AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222820 MtrunA17_Chr2g0328021 91.475 305 6 5 1 302 1 288 0.0 553
Msa0222820 MtrunA17_Chr4g0031411 43.099 355 119 17 1 296 1 331 6.65e-62 199
Msa0222820 MtrunA17_Chr4g0010151 40.549 328 108 17 1 261 1 308 1.22e-47 163
Msa0222820 MtrunA17_Chr7g0237921 37.818 275 115 6 1 238 1 256 2.59e-43 151
Msa0222820 MtrunA17_Chr7g0223311 52.500 160 45 5 1 146 1 143 6.47e-42 148
Msa0222820 MtrunA17_Chr8g0367161 56.000 100 41 1 55 154 12 108 4.33e-33 124
Msa0222820 MtrunA17_Chr8g0374251 62.069 87 29 1 78 164 68 150 1.70e-32 122
Msa0222820 MtrunA17_Chr3g0117601 52.475 101 48 0 28 128 11 111 2.25e-31 119
Msa0222820 MtrunA17_Chr4g0047001 68.919 74 18 1 79 147 56 129 2.64e-31 120
Msa0222820 MtrunA17_Chr8g0341671 76.119 67 14 1 73 139 15 79 7.10e-31 115
Msa0222820 MtrunA17_Chr2g0326001 64.935 77 27 0 56 132 18 94 1.11e-30 117
Msa0222820 MtrunA17_Chr4g0030051 76.923 65 14 1 67 130 29 93 1.34e-30 116
Msa0222820 MtrunA17_Chr5g0411951 82.143 56 10 0 73 128 38 93 1.78e-30 117
Msa0222820 MtrunA17_Chr3g0127201 71.642 67 19 0 67 133 16 82 1.88e-30 116
Msa0222820 MtrunA17_Chr3g0126201 70.149 67 20 0 68 134 41 107 5.70e-30 115
Msa0222820 MtrunA17_Chr8g0374111 52.000 100 44 2 71 166 22 121 9.18e-30 112
Msa0222820 MtrunA17_Chr4g0061761 86.538 52 7 0 77 128 39 90 1.12e-29 114
Msa0222820 MtrunA17_Chr2g0308011 90.000 50 5 0 77 126 36 85 1.44e-28 109
Msa0222820 MtrunA17_Chr8g0346551 72.581 62 17 0 75 136 21 82 2.76e-28 110
Msa0222820 MtrunA17_Chr2g0282511 75.362 69 17 0 77 145 44 112 3.22e-28 110
Msa0222820 MtrunA17_Chr2g0282441 84.314 51 8 0 79 129 26 76 1.55e-27 109
Msa0222820 MtrunA17_Chr1g0188851 68.333 60 19 0 75 134 40 99 6.28e-27 106
Msa0222820 MtrunA17_Chr2g0282051 50.538 93 27 2 42 134 28 101 8.75e-27 105
Msa0222820 MtrunA17_Chr1g0177251 77.358 53 12 0 80 132 14 66 1.00e-26 106
Msa0222820 MtrunA17_Chr4g0047761 75.862 58 13 1 78 135 72 128 1.83e-26 106
Msa0222820 MtrunA17_Chr5g0417571 44.118 102 57 0 30 131 90 191 5.68e-26 104
Msa0222820 MtrunA17_Chr6g0453321 52.273 88 41 1 44 131 103 189 5.91e-26 107
Msa0222820 MtrunA17_Chr2g0283811 56.410 78 30 1 64 141 37 110 7.69e-26 100
Msa0222820 MtrunA17_Chr8g0355261 51.163 86 42 0 56 141 96 181 1.61e-25 105
Msa0222820 MtrunA17_Chr6g0460721 58.824 68 28 0 65 132 76 143 3.37e-24 100
Msa0222820 MtrunA17_Chr7g0217581 61.538 65 25 0 67 131 221 285 6.33e-24 101
Msa0222820 MtrunA17_Chr7g0254161 59.701 67 27 0 65 131 88 154 8.96e-24 100
Msa0222820 MtrunA17_Chr3g0092111 57.534 73 30 1 59 131 118 189 9.51e-24 100
Msa0222820 MtrunA17_Chr5g0417601 47.778 90 47 0 42 131 104 193 1.26e-23 99.4
Msa0222820 MtrunA17_Chr6g0460731 56.716 67 29 0 65 131 83 149 1.98e-23 98.6
Msa0222820 MtrunA17_Chr4g0042481 41.481 135 72 3 75 207 119 248 2.32e-23 99.4
Msa0222820 MtrunA17_Chr5g0417551 47.126 87 45 1 45 131 95 180 1.30e-21 93.6
Msa0222820 MtrunA17_Chr5g0417561 53.333 75 32 1 57 131 101 172 5.25e-21 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222820 AT3G55370.1 39.498 319 157 14 1 290 1 312 1.08e-47 162
Msa0222820 AT3G55370.2 42.975 242 114 9 1 224 1 236 8.08e-46 158
Msa0222820 AT3G55370.3 37.742 310 158 13 9 290 55 357 5.11e-41 146
Msa0222820 AT2G37590.1 51.351 148 55 4 1 134 1 145 1.45e-40 144
Msa0222820 AT2G28810.1 48.408 157 41 4 1 129 1 145 1.03e-37 137
Msa0222820 AT5G65590.1 72.500 80 17 1 65 139 23 102 8.49e-35 128
Msa0222820 AT5G02460.1 56.303 119 35 2 39 157 73 174 1.28e-34 130
Msa0222820 AT2G28810.2 61.702 94 24 1 36 129 47 128 7.52e-34 126
Msa0222820 AT1G07640.1 73.611 72 18 1 64 135 8 78 2.24e-33 124
Msa0222820 AT5G60200.1 65.333 75 26 0 71 145 48 122 4.49e-33 122
Msa0222820 AT1G07640.2 73.611 72 18 1 64 135 64 134 5.12e-33 124
Msa0222820 AT1G07640.3 73.611 72 18 1 64 135 72 142 7.82e-33 124
Msa0222820 AT1G51700.1 47.934 121 63 0 53 173 8 128 1.93e-32 119
Msa0222820 AT5G60850.1 67.532 77 23 1 77 151 50 126 2.57e-32 122
Msa0222820 AT5G66940.1 56.322 87 38 0 64 150 18 104 1.06e-30 115
Msa0222820 AT3G45610.1 63.889 72 26 0 68 139 30 101 2.58e-30 115
Msa0222820 AT5G62940.1 78.333 60 13 0 69 128 64 123 1.13e-29 116
