Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222640 | XP_003597301.2 | 90.827 | 774 | 52 | 1 | 1 | 755 | 1 | 774 | 0.0 | 1392 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222640 | sp|F4JXF1|GAF1_ARATH | 54.942 | 344 | 128 | 5 | 1 | 317 | 1 | 344 | 2.92e-120 | 376 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222640 | G7IU96 | 90.827 | 774 | 52 | 1 | 1 | 755 | 1 | 774 | 0.0 | 1392 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0222640 | Msa0391010 | 0.849715 | 2.706373e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222640 | MtrunA17_Chr2g0327631 | 90.827 | 774 | 52 | 1 | 1 | 755 | 1 | 774 | 0.0 | 1392 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0222640 | AT5G59980.1 | 54.942 | 344 | 128 | 5 | 1 | 317 | 1 | 344 | 2.96e-121 | 376 |
Msa0222640 | AT5G59980.4 | 54.942 | 344 | 128 | 5 | 1 | 317 | 1 | 344 | 9.13e-121 | 378 |
Msa0222640 | AT5G59980.3 | 54.942 | 344 | 128 | 5 | 1 | 317 | 1 | 344 | 1.01e-120 | 378 |
Msa0222640 | AT5G59980.2 | 54.942 | 344 | 128 | 5 | 1 | 317 | 1 | 344 | 1.96e-120 | 378 |
Find 150 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTTCAACTGCATCAGTTTC+TGG | 0.127926 | 2_1:-71926487 | None:intergenic |
ACATCTGAATCGTTGAAATT+TGG | 0.153936 | 2_1:-71926109 | None:intergenic |
AAATTAACTGCCTCCTTAAT+TGG | 0.169103 | 2_1:-71923569 | None:intergenic |
TGCAGTCTTTGATGCTTTAC+AGG | 0.185897 | 2_1:-71925372 | None:intergenic |
AAATAACCCATCGAGCTTTC+AGG | 0.193219 | 2_1:-71927122 | None:intergenic |
TTTCAGCTAAGTTGCCATTT+AGG | 0.209661 | 2_1:+71923376 | Msa0222640:CDS |
CTCTATCTTCTCAATTAATA+AGG | 0.277921 | 2_1:+71925481 | Msa0222640:CDS |
ATAGATTGCTTCAACCTAAA+TGG | 0.280505 | 2_1:-71923390 | None:intergenic |
GAAGCAATCTATGGTTAAAA+TGG | 0.299672 | 2_1:+71923401 | Msa0222640:CDS |
TTGTTGACGGCGGTGGAATC+AGG | 0.302526 | 2_1:-71921819 | None:intergenic |
GCTGTTAAAGCAATGGAATT+AGG | 0.306716 | 2_1:+71921928 | Msa0222640:CDS |
TGATATCCTGTTGGATGATA+TGG | 0.316857 | 2_1:+71925331 | Msa0222640:CDS |
TCGGGAGCTTCTTGGAGTTT+CGG | 0.325845 | 2_1:+71922083 | Msa0222640:CDS |
AAGCTTCATCGGGAGCTTCT+TGG | 0.334361 | 2_1:+71922075 | Msa0222640:CDS |
ATTTAGGTTGAAGCAATCTA+TGG | 0.341392 | 2_1:+71923392 | Msa0222640:CDS |
ATCCAGGTCGATTGCGAGTT+AGG | 0.341616 | 2_1:+71926911 | Msa0222640:intron |
TTATTGCTGATGTCCAATTA+AGG | 0.343178 | 2_1:+71923556 | Msa0222640:CDS |
GGCTGCTCAGTTAAGTTGTT+GGG | 0.354319 | 2_1:-71925551 | None:intergenic |
CTGACAAATGCCACAAAGTT+AGG | 0.354766 | 2_1:+71926082 | Msa0222640:CDS |
TTATCTTCCACCATAACTTC+TGG | 0.356790 | 2_1:-71926586 | None:intergenic |
ATCTCAAGGTTATAAATTCC+AGG | 0.359075 | 2_1:+71925433 | Msa0222640:CDS |
ACAGTGGACAGTTATATTAA+TGG | 0.363051 | 2_1:+71925836 | Msa0222640:CDS |
GGTTTGCCGCTTGCGCCACC+AGG | 0.365286 | 2_1:-71921798 | None:intergenic |
TTGTGTTGAGAATGCTTTGC+AGG | 0.370864 | 2_1:+71922143 | Msa0222640:CDS |
CGCTTCAATGGAAAGAAAAC+TGG | 0.371087 | 2_1:-71926943 | None:intergenic |
TTGGATGATATGGAAAATTC+TGG | 0.374387 | 2_1:+71925341 | Msa0222640:CDS |
GACTGCTTGGTTAAGTTGTT+AGG | 0.375394 | 2_1:-71925905 | None:intergenic |
TGAGGATCAACTGAAGATTT+AGG | 0.375525 | 2_1:-71926235 | None:intergenic |
CGTCGTCGGCGAAGCTTCAT+CGG | 0.385082 | 2_1:+71922064 | Msa0222640:CDS |
GCCTCTGTTCAGTCTGTCTC+AGG | 0.385373 | 2_1:+71926646 | Msa0222640:CDS |
CTTTAACAGCGAGGCGCGTT+CGG | 0.386004 | 2_1:-71921915 | None:intergenic |
TGTGTGTGTTTCCCTAAGTT+TGG | 0.386038 | 2_1:-71927148 | None:intergenic |
AGGAGAGAAGAGAGAGAAAG+TGG | 0.387074 | 2_1:-71922021 | None:intergenic |
ACATTCATTTCCAGAAGTTA+TGG | 0.390451 | 2_1:+71926576 | Msa0222640:CDS |
ATAGAGAGAGTGTCATTTGC+AGG | 0.391299 | 2_1:-71925464 | None:intergenic |
TCATTTCATCAAAAGGTGTT+TGG | 0.391879 | 2_1:-71926525 | None:intergenic |
ATTGAAGCGGTTGTTTCATA+TGG | 0.392099 | 2_1:+71926957 | Msa0222640:CDS |
CCTTCGGTGAATGAACTTAG+AGG | 0.398720 | 2_1:+71924767 | Msa0222640:CDS |
AAATCATAAGTCTTCAAAAT+CGG | 0.418135 | 2_1:-71922189 | None:intergenic |
ATATGAAACAACCGCTTCAA+TGG | 0.418609 | 2_1:-71926955 | None:intergenic |
TCATCAAAAGGTGTTTGGTC+AGG | 0.422171 | 2_1:-71926520 | None:intergenic |
GATGATCTATCGTCTTGCTT+TGG | 0.422900 | 2_1:-71925593 | None:intergenic |
GGGTTATTTAGTCCAAACTT+AGG | 0.428181 | 2_1:+71927136 | Msa0222640:three_prime_UTR |
TCAGTTAAGTTGTTGGGTAC+AGG | 0.428275 | 2_1:-71925545 | None:intergenic |
AGATGTTGATTGCACCCAAT+TGG | 0.429278 | 2_1:+71926126 | Msa0222640:CDS |
GGGAAACACACACAAACAAT+TGG | 0.429734 | 2_1:+71927157 | Msa0222640:three_prime_UTR |
GTGAAGGGTAAGGTATGTTT+AGG | 0.429828 | 2_1:-71921855 | None:intergenic |
AATAACCCATCGAGCTTTCA+GGG | 0.434182 | 2_1:-71927121 | None:intergenic |
TTTCGGCTTCTACTCCGTTT+CGG | 0.434992 | 2_1:+71922100 | Msa0222640:CDS |
ATTTGGAAGTCCTAACTTTG+TGG | 0.442083 | 2_1:-71926092 | None:intergenic |
ACTTAACTGAGCAGCCCAAC+AGG | 0.442105 | 2_1:+71925558 | Msa0222640:CDS |
CAGGCGAATGCTTTGAATGC+GGG | 0.445851 | 2_1:+71922162 | Msa0222640:CDS |
GCAAGACGATAGATCATCAT+TGG | 0.446477 | 2_1:+71925598 | Msa0222640:CDS |
GGATGGTTGTAGCAGAATAG+TGG | 0.446988 | 2_1:+71927178 | Msa0222640:three_prime_UTR |
GGGCTGCTCAGTTAAGTTGT+TGG | 0.447613 | 2_1:-71925552 | None:intergenic |
GATTGAGCAACGATGGTTAT+CGG | 0.451011 | 2_1:-71921995 | None:intergenic |
GACCCTCTCTCCAGTGGGGA+AGG | 0.454890 | 2_1:+71925308 | Msa0222640:CDS |
GGTTATTTAGTCCAAACTTA+GGG | 0.459756 | 2_1:+71927137 | Msa0222640:three_prime_UTR |
GCAGCTATTTACCTTGGCAT+TGG | 0.460339 | 2_1:-71923592 | None:intergenic |
TGAGACAAATGGTGCGAAGT+TGG | 0.464101 | 2_1:+71925721 | Msa0222640:CDS |
CGTTCCGTTTCTTGCGTCGT+CGG | 0.466825 | 2_1:+71922050 | Msa0222640:CDS |
CACCAGGGTTTAAGAGTTGA+GGG | 0.467896 | 2_1:-71921782 | None:intergenic |
