AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0339570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339570 MtrunA17_Chr2g0328021 90.850 306 7 6 1 303 1 288 0.0 548
Msa0339570 MtrunA17_Chr4g0031411 42.500 360 115 17 1 297 1 331 2.50e-63 203
Msa0339570 MtrunA17_Chr4g0010151 40.549 328 108 17 1 261 1 308 1.40e-47 163
Msa0339570 MtrunA17_Chr7g0237921 37.818 275 115 6 1 238 1 256 2.70e-43 151
Msa0339570 MtrunA17_Chr7g0223311 52.500 160 45 5 1 146 1 143 7.55e-42 148
Msa0339570 MtrunA17_Chr8g0367161 56.000 100 41 1 55 154 12 108 4.17e-33 124
Msa0339570 MtrunA17_Chr8g0374251 62.069 87 29 1 78 164 68 150 1.74e-32 122
Msa0339570 MtrunA17_Chr3g0117601 52.475 101 48 0 28 128 11 111 2.33e-31 119
Msa0339570 MtrunA17_Chr4g0047001 68.919 74 18 1 79 147 56 129 2.91e-31 120
Msa0339570 MtrunA17_Chr8g0341671 76.119 67 14 1 73 139 15 79 6.53e-31 115
Msa0339570 MtrunA17_Chr2g0326001 64.935 77 27 0 56 132 18 94 1.05e-30 117
Msa0339570 MtrunA17_Chr4g0030051 76.923 65 14 1 67 130 29 93 1.38e-30 116
Msa0339570 MtrunA17_Chr5g0411951 82.143 56 10 0 73 128 38 93 1.76e-30 117
Msa0339570 MtrunA17_Chr3g0127201 71.642 67 19 0 67 133 16 82 1.77e-30 116
Msa0339570 MtrunA17_Chr3g0126201 70.149 67 20 0 68 134 41 107 5.77e-30 115
Msa0339570 MtrunA17_Chr8g0374111 52.000 100 44 2 71 166 22 121 9.39e-30 112
Msa0339570 MtrunA17_Chr4g0061761 86.538 52 7 0 77 128 39 90 1.13e-29 114
Msa0339570 MtrunA17_Chr2g0308011 90.000 50 5 0 77 126 36 85 1.38e-28 109
Msa0339570 MtrunA17_Chr8g0346551 72.581 62 17 0 75 136 21 82 2.47e-28 110
Msa0339570 MtrunA17_Chr2g0282511 75.362 69 17 0 77 145 44 112 3.29e-28 110
Msa0339570 MtrunA17_Chr2g0282441 84.314 51 8 0 79 129 26 76 1.59e-27 109
Msa0339570 MtrunA17_Chr1g0188851 68.333 60 19 0 75 134 40 99 6.28e-27 107
Msa0339570 MtrunA17_Chr2g0282051 50.538 93 27 2 42 134 28 101 8.66e-27 106
Msa0339570 MtrunA17_Chr1g0177251 77.358 53 12 0 80 132 14 66 9.94e-27 106
Msa0339570 MtrunA17_Chr4g0047761 75.862 58 13 1 78 135 72 128 1.92e-26 106
Msa0339570 MtrunA17_Chr5g0417571 44.118 102 57 0 30 131 90 191 5.40e-26 105
Msa0339570 MtrunA17_Chr6g0453321 52.273 88 41 1 44 131 103 189 6.10e-26 107
Msa0339570 MtrunA17_Chr2g0283811 56.410 78 30 1 64 141 37 110 7.68e-26 100
Msa0339570 MtrunA17_Chr8g0355261 51.163 86 42 0 56 141 96 181 1.68e-25 105
Msa0339570 MtrunA17_Chr6g0460721 58.824 68 28 0 65 132 76 143 3.51e-24 100
Msa0339570 MtrunA17_Chr7g0217581 61.538 65 25 0 67 131 221 285 6.47e-24 101
Msa0339570 MtrunA17_Chr7g0254161 59.701 67 27 0 65 131 88 154 8.88e-24 100
Msa0339570 MtrunA17_Chr3g0092111 57.534 73 30 1 59 131 118 189 9.25e-24 100
Msa0339570 MtrunA17_Chr5g0417601 47.778 90 47 0 42 131 104 193 1.19e-23 99.4
Msa0339570 MtrunA17_Chr6g0460731 56.716 67 29 0 65 131 83 149 2.02e-23 98.6
Msa0339570 MtrunA17_Chr4g0042481 64.912 57 20 0 75 131 119 175 5.61e-23 98.6
