| TAGTGATGTTCTACCAAGCT+TGG | + | chr2_1:71111542-71111561 | Msa0222100:CDS | 40.0% | |
| TACCAAGCTTGGAAGAACAA+GGG | + | chr2_1:71111553-71111572 | Msa0222100:CDS | 40.0% | |
| GTACGCCAACTCTATTCTAA+AGG | + | chr2_1:71111576-71111595 | Msa0222100:CDS | 40.0% | |
| CCACAAGTCTAGACTATACA+CGG | - | chr2_1:71111731-71111750 | None:intergenic | 40.0% | |
| CGTGTATAGTCTAGACTTGT+GGG | + | chr2_1:71111729-71111748 | Msa0222100:intron | 40.0% | |
| TAGATTTCAAGAAGGAGCTG+AGG | + | chr2_1:71111913-71111932 | Msa0222100:intron | 40.0% | |
| AGAGACCATCACAATATGCA+AGG | + | chr2_1:71111991-71112010 | Msa0222100:CDS | 40.0% | |
| ACTCTCCTTGCATATTGTGA+TGG | - | chr2_1:71111999-71112018 | None:intergenic | 40.0% | |
| GGAACATTGTATACCTGATG+AGG | - | chr2_1:71112077-71112096 | None:intergenic | 40.0% | |
| AAGCTGTGGAGGACATAAAT+AGG | + | chr2_1:71112245-71112264 | Msa0222100:CDS | 40.0% | |
| GTGGATTTAGAAACCCATGA+AGG | - | chr2_1:71112363-71112382 | None:intergenic | 40.0% | |
| TGTATCTGGTGAGTCAGTTA+AGG | - | chr2_1:71112550-71112569 | None:intergenic | 40.0% | |
| ATGGGTGTATGAACCTATGA+GGG | - | chr2_1:71112823-71112842 | None:intergenic | 40.0% | |
| ! | TTCCCATTTTAAACTGCGGA+TGG | + | chr2_1:71112942-71112961 | Msa0222100:intron | 40.0% |
| CTTCCATCCGCAGTTTAAAA+TGG | - | chr2_1:71112948-71112967 | None:intergenic | 40.0% | |
| !! | AGGAACCGTCTTTCAAGTTA+TGG | - | chr2_1:71113117-71113136 | None:intergenic | 40.0% |
| ATAACTTGAAAGACGGTTCC+TGG | + | chr2_1:71113116-71113135 | Msa0222100:intron | 40.0% | |
| TGACAAAACTGGGCAAAGAA+GGG | - | chr2_1:71113270-71113289 | None:intergenic | 40.0% | |
| ATGACAAAACTGGGCAAAGA+AGG | - | chr2_1:71113271-71113290 | None:intergenic | 40.0% | |
| !! | TTCTTTGCCCAGTTTTGTCA+TGG | + | chr2_1:71113270-71113289 | Msa0222100:intron | 40.0% |
| TCTTTGGCCATGACAAAACT+GGG | - | chr2_1:71113280-71113299 | None:intergenic | 40.0% | |
| CAAGAATCACTGTGCATGGT+TGG | - | chr2_1:71109228-71109247 | None:intergenic | 45.0% | |
| AAATTCGGGAGGAGCTTACT+AGG | - | chr2_1:71109266-71109285 | None:intergenic | 45.0% | |
| ATGCAGAGAAGAAATTCGGG+AGG | - | chr2_1:71109277-71109296 | None:intergenic | 45.0% | |
| !! | TGTAATAAGGTGGTGGTGGT+GGG | - | chr2_1:71109963-71109982 | None:intergenic | 45.0% |
| CATGACAACTTTGCTGCGTT+TGG | + | chr2_1:71110399-71110418 | Msa0222100:intron | 45.0% | |
| GTTAGAGTAAGCTCCCATCA+TGG | + | chr2_1:71110711-71110730 | Msa0222100:intron | 45.0% | |