Msa0222820 AT2G28510.1 78.333 60 13 0 77 136 47 106 1.44e-29 114
Msa0222820 AT4G21050.1 57.647 85 33 1 64 148 13 94 1.54e-29 112
Msa0222820 AT3G21270.1 86.792 53 7 0 78 130 29 81 2.00e-29 111
Msa0222820 AT3G52440.1 63.158 76 28 0 74 149 21 96 2.79e-29 112
Msa0222820 AT3G52440.2 63.158 76 28 0 74 149 40 115 3.67e-29 112
Msa0222820 AT1G28310.1 77.586 58 13 0 78 135 27 84 5.02e-29 113
Msa0222820 AT4G38000.1 73.770 61 16 0 72 132 35 95 7.58e-29 111
Msa0222820 AT1G28310.2 77.586 58 13 0 78 135 51 108 7.96e-29 113
Msa0222820 AT1G21340.1 71.667 60 17 0 76 135 36 95 1.85e-28 110
Msa0222820 AT3G50410.1 74.576 59 15 0 78 136 30 88 8.41e-28 108
Msa0222820 AT4G24060.1 66.667 66 22 0 67 132 42 107 1.33e-27 110
Msa0222820 AT3G61850.1 41.667 144 76 4 22 165 20 155 5.75e-27 107
Msa0222820 AT3G61850.2 41.958 143 75 4 23 165 9 143 5.92e-27 107
Msa0222820 AT3G61850.3 41.958 143 75 4 23 165 9 143 5.92e-27 107
Msa0222820 AT3G61850.4 41.958 143 75 4 23 165 21 155 8.85e-27 107
Msa0222820 AT3G61850.5 53.398 103 38 4 63 165 51 143 8.94e-27 107
Msa0222820 AT1G47655.1 68.182 66 20 1 62 126 12 77 2.40e-26 103
Msa0222820 AT4G00940.1 77.358 53 12 0 80 132 70 122 2.79e-25 102
Msa0222820 AT4G00940.3 77.358 53 12 0 80 132 70 122 2.79e-25 102
Msa0222820 AT4G00940.2 77.358 53 12 0 80 132 70 122 2.79e-25 102
Msa0222820 AT1G64620.1 68.852 61 19 0 67 127 38 98 3.67e-25 103
Msa0222820 AT2G34140.1 70.175 57 17 0 75 131 55 111 7.70e-25 98.6
Msa0222820 AT1G29160.1 70.175 57 17 0 75 131 59 115 1.24e-24 98.2
Msa0222820 AT2G46590.1 78.431 51 11 0 75 125 65 115 2.19e-24 101
Msa0222820 AT2G46590.2 78.431 51 11 0 75 125 77 127 2.45e-24 101
Msa0222820 AT5G39660.3 58.108 74 30 1 58 131 119 191 5.84e-24 101
Msa0222820 AT5G39660.1 58.108 74 30 1 58 131 119 191 5.84e-24 101
Msa0222820 AT5G39660.2 58.108 74 30 1 58 131 119 191 5.84e-24 101
Msa0222820 AT3G47500.1 48.352 91 40 2 47 131 74 163 6.87e-24 101
Msa0222820 AT1G69570.1 63.492 63 23 0 75 137 129 191 2.11e-23 99.4
Msa0222820 AT1G26790.1 56.164 73 29 1 59 131 95 164 2.54e-23 99.0
Msa0222820 AT5G62430.1 47.126 87 43 1 45 131 24 107 3.48e-23 97.1
Msa0222820 AT4G21040.1 35.955 178 74 8 80 218 27 203 1.57e-22 94.0
Msa0222820 AT4G21080.1 61.905 63 20 1 80 142 27 85 1.11e-21 92.0
Msa0222820 AT4G21030.1 49.296 71 32 1 70 140 17 83 1.82e-15 73.9

Find 95 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATGATATCAATATTATT+TGG 0.137554 2_1:+72250796 Msa0222820:three_prime_UTR
TTATGTATTGTGTGAGTTTA+TGG 0.180155 2_1:+72250685 Msa0222820:three_prime_UTR
ATAAAGTTTGATGGCTCTTT+AGG 0.188592 2_1:-72249112 None:intergenic
AACACAAGCATGGTAGTATT+TGG 0.212704 2_1:+72250609 Msa0222820:three_prime_UTR
GCAAGACATGTAGGCGTTAT+TGG 0.219753 2_1:+72249683 Msa0222820:CDS
TTGAACCAACAACTACTTCT+AGG 0.230645 2_1:+72250094 Msa0222820:CDS
TTCTCATTACTATTTGATAT+TGG 0.260955 2_1:-72249802 None:intergenic
CAGTTTCCTTTCATGAATAA+TGG 0.306796 2_1:+72250021 Msa0222820:CDS
TCAACAATTTCACTTTGAAA+TGG 0.326972 2_1:-72250075 None:intergenic
TAAAGTTTGATGGCTCTTTA+GGG 0.328358 2_1:-72249111 None:intergenic
TGAAGAGATGTCATGTAATT+AGG 0.330958 2_1:-72249895 None:intergenic
TTATTCTCTGACATATTCAT+TGG 0.339957 2_1:-72250186 None:intergenic
TTGTCTTTAATAAAGTTTGA+TGG 0.349192 2_1:-72249121 None:intergenic
CAACAATTTCACTTTGAAAT+GGG 0.353913 2_1:-72250074 None:intergenic
TTATGATATCAATATTATTT+GGG 0.362696 2_1:+72250797 Msa0222820:three_prime_UTR
ACAACCATTACAATAATTCA+TGG 0.381419 2_1:+72250208 Msa0222820:CDS
GTTGGAAACATGTTTCAAAT+TGG 0.387187 2_1:+72249937 Msa0222820:CDS
GGAAGCAACTGATGTTGATT+TGG 0.388221 2_1:-72249424 None:intergenic
AGCTTGATCCGGTATCGAAC+CGG 0.392442 2_1:-72249494 None:intergenic
TCATGGTCTTGCATCTTCTT+CGG 0.406074 2_1:+72250239 Msa0222820:CDS
CAAGAGGAGTTGAAGTTGAA+TGG 0.407718 2_1:-72249846 None:intergenic
ATGGTGCAGGCTCAATTATC+AGG 0.408827 2_1:+72249470 Msa0222820:CDS
GATGCCTGCATCGGTTAAAT+CGG 0.412501 2_1:+72250128 Msa0222820:CDS
TGTAATTAGGTCTATTAGTT+GGG 0.420123 2_1:-72249882 None:intergenic
ATCCAGGGCATCATCTTTGA+TGG 0.425201 2_1:+72250488 Msa0222820:intron
ATGTAATTAGGTCTATTAGT+TGG 0.434589 2_1:-72249883 None:intergenic
CTTATTTAGATCCTCTCAAT+TGG 0.441172 2_1:+72249196 Msa0222820:CDS