ATTCCACCGCCGTCAACAAT+GGG | 0.469067 | 2_1:+71921823 | Msa0222640:exon |
ATCCTCGTGTACTGCCGAAA+CGG | 0.470448 | 2_1:-71922114 | None:intergenic |
ACATGTAGCTGTTGATTGAC+TGG | 0.472181 | 2_1:+71924708 | Msa0222640:intron |
GGACAAACATCAGTCCTGTT+GGG | 0.475053 | 2_1:-71925572 | None:intergenic |
AAACCCATTGTTGACGGCGG+TGG | 0.476178 | 2_1:-71921826 | None:intergenic |
TCGCTTTCTCCTTAGAGCAT+TGG | 0.480554 | 2_1:-71925210 | None:intergenic |
CATTTGCAGGTAAGAAATCC+TGG | 0.480981 | 2_1:-71925451 | None:intergenic |
TGCTTTGCATGTTCTGTAGC+CGG | 0.485108 | 2_1:-71926310 | None:intergenic |
GCTTTCAGGGTTGAAGAAAC+CGG | 0.489321 | 2_1:-71927108 | None:intergenic |
GATTCCACCGCCGTCAACAA+TGG | 0.491980 | 2_1:+71921822 | Msa0222640:exon |
TGGACAAACATCAGTCCTGT+TGG | 0.492256 | 2_1:-71925573 | None:intergenic |
CTTCAACCCTGAAAGCTCGA+TGG | 0.494696 | 2_1:+71927115 | Msa0222640:three_prime_UTR |
GTGGAGCCTGTCGGACTGCT+TGG | 0.497665 | 2_1:-71925918 | None:intergenic |
TTTGTGGTGGGTGAAGGGTA+AGG | 0.499647 | 2_1:-71921865 | None:intergenic |
GGAGAGAAGAGAGAGAAAGT+GGG | 0.501936 | 2_1:-71922020 | None:intergenic |
ATTCTATTGATTCAGATGTC+CGG | 0.503522 | 2_1:+71925753 | Msa0222640:CDS |
TGATGTTGCTTGTGAGAGAA+TGG | 0.507181 | 2_1:+71922245 | Msa0222640:CDS |
TTGTACTGAAACAAAGTCAA+TGG | 0.507684 | 2_1:-71925399 | None:intergenic |
CCACCAGGGTTTAAGAGTTG+AGG | 0.514268 | 2_1:-71921783 | None:intergenic |
TTCAACCCTGAAAGCTCGAT+GGG | 0.515368 | 2_1:+71927116 | Msa0222640:three_prime_UTR |
GAGATAGACACTGAGACAAA+TGG | 0.516634 | 2_1:+71925710 | Msa0222640:CDS |
TTCGCCGACGACGCAAGAAA+CGG | 0.517581 | 2_1:-71922054 | None:intergenic |
GAGAGAAGAGAGAGAAAGTG+GGG | 0.522755 | 2_1:-71922019 | None:intergenic |
GTCGTCGGCGAAGCTTCATC+GGG | 0.524279 | 2_1:+71922065 | Msa0222640:CDS |
CTTAGAGGGCCGTGTGATGT+TGG | 0.524883 | 2_1:+71924782 | Msa0222640:CDS |
CAGGATATCACCTTCCCCAC+TGG | 0.532237 | 2_1:-71925318 | None:intergenic |
ATTCTCAAGAGTTGCTAAAG+TGG | 0.536803 | 2_1:+71925285 | Msa0222640:CDS |
CTCCGTTTCGGCAGTACACG+AGG | 0.540787 | 2_1:+71922112 | Msa0222640:CDS |
GCTTACAACCGCACGATGAA+AGG | 0.545367 | 2_1:+71921964 | Msa0222640:CDS |
CATCTTGCGCAAGAGAAATG+TGG | 0.546884 | 2_1:-71925937 | None:intergenic |
CACCTTCCCCACTGGAGAGA+GGG | 0.549180 | 2_1:-71925310 | None:intergenic |
TGGAATTTATAACCTTGAGA+TGG | 0.549686 | 2_1:-71925431 | None:intergenic |
TTTCTCTTGCGCAAGATGAA+AGG | 0.550064 | 2_1:+71925942 | Msa0222640:CDS |
CAAAGCATTCTCAACACAAA+CGG | 0.551812 | 2_1:-71922139 | None:intergenic |
TCGAAGAAACCCATTGTTGA+CGG | 0.554637 | 2_1:-71921832 | None:intergenic |
AACCCTCAACTCTTAAACCC+TGG | 0.555631 | 2_1:+71921780 | Msa0222640:five_prime_UTR |
TATGGTTAAAATGGCTACCC+AGG | 0.555823 | 2_1:+71923410 | Msa0222640:CDS |
ACTTTCTCATTAATATTGTG+AGG | 0.558920 | 2_1:-71926253 | None:intergenic |
CAAGAAACGGAACGACATTG+AGG | 0.560522 | 2_1:-71922041 | None:intergenic |
ACTTAACCAAGCAGTCCGAC+AGG | 0.568640 | 2_1:+71925912 | Msa0222640:CDS |
AACACACACAAACAATTGGA+TGG | 0.571465 | 2_1:+71927161 | Msa0222640:three_prime_UTR |
TTCTCAAGAGTTGCTAAAGT+GGG | 0.573177 | 2_1:+71925286 | Msa0222640:CDS |
ATTTATAACCTTGAGATGGA+AGG | 0.574614 | 2_1:-71925427 | None:intergenic |
GCAGTTAATTTCCAATGCCA+AGG | 0.577663 | 2_1:+71923581 | Msa0222640:CDS |
CTGTTGATTGACTGGACTCG+TGG | 0.578599 | 2_1:+71924716 | Msa0222640:CDS |
GTGCATCTCAAGTAATGTGT+TGG | 0.580319 | 2_1:+71926180 | Msa0222640:CDS |
GCGCCTCGCTGTTAAAGCAA+TGG | 0.581964 | 2_1:+71921921 | Msa0222640:CDS |
TTCATTTCCAGAAGTTATGG+TGG | 0.582059 | 2_1:+71926579 | Msa0222640:CDS |
AGTCTTTGATGCTTTACAGG+AGG | 0.583066 | 2_1:-71925369 | None:intergenic |
GTTTGCCGCTTGCGCCACCA+GGG | 0.583866 | 2_1:-71921797 | None:intergenic |
GAAATTTCTACACCATCCAT+AGG | 0.588034 | 2_1:+71926277 | Msa0222640:CDS |
GACGATAGATCATCATTGGA+TGG | 0.590101 | 2_1:+71925602 | Msa0222640:CDS |
TTAAACCCTGGTGGCGCAAG+CGG | 0.590775 | 2_1:+71921792 | Msa0222640:five_prime_UTR |
GAGAAAGCGATTTCATAAAG+AGG | 0.596412 | 2_1:+71925223 | Msa0222640:CDS |
AAGTGGGACCCTCTCTCCAG+TGG | 0.596526 | 2_1:+71925302 | Msa0222640:CDS |
AGTGGGACCCTCTCTCCAGT+GGG | 0.598483 | 2_1:+71925303 | Msa0222640:CDS |
AACAAATTTCCAACATCACA+CGG | 0.601223 | 2_1:-71924791 | None:intergenic |
GCAATGGAATTAGGTTACAC+AGG | 0.603237 | 2_1:+71921937 | Msa0222640:CDS |
AAACATCACATTGTGAGATG+TGG | 0.603238 | 2_1:+71925632 | Msa0222640:CDS |
TACTTCTGTAACATCAGTGG+AGG | 0.603425 | 2_1:+71926447 | Msa0222640:CDS |
AGGCGAATGCTTTGAATGCG+GGG | 0.604599 | 2_1:+71922163 | Msa0222640:CDS |
AAAAGAAAATCAGTCAACAC+TGG | 0.607104 | 2_1:+71925880 | Msa0222640:CDS |
CCTCTAAGTTCATTCACCGA+AGG | 0.609236 | 2_1:-71924767 | None:intergenic |
TCACCTTCCCCACTGGAGAG+AGG | 0.612417 | 2_1:-71925311 | None:intergenic |
ATCTACTTCTGTAACATCAG+TGG | 0.614608 | 2_1:+71926444 | Msa0222640:CDS |
TGCAAGTAACAATAATAACC+TGG | 0.617391 | 2_1:-71927042 | None:intergenic |
TCTGTAACATCAGTGGAGGA+TGG | 0.618825 | 2_1:+71926451 | Msa0222640:CDS |
CAAGACAGCCTTCCATCTCA+AGG | 0.620080 | 2_1:+71925419 | Msa0222640:CDS |
AAGAGAAATGTGGAGCCTGT+CGG | 0.622702 | 2_1:-71925927 | None:intergenic |
GCAGGCGAATGCTTTGAATG+CGG | 0.627701 | 2_1:+71922161 | Msa0222640:CDS |
TGGGGAAGGTGATATCCTGT+TGG | 0.627773 | 2_1:+71925322 | Msa0222640:CDS |
TCAAACGCATTCTGATTCAA+CGG | 0.628223 | 2_1:-71922225 | None:intergenic |
TTGCTGATGTCCAATTAAGG+AGG | 0.628253 | 2_1:+71923559 | Msa0222640:CDS |
TATTGATTCAGATGTCCGGA+TGG | 0.633396 | 2_1:+71925757 | Msa0222640:CDS |
CTTCGGTGAATGAACTTAGA+GGG | 0.633683 | 2_1:+71924768 | Msa0222640:CDS |
GATGGTTGTAGCAGAATAGT+GGG | 0.636934 | 2_1:+71927179 | Msa0222640:three_prime_UTR |
GATGCATGAAAATTTGCCAA+AGG | 0.640671 | 2_1:+71926378 | Msa0222640:CDS |