| TCCTTAAACCCTGCCATGAT+GGG | - | chr2_1:71110727-71110746 | None:intergenic | 45.0% | |
| TTCCTTAAACCCTGCCATGA+TGG | - | chr2_1:71110728-71110747 | None:intergenic | 45.0% | |
| TCATGGCAGGGTTTAAGGAA+TGG | + | chr2_1:71110728-71110747 | Msa0222100:intron | 45.0% | |
| AAGGAATGGTTAGACCCATG+AGG | + | chr2_1:71110742-71110761 | Msa0222100:intron | 45.0% | |
| GAGTCGTGAAATCAACCTCA+TGG | - | chr2_1:71110760-71110779 | None:intergenic | 45.0% | |
| ACTCAAATGAGTGACCTCCT+AGG | + | chr2_1:71110776-71110795 | Msa0222100:intron | 45.0% | |
| AAGTCTTTGGGCTTCATGGA+TGG | - | chr2_1:71110935-71110954 | None:intergenic | 45.0% | |
| TGAGACTTTGGGTACCTATC+CGG | - | chr2_1:71111017-71111036 | None:intergenic | 45.0% | |
| !! | GATCAGGTTGAGTTCAGTCT+AGG | + | chr2_1:71111324-71111343 | Msa0222100:intron | 45.0% |
| TTATGGTTGGATGAGGCACA+TGG | - | chr2_1:71111360-71111379 | None:intergenic | 45.0% | |
| CTACCAAGCTTGGAAGAACA+AGG | + | chr2_1:71111552-71111571 | Msa0222100:CDS | 45.0% | |
| ACCAAGCTTGGAAGAACAAG+GGG | + | chr2_1:71111554-71111573 | Msa0222100:CDS | 45.0% | |
| CCGTGTATAGTCTAGACTTG+TGG | + | chr2_1:71111728-71111747 | Msa0222100:intron | 45.0% | |
| ! | ACTTGTGGGCCTGATCTTTT+AGG | + | chr2_1:71111743-71111762 | Msa0222100:intron | 45.0% |
| CTAGTAGAGACACCATGCAT+TGG | - | chr2_1:71111854-71111873 | None:intergenic | 45.0% | |
| AAGGAGCTGAGGTCACTTAA+TGG | + | chr2_1:71111924-71111943 | Msa0222100:CDS | 45.0% | |
| GAGGACGCAGTGAATTCAAA+AGG | - | chr2_1:71112058-71112077 | None:intergenic | 45.0% | |
| !! | TGCCTTGATTTGGATGCTTC+TGG | + | chr2_1:71112120-71112139 | Msa0222100:intron | 45.0% |
| !! | GACCAGAAGCATCCAAATCA+AGG | - | chr2_1:71112125-71112144 | None:intergenic | 45.0% |
| ! | TGTCCTCCACAGCTTGTTTA+CGG | - | chr2_1:71112240-71112259 | None:intergenic | 45.0% |
| GGTGAGTCAGTTAAGGTTGT+TGG | - | chr2_1:71112543-71112562 | None:intergenic | 45.0% | |
| TGCAAAACCCGACGAATCTA+AGG | + | chr2_1:71112788-71112807 | Msa0222100:intron | 45.0% | |
| CATGGGTGTATGAACCTATG+AGG | - | chr2_1:71112824-71112843 | None:intergenic | 45.0% | |
| CTCATAGGTTCATACACCCA+TGG | + | chr2_1:71112822-71112841 | Msa0222100:intron | 45.0% | |
| AAACCCTGGTAAGTAGCCAT+GGG | - | chr2_1:71112841-71112860 | None:intergenic | 45.0% | |
| AAAACCCTGGTAAGTAGCCA+TGG | - | chr2_1:71112842-71112861 | None:intergenic | 45.0% | |
| GTCTTTGGCCATGACAAAAC+TGG | - | chr2_1:71113281-71113300 | None:intergenic | 45.0% | |