Msa0339570 MtrunA17_Chr5g0417551 47.126 87 45 1 45 131 95 180 1.38e-21 93.6
Msa0339570 MtrunA17_Chr5g0417561 53.333 75 32 1 57 131 101 172 5.61e-21 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339570 AT3G55370.1 39.275 331 142 15 1 291 1 312 1.26e-48 165
Msa0339570 AT3G55370.2 42.126 254 99 10 1 224 1 236 2.94e-46 159
Msa0339570 AT3G55370.3 37.578 322 143 14 9 291 55 357 4.59e-42 149
Msa0339570 AT2G37590.1 51.351 148 55 4 1 134 1 145 1.54e-40 144
Msa0339570 AT2G28810.1 48.408 157 41 4 1 129 1 145 9.85e-38 137
Msa0339570 AT5G65590.1 72.500 80 17 1 65 139 23 102 8.79e-35 128
Msa0339570 AT5G02460.1 56.303 119 35 2 39 157 73 174 1.37e-34 130
Msa0339570 AT2G28810.2 61.702 94 24 1 36 129 47 128 7.32e-34 126
Msa0339570 AT1G07640.1 73.611 72 18 1 64 135 8 78 2.32e-33 124
Msa0339570 AT5G60200.1 65.333 75 26 0 71 145 48 122 4.70e-33 122
Msa0339570 AT1G07640.2 73.611 72 18 1 64 135 64 134 4.88e-33 124
Msa0339570 AT1G07640.3 73.611 72 18 1 64 135 72 142 7.93e-33 124
Msa0339570 AT1G51700.1 47.934 121 63 0 53 173 8 128 1.53e-32 119
Msa0339570 AT5G60850.1 67.532 77 23 1 77 151 50 126 2.69e-32 122
Msa0339570 AT5G66940.1 56.322 87 38 0 64 150 18 104 1.08e-30 115
Msa0339570 AT3G45610.1 63.889 72 26 0 68 139 30 101 2.84e-30 115
Msa0339570 AT5G62940.1 78.333 60 13 0 69 128 64 123 1.08e-29 116
Msa0339570 AT4G21050.1 57.647 85 33 1 64 148 13 94 1.51e-29 112
Msa0339570 AT2G28510.1 78.333 60 13 0 77 136 47 106 1.61e-29 114
Msa0339570 AT3G21270.1 86.792 53 7 0 78 130 29 81 1.86e-29 111
Msa0339570 AT3G52440.1 63.158 76 28 0 74 149 21 96 2.70e-29 112
Msa0339570 AT3G52440.2 63.158 76 28 0 74 149 40 115 4.08e-29 112
Msa0339570 AT1G28310.1 77.586 58 13 0 78 135 27 84 5.03e-29 113
Msa0339570 AT4G38000.1 73.770 61 16 0 72 132 35 95 7.28e-29 111
Msa0339570 AT1G28310.2 77.586 58 13 0 78 135 51 108 7.81e-29 113
Msa0339570 AT1G21340.1 71.667 60 17 0 76 135 36 95 1.89e-28 110
Msa0339570 AT3G50410.1 74.576 59 15 0 78 136 30 88 8.77e-28 108
Msa0339570 AT4G24060.1 66.667 66 22 0 67 132 42 107 1.35e-27 110
Msa0339570 AT3G61850.2 41.667 144 76 4 22 165 8 143 5.57e-27 107
Msa0339570 AT3G61850.3 41.667 144 76 4 22 165 8 143 5.57e-27 107
Msa0339570 AT3G61850.1 41.667 144 76 4 22 165 20 155 5.81e-27 107
Msa0339570 AT3G61850.5 41.958 143 75 4 23 165 9 143 8.33e-27 107
Msa0339570 AT3G61850.4 41.958 143 75 4 23 165 21 155 9.51e-27 107
Msa0339570 AT1G47655.1 68.182 66 20 1 62 126 12 77 2.50e-26 103
Msa0339570 AT4G00940.1 77.358 53 12 0 80 132 70 122 2.68e-25 102
Msa0339570 AT4G00940.3 77.358 53 12 0 80 132 70 122 2.68e-25 102
Msa0339570 AT4G00940.2 77.358 53 12 0 80 132 70 122 2.68e-25 102
Msa0339570 AT1G64620.1 68.852 61 19 0 67 127 38 98 3.53e-25 103
Msa0339570 AT2G34140.1 70.175 57 17 0 75 131 55 111 7.53e-25 98.6
Msa0339570 AT1G29160.1 70.175 57 17 0 75 131 59 115 1.17e-24 98.2
Msa0339570 AT2G46590.1 78.431 51 11 0 75 125 65 115 2.15e-24 101