AAGGAGGAGTTGTGGATCAG+TGG 0.442180 2_1:+72249989 Msa0222820:CDS
ATCGTTTGCACTGCTAGAAA+AGG 0.445327 2_1:+72250284 Msa0222820:three_prime_UTR
CATTCAACTTCAACTCCTCT+TGG 0.446006 2_1:+72249847 Msa0222820:CDS
ATAAAGCATTAAAGTGAAGA+TGG 0.447249 2_1:-72249040 None:intergenic
TGAAGTTCAAACTGGTCATC+AGG 0.450714 2_1:+72249534 Msa0222820:CDS
TATCAGGCCCGGTTCGATAC+CGG 0.455922 2_1:+72249486 Msa0222820:CDS
CTACGACACCCTCCACCAAC+AGG 0.460856 2_1:-72249733 None:intergenic
AAAAGTGTCTTGGTTGAGAC+AGG 0.461945 2_1:-72249660 None:intergenic
TTGAGAGGATCTAAATAAGA+TGG 0.471759 2_1:-72249192 None:intergenic
CAGTCCATGAATTATTGTAA+TGG 0.478494 2_1:-72250212 None:intergenic
TCAAGTACTGGTGGAGGAGA+AGG 0.484627 2_1:+72249970 Msa0222820:CDS
ACATGTTTCCAACACCGAAC+CGG 0.484940 2_1:-72249927 None:intergenic
TGTAAATCATGTTGTTCAGC+TGG 0.485690 2_1:-72250534 None:intergenic
GGTGATTATAGTTCAAGTAC+TGG 0.489772 2_1:+72249958 Msa0222820:CDS
TTGATGGCTCTTTAGGGAGA+TGG 0.494870 2_1:-72249105 None:intergenic
TGAACCAACAACTACTTCTA+GGG 0.497338 2_1:+72250095 Msa0222820:CDS
GCCTGAGCTTGAGCTTGATC+CGG 0.498212 2_1:-72249505 None:intergenic
TGTTCCGATTTAACCGATGC+AGG 0.498710 2_1:-72250132 None:intergenic
GCAGCTCATGAAGTTCAAAC+TGG 0.502505 2_1:+72249526 Msa0222820:CDS
CTTCAGAATCTGAACCGGTT+CGG 0.507338 2_1:+72249913 Msa0222820:CDS
CATCTCTTCAGAATCTGAAC+CGG 0.507412 2_1:+72249908 Msa0222820:CDS
AATCTGAACCGGTTCGGTGT+TGG 0.507539 2_1:+72249919 Msa0222820:CDS
GGTGGAGAATCACACTATAG+TGG 0.510978 2_1:-72249084 None:intergenic
TCTTCGAATGGCGAAAATCA+AGG 0.513934 2_1:+72250567 Msa0222820:three_prime_UTR
TACTACTTTGATGCCTGCAT+CGG 0.514344 2_1:+72250119 Msa0222820:CDS
GTAACCCTAGAAGTAGTTGT+TGG 0.518165 2_1:-72250099 None:intergenic
TTAAGAAATGTTCCTGTTGG+TGG 0.525025 2_1:+72249721 Msa0222820:CDS
ACCGGATCAAGCTCAAGCTC+AGG 0.531426 2_1:+72249504 Msa0222820:CDS
ATTAAAGTGAAGATGGAGGA+AGG 0.533160 2_1:-72249033 None:intergenic
CATGTCTTGCAAAAGTGTCT+TGG 0.535988 2_1:-72249670 None:intergenic
TCATCACAGCCACATGGTGC+AGG 0.545230 2_1:+72249457 Msa0222820:CDS
TCAAAACCATTATTCATGAA+AGG 0.546534 2_1:-72250027 None:intergenic
CACTTCAAAGCTGTCTCTGA+AGG 0.551798 2_1:-72249586 None:intergenic
ATGGCTCTTTAGGGAGATGG+TGG 0.554378 2_1:-72249102 None:intergenic
AGAAATGTTCCTGTTGGTGG+AGG 0.558097 2_1:+72249724 Msa0222820:CDS
CAAGTTGCACTATCTTCGAA+TGG 0.559769 2_1:+72250555 Msa0222820:three_prime_UTR
CTTACTTGCTGCCAATTGAG+AGG 0.568314 2_1:-72249207 None:intergenic
AAATCGGAACACAACGGAGG+AGG 0.573191 2_1:+72250144 Msa0222820:CDS
GCATTAAGAAATGTTCCTGT+TGG 0.573758 2_1:+72249718 Msa0222820:CDS
GCTTGATCCGGTATCGAACC+GGG 0.575393 2_1:-72249493 None:intergenic
GCAGGCTCAATTATCAGGCC+CGG 0.575596 2_1:+72249475 Msa0222820:CDS
AAGGTGGTGGTAACTTAGCT+TGG 0.577015 2_1:-72249567 None:intergenic
AGTACTGGTGGAGGAGAAGG+AGG 0.578007 2_1:+72249973 Msa0222820:CDS
AAAGCTGTCTCTGAAGGTGG+TGG 0.586444 2_1:-72249580 None:intergenic
TATAGTTCAAGTACTGGTGG+AGG 0.593548 2_1:+72249964 Msa0222820:CDS
GATTATAGTTCAAGTACTGG+TGG 0.600312 2_1:+72249961 Msa0222820:CDS
GTAGGCGTTATTGGACAAGA+GGG 0.605161 2_1:+72249692 Msa0222820:CDS
AAGCATTAAAGTGAAGATGG+AGG 0.608260 2_1:-72249037 None:intergenic
AAAAGAAATAAACACAAGCA+TGG 0.611926 2_1:+72250599 Msa0222820:three_prime_UTR
TGTGGCTGTGATGAGGATAG+TGG 0.611946 2_1:-72249448 None:intergenic
TGGAGGAGAAGGAGGAGTTG+TGG 0.612099 2_1:+72249981 Msa0222820:CDS
TGTAGGCGTTATTGGACAAG+AGG 0.616737 2_1:+72249691 Msa0222820:CDS
TTCAAAGCTGTCTCTGAAGG+TGG 0.619079 2_1:-72249583 None:intergenic
AAAGTGAAGATGGAGGAAGG+AGG 0.625356 2_1:-72249030 None:intergenic
GAAATGTTCCTGTTGGTGGA+GGG 0.644271 2_1:+72249725 Msa0222820:CDS
CTATCCTCATCACAGCCACA+TGG 0.646501 2_1:+72249451 Msa0222820:CDS
GGCTGTGATGAGGATAGTGG+TGG 0.646948 2_1:-72249445 None:intergenic
GGAAGGAGGAAAGCAAGAAG+AGG 0.648563 2_1:-72249016 None:intergenic
TGCACCATGTGGCTGTGATG+AGG 0.663808 2_1:-72249455 None:intergenic
TAGGCGTTATTGGACAAGAG+GGG 0.675252 2_1:+72249693 Msa0222820:CDS
AGGCGTTATTGGACAAGAGG+GGG 0.675862 2_1:+72249694 Msa0222820:CDS
ATAATTGAGCCTGCACCATG+TGG 0.676504 2_1:-72249466 None:intergenic
CGCAAAAGGATTGAACACCA+TGG 0.701433 2_1:+72249155 Msa0222820:exon
TGGAATAGAAGAGAAAACCA+TGG 0.712223 2_1:-72249172 None:intergenic