| GTGTTGCCAATGACTCGTTA+AGG | - | chr2_1:71113432-71113451 | None:intergenic | 45.0% | |
| GAGTCATTGGCAACACTTGA+TGG | + | chr2_1:71113436-71113455 | Msa0222100:CDS | 45.0% | |
| !! | CTGTAATAAGGTGGTGGTGG+TGG | - | chr2_1:71109964-71109983 | None:intergenic | 50.0% |
| CACCACCACCACCTTATTAC+AGG | + | chr2_1:71109962-71109981 | Msa0222100:CDS | 50.0% | |
| ! | AGCCTGTAATAAGGTGGTGG+TGG | - | chr2_1:71109967-71109986 | None:intergenic | 50.0% |
| !! | GTTCCTTCAATTGGTGGTGG+AGG | - | chr2_1:71110030-71110049 | None:intergenic | 50.0% |
| AATGCTTATCCAAACGGGCC+TGG | + | chr2_1:71110687-71110706 | Msa0222100:intron | 50.0% | |
| TGGGAGCTTACTCTAACACC+AGG | - | chr2_1:71110708-71110727 | None:intergenic | 50.0% | |
| AGTAAGCTCCCATCATGGCA+GGG | + | chr2_1:71110716-71110735 | Msa0222100:intron | 50.0% | |
| TCCCATCATGGCAGGGTTTA+AGG | + | chr2_1:71110723-71110742 | Msa0222100:intron | 50.0% | |
| TGAGTGACCTCCTAGGCATA+TGG | + | chr2_1:71110783-71110802 | Msa0222100:intron | 50.0% | |
| AGAGTTGCTGCCATATGCCT+AGG | - | chr2_1:71110796-71110815 | None:intergenic | 50.0% | |
| !!! | CGATAGTTTTGGTGGGGACA+AGG | + | chr2_1:71111105-71111124 | Msa0222100:intron | 50.0% |
| !! | GTTTTGGTGGGGACAAGGAT+TGG | + | chr2_1:71111110-71111129 | Msa0222100:intron | 50.0% |
| ACCCCTTGTTCTTCCAAGCT+TGG | - | chr2_1:71111558-71111577 | None:intergenic | 50.0% | |
| !! | GTCACAAAAGCGCCAATGCA+TGG | + | chr2_1:71111839-71111858 | Msa0222100:intron | 50.0% |
| GAATTCACTGCGTCCTCATC+AGG | + | chr2_1:71112061-71112080 | Msa0222100:CDS | 50.0% | |
| ! | AACCCGACGAATCTAAGGCT+TGG | + | chr2_1:71112793-71112812 | Msa0222100:intron | 50.0% |
| GACCAAGCCTTAGATTCGTC+GGG | - | chr2_1:71112798-71112817 | None:intergenic | 50.0% | |
| GGACCAAGCCTTAGATTCGT+CGG | - | chr2_1:71112799-71112818 | None:intergenic | 50.0% | |
| GGTGTATGAACCTATGAGGG+AGG | - | chr2_1:71112820-71112839 | None:intergenic | 50.0% | |
| TACACCCATGGCTACTTACC+AGG | + | chr2_1:71112834-71112853 | Msa0222100:intron | 50.0% | |
| ACACCCATGGCTACTTACCA+GGG | + | chr2_1:71112835-71112854 | Msa0222100:intron | 50.0% | |
| CTGGGCAAAGAAGGGAGAAA+TGG | - | chr2_1:71113262-71113281 | None:intergenic | 50.0% | |
| CGGGAGGAGCTTACTAGGTT+TGG | - | chr2_1:71109261-71109280 | None:intergenic | 55.0% | |
| !! | TCAATTGGTGGTGGAGGCTC+TGG | - | chr2_1:71110024-71110043 | None:intergenic | 55.0% |
| GAGCCTCCACCACCAATTGA+AGG | + | chr2_1:71110024-71110043 | Msa0222100:CDS | 55.0% | |