Msa0339570 AT2G46590.2 78.431 51 11 0 75 125 77 127 2.31e-24 101
Msa0339570 AT5G39660.3 58.108 74 30 1 58 131 119 191 5.68e-24 101
Msa0339570 AT5G39660.1 58.108 74 30 1 58 131 119 191 5.68e-24 101
Msa0339570 AT5G39660.2 58.108 74 30 1 58 131 119 191 5.68e-24 101
Msa0339570 AT3G47500.1 48.352 91 40 2 47 131 74 163 6.74e-24 101
Msa0339570 AT1G69570.1 63.492 63 23 0 75 137 129 191 2.20e-23 99.4
Msa0339570 AT1G26790.1 56.164 73 29 1 59 131 95 164 2.62e-23 99.0
Msa0339570 AT5G62430.1 47.126 87 43 1 45 131 24 107 3.34e-23 97.4
Msa0339570 AT4G21040.1 59.701 67 23 1 80 146 27 89 1.78e-22 94.0
Msa0339570 AT4G21080.1 61.905 63 20 1 80 142 27 85 1.12e-21 92.0
Msa0339570 AT4G21030.1 49.296 71 32 1 70 140 17 83 1.96e-15 73.9

Find 95 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATGATATCAATATTATT+TGG 0.137554 2_4:+60776882 Msa0339570:three_prime_UTR
TTATGTATTGTGTGAGTTTA+TGG 0.180155 2_4:+60776771 Msa0339570:three_prime_UTR
ATAAAGTTTGATGGCTCTTT+AGG 0.188592 2_4:-60775195 None:intergenic
AACACAAGCATGGTAGTATT+TGG 0.212704 2_4:+60776695 Msa0339570:three_prime_UTR
GCAAGACATGTAGGCGTTAT+TGG 0.219753 2_4:+60775766 Msa0339570:CDS
TTGAACCAACAACTACTTCT+AGG 0.230645 2_4:+60776177 Msa0339570:CDS
TTCTCATTACTATTTGATAT+TGG 0.260955 2_4:-60775885 None:intergenic
CAGTTTCCTTTCATGAATAA+TGG 0.306796 2_4:+60776104 Msa0339570:CDS
TCAACAATTTCACTTTGAAA+TGG 0.326972 2_4:-60776158 None:intergenic
TAAAGTTTGATGGCTCTTTA+GGG 0.328358 2_4:-60775194 None:intergenic
TGAAGAGATGTCATGTAATT+AGG 0.330958 2_4:-60775978 None:intergenic
TTATTCTCTGACATATTCAT+TGG 0.339957 2_4:-60776269 None:intergenic
TTGTCTTTAATAAAGTTTGA+TGG 0.349192 2_4:-60775204 None:intergenic
CAACAATTTCACTTTGAAAT+GGG 0.353913 2_4:-60776157 None:intergenic
TTATGATATCAATATTATTT+GGG 0.362696 2_4:+60776883 Msa0339570:three_prime_UTR
GTTGGAAACATGTTTCAAAT+TGG 0.387187 2_4:+60776020 Msa0339570:CDS
GGAAGCAACTGATGTTGATT+TGG 0.388221 2_4:-60775507 None:intergenic
AGCTTGATCCGGTATCGAAC+CGG 0.392442 2_4:-60775577 None:intergenic
TCATGGTCTTGCATCTTCTT+CGG 0.406074 2_4:+60776325 Msa0339570:CDS
CAAGAGGAGTTGAAGTTGAA+TGG 0.407718 2_4:-60775929 None:intergenic
ATGGTGCAGGCTCAATTATC+AGG 0.408827 2_4:+60775553 Msa0339570:CDS
GATGCCTGCATCGGTTAAAT+CGG 0.412501 2_4:+60776211 Msa0339570:CDS
TGTAATTAGGTCTATTAGTT+GGG 0.420123 2_4:-60775965 None:intergenic
ATCCAGGGCATCATCTTTGA+TGG 0.425201 2_4:+60776574 Msa0339570:intron
ATGTAATTAGGTCTATTAGT+TGG 0.434589 2_4:-60775966 None:intergenic
CTTATTTAGATCCTCTCAAT+TGG 0.441172 2_4:+60775279 Msa0339570:CDS
ATCGTTTGCACTGCTAGAAA+AGG 0.445327 2_4:+60776370 Msa0339570:three_prime_UTR
CATTCAACTTCAACTCCTCT+TGG 0.446006 2_4:+60775930 Msa0339570:CDS
ATAAAGCATTAAAGTGAAGA+TGG 0.447249 2_4:-60775123 None:intergenic
TGAAGTTCAAACTGGTCATC+AGG 0.450714 2_4:+60775617 Msa0339570:CDS
TATCAGGCCCGGTTCGATAC+CGG 0.455922 2_4:+60775569 Msa0339570:CDS