GGGTGTAAGAATTCACCAAG+AGG 0.726422 2_1:-72249862 None:intergenic
GTGTTGGTTGATTCACAACG+AGG 0.729681 2_1:-72249610 None:intergenic
GTTAAATCGGAACACAACGG+AGG 0.733463 2_1:+72250141 Msa0222820:CDS
TCGGTTAAATCGGAACACAA+CGG 0.745806 2_1:+72250138 Msa0222820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGATATCAATATTATTT+GGG + chr2_1:72250797-72250816 Msa0222820:three_prime_UTR 10.0%
!! TTATGATATCAATATTATTT+GGG + chr2_1:72250797-72250816 Msa0222820:three_prime_UTR 10.0%
!! TATTATTATTACAAAGGAAT+AGG - chr2_1:72249279-72249298 None:intergenic 15.0%
!! AGAAGATATTATTATTACAA+AGG - chr2_1:72249285-72249304 None:intergenic 15.0%
!! GTTATGATATCAATATTATT+TGG + chr2_1:72250796-72250815 Msa0222820:three_prime_UTR 15.0%
!! TATTATTATTACAAAGGAAT+AGG - chr2_1:72249279-72249298 None:intergenic 15.0%
!! AGAAGATATTATTATTACAA+AGG - chr2_1:72249285-72249304 None:intergenic 15.0%
!! GTTATGATATCAATATTATT+TGG + chr2_1:72250796-72250815 Msa0222820:three_prime_UTR 15.0%
!! TTGTCTTTAATAAAGTTTGA+TGG - chr2_1:72249124-72249143 None:intergenic 20.0%
!! CAAAAAAATAAAAACGCAAA+AGG + chr2_1:72249141-72249160 Msa0222820:five_prime_UTR 20.0%
!!! TAAATAAATTCACTCTTTTG+TGG - chr2_1:72249254-72249273 None:intergenic 20.0%
!! TCATATATAGATATATCACA+AGG - chr2_1:72249376-72249395 None:intergenic 20.0%
!! TTCTCATTACTATTTGATAT+TGG - chr2_1:72249805-72249824 None:intergenic 20.0%
!! TTGTCTTTAATAAAGTTTGA+TGG - chr2_1:72249124-72249143 None:intergenic 20.0%
!! CAAAAAAATAAAAACGCAAA+AGG + chr2_1:72249141-72249160 Msa0222820:five_prime_UTR 20.0%
!!! TAAATAAATTCACTCTTTTG+TGG - chr2_1:72249254-72249273 None:intergenic 20.0%
!! TCATATATAGATATATCACA+AGG - chr2_1:72249376-72249395 None:intergenic 20.0%
!! TTCTCATTACTATTTGATAT+TGG - chr2_1:72249805-72249824 None:intergenic 20.0%
!! ATAAAGCATTAAAGTGAAGA+TGG - chr2_1:72249043-72249062 None:intergenic 25.0%
! TGTAATGAAAAAAAATCTGC+AGG - chr2_1:72249316-72249335 None:intergenic 25.0%
!! GTAGTAACAAAATTTTGTGT+TGG - chr2_1:72249629-72249648 None:intergenic 25.0%
!! TTTGATATTGGAGATTTTGA+GGG - chr2_1:72249793-72249812 None:intergenic 25.0%
!! ATTTGATATTGGAGATTTTG+AGG - chr2_1:72249794-72249813 None:intergenic 25.0%
! TGTAATTAGGTCTATTAGTT+GGG - chr2_1:72249885-72249904 None:intergenic 25.0%
! ATGTAATTAGGTCTATTAGT+TGG - chr2_1:72249886-72249905 None:intergenic 25.0%
! TCAAAACCATTATTCATGAA+AGG - chr2_1:72250030-72250049 None:intergenic 25.0%
!!! CAACAATTTCACTTTGAAAT+GGG - chr2_1:72250077-72250096 None:intergenic 25.0%
!! TCAACAATTTCACTTTGAAA+TGG - chr2_1:72250078-72250097 None:intergenic 25.0%
! TTATTCTCTGACATATTCAT+TGG - chr2_1:72250189-72250208 None:intergenic 25.0%
! ACAACCATTACAATAATTCA+TGG + chr2_1:72250208-72250227 Msa0222820:CDS 25.0%
! ATACTTAGAGATGAAATTAG+AGG + chr2_1:72250377-72250396 Msa0222820:intron 25.0%
! AAAAGAAATAAACACAAGCA+TGG + chr2_1:72250599-72250618 Msa0222820:three_prime_UTR 25.0%
! TTATGTATTGTGTGAGTTTA+TGG + chr2_1:72250685-72250704 Msa0222820:three_prime_UTR 25.0%
!!! CTTTATCTTGTTTTTCTTTG+TGG - chr2_1:72248996-72249015 None:intergenic 25.0%
!! ATAAAGCATTAAAGTGAAGA+TGG - chr2_1:72249043-72249062 None:intergenic 25.0%
! TGTAATGAAAAAAAATCTGC+AGG - chr2_1:72249316-72249335 None:intergenic 25.0%
!! GTAGTAACAAAATTTTGTGT+TGG - chr2_1:72249629-72249648 None:intergenic 25.0%
!! TTTGATATTGGAGATTTTGA+GGG - chr2_1:72249793-72249812 None:intergenic 25.0%
!! ATTTGATATTGGAGATTTTG+AGG - chr2_1:72249794-72249813 None:intergenic 25.0%
! TGTAATTAGGTCTATTAGTT+GGG - chr2_1:72249885-72249904 None:intergenic 25.0%
! ATGTAATTAGGTCTATTAGT+TGG - chr2_1:72249886-72249905 None:intergenic 25.0%
! TCAAAACCATTATTCATGAA+AGG - chr2_1:72250030-72250049 None:intergenic 25.0%
!!! CAACAATTTCACTTTGAAAT+GGG - chr2_1:72250077-72250096 None:intergenic 25.0%
!! TCAACAATTTCACTTTGAAA+TGG - chr2_1:72250078-72250097 None:intergenic 25.0%
! TTATTCTCTGACATATTCAT+TGG - chr2_1:72250189-72250208 None:intergenic 25.0%
! ACAACCATTACAATAATTCA+TGG + chr2_1:72250208-72250227 Msa0222820:CDS 25.0%
! ATACTTAGAGATGAAATTAG+AGG + chr2_1:72250377-72250396 Msa0222820:intron 25.0%
! AAAAGAAATAAACACAAGCA+TGG + chr2_1:72250599-72250618 Msa0222820:three_prime_UTR 25.0%