GTGGGGAGATTGAGCAACGA+TGG | 0.642528 | 2_1:-71922002 | None:intergenic |
TAAAATTGCTGAGCATACAG+TGG | 0.659450 | 2_1:+71926408 | Msa0222640:CDS |
AATTGCTGAGCATACAGTGG+TGG | 0.659637 | 2_1:+71926411 | Msa0222640:CDS |
ACATTACGCCTTTCATCGTG+CGG | 0.660759 | 2_1:-71921972 | None:intergenic |
ATTCCATTGCTTTAACAGCG+AGG | 0.663497 | 2_1:-71921924 | None:intergenic |
CCTCAACTCTTAAACCCTGG+TGG | 0.693987 | 2_1:+71921783 | Msa0222640:five_prime_UTR |
ATTAATATAACTGTCCACTG+TGG | 0.719711 | 2_1:-71925834 | None:intergenic |
AAGAAACCCATTGTTGACGG+CGG | 0.725801 | 2_1:-71921829 | None:intergenic |
ACCTGAGACAGACTGAACAG+AGG | 0.728353 | 2_1:-71926647 | None:intergenic |
GTGGGACCCTCTCTCCAGTG+GGG | 0.732838 | 2_1:+71925304 | Msa0222640:CDS |
TGTTGCTTGTGAGAGAATGG+CGG | 0.750377 | 2_1:+71922248 | Msa0222640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTTTTTTTTTTTTTTGA+AGG | + | chr2_1:71923245-71923264 | Msa0222640:intron | 10.0% |
!!! | TTTTTGTTTTTAATAAATTG+AGG | + | chr2_1:71923735-71923754 | Msa0222640:intron | 10.0% |
!! | AGAAAAATGTATAAATAAAA+GGG | - | chr2_1:71925057-71925076 | None:intergenic | 10.0% |
!! | AAGAAAAATGTATAAATAAA+AGG | - | chr2_1:71925058-71925077 | None:intergenic | 10.0% |
!!! | TTTTGTTAAGATTATTTTCA+TGG | + | chr2_1:71922412-71922431 | Msa0222640:intron | 15.0% |
!!! | AATAATCAAAAGATTGATTT+TGG | - | chr2_1:71923317-71923336 | None:intergenic | 15.0% |
!! | TGTGATTGTAAATTTATATA+GGG | - | chr2_1:71923620-71923639 | None:intergenic | 15.0% |
!! | ATGTGATTGTAAATTTATAT+AGG | - | chr2_1:71923621-71923640 | None:intergenic | 15.0% |
!! | TATATAAATTTACAATCACA+TGG | + | chr2_1:71923620-71923639 | Msa0222640:intron | 15.0% |
!! | TTATTTAGTCATCATTTATT+TGG | + | chr2_1:71924332-71924351 | Msa0222640:intron | 15.0% |
!!! | AAATTTAAACAGATATTTTG+TGG | - | chr2_1:71924509-71924528 | None:intergenic | 15.0% |
!!! | GAAATTTGTTGTTATTATTT+GGG | + | chr2_1:71924804-71924823 | Msa0222640:intron | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | - | chr2_1:71924994-71925013 | None:intergenic | 15.0% |
!! | AAATCATAAGTCTTCAAAAT+CGG | - | chr2_1:71922192-71922211 | None:intergenic | 20.0% |
!!! | GAAAAAACATTTGAGATTTT+TGG | + | chr2_1:71922306-71922325 | Msa0222640:intron | 20.0% |
!! | TCTTAAAAAGTTAAAATGTG+TGG | + | chr2_1:71922359-71922378 | Msa0222640:intron | 20.0% |
!!! | TAGATGTTTGATAACTATAT+TGG | + | chr2_1:71922440-71922459 | Msa0222640:intron | 20.0% |
!!! | TTATTGATTATTATTGTTGC+AGG | + | chr2_1:71923332-71923351 | Msa0222640:intron | 20.0% |
!!! | CTTTTTCTATTTCAAAGAAA+GGG | - | chr2_1:71923466-71923485 | None:intergenic | 20.0% |
!! | AGGAACTAAATATTAACATT+TGG | + | chr2_1:71923484-71923503 | Msa0222640:intron | 20.0% |
!! | TAAAAAAAAATGTGAATGAG+AGG | + | chr2_1:71923810-71923829 | Msa0222640:intron | 20.0% |
!!! | GGAAATTTGTTGTTATTATT+TGG | + | chr2_1:71924803-71924822 | Msa0222640:intron | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr2_1:71924924-71924943 | None:intergenic | 20.0% |
!! | AAAGTGGAATATATTGTATT+GGG | - | chr2_1:71925034-71925053 | None:intergenic | 20.0% |
!! | TTTGAGAAAAATACACATAA+TGG | + | chr2_1:71926019-71926038 | Msa0222640:CDS | 20.0% |
!! | CACTAATAAATATCTTTATC+TGG | + | chr2_1:71926681-71926700 | Msa0222640:intron | 20.0% |
!!! | TTTTTACCTTTCTTCTTAAA+AGG | - | chr2_1:71926985-71927004 | None:intergenic | 20.0% |
!! | GGAATAAAAACTAATTACTT+TGG | - | chr2_1:71927024-71927043 | None:intergenic | 20.0% |
!!! | AAGTAATTAGTTTTTATTCC+AGG | + | chr2_1:71927024-71927043 | Msa0222640:exon | 20.0% |
!!! | GATTTTGAAGACTTATGATT+TGG | + | chr2_1:71922191-71922210 | Msa0222640:CDS | 25.0% |
!!! | ATCTCAAATGTTTTTTCTTC+AGG | - | chr2_1:71922303-71922322 | None:intergenic | 25.0% |
! | GCAAATAGATCAATTCAAAT+CGG | - | chr2_1:71922475-71922494 | None:intergenic | 25.0% |
! | TAATGAGTTAGATTGAAATG+TGG | + | chr2_1:71922596-71922615 | Msa0222640:intron | 25.0% |
!! | GTTTTTATAACAGTCTCATT+GGG | - | chr2_1:71922715-71922734 | None:intergenic | 25.0% |
!! | AGTTTTTATAACAGTCTCAT+TGG | - | chr2_1:71922716-71922735 | None:intergenic | 25.0% |
!! | TTGATTTTTGTAAGCTCTTT+AGG | + | chr2_1:71922779-71922798 | Msa0222640:intron | 25.0% |
!!! | TAGATTTTGGAGATGTATAT+TGG | + | chr2_1:71922976-71922995 | Msa0222640:intron | 25.0% |
! | ACCACTTATTTATTCAAACA+CGG | + | chr2_1:71923206-71923225 | Msa0222640:intron | 25.0% |
! | AAAAACACGAAGAACTATTT+AGG | - | chr2_1:71923232-71923251 | None:intergenic | 25.0% |
!! | CCTTTTTCTATTTCAAAGAA+AGG | - | chr2_1:71923467-71923486 | None:intergenic | 25.0% |
!!! | CCTTTCTTTGAAATAGAAAA+AGG | + | chr2_1:71923464-71923483 | Msa0222640:intron | 25.0% |
! | TACGTAATATAAATGTGTAC+TGG | - | chr2_1:71923982-71924001 | None:intergenic | 25.0% |
! | AATTGACTGTGTATACTTTA+TGG | + | chr2_1:71924121-71924140 | Msa0222640:intron | 25.0% |
! | AAAATCTGTATATGCTTGAT+AGG | - | chr2_1:71924249-71924268 | None:intergenic | 25.0% |
! | CAAAATCATAGATCTTATGA+GGG | - | chr2_1:71924625-71924644 | None:intergenic | 25.0% |
! | TCAAAATCATAGATCTTATG+AGG | - | chr2_1:71924626-71924645 | None:intergenic | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr2_1:71924925-71924944 | None:intergenic | 25.0% |
!!! | TGAAATGACTCAGTTATTTT+GGG | - | chr2_1:71924946-71924965 | None:intergenic | 25.0% |
!! | TTGAAATGACTCAGTTATTT+TGG | - | chr2_1:71924947-71924966 | None:intergenic | 25.0% |
! | GAAAGTGGAATATATTGTAT+TGG | - | chr2_1:71925035-71925054 | None:intergenic | 25.0% |
! | TGTATAAATAAAAGGGAAAG+TGG | - | chr2_1:71925050-71925069 | None:intergenic | 25.0% |
! | CTCTATCTTCTCAATTAATA+AGG | + | chr2_1:71925481-71925500 | Msa0222640:CDS | 25.0% |
!!! | TGTTGACTGATTTACATTTT+CGG | - | chr2_1:71925525-71925544 | None:intergenic | 25.0% |