| ACTCTAACACCAGGCCCGTT+TGG | - | chr2_1:71110699-71110718 | None:intergenic | 55.0% | |
| GAGTAAGCTCCCATCATGGC+AGG | + | chr2_1:71110715-71110734 | Msa0222100:intron | 55.0% | |
| GTTGCTGCCATATGCCTAGG+AGG | - | chr2_1:71110793-71110812 | None:intergenic | 55.0% | |
| !! | AGAGCGCCGTAAACAAGCTG+TGG | + | chr2_1:71112231-71112250 | Msa0222100:CDS | 55.0% |
| ! | AAGGCTTGGTCCTCCCTCAT+AGG | + | chr2_1:71112807-71112826 | Msa0222100:intron | 55.0% |
| !! | GAGGCTCTGGAGCAGACTCA+GGG | - | chr2_1:71110011-71110030 | None:intergenic | 60.0% |
| GCGCCGTAAACAAGCTGTGG+AGG | + | chr2_1:71112234-71112253 | Msa0222100:CDS | 60.0% | |
| !! | GGAGGCTCTGGAGCAGACTC+AGG | - | chr2_1:71110012-71110031 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 71109162 | 71113700 | 71109162 | ID=Msa0222100;Name=Msa0222100 |
| chr2_1 | mRNA | 71109162 | 71113700 | 71109162 | ID=Msa0222100-mRNA-1;Parent=Msa0222100;Name=Msa0222100-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.8|0.66|1|0.8|0.66|6|235|173 |
| chr2_1 | exon | 71109162 | 71109167 | 71109162 | ID=Msa0222100-mRNA-1:exon:20434;Parent=Msa0222100-mRNA-1 |
| chr2_1 | exon | 71109934 | 71110077 | 71109934 | ID=Msa0222100-mRNA-1:exon:20435;Parent=Msa0222100-mRNA-1 |
| chr2_1 | exon | 71111540 | 71111609 | 71111540 | ID=Msa0222100-mRNA-1:exon:20436;Parent=Msa0222100-mRNA-1 |
| chr2_1 | exon | 71111916 | 71112082 | 71111916 | ID=Msa0222100-mRNA-1:exon:20437;Parent=Msa0222100-mRNA-1 |
| chr2_1 | exon | 71112193 | 71112266 | 71112193 | ID=Msa0222100-mRNA-1:exon:20438;Parent=Msa0222100-mRNA-1 |
| chr2_1 | exon | 71113405 | 71113700 | 71113405 | ID=Msa0222100-mRNA-1:exon:20439;Parent=Msa0222100-mRNA-1 |
| chr2_1 | CDS | 71109162 | 71109167 | 71109162 | ID=Msa0222100-mRNA-1:cds;Parent=Msa0222100-mRNA-1 |
| chr2_1 | CDS | 71109934 | 71110077 | 71109934 | ID=Msa0222100-mRNA-1:cds;Parent=Msa0222100-mRNA-1 |
| chr2_1 | CDS | 71111540 | 71111609 | 71111540 | ID=Msa0222100-mRNA-1:cds;Parent=Msa0222100-mRNA-1 |
| chr2_1 | CDS | 71111916 | 71112082 | 71111916 | ID=Msa0222100-mRNA-1:cds;Parent=Msa0222100-mRNA-1 |
| chr2_1 | CDS | 71112193 | 71112266 | 71112193 | ID=Msa0222100-mRNA-1:cds;Parent=Msa0222100-mRNA-1 |
| chr2_1 | CDS | 71113405 | 71113465 | 71113405 | ID=Msa0222100-mRNA-1:cds;Parent=Msa0222100-mRNA-1 |
| chr2_1 | three_prime_UTR | 71113466 | 71113700 | 71113466 | ID=Msa0222100-mRNA-1:three_prime_utr;Parent=Msa0222100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