! TTATGTATTGTGTGAGTTTA+TGG + chr2_1:72250685-72250704 Msa0222820:three_prime_UTR 25.0%
! TAAAGTTTGATGGCTCTTTA+GGG - chr2_1:72249114-72249133 None:intergenic 30.0%
! ATAAAGTTTGATGGCTCTTT+AGG - chr2_1:72249115-72249134 None:intergenic 30.0%
TTGAGAGGATCTAAATAAGA+TGG - chr2_1:72249195-72249214 None:intergenic 30.0%
CTTATTTAGATCCTCTCAAT+TGG + chr2_1:72249196-72249215 Msa0222820:CDS 30.0%
TATCACAAGGTTACAAGAAA+GGG - chr2_1:72249363-72249382 None:intergenic 30.0%
ATATCACAAGGTTACAAGAA+AGG - chr2_1:72249364-72249383 None:intergenic 30.0%
TGAAGAGATGTCATGTAATT+AGG - chr2_1:72249898-72249917 None:intergenic 30.0%
GTTGGAAACATGTTTCAAAT+TGG + chr2_1:72249937-72249956 Msa0222820:CDS 30.0%
CAGTTTCCTTTCATGAATAA+TGG + chr2_1:72250021-72250040 Msa0222820:CDS 30.0%
CAGTCCATGAATTATTGTAA+TGG - chr2_1:72250215-72250234 None:intergenic 30.0%
!! AATTCATGGACTGATTTTCA+TGG + chr2_1:72250222-72250241 Msa0222820:CDS 30.0%
GCTAGAAAAGGTTGAATTAT+TGG + chr2_1:72250296-72250315 Msa0222820:intron 30.0%
CATCTCTAAGTATAAGTTAG+AGG - chr2_1:72250370-72250389 None:intergenic 30.0%
TATCATCAGTTATCAAATCC+AGG + chr2_1:72250472-72250491 Msa0222820:intron 30.0%
ATCATCAGTTATCAAATCCA+GGG + chr2_1:72250473-72250492 Msa0222820:intron 30.0%
! TAAAGTTTGATGGCTCTTTA+GGG - chr2_1:72249114-72249133 None:intergenic 30.0%
! ATAAAGTTTGATGGCTCTTT+AGG - chr2_1:72249115-72249134 None:intergenic 30.0%
TTGAGAGGATCTAAATAAGA+TGG - chr2_1:72249195-72249214 None:intergenic 30.0%
CTTATTTAGATCCTCTCAAT+TGG + chr2_1:72249196-72249215 Msa0222820:CDS 30.0%
TATCACAAGGTTACAAGAAA+GGG - chr2_1:72249363-72249382 None:intergenic 30.0%
ATATCACAAGGTTACAAGAA+AGG - chr2_1:72249364-72249383 None:intergenic 30.0%
TGAAGAGATGTCATGTAATT+AGG - chr2_1:72249898-72249917 None:intergenic 30.0%
GTTGGAAACATGTTTCAAAT+TGG + chr2_1:72249937-72249956 Msa0222820:CDS 30.0%
CAGTTTCCTTTCATGAATAA+TGG + chr2_1:72250021-72250040 Msa0222820:CDS 30.0%
CAGTCCATGAATTATTGTAA+TGG - chr2_1:72250215-72250234 None:intergenic 30.0%
!! AATTCATGGACTGATTTTCA+TGG + chr2_1:72250222-72250241 Msa0222820:CDS 30.0%
GCTAGAAAAGGTTGAATTAT+TGG + chr2_1:72250296-72250315 Msa0222820:intron 30.0%
CATCTCTAAGTATAAGTTAG+AGG - chr2_1:72250370-72250389 None:intergenic 30.0%
TATCATCAGTTATCAAATCC+AGG + chr2_1:72250472-72250491 Msa0222820:intron 30.0%
ATCATCAGTTATCAAATCCA+GGG + chr2_1:72250473-72250492 Msa0222820:intron 30.0%
ATTAAAGTGAAGATGGAGGA+AGG - chr2_1:72249036-72249055 None:intergenic 35.0%
AAGCATTAAAGTGAAGATGG+AGG - chr2_1:72249040-72249059 None:intergenic 35.0%
TGGAATAGAAGAGAAAACCA+TGG - chr2_1:72249175-72249194 None:intergenic 35.0%
GCATTAAGAAATGTTCCTGT+TGG + chr2_1:72249718-72249737 Msa0222820:CDS 35.0%
TTAAGAAATGTTCCTGTTGG+TGG + chr2_1:72249721-72249740 Msa0222820:CDS 35.0%
!!! AGTAGAGGTGTTACTCTTTT+TGG - chr2_1:72249770-72249789 None:intergenic 35.0%
GGTGATTATAGTTCAAGTAC+TGG + chr2_1:72249958-72249977 Msa0222820:CDS 35.0%
!! GATTATAGTTCAAGTACTGG+TGG + chr2_1:72249961-72249980 Msa0222820:CDS 35.0%
TTGAACCAACAACTACTTCT+AGG + chr2_1:72250094-72250113 Msa0222820:CDS 35.0%
TGAACCAACAACTACTTCTA+GGG + chr2_1:72250095-72250114 Msa0222820:CDS 35.0%
TGTAAATCATGTTGTTCAGC+TGG - chr2_1:72250537-72250556 None:intergenic 35.0%
AACACAAGCATGGTAGTATT+TGG + chr2_1:72250609-72250628 Msa0222820:three_prime_UTR 35.0%
ATTAAAGTGAAGATGGAGGA+AGG - chr2_1:72249036-72249055 None:intergenic 35.0%
AAGCATTAAAGTGAAGATGG+AGG - chr2_1:72249040-72249059 None:intergenic 35.0%
TGGAATAGAAGAGAAAACCA+TGG - chr2_1:72249175-72249194 None:intergenic 35.0%
GCATTAAGAAATGTTCCTGT+TGG + chr2_1:72249718-72249737 Msa0222820:CDS 35.0%
TTAAGAAATGTTCCTGTTGG+TGG + chr2_1:72249721-72249740 Msa0222820:CDS 35.0%
!!! AGTAGAGGTGTTACTCTTTT+TGG - chr2_1:72249770-72249789 None:intergenic 35.0%
GGTGATTATAGTTCAAGTAC+TGG + chr2_1:72249958-72249977 Msa0222820:CDS 35.0%
!! GATTATAGTTCAAGTACTGG+TGG + chr2_1:72249961-72249980 Msa0222820:CDS 35.0%
TTGAACCAACAACTACTTCT+AGG + chr2_1:72250094-72250113 Msa0222820:CDS 35.0%
TGAACCAACAACTACTTCTA+GGG + chr2_1:72250095-72250114 Msa0222820:CDS 35.0%
TGTAAATCATGTTGTTCAGC+TGG - chr2_1:72250537-72250556 None:intergenic 35.0%