!!! | TGATTTTCTTTTTCAGAAAC+AGG | - | chr2_1:71925872-71925891 | None:intergenic | 25.0% |
! | ACTTTCTCATTAATATTGTG+AGG | - | chr2_1:71926256-71926275 | None:intergenic | 25.0% |
!!! | GCAATTTTAAAATCTTCCTT+TGG | - | chr2_1:71926397-71926416 | None:intergenic | 25.0% |
!! | ACCTTTTGATGAAATGAAAA+CGG | + | chr2_1:71926531-71926550 | Msa0222640:CDS | 25.0% |
! | TTGAAACTATTCAAACTACA+TGG | - | chr2_1:71926753-71926772 | None:intergenic | 25.0% |
! | TTATGTCACAACACTTAAAA+TGG | - | chr2_1:71926866-71926885 | None:intergenic | 25.0% |
!!! | TGTCTATCGATTTTTTATAC+CGG | + | chr2_1:71927089-71927108 | Msa0222640:three_prime_UTR | 25.0% |
ATTTGATTCATGTAGATGAC+TGG | + | chr2_1:71922643-71922662 | Msa0222640:intron | 30.0% | |
! | TTGTTGTTGAACTTATGTAC+TGG | + | chr2_1:71922683-71922702 | Msa0222640:intron | 30.0% |
AATCAACTGAAAAAAGCTCA+CGG | - | chr2_1:71922765-71922784 | None:intergenic | 30.0% | |
ACAACTTAATTGAGAGCTTA+TGG | - | chr2_1:71922912-71922931 | None:intergenic | 30.0% | |
ACAGCTTATGATATGTCAAT+AGG | + | chr2_1:71923087-71923106 | Msa0222640:intron | 30.0% | |
ATAGATTGCTTCAACCTAAA+TGG | - | chr2_1:71923393-71923412 | None:intergenic | 30.0% | |
!! | ATTTAGGTTGAAGCAATCTA+TGG | + | chr2_1:71923392-71923411 | Msa0222640:CDS | 30.0% |
GAAGCAATCTATGGTTAAAA+TGG | + | chr2_1:71923401-71923420 | Msa0222640:CDS | 30.0% | |
TTATTGCTGATGTCCAATTA+AGG | + | chr2_1:71923556-71923575 | Msa0222640:CDS | 30.0% | |
AAATTAACTGCCTCCTTAAT+TGG | - | chr2_1:71923572-71923591 | None:intergenic | 30.0% | |
!! | TGTCTTATTTGTGCAGTTAT+GGG | - | chr2_1:71923877-71923896 | None:intergenic | 30.0% |
!! | TTGTCTTATTTGTGCAGTTA+TGG | - | chr2_1:71923878-71923897 | None:intergenic | 30.0% |
CACAAATAAGACAAGTTTCA+TGG | + | chr2_1:71923884-71923903 | Msa0222640:intron | 30.0% | |
!! | ACTGGTTATTGAAGTTTTGA+GGG | + | chr2_1:71924046-71924065 | Msa0222640:intron | 30.0% |
GTGTTCTTAACAACTAAGAA+AGG | + | chr2_1:71924085-71924104 | Msa0222640:intron | 30.0% | |
TCTTAACAACTAAGAAAGGT+TGG | + | chr2_1:71924089-71924108 | Msa0222640:intron | 30.0% | |
CTTAACAACTAAGAAAGGTT+GGG | + | chr2_1:71924090-71924109 | Msa0222640:intron | 30.0% | |
TTAACAACTAAGAAAGGTTG+GGG | + | chr2_1:71924091-71924110 | Msa0222640:intron | 30.0% | |
GAATCGTGCAATATTAAGAA+TGG | + | chr2_1:71924222-71924241 | Msa0222640:intron | 30.0% | |
AACAAATTTCCAACATCACA+CGG | - | chr2_1:71924794-71924813 | None:intergenic | 30.0% | |
!! | CAGCTATTTCTAAAAACTGT+AGG | + | chr2_1:71924849-71924868 | Msa0222640:intron | 30.0% |
ACTCAAGATATGTTAAACAC+TGG | - | chr2_1:71925158-71925177 | None:intergenic | 30.0% | |
! | AATTTTCCATATCATCCAAC+AGG | - | chr2_1:71925340-71925359 | None:intergenic | 30.0% |
TTGGATGATATGGAAAATTC+TGG | + | chr2_1:71925341-71925360 | Msa0222640:CDS | 30.0% | |
TTGTACTGAAACAAAGTCAA+TGG | - | chr2_1:71925402-71925421 | None:intergenic | 30.0% | |
ATTTATAACCTTGAGATGGA+AGG | - | chr2_1:71925430-71925449 | None:intergenic | 30.0% | |
TGGAATTTATAACCTTGAGA+TGG | - | chr2_1:71925434-71925453 | None:intergenic | 30.0% | |
ATCTCAAGGTTATAAATTCC+AGG | + | chr2_1:71925433-71925452 | Msa0222640:CDS | 30.0% | |
!! | ATTCTATTGATTCAGATGTC+CGG | + | chr2_1:71925753-71925772 | Msa0222640:CDS | 30.0% |
! | AATTTTTGATGCTTCACAAG+AGG | - | chr2_1:71925807-71925826 | None:intergenic | 30.0% |
ATTAATATAACTGTCCACTG+TGG | - | chr2_1:71925837-71925856 | None:intergenic | 30.0% | |
ACAGTGGACAGTTATATTAA+TGG | + | chr2_1:71925836-71925855 | Msa0222640:CDS | 30.0% | |
AAAAGAAAATCAGTCAACAC+TGG | + | chr2_1:71925880-71925899 | Msa0222640:CDS | 30.0% | |
ACATCTGAATCGTTGAAATT+TGG | - | chr2_1:71926112-71926131 | None:intergenic | 30.0% | |
! | AAGTGATTTTGCATCCAATT+GGG | - | chr2_1:71926143-71926162 | None:intergenic | 30.0% |
!! | TCATTTCATCAAAAGGTGTT+TGG | - | chr2_1:71926528-71926547 | None:intergenic | 30.0% |
! | TCCGTTTTCATTTCATCAAA+AGG | - | chr2_1:71926535-71926554 | None:intergenic | 30.0% |
ACATTCATTTCCAGAAGTTA+TGG | + | chr2_1:71926576-71926595 | Msa0222640:CDS | 30.0% | |
! | ATGGTGGAAGATAAAAAGTT+TGG | + | chr2_1:71926595-71926614 | Msa0222640:CDS | 30.0% |
CTTCCATCACAAGTAAATAA+CGG | + | chr2_1:71926776-71926795 | Msa0222640:intron | 30.0% | |
TATCCGTTATTTACTTGTGA+TGG | - | chr2_1:71926782-71926801 | None:intergenic | 30.0% | |
TGCAAGTAACAATAATAACC+TGG | - | chr2_1:71927045-71927064 | None:intergenic | 30.0% | |
GGTTATTTAGTCCAAACTTA+GGG | + | chr2_1:71927137-71927156 | Msa0222640:three_prime_UTR | 30.0% | |
!! | GATTTAGAAGGTTTTGTGGT+GGG | - | chr2_1:71921880-71921899 | None:intergenic | 35.0% |
!!! | TTTTCGATGGTGGATTTAGA+AGG | - | chr2_1:71921892-71921911 | None:intergenic | 35.0% |
GCTGTTAAAGCAATGGAATT+AGG | + | chr2_1:71921928-71921947 | Msa0222640:CDS | 35.0% | |
! | CAAAGCATTCTCAACACAAA+CGG | - | chr2_1:71922142-71922161 | None:intergenic | 35.0% |
TCAAACGCATTCTGATTCAA+CGG | - | chr2_1:71922228-71922247 | None:intergenic | 35.0% | |
TTCTTCAGGATCAATCAGTA+AGG | - | chr2_1:71922289-71922308 | None:intergenic | 35.0% | |
TAAGGAGAGTAGATCAATGT+AGG | + | chr2_1:71922522-71922541 | Msa0222640:intron | 35.0% | |
TTCATGTAGATGACTGGATA+AGG | + | chr2_1:71922649-71922668 | Msa0222640:intron | 35.0% | |
TATGAGTTATGACATCGACA+TGG | + | chr2_1:71922739-71922758 | Msa0222640:intron | 35.0% | |
TAAATGCCCATACGAAAACA+CGG | - | chr2_1:71922958-71922977 | None:intergenic | 35.0% | |
! | TCGTATGGGCATTTAGATTT+TGG | + | chr2_1:71922963-71922982 | Msa0222640:intron | 35.0% |
GCCGTGTTTGAATAAATAAG+TGG | - | chr2_1:71923210-71923229 | None:intergenic | 35.0% | |
! | TTTCAGCTAAGTTGCCATTT+AGG | + | chr2_1:71923376-71923395 | Msa0222640:CDS | 35.0% |
!!! | GTTTTTGAGGTTTCATACTC+TGG | + | chr2_1:71923531-71923550 | Msa0222640:CDS | 35.0% |