AACACAAGCATGGTAGTATT+TGG + chr2_1:72250609-72250628 Msa0222820:three_prime_UTR 35.0%
! GGAAGCAACTGATGTTGATT+TGG - chr2_1:72249427-72249446 None:intergenic 40.0%
TGAAGTTCAAACTGGTCATC+AGG + chr2_1:72249534-72249553 Msa0222820:CDS 40.0%
!! AAAAGTGTCTTGGTTGAGAC+AGG - chr2_1:72249663-72249682 None:intergenic 40.0%
!! CATGTCTTGCAAAAGTGTCT+TGG - chr2_1:72249673-72249692 None:intergenic 40.0%
! GACACTTTTGCAAGACATGT+AGG + chr2_1:72249674-72249693 Msa0222820:CDS 40.0%
CAAGAGGAGTTGAAGTTGAA+TGG - chr2_1:72249849-72249868 None:intergenic 40.0%
CATTCAACTTCAACTCCTCT+TGG + chr2_1:72249847-72249866 Msa0222820:CDS 40.0%
CATCTCTTCAGAATCTGAAC+CGG + chr2_1:72249908-72249927 Msa0222820:CDS 40.0%
!! TATAGTTCAAGTACTGGTGG+AGG + chr2_1:72249964-72249983 Msa0222820:CDS 40.0%
GTAACCCTAGAAGTAGTTGT+TGG - chr2_1:72250102-72250121 None:intergenic 40.0%
TACTACTTTGATGCCTGCAT+CGG + chr2_1:72250119-72250138 Msa0222820:CDS 40.0%
TCGGTTAAATCGGAACACAA+CGG + chr2_1:72250138-72250157 Msa0222820:CDS 40.0%
! TCATGGTCTTGCATCTTCTT+CGG + chr2_1:72250239-72250258 Msa0222820:CDS 40.0%
ATCGTTTGCACTGCTAGAAA+AGG + chr2_1:72250284-72250303 Msa0222820:three_prime_UTR 40.0%
CAAGTTGCACTATCTTCGAA+TGG + chr2_1:72250555-72250574 Msa0222820:three_prime_UTR 40.0%
TCTTCGAATGGCGAAAATCA+AGG + chr2_1:72250567-72250586 Msa0222820:three_prime_UTR 40.0%
! GGAAGCAACTGATGTTGATT+TGG - chr2_1:72249427-72249446 None:intergenic 40.0%
TGAAGTTCAAACTGGTCATC+AGG + chr2_1:72249534-72249553 Msa0222820:CDS 40.0%
!! AAAAGTGTCTTGGTTGAGAC+AGG - chr2_1:72249663-72249682 None:intergenic 40.0%
!! CATGTCTTGCAAAAGTGTCT+TGG - chr2_1:72249673-72249692 None:intergenic 40.0%
! GACACTTTTGCAAGACATGT+AGG + chr2_1:72249674-72249693 Msa0222820:CDS 40.0%
CAAGAGGAGTTGAAGTTGAA+TGG - chr2_1:72249849-72249868 None:intergenic 40.0%
CATTCAACTTCAACTCCTCT+TGG + chr2_1:72249847-72249866 Msa0222820:CDS 40.0%
CATCTCTTCAGAATCTGAAC+CGG + chr2_1:72249908-72249927 Msa0222820:CDS 40.0%
!! TATAGTTCAAGTACTGGTGG+AGG + chr2_1:72249964-72249983 Msa0222820:CDS 40.0%
GTAACCCTAGAAGTAGTTGT+TGG - chr2_1:72250102-72250121 None:intergenic 40.0%
TACTACTTTGATGCCTGCAT+CGG + chr2_1:72250119-72250138 Msa0222820:CDS 40.0%
TCGGTTAAATCGGAACACAA+CGG + chr2_1:72250138-72250157 Msa0222820:CDS 40.0%
! TCATGGTCTTGCATCTTCTT+CGG + chr2_1:72250239-72250258 Msa0222820:CDS 40.0%
ATCGTTTGCACTGCTAGAAA+AGG + chr2_1:72250284-72250303 Msa0222820:three_prime_UTR 40.0%
CAAGTTGCACTATCTTCGAA+TGG + chr2_1:72250555-72250574 Msa0222820:three_prime_UTR 40.0%
TCTTCGAATGGCGAAAATCA+AGG + chr2_1:72250567-72250586 Msa0222820:three_prime_UTR 40.0%
AAAGTGAAGATGGAGGAAGG+AGG - chr2_1:72249033-72249052 None:intergenic 45.0%
GGTGGAGAATCACACTATAG+TGG - chr2_1:72249087-72249106 None:intergenic 45.0%
! TTGATGGCTCTTTAGGGAGA+TGG - chr2_1:72249108-72249127 None:intergenic 45.0%
CGCAAAAGGATTGAACACCA+TGG + chr2_1:72249155-72249174 Msa0222820:exon 45.0%
! CTTACTTGCTGCCAATTGAG+AGG - chr2_1:72249210-72249229 None:intergenic 45.0%
ATAATTGAGCCTGCACCATG+TGG - chr2_1:72249469-72249488 None:intergenic 45.0%
ATGGTGCAGGCTCAATTATC+AGG + chr2_1:72249470-72249489 Msa0222820:CDS 45.0%
GCAGCTCATGAAGTTCAAAC+TGG + chr2_1:72249526-72249545 Msa0222820:CDS 45.0%
! AAGGTGGTGGTAACTTAGCT+TGG - chr2_1:72249570-72249589 None:intergenic 45.0%
! TTCAAAGCTGTCTCTGAAGG+TGG - chr2_1:72249586-72249605 None:intergenic 45.0%
CACTTCAAAGCTGTCTCTGA+AGG - chr2_1:72249589-72249608 None:intergenic 45.0%
!! GTGTTGGTTGATTCACAACG+AGG - chr2_1:72249613-72249632 None:intergenic 45.0%
GCAAGACATGTAGGCGTTAT+TGG + chr2_1:72249683-72249702 Msa0222820:CDS 45.0%
TGTAGGCGTTATTGGACAAG+AGG + chr2_1:72249691-72249710 Msa0222820:CDS 45.0%
GTAGGCGTTATTGGACAAGA+GGG + chr2_1:72249692-72249711 Msa0222820:CDS 45.0%
TAGGCGTTATTGGACAAGAG+GGG + chr2_1:72249693-72249712 Msa0222820:CDS 45.0%
! AGAAATGTTCCTGTTGGTGG+AGG + chr2_1:72249724-72249743 Msa0222820:CDS 45.0%
! GAAATGTTCCTGTTGGTGGA+GGG + chr2_1:72249725-72249744 Msa0222820:CDS 45.0%
!! TGGAGATTTTGAGGGAGTAG+AGG - chr2_1:72249785-72249804 None:intergenic 45.0%
GGGTGTAAGAATTCACCAAG+AGG - chr2_1:72249865-72249884 None:intergenic 45.0%
CTTCAGAATCTGAACCGGTT+CGG + chr2_1:72249913-72249932 Msa0222820:CDS 45.0%
ACATGTTTCCAACACCGAAC+CGG - chr2_1:72249930-72249949 None:intergenic 45.0%
!! GATGCCTGCATCGGTTAAAT+CGG + chr2_1:72250128-72250147 Msa0222820:CDS 45.0%
TGTTCCGATTTAACCGATGC+AGG - chr2_1:72250135-72250154 None:intergenic 45.0%
GTTAAATCGGAACACAACGG+AGG + chr2_1:72250141-72250160 Msa0222820:CDS 45.0%
! ATCCAGGGCATCATCTTTGA+TGG + chr2_1:72250488-72250507 Msa0222820:intron 45.0%
ATCCATCAAAGATGATGCCC+TGG - chr2_1:72250493-72250512 None:intergenic 45.0%
AAAGTGAAGATGGAGGAAGG+AGG - chr2_1:72249033-72249052 None:intergenic 45.0%
GGTGGAGAATCACACTATAG+TGG - chr2_1:72249087-72249106 None:intergenic 45.0%
! TTGATGGCTCTTTAGGGAGA+TGG - chr2_1:72249108-72249127 None:intergenic 45.0%
CGCAAAAGGATTGAACACCA+TGG + chr2_1:72249155-72249174 Msa0222820:exon 45.0%
! CTTACTTGCTGCCAATTGAG+AGG - chr2_1:72249210-72249229 None:intergenic 45.0%
ATAATTGAGCCTGCACCATG+TGG - chr2_1:72249469-72249488 None:intergenic 45.0%
ATGGTGCAGGCTCAATTATC+AGG + chr2_1:72249470-72249489 Msa0222820:CDS 45.0%
GCAGCTCATGAAGTTCAAAC+TGG + chr2_1:72249526-72249545 Msa0222820:CDS 45.0%
! AAGGTGGTGGTAACTTAGCT+TGG - chr2_1:72249570-72249589 None:intergenic 45.0%
! TTCAAAGCTGTCTCTGAAGG+TGG - chr2_1:72249586-72249605 None:intergenic 45.0%
CACTTCAAAGCTGTCTCTGA+AGG - chr2_1:72249589-72249608 None:intergenic 45.0%
!! GTGTTGGTTGATTCACAACG+AGG - chr2_1:72249613-72249632 None:intergenic 45.0%
GCAAGACATGTAGGCGTTAT+TGG + chr2_1:72249683-72249702 Msa0222820:CDS 45.0%
TGTAGGCGTTATTGGACAAG+AGG + chr2_1:72249691-72249710 Msa0222820:CDS 45.0%
GTAGGCGTTATTGGACAAGA+GGG + chr2_1:72249692-72249711 Msa0222820:CDS 45.0%
TAGGCGTTATTGGACAAGAG+GGG + chr2_1:72249693-72249712 Msa0222820:CDS 45.0%
! AGAAATGTTCCTGTTGGTGG+AGG + chr2_1:72249724-72249743 Msa0222820:CDS 45.0%
! GAAATGTTCCTGTTGGTGGA+GGG + chr2_1:72249725-72249744 Msa0222820:CDS 45.0%
!! TGGAGATTTTGAGGGAGTAG+AGG - chr2_1:72249785-72249804 None:intergenic 45.0%
GGGTGTAAGAATTCACCAAG+AGG - chr2_1:72249865-72249884 None:intergenic 45.0%
CTTCAGAATCTGAACCGGTT+CGG + chr2_1:72249913-72249932 Msa0222820:CDS 45.0%
ACATGTTTCCAACACCGAAC+CGG - chr2_1:72249930-72249949 None:intergenic 45.0%
!! GATGCCTGCATCGGTTAAAT+CGG + chr2_1:72250128-72250147 Msa0222820:CDS 45.0%
TGTTCCGATTTAACCGATGC+AGG - chr2_1:72250135-72250154 None:intergenic 45.0%
GTTAAATCGGAACACAACGG+AGG + chr2_1:72250141-72250160 Msa0222820:CDS 45.0%
! ATCCAGGGCATCATCTTTGA+TGG + chr2_1:72250488-72250507 Msa0222820:intron 45.0%
ATCCATCAAAGATGATGCCC+TGG - chr2_1:72250493-72250512 None:intergenic 45.0%
GGAAGGAGGAAAGCAAGAAG+AGG - chr2_1:72249019-72249038 None:intergenic 50.0%
! ATGGCTCTTTAGGGAGATGG+TGG - chr2_1:72249105-72249124 None:intergenic 50.0%
TGTGGCTGTGATGAGGATAG+TGG - chr2_1:72249451-72249470 None:intergenic 50.0%
CTATCCTCATCACAGCCACA+TGG + chr2_1:72249451-72249470 Msa0222820:CDS 50.0%
! AGCTTGATCCGGTATCGAAC+CGG - chr2_1:72249497-72249516 None:intergenic 50.0%
! AAAGCTGTCTCTGAAGGTGG+TGG - chr2_1:72249583-72249602 None:intergenic 50.0%
AGGCGTTATTGGACAAGAGG+GGG + chr2_1:72249694-72249713 Msa0222820:CDS 50.0%
!! AATCTGAACCGGTTCGGTGT+TGG + chr2_1:72249919-72249938 Msa0222820:CDS 50.0%
!! TCAAGTACTGGTGGAGGAGA+AGG + chr2_1:72249970-72249989 Msa0222820:CDS 50.0%
AAGGAGGAGTTGTGGATCAG+TGG + chr2_1:72249989-72250008 Msa0222820:CDS 50.0%
AAATCGGAACACAACGGAGG+AGG + chr2_1:72250144-72250163 Msa0222820:CDS 50.0%
GGAAGGAGGAAAGCAAGAAG+AGG - chr2_1:72249019-72249038 None:intergenic 50.0%
! ATGGCTCTTTAGGGAGATGG+TGG - chr2_1:72249105-72249124 None:intergenic 50.0%
TGTGGCTGTGATGAGGATAG+TGG - chr2_1:72249451-72249470 None:intergenic 50.0%
CTATCCTCATCACAGCCACA+TGG + chr2_1:72249451-72249470 Msa0222820:CDS 50.0%
! AGCTTGATCCGGTATCGAAC+CGG - chr2_1:72249497-72249516 None:intergenic 50.0%
! AAAGCTGTCTCTGAAGGTGG+TGG - chr2_1:72249583-72249602 None:intergenic 50.0%
AGGCGTTATTGGACAAGAGG+GGG + chr2_1:72249694-72249713 Msa0222820:CDS 50.0%
!! AATCTGAACCGGTTCGGTGT+TGG + chr2_1:72249919-72249938 Msa0222820:CDS 50.0%
!! TCAAGTACTGGTGGAGGAGA+AGG + chr2_1:72249970-72249989 Msa0222820:CDS 50.0%
AAGGAGGAGTTGTGGATCAG+TGG + chr2_1:72249989-72250008 Msa0222820:CDS 50.0%