CAGTTATGGGGTCAATATAT+GGG | - | chr2_1:71923864-71923883 | None:intergenic | 35.0% | |
!! | GTCTTATTTGTGCAGTTATG+GGG | - | chr2_1:71923876-71923895 | None:intergenic | 35.0% |
ATAAGACAAGTTTCATGGAC+AGG | + | chr2_1:71923889-71923908 | Msa0222640:intron | 35.0% | |
GTATCTTTATTAATGCGAGC+TGG | + | chr2_1:71923999-71924018 | Msa0222640:intron | 35.0% | |
TATATGTCTTGAAGTCTGAC+TGG | + | chr2_1:71924028-71924047 | Msa0222640:intron | 35.0% | |
!! | GACTGGTTATTGAAGTTTTG+AGG | + | chr2_1:71924045-71924064 | Msa0222640:intron | 35.0% |
TAACAACTAAGAAAGGTTGG+GGG | + | chr2_1:71924092-71924111 | Msa0222640:intron | 35.0% | |
AACTTATTCAAACCAGTGCT+TGG | + | chr2_1:71924296-71924315 | Msa0222640:intron | 35.0% | |
GAAATTGAAATCCAGGAACA+GGG | - | chr2_1:71924561-71924580 | None:intergenic | 35.0% | |
CTAACAGGAAATTGAAATCC+AGG | - | chr2_1:71924568-71924587 | None:intergenic | 35.0% | |
TTTCAATTTCCTGTTAGAGC+AGG | + | chr2_1:71924571-71924590 | Msa0222640:intron | 35.0% | |
GACAACCTTGTATGTAGTTA+CGG | + | chr2_1:71924644-71924663 | Msa0222640:intron | 35.0% | |
TGTAACCGTAACTACATACA+AGG | - | chr2_1:71924652-71924671 | None:intergenic | 35.0% | |
AGAAAATGGGTCAGATATTC+CGG | - | chr2_1:71924911-71924930 | None:intergenic | 35.0% | |
ATCTTGAGTGACATTCTGAA+TGG | + | chr2_1:71925169-71925188 | Msa0222640:intron | 35.0% | |
! | TTCTTTTAGCCAATGCTCTA+AGG | + | chr2_1:71925201-71925220 | Msa0222640:CDS | 35.0% |
GAGAAAGCGATTTCATAAAG+AGG | + | chr2_1:71925223-71925242 | Msa0222640:CDS | 35.0% | |
ATTCTCAAGAGTTGCTAAAG+TGG | + | chr2_1:71925285-71925304 | Msa0222640:CDS | 35.0% | |
TTCTCAAGAGTTGCTAAAGT+GGG | + | chr2_1:71925286-71925305 | Msa0222640:CDS | 35.0% | |
TGATATCCTGTTGGATGATA+TGG | + | chr2_1:71925331-71925350 | Msa0222640:CDS | 35.0% | |
! | TGATTTACATTTTCGGCAAC+AGG | - | chr2_1:71925518-71925537 | None:intergenic | 35.0% |
AAACATCACATTGTGAGATG+TGG | + | chr2_1:71925632-71925651 | Msa0222640:CDS | 35.0% | |
ATTTGGAAGTCCTAACTTTG+TGG | - | chr2_1:71926095-71926114 | None:intergenic | 35.0% | |
! | CAAGTGATTTTGCATCCAAT+TGG | - | chr2_1:71926144-71926163 | None:intergenic | 35.0% |
TGAGGATCAACTGAAGATTT+AGG | - | chr2_1:71926238-71926257 | None:intergenic | 35.0% | |
GAAATTTCTACACCATCCAT+AGG | + | chr2_1:71926277-71926296 | Msa0222640:CDS | 35.0% | |
GATGCATGAAAATTTGCCAA+AGG | + | chr2_1:71926378-71926397 | Msa0222640:CDS | 35.0% | |
TAAAATTGCTGAGCATACAG+TGG | + | chr2_1:71926408-71926427 | Msa0222640:CDS | 35.0% | |
ATCTACTTCTGTAACATCAG+TGG | + | chr2_1:71926444-71926463 | Msa0222640:CDS | 35.0% | |
TTCATTTCCAGAAGTTATGG+TGG | + | chr2_1:71926579-71926598 | Msa0222640:CDS | 35.0% | |
TTATCTTCCACCATAACTTC+TGG | - | chr2_1:71926589-71926608 | None:intergenic | 35.0% | |
! | CGTTATTTACTTGTGATGGA+AGG | - | chr2_1:71926778-71926797 | None:intergenic | 35.0% |
TGTGCATTTGCATTATATCC+AGG | + | chr2_1:71926895-71926914 | Msa0222640:intron | 35.0% | |
! | CAGTTTTCTTTCCATTGAAG+CGG | + | chr2_1:71926944-71926963 | Msa0222640:CDS | 35.0% |
ATATGAAACAACCGCTTCAA+TGG | - | chr2_1:71926958-71926977 | None:intergenic | 35.0% | |
! | ATTGAAGCGGTTGTTTCATA+TGG | + | chr2_1:71926957-71926976 | Msa0222640:CDS | 35.0% |
!! | ATGGTGCCTTTTAAGAAGAA+AGG | + | chr2_1:71926976-71926995 | Msa0222640:CDS | 35.0% |
GGGTTATTTAGTCCAAACTT+AGG | + | chr2_1:71927136-71927155 | Msa0222640:three_prime_UTR | 35.0% | |
AACACACACAAACAATTGGA+TGG | + | chr2_1:71927161-71927180 | Msa0222640:three_prime_UTR | 35.0% | |
TCGAAGAAACCCATTGTTGA+CGG | - | chr2_1:71921835-71921854 | None:intergenic | 40.0% | |
GTGAAGGGTAAGGTATGTTT+AGG | - | chr2_1:71921858-71921877 | None:intergenic | 40.0% | |
!! | GGATTTAGAAGGTTTTGTGG+TGG | - | chr2_1:71921881-71921900 | None:intergenic | 40.0% |
!! | GGTGGATTTAGAAGGTTTTG+TGG | - | chr2_1:71921884-71921903 | None:intergenic | 40.0% |
ATTCCATTGCTTTAACAGCG+AGG | - | chr2_1:71921927-71921946 | None:intergenic | 40.0% | |
GCAATGGAATTAGGTTACAC+AGG | + | chr2_1:71921937-71921956 | Msa0222640:CDS | 40.0% | |
GATTGAGCAACGATGGTTAT+CGG | - | chr2_1:71921998-71922017 | None:intergenic | 40.0% | |
TTGTGTTGAGAATGCTTTGC+AGG | + | chr2_1:71922143-71922162 | Msa0222640:CDS | 40.0% | |
! | TGATGTTGCTTGTGAGAGAA+TGG | + | chr2_1:71922245-71922264 | Msa0222640:CDS | 40.0% |
TAGGATAGTCAGATCACTAG+AGG | + | chr2_1:71922541-71922560 | Msa0222640:intron | 40.0% | |
! | TAGTTCTCCGTGTTTTCGTA+TGG | + | chr2_1:71922948-71922967 | Msa0222640:intron | 40.0% |
! | AGTTCTCCGTGTTTTCGTAT+GGG | + | chr2_1:71922949-71922968 | Msa0222640:intron | 40.0% |
TATGGTTAAAATGGCTACCC+AGG | + | chr2_1:71923410-71923429 | Msa0222640:CDS | 40.0% | |
TGGCTTATTAATACACAGCG+TGG | + | chr2_1:71923504-71923523 | Msa0222640:intron | 40.0% | |
TTGCTGATGTCCAATTAAGG+AGG | + | chr2_1:71923559-71923578 | Msa0222640:CDS | 40.0% | |
GCAGTTAATTTCCAATGCCA+AGG | + | chr2_1:71923581-71923600 | Msa0222640:CDS | 40.0% | |
GCAGTTATGGGGTCAATATA+TGG | - | chr2_1:71923865-71923884 | None:intergenic | 40.0% | |
TGTTGCGCAAGCTTACTATA+CGG | - | chr2_1:71923929-71923948 | None:intergenic | 40.0% | |
AAGCTTGCGCAACAGAATAT+TGG | + | chr2_1:71923935-71923954 | Msa0222640:intron | 40.0% | |
AACAACTAAGAAAGGTTGGG+GGG | + | chr2_1:71924093-71924112 | Msa0222640:intron | 40.0% | |
TATGGAATCCCTACTGATGA+AGG | + | chr2_1:71924139-71924158 | Msa0222640:intron | 40.0% | |
ATGGAATCCCTACTGATGAA+GGG | + | chr2_1:71924140-71924159 | Msa0222640:intron | 40.0% | |
ACCTTCCGTGTTTATAAGCA+GGG | + | chr2_1:71924179-71924198 | Msa0222640:intron | 40.0% | |
TGGATCCCTGCTTATAAACA+CGG | - | chr2_1:71924187-71924206 | None:intergenic | 40.0% | |
TATAAGCAGGGATCCAGTAT+AGG | + | chr2_1:71924191-71924210 | Msa0222640:intron | 40.0% | |