AAATCGGAACACAACGGAGG+AGG + chr2_1:72250144-72250163 Msa0222820:CDS 50.0%
! GGCTGTGATGAGGATAGTGG+TGG - chr2_1:72249448-72249467 None:intergenic 55.0%
TGCACCATGTGGCTGTGATG+AGG - chr2_1:72249458-72249477 None:intergenic 55.0%
TCATCACAGCCACATGGTGC+AGG + chr2_1:72249457-72249476 Msa0222820:CDS 55.0%
GCAGGCTCAATTATCAGGCC+CGG + chr2_1:72249475-72249494 Msa0222820:CDS 55.0%
! TATCAGGCCCGGTTCGATAC+CGG + chr2_1:72249486-72249505 Msa0222820:CDS 55.0%
! GCTTGATCCGGTATCGAACC+GGG - chr2_1:72249496-72249515 None:intergenic 55.0%
ACCGGATCAAGCTCAAGCTC+AGG + chr2_1:72249504-72249523 Msa0222820:CDS 55.0%
GCCTGAGCTTGAGCTTGATC+CGG - chr2_1:72249508-72249527 None:intergenic 55.0%
!! AGTACTGGTGGAGGAGAAGG+AGG + chr2_1:72249973-72249992 Msa0222820:CDS 55.0%
TGGAGGAGAAGGAGGAGTTG+TGG + chr2_1:72249981-72250000 Msa0222820:CDS 55.0%
! GGCTGTGATGAGGATAGTGG+TGG - chr2_1:72249448-72249467 None:intergenic 55.0%
TGCACCATGTGGCTGTGATG+AGG - chr2_1:72249458-72249477 None:intergenic 55.0%
TCATCACAGCCACATGGTGC+AGG + chr2_1:72249457-72249476 Msa0222820:CDS 55.0%
GCAGGCTCAATTATCAGGCC+CGG + chr2_1:72249475-72249494 Msa0222820:CDS 55.0%
! TATCAGGCCCGGTTCGATAC+CGG + chr2_1:72249486-72249505 Msa0222820:CDS 55.0%
! GCTTGATCCGGTATCGAACC+GGG - chr2_1:72249496-72249515 None:intergenic 55.0%
ACCGGATCAAGCTCAAGCTC+AGG + chr2_1:72249504-72249523 Msa0222820:CDS 55.0%
GCCTGAGCTTGAGCTTGATC+CGG - chr2_1:72249508-72249527 None:intergenic 55.0%
!! AGTACTGGTGGAGGAGAAGG+AGG + chr2_1:72249973-72249992 Msa0222820:CDS 55.0%
TGGAGGAGAAGGAGGAGTTG+TGG + chr2_1:72249981-72250000 Msa0222820:CDS 55.0%
CTACGACACCCTCCACCAAC+AGG - chr2_1:72249736-72249755 None:intergenic 60.0%
CTACGACACCCTCCACCAAC+AGG - chr2_1:72249736-72249755 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72248994 72250825 72248994 ID=Msa0222820;Name=Msa0222820
chr2_1 mRNA 72248994 72250825 72248994 ID=Msa0222820-mRNA-1;Parent=Msa0222820;Name=Msa0222820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=180|1|1|1|0.5|0.33|3|359|302
chr2_1 exon 72248994 72249224 72248994 ID=Msa0222820-mRNA-1:exon:20878;Parent=Msa0222820-mRNA-1
chr2_1 exon 72249421 72250305 72249421 ID=Msa0222820-mRNA-1:exon:20879;Parent=Msa0222820-mRNA-1
chr2_1 exon 72250494 72250825 72250494 ID=Msa0222820-mRNA-1:exon:20880;Parent=Msa0222820-mRNA-1
chr2_1 five_prime_UTR 72248994 72249173 72248994 ID=Msa0222820-mRNA-1:five_prime_utr;Parent=Msa0222820-mRNA-1
chr2_1 CDS 72249174 72249224 72249174 ID=Msa0222820-mRNA-1:cds;Parent=Msa0222820-mRNA-1
chr2_1 CDS 72249421 72250278 72249421 ID=Msa0222820-mRNA-1:cds;Parent=Msa0222820-mRNA-1
chr2_1 three_prime_UTR 72250279 72250305 72250279 ID=Msa0222820-mRNA-1:three_prime_utr;Parent=Msa0222820-mRNA-1
chr2_1 three_prime_UTR 72250494 72250825 72250494 ID=Msa0222820-mRNA-1:three_prime_utr;Parent=Msa0222820-mRNA-1
Gene Sequence

>Msa0222820

ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAACCAAATCAACATCAGTTGCTTCCACCACTATCCTCATCACAGCCACATGGTGCAGGCTCAATTATCAGGCCCGGTTCGATACCGGATCAAGCTCAAGCTCAGGCAGCTCATGAAGTTCAAACTGGTCATCAGGTTCAAACTCACCAAGCTAAGTTACCACCACCTTCAGAGACAGCTTTGAAGTGTCCTCGTTGTGAATCAACCAACACAAAATTTTGTTACTACAACAACTATAACCTGTCTCAACCAAGACACTTTTGCAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCATTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAGAGTAACACCTCTACTCCCTCAAAATCTCCAATATCAAATAGTAATGAGAAAGATTATTCAACAAGTGCAATCCATTCAACTTCAACTCCTCTTGGTGAATTCTTACACCCAACTAATAGACCTAATTACATGACATCTCTTCAGAATCTGAACCGGTTCGGTGTTGGAAACATGTTTCAAATTGGTGATTATAGTTCAAGTACTGGTGGAGGAGAAGGAGGAGTTGTGGATCAGTGGAGATTTCAGCAGTTTCCTTTCATGAATAATGGTTTTGATTCAAGTACTTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTGTTGAACCAACAACTACTTCTAGGGTTACTACTTTGATGCCTGCATCGGTTAAATCGGAACACAACGGAGGAGGTTTTAATCTGCTTAGATCTCCAATGAATATGTCAGAGAATAACAACCATTACAATAATTCATGGACTGATTTTCATGGTCTTGCATCTTCTTCGGCTAGTCGTCTGTTATAA
Protein sequence

>Msa0222820

MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSSQPHGAGSIIRPGSIPDQAQAQAAHEVQTGHQVQTHQAKLPPPSETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSNTSTPSKSPISNSNEKDYSTSAIHSTSTPLGEFLHPTNRPNYMTSLQNLNRFGVGNMFQIGDYSSSTGGGEGGVVDQWRFQQFPFMNNGFDSSTSNVSFPFQSEIVEPTTTSRVTTLMPASVKSEHNGGGFNLLRSPMNMSENNNHYNNSWTDFHGLASSSASRLL*