GATTCCTAATCAGCCTATAC+TGG | - | chr2_1:71924207-71924226 | None:intergenic | 40.0% | |
!!! | GATTTTAACTAACCAGCGCT+AGG | + | chr2_1:71924263-71924282 | Msa0222640:intron | 40.0% |
TAAAGAGATTCCTTGCGAAC+TGG | + | chr2_1:71924412-71924431 | Msa0222640:intron | 40.0% | |
AAATCCAGGAACAGGGTAAT+GGG | - | chr2_1:71924554-71924573 | None:intergenic | 40.0% | |
GGAAATTGAAATCCAGGAAC+AGG | - | chr2_1:71924562-71924581 | None:intergenic | 40.0% | |
TCATAGATCTTATGAGGGTC+AGG | - | chr2_1:71924620-71924639 | None:intergenic | 40.0% | |
! | ACATGTAGCTGTTGATTGAC+TGG | + | chr2_1:71924708-71924727 | Msa0222640:intron | 40.0% |
!!! | ATTTTCAAGTGCTGCTCCTT+CGG | + | chr2_1:71924751-71924770 | Msa0222640:CDS | 40.0% |
CTTCGGTGAATGAACTTAGA+GGG | + | chr2_1:71924768-71924787 | Msa0222640:CDS | 40.0% | |
ATTATTTGGGCTCTCCAAAG+AGG | + | chr2_1:71924817-71924836 | Msa0222640:intron | 40.0% | |
! | AGCTGATTTAGCTTCCTCTT+TGG | - | chr2_1:71924834-71924853 | None:intergenic | 40.0% |
GAAAATGGGTCAGATATTCC+GGG | - | chr2_1:71924910-71924929 | None:intergenic | 40.0% | |
AATCTGTGTGAAATGAGCCA+AGG | + | chr2_1:71925078-71925097 | Msa0222640:intron | 40.0% | |
ATCTGTGTGAAATGAGCCAA+GGG | + | chr2_1:71925079-71925098 | Msa0222640:intron | 40.0% | |
AGCCAAGGGGTCAAATAAAT+TGG | + | chr2_1:71925093-71925112 | Msa0222640:intron | 40.0% | |
GCCAAGGGGTCAAATAAATT+GGG | + | chr2_1:71925094-71925113 | Msa0222640:intron | 40.0% | |
TCCCAATTTATTTGACCCCT+TGG | - | chr2_1:71925098-71925117 | None:intergenic | 40.0% | |
AGGGGTCAAATAAATTGGGA+CGG | + | chr2_1:71925098-71925117 | Msa0222640:intron | 40.0% | |
GTCAAATAAATTGGGACGGA+GGG | + | chr2_1:71925102-71925121 | Msa0222640:intron | 40.0% | |
!!! | GGAGTAGTGTTTTGGTTCTA+GGG | + | chr2_1:71925123-71925142 | Msa0222640:intron | 40.0% |
! | TGACATTCTGAATGGCTTGT+AGG | + | chr2_1:71925177-71925196 | Msa0222640:intron | 40.0% |
! | GACATTCTGAATGGCTTGTA+GGG | + | chr2_1:71925178-71925197 | Msa0222640:intron | 40.0% |
AGTCTTTGATGCTTTACAGG+AGG | - | chr2_1:71925372-71925391 | None:intergenic | 40.0% | |
TGCAGTCTTTGATGCTTTAC+AGG | - | chr2_1:71925375-71925394 | None:intergenic | 40.0% | |
CATTTGCAGGTAAGAAATCC+TGG | - | chr2_1:71925454-71925473 | None:intergenic | 40.0% | |
!! | ATAGAGAGAGTGTCATTTGC+AGG | - | chr2_1:71925467-71925486 | None:intergenic | 40.0% |
! | TCAGTTAAGTTGTTGGGTAC+AGG | - | chr2_1:71925548-71925567 | None:intergenic | 40.0% |
GATGATCTATCGTCTTGCTT+TGG | - | chr2_1:71925596-71925615 | None:intergenic | 40.0% | |
GCAAGACGATAGATCATCAT+TGG | + | chr2_1:71925598-71925617 | Msa0222640:CDS | 40.0% | |
GACGATAGATCATCATTGGA+TGG | + | chr2_1:71925602-71925621 | Msa0222640:CDS | 40.0% | |
TCTGAGAAAAACGTACACAG+CGG | + | chr2_1:71925662-71925681 | Msa0222640:CDS | 40.0% | |
GAGATAGACACTGAGACAAA+TGG | + | chr2_1:71925710-71925729 | Msa0222640:CDS | 40.0% | |
!! | TATTGATTCAGATGTCCGGA+TGG | + | chr2_1:71925757-71925776 | Msa0222640:CDS | 40.0% |
AAAAATTGCGAAAGCCACAG+TGG | + | chr2_1:71925820-71925839 | Msa0222640:CDS | 40.0% | |
! | GACTGCTTGGTTAAGTTGTT+AGG | - | chr2_1:71925908-71925927 | None:intergenic | 40.0% |
TTTCTCTTGCGCAAGATGAA+AGG | + | chr2_1:71925942-71925961 | Msa0222640:CDS | 40.0% | |
CTGACAAATGCCACAAAGTT+AGG | + | chr2_1:71926082-71926101 | Msa0222640:CDS | 40.0% | |
! | AGATGTTGATTGCACCCAAT+TGG | + | chr2_1:71926126-71926145 | Msa0222640:CDS | 40.0% |
GTGCATCTCAAGTAATGTGT+TGG | + | chr2_1:71926180-71926199 | Msa0222640:CDS | 40.0% | |
!!! | ATCCATAGGCGTCATTTTTC+CGG | + | chr2_1:71926291-71926310 | Msa0222640:CDS | 40.0% |
TACTTCTGTAACATCAGTGG+AGG | + | chr2_1:71926447-71926466 | Msa0222640:CDS | 40.0% | |
ACTTCAACTGCATCAGTTTC+TGG | - | chr2_1:71926490-71926509 | None:intergenic | 40.0% | |
!! | TCATCAAAAGGTGTTTGGTC+AGG | - | chr2_1:71926523-71926542 | None:intergenic | 40.0% |
CGCTTCAATGGAAAGAAAAC+TGG | - | chr2_1:71926946-71926965 | None:intergenic | 40.0% | |
AATAACCCATCGAGCTTTCA+GGG | - | chr2_1:71927124-71927143 | None:intergenic | 40.0% | |
AAATAACCCATCGAGCTTTC+AGG | - | chr2_1:71927125-71927144 | None:intergenic | 40.0% | |
TGTGTGTGTTTCCCTAAGTT+TGG | - | chr2_1:71927151-71927170 | None:intergenic | 40.0% | |
GGGAAACACACACAAACAAT+TGG | + | chr2_1:71927157-71927176 | Msa0222640:three_prime_UTR | 40.0% | |
AACCCTCAACTCTTAAACCC+TGG | + | chr2_1:71921780-71921799 | Msa0222640:five_prime_UTR | 45.0% | |
CACCAGGGTTTAAGAGTTGA+GGG | - | chr2_1:71921785-71921804 | None:intergenic | 45.0% | |
AAGAAACCCATTGTTGACGG+CGG | - | chr2_1:71921832-71921851 | None:intergenic | 45.0% | |
!!! | AAGGTTTTGTGGTGGGTGAA+GGG | - | chr2_1:71921873-71921892 | None:intergenic | 45.0% |
ACATTACGCCTTTCATCGTG+CGG | - | chr2_1:71921975-71921994 | None:intergenic | 45.0% | |
GAGAGAAGAGAGAGAAAGTG+GGG | - | chr2_1:71922022-71922041 | None:intergenic | 45.0% | |
GGAGAGAAGAGAGAGAAAGT+GGG | - | chr2_1:71922023-71922042 | None:intergenic | 45.0% | |
AGGAGAGAAGAGAGAGAAAG+TGG | - | chr2_1:71922024-71922043 | None:intergenic | 45.0% | |
CAAGAAACGGAACGACATTG+AGG | - | chr2_1:71922044-71922063 | None:intergenic | 45.0% | |
TTTCGGCTTCTACTCCGTTT+CGG | + | chr2_1:71922100-71922119 | Msa0222640:CDS | 45.0% | |
! | TGTTGCTTGTGAGAGAATGG+CGG | + | chr2_1:71922248-71922267 | Msa0222640:CDS | 45.0% |
AAGAGAAGACCTGCTCAGTA+AGG | + | chr2_1:71922504-71922523 | Msa0222640:intron | 45.0% | |
ATCTACTCTCCTTACTGAGC+AGG | - | chr2_1:71922516-71922535 | None:intergenic | 45.0% | |
GAACACTCAAGAGCAAACCT+GGG | - | chr2_1:71923430-71923449 | None:intergenic | 45.0% | |
AGAACACTCAAGAGCAAACC+TGG | - | chr2_1:71923431-71923450 | None:intergenic | 45.0% | |
GCAGCTATTTACCTTGGCAT+TGG | - | chr2_1:71923595-71923614 | None:intergenic | 45.0% | |
AGGGAAGCAGCTATTTACCT+TGG | - | chr2_1:71923601-71923620 | None:intergenic | 45.0% | |
AGTTTCATGGACAGGTGCAT+AGG | + | chr2_1:71923897-71923916 | Msa0222640:intron | 45.0% | |
TGGAATCCCTACTGATGAAG+GGG | + | chr2_1:71924141-71924160 | Msa0222640:intron | 45.0% | |
CACCTTCCGTGTTTATAAGC+AGG | + | chr2_1:71924178-71924197 | Msa0222640:intron | 45.0% | |
TCCCTGCTTATAAACACGGA+AGG | - | chr2_1:71924183-71924202 | None:intergenic | 45.0% | |
GGATCCAGTATAGGCTGATT+AGG | + | chr2_1:71924200-71924219 | Msa0222640:intron | 45.0% | |
CTGTTAGCATGCATGACCAT+GGG | + | chr2_1:71924386-71924405 | Msa0222640:intron | 45.0% | |
TGTTAGCATGCATGACCATG+GGG | + | chr2_1:71924387-71924406 | Msa0222640:intron | 45.0% | |
! | TTGATTCGTTCCAGTTCGCA+AGG | - | chr2_1:71924425-71924444 | None:intergenic | 45.0% |
GAAATCCAGGAACAGGGTAA+TGG | - | chr2_1:71924555-71924574 | None:intergenic | 45.0% | |
AGATGAGATCCTGCTCTAAC+AGG | - | chr2_1:71924583-71924602 | None:intergenic | 45.0% | |
TAGATCTTATGAGGGTCAGG+AGG | - | chr2_1:71924617-71924636 | None:intergenic | 45.0% | |
CCTCTAAGTTCATTCACCGA+AGG | - | chr2_1:71924770-71924789 | None:intergenic | 45.0% | |
CCTTCGGTGAATGAACTTAG+AGG | + | chr2_1:71924767-71924786 | Msa0222640:CDS | 45.0% | |
TCTGTGTGAAATGAGCCAAG+GGG | + | chr2_1:71925080-71925099 | Msa0222640:intron | 45.0% | |
GGTCAAATAAATTGGGACGG+AGG | + | chr2_1:71925101-71925120 | Msa0222640:intron | 45.0% | |
!!! | GGGAGTAGTGTTTTGGTTCT+AGG | + | chr2_1:71925122-71925141 | Msa0222640:intron | 45.0% |
!!! | TTTTGGTTCTAGGGACCACT+GGG | + | chr2_1:71925132-71925151 | Msa0222640:intron | 45.0% |
TATGTTAAACACTGGCCCAG+TGG | - | chr2_1:71925150-71925169 | None:intergenic | 45.0% | |
TCGCTTTCTCCTTAGAGCAT+TGG | - | chr2_1:71925213-71925232 | None:intergenic | 45.0% | |
! | GGCTGCTCAGTTAAGTTGTT+GGG | - | chr2_1:71925554-71925573 | None:intergenic | 45.0% |
GGACAAACATCAGTCCTGTT+GGG | - | chr2_1:71925575-71925594 | None:intergenic | 45.0% | |
TGGACAAACATCAGTCCTGT+TGG | - | chr2_1:71925576-71925595 | None:intergenic | 45.0% | |
TGAGACAAATGGTGCGAAGT+TGG | + | chr2_1:71925721-71925740 | Msa0222640:CDS | 45.0% | |
! | ACTTTTCTACGTCGTCCATC+CGG | - | chr2_1:71925775-71925794 | None:intergenic | 45.0% |
AAGAGAAATGTGGAGCCTGT+CGG | - | chr2_1:71925930-71925949 | None:intergenic | 45.0% | |
CATCTTGCGCAAGAGAAATG+TGG | - | chr2_1:71925940-71925959 | None:intergenic | 45.0% | |
!!! | GGCTGTTTTTCGTTCTCATG+TGG | - | chr2_1:71926217-71926236 | None:intergenic | 45.0% |
GGAAAAATGACGCCTATGGA+TGG | - | chr2_1:71926292-71926311 | None:intergenic | 45.0% | |
TGCTTTGCATGTTCTGTAGC+CGG | - | chr2_1:71926313-71926332 | None:intergenic | 45.0% | |
AATTGCTGAGCATACAGTGG+TGG | + | chr2_1:71926411-71926430 | Msa0222640:CDS | 45.0% | |
TCTGTAACATCAGTGGAGGA+TGG | + | chr2_1:71926451-71926470 | Msa0222640:CDS | 45.0% | |
! | AACTACATGGACTGCTGAGA+GGG | - | chr2_1:71926740-71926759 | None:intergenic | 45.0% |
! | AAACTACATGGACTGCTGAG+AGG | - | chr2_1:71926741-71926760 | None:intergenic | 45.0% |
GCTTTCAGGGTTGAAGAAAC+CGG | - | chr2_1:71927111-71927130 | None:intergenic | 45.0% | |
TTCAACCCTGAAAGCTCGAT+GGG | + | chr2_1:71927116-71927135 | Msa0222640:three_prime_UTR | 45.0% | |
CCACCAGGGTTTAAGAGTTG+AGG | - | chr2_1:71921786-71921805 | None:intergenic | 50.0% | |
CCTCAACTCTTAAACCCTGG+TGG | + | chr2_1:71921783-71921802 | Msa0222640:five_prime_UTR | 50.0% | |
ATTCCACCGCCGTCAACAAT+GGG | + | chr2_1:71921823-71921842 | Msa0222640:exon | 50.0% | |
!! | TTTGTGGTGGGTGAAGGGTA+AGG | - | chr2_1:71921868-71921887 | None:intergenic | 50.0% |
!!! | GAAGGTTTTGTGGTGGGTGA+AGG | - | chr2_1:71921874-71921893 | None:intergenic | 50.0% |
!! | CGTTCGGTTGTTTTCGATGG+TGG | - | chr2_1:71921902-71921921 | None:intergenic | 50.0% |
GCTTACAACCGCACGATGAA+AGG | + | chr2_1:71921964-71921983 | Msa0222640:CDS | 50.0% | |
AAGCTTCATCGGGAGCTTCT+TGG | + | chr2_1:71922075-71922094 | Msa0222640:CDS | 50.0% | |
TCGGGAGCTTCTTGGAGTTT+CGG | + | chr2_1:71922083-71922102 | Msa0222640:CDS | 50.0% | |
ATCCTCGTGTACTGCCGAAA+CGG | - | chr2_1:71922117-71922136 | None:intergenic | 50.0% | |
! | GCAGGCGAATGCTTTGAATG+CGG | + | chr2_1:71922161-71922180 | Msa0222640:CDS | 50.0% |
! | CAGGCGAATGCTTTGAATGC+GGG | + | chr2_1:71922162-71922181 | Msa0222640:CDS | 50.0% |
! | AGGCGAATGCTTTGAATGCG+GGG | + | chr2_1:71922163-71922182 | Msa0222640:CDS | 50.0% |
!!! | ACAGCGTGGCGTTGTTTTTG+AGG | + | chr2_1:71923518-71923537 | Msa0222640:intron | 50.0% |
GCACATCCCCTTCATCAGTA+GGG | - | chr2_1:71924150-71924169 | None:intergenic | 50.0% | |
TTGCATATAGAGCCTAGCGC+TGG | - | chr2_1:71924278-71924297 | None:intergenic | 50.0% | |
TTGCATACAGAGCCAAGCAC+TGG | - | chr2_1:71924311-71924330 | None:intergenic | 50.0% | |
GCTGTTAGCATGCATGACCA+TGG | + | chr2_1:71924385-71924404 | Msa0222640:intron | 50.0% | |
GTTAGCATGCATGACCATGG+GGG | + | chr2_1:71924388-71924407 | Msa0222640:intron | 50.0% | |
TTAGCATGCATGACCATGGG+GGG | + | chr2_1:71924389-71924408 | Msa0222640:intron | 50.0% | |
AGGAATCTCTTTACCCCCCA+TGG | - | chr2_1:71924405-71924424 | None:intergenic | 50.0% | |
TGTTCCCATTACCCTGTTCC+TGG | + | chr2_1:71924547-71924566 | Msa0222640:intron | 50.0% | |
ATGAGGGTCAGGAGGTCTAA+TGG | - | chr2_1:71924609-71924628 | None:intergenic | 50.0% | |
! | CTGTTGATTGACTGGACTCG+TGG | + | chr2_1:71924716-71924735 | Msa0222640:CDS | 50.0% |
ATGGGTCAGATATTCCGGGA+CGG | - | chr2_1:71924906-71924925 | None:intergenic | 50.0% | |
!!! | GTTTTGGTTCTAGGGACCAC+TGG | + | chr2_1:71925131-71925150 | Msa0222640:intron | 50.0% |
TGGGGAAGGTGATATCCTGT+TGG | + | chr2_1:71925322-71925341 | Msa0222640:CDS | 50.0% | |
CAAGACAGCCTTCCATCTCA+AGG | + | chr2_1:71925419-71925438 | Msa0222640:CDS | 50.0% | |
! | GGGCTGCTCAGTTAAGTTGT+TGG | - | chr2_1:71925555-71925574 | None:intergenic | 50.0% |
ACTTAACTGAGCAGCCCAAC+AGG | + | chr2_1:71925558-71925577 | Msa0222640:CDS | 50.0% | |
ACTTAACCAAGCAGTCCGAC+AGG | + | chr2_1:71925912-71925931 | Msa0222640:CDS | 50.0% | |
AGCCGGAAAAATGACGCCTA+TGG | - | chr2_1:71926296-71926315 | None:intergenic | 50.0% | |
ACCTGAGACAGACTGAACAG+AGG | - | chr2_1:71926650-71926669 | None:intergenic | 50.0% | |
! | ATGGACTGCTGAGAGGGAAA+TGG | - | chr2_1:71926734-71926753 | None:intergenic | 50.0% |
GTAGACGATGTGCGCTTGTA+GGG | - | chr2_1:71926833-71926852 | None:intergenic | 50.0% | |
AGTAGACGATGTGCGCTTGT+AGG | - | chr2_1:71926834-71926853 | None:intergenic | 50.0% | |
ATCCAGGTCGATTGCGAGTT+AGG | + | chr2_1:71926911-71926930 | Msa0222640:intron | 50.0% | |
CTTCAACCCTGAAAGCTCGA+TGG | + | chr2_1:71927115-71927134 | Msa0222640:three_prime_UTR | 50.0% | |
! | TTAAACCCTGGTGGCGCAAG+CGG | + | chr2_1:71921792-71921811 | Msa0222640:five_prime_UTR | 55.0% |
TTGTTGACGGCGGTGGAATC+AGG | - | chr2_1:71921822-71921841 | None:intergenic | 55.0% | |
GATTCCACCGCCGTCAACAA+TGG | + | chr2_1:71921822-71921841 | Msa0222640:exon | 55.0% | |
AAACCCATTGTTGACGGCGG+TGG | - | chr2_1:71921829-71921848 | None:intergenic | 55.0% | |
!! | GCGCGTTCGGTTGTTTTCGA+TGG | - | chr2_1:71921905-71921924 | None:intergenic | 55.0% |
CTTTAACAGCGAGGCGCGTT+CGG | - | chr2_1:71921918-71921937 | None:intergenic | 55.0% | |
GCGCCTCGCTGTTAAAGCAA+TGG | + | chr2_1:71921921-71921940 | Msa0222640:CDS | 55.0% | |
GTGGGGAGATTGAGCAACGA+TGG | - | chr2_1:71922005-71922024 | None:intergenic | 55.0% | |
CGTTCCGTTTCTTGCGTCGT+CGG | + | chr2_1:71922050-71922069 | Msa0222640:CDS | 55.0% | |
TTCGCCGACGACGCAAGAAA+CGG | - | chr2_1:71922057-71922076 | None:intergenic | 55.0% | |
CGCACATCCCCTTCATCAGT+AGG | - | chr2_1:71924151-71924170 | None:intergenic | 55.0% | |
ACTGATGAAGGGGATGTGCG+CGG | + | chr2_1:71924151-71924170 | Msa0222640:intron | 55.0% | |
CTTAGAGGGCCGTGTGATGT+TGG | + | chr2_1:71924782-71924801 | Msa0222640:CDS | 55.0% | |
CCTTTATACTCCCTCCGTCC+CGG | + | chr2_1:71924889-71924908 | Msa0222640:intron | 55.0% | |
GTCAGATATTCCGGGACGGA+GGG | - | chr2_1:71924902-71924921 | None:intergenic | 55.0% | |
! | GGACGGAGGGAGTAGTGTTT+TGG | + | chr2_1:71925115-71925134 | Msa0222640:intron | 55.0% |
CAGGATATCACCTTCCCCAC+TGG | - | chr2_1:71925321-71925340 | None:intergenic | 55.0% | |
GCCTCTGTTCAGTCTGTCTC+AGG | + | chr2_1:71926646-71926665 | Msa0222640:CDS | 55.0% | |
CGTCGTCGGCGAAGCTTCAT+CGG | + | chr2_1:71922064-71922083 | Msa0222640:CDS | 60.0% | |
GTCGTCGGCGAAGCTTCATC+GGG | + | chr2_1:71922065-71922084 | Msa0222640:CDS | 60.0% | |
CTCCGTTTCGGCAGTACACG+AGG | + | chr2_1:71922112-71922131 | Msa0222640:CDS | 60.0% | |
CTGATGAAGGGGATGTGCGC+GGG | + | chr2_1:71924152-71924171 | Msa0222640:intron | 60.0% | |
! | CCGGGACGGAGGGAGTATAA+AGG | - | chr2_1:71924892-71924911 | None:intergenic | 60.0% |
GGTCAGATATTCCGGGACGG+AGG | - | chr2_1:71924903-71924922 | None:intergenic | 60.0% | |
AAGTGGGACCCTCTCTCCAG+TGG | + | chr2_1:71925302-71925321 | Msa0222640:CDS | 60.0% | |
AGTGGGACCCTCTCTCCAGT+GGG | + | chr2_1:71925303-71925322 | Msa0222640:CDS | 60.0% | |
CACCTTCCCCACTGGAGAGA+GGG | - | chr2_1:71925313-71925332 | None:intergenic | 60.0% | |
TCACCTTCCCCACTGGAGAG+AGG | - | chr2_1:71925314-71925333 | None:intergenic | 60.0% | |
CGCCTAACTCGCAATCGACC+TGG | - | chr2_1:71926916-71926935 | None:intergenic | 60.0% | |
! | GTTTGCCGCTTGCGCCACCA+GGG | - | chr2_1:71921800-71921819 | None:intergenic | 65.0% |
GTGGGACCCTCTCTCCAGTG+GGG | + | chr2_1:71925304-71925323 | Msa0222640:CDS | 65.0% | |
GACCCTCTCTCCAGTGGGGA+AGG | + | chr2_1:71925308-71925327 | Msa0222640:CDS | 65.0% | |
GTGGAGCCTGTCGGACTGCT+TGG | - | chr2_1:71925921-71925940 | None:intergenic | 65.0% | |
! | GGTTTGCCGCTTGCGCCACC+AGG | - | chr2_1:71921801-71921820 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 71921749 | 71927200 | 71921749 | ID=Msa0222640;Name=Msa0222640 |
chr2_1 | mRNA | 71921749 | 71927200 | 71921749 | ID=Msa0222640-mRNA-1;Parent=Msa0222640;Name=Msa0222640-mRNA-1;_AED=0.04;_eAED=0.04;_QI=92|0.8|0.83|1|1|1|6|171|755 |
chr2_1 | exon | 71921749 | 71922269 | 71921749 | ID=Msa0222640-mRNA-1:exon:20752;Parent=Msa0222640-mRNA-1 |
chr2_1 | exon | 71923354 | 71923431 | 71923354 | ID=Msa0222640-mRNA-1:exon:20753;Parent=Msa0222640-mRNA-1 |
chr2_1 | exon | 71923522 | 71923602 | 71923522 | ID=Msa0222640-mRNA-1:exon:20754;Parent=Msa0222640-mRNA-1 |
chr2_1 | exon | 71924716 | 71924813 | 71924716 | ID=Msa0222640-mRNA-1:exon:20755;Parent=Msa0222640-mRNA-1 |
chr2_1 | exon | 71925199 | 71926667 | 71925199 | ID=Msa0222640-mRNA-1:exon:20756;Parent=Msa0222640-mRNA-1 |
chr2_1 | exon | 71926917 | 71927200 | 71926917 | ID=Msa0222640-mRNA-1:exon:20757;Parent=Msa0222640-mRNA-1 |
chr2_1 | five_prime_UTR | 71921749 | 71921840 | 71921749 | ID=Msa0222640-mRNA-1:five_prime_utr;Parent=Msa0222640-mRNA-1 |
chr2_1 | CDS | 71921841 | 71922269 | 71921841 | ID=Msa0222640-mRNA-1:cds;Parent=Msa0222640-mRNA-1 |
chr2_1 | CDS | 71923354 | 71923431 | 71923354 | ID=Msa0222640-mRNA-1:cds;Parent=Msa0222640-mRNA-1 |
chr2_1 | CDS | 71923522 | 71923602 | 71923522 | ID=Msa0222640-mRNA-1:cds;Parent=Msa0222640-mRNA-1 |
chr2_1 | CDS | 71924716 | 71924813 | 71924716 | ID=Msa0222640-mRNA-1:cds;Parent=Msa0222640-mRNA-1 |
chr2_1 | CDS | 71925199 | 71926667 | 71925199 | ID=Msa0222640-mRNA-1:cds;Parent=Msa0222640-mRNA-1 |
chr2_1 | CDS | 71926917 | 71927029 | 71926917 | ID=Msa0222640-mRNA-1:cds;Parent=Msa0222640-mRNA-1 |
chr2_1 | three_prime_UTR | 71927030 | 71927200 | 71927030 | ID=Msa0222640-mRNA-1:three_prime_utr;Parent=Msa0222640-mRNA-1 |
Gene Sequence |
Protein sequence |