CTACGACACCCTCCACCAAC+AGG 0.460856 2_4:-60775816 None:intergenic
AAAAGTGTCTTGGTTGAGAC+AGG 0.461945 2_4:-60775743 None:intergenic
TTGAGAGGATCTAAATAAGA+TGG 0.471759 2_4:-60775275 None:intergenic
ACATGTTTCCAACACCGAAC+CGG 0.484940 2_4:-60776010 None:intergenic
TGTAAATCATGTTGTTCAGC+TGG 0.485690 2_4:-60776620 None:intergenic
GGTGATTATAGTTCAAGTAC+TGG 0.489772 2_4:+60776041 Msa0339570:CDS
TTGATGGCTCTTTAGGGAGA+TGG 0.494870 2_4:-60775188 None:intergenic
TGAACCAACAACTACTTCTA+GGG 0.497338 2_4:+60776178 Msa0339570:CDS
GCCTGAGCTTGAGCTTGATC+CGG 0.498212 2_4:-60775588 None:intergenic
TGTTCCGATTTAACCGATGC+AGG 0.498710 2_4:-60776215 None:intergenic
GCAGCTCATGAAGTTCAAAC+TGG 0.502505 2_4:+60775609 Msa0339570:CDS
CTTCAGAATCTGAACCGGTT+CGG 0.507338 2_4:+60775996 Msa0339570:CDS
CATCTCTTCAGAATCTGAAC+CGG 0.507412 2_4:+60775991 Msa0339570:CDS
AATCTGAACCGGTTCGGTGT+TGG 0.507539 2_4:+60776002 Msa0339570:CDS
GGTGGAGAATCACACTATAG+TGG 0.510978 2_4:-60775167 None:intergenic
TCTTCGAATGGCGAAAATCA+AGG 0.513934 2_4:+60776653 Msa0339570:three_prime_UTR
TACTACTTTGATGCCTGCAT+CGG 0.514344 2_4:+60776202 Msa0339570:CDS
GTAACCCTAGAAGTAGTTGT+TGG 0.518165 2_4:-60776182 None:intergenic
TTAAGAAATGTTCCTGTTGG+TGG 0.525025 2_4:+60775804 Msa0339570:CDS
ACCATTACAATAATTCATCA+TGG 0.529637 2_4:+60776294 Msa0339570:CDS
ACCGGATCAAGCTCAAGCTC+AGG 0.531426 2_4:+60775587 Msa0339570:CDS
ATTAAAGTGAAGATGGAGGA+AGG 0.533160 2_4:-60775116 None:intergenic
CATGTCTTGCAAAAGTGTCT+TGG 0.535988 2_4:-60775753 None:intergenic
TCATCACAGCCACATGGTGC+AGG 0.545230 2_4:+60775540 Msa0339570:CDS
TCAAAACCATTATTCATGAA+AGG 0.546534 2_4:-60776110 None:intergenic
TCCATGATGAATTATTGTAA+TGG 0.550629 2_4:-60776295 None:intergenic
CACTTCAAAGCTGTCTCTGA+AGG 0.551798 2_4:-60775669 None:intergenic
TGGAGGAGACGGAGGAGTTG+TGG 0.552898 2_4:+60776064 Msa0339570:CDS
ATGGCTCTTTAGGGAGATGG+TGG 0.554378 2_4:-60775185 None:intergenic
AGAAATGTTCCTGTTGGTGG+AGG 0.558097 2_4:+60775807 Msa0339570:CDS
CAAGTTGCACTATCTTCGAA+TGG 0.559769 2_4:+60776641 Msa0339570:three_prime_UTR
TCAAGTACTGGTGGAGGAGA+CGG 0.565030 2_4:+60776053 Msa0339570:CDS
ACGGAGGAGTTGTGGATCAG+TGG 0.567099 2_4:+60776072 Msa0339570:CDS
CTTACTTGCTGCCAATTGAG+AGG 0.568314 2_4:-60775290 None:intergenic
AAATCGGAACACAACGGAGG+AGG 0.573191 2_4:+60776227 Msa0339570:CDS
GCATTAAGAAATGTTCCTGT+TGG 0.573758 2_4:+60775801 Msa0339570:CDS
GCTTGATCCGGTATCGAACC+GGG 0.575393 2_4:-60775576 None:intergenic
GCAGGCTCAATTATCAGGCC+CGG 0.575596 2_4:+60775558 Msa0339570:CDS
AAGGTGGTGGTAACTTAGCT+TGG 0.577015 2_4:-60775650 None:intergenic
AAAGCTGTCTCTGAAGGTGG+TGG 0.586444 2_4:-60775663 None:intergenic
TATAGTTCAAGTACTGGTGG+AGG 0.593548 2_4:+60776047 Msa0339570:CDS
GATTATAGTTCAAGTACTGG+TGG 0.600312 2_4:+60776044 Msa0339570:CDS
GTAGGCGTTATTGGACAAGA+GGG 0.605161 2_4:+60775775 Msa0339570:CDS
AAGCATTAAAGTGAAGATGG+AGG 0.608260 2_4:-60775120 None:intergenic
AAAAGAAATAAACACAAGCA+TGG 0.611926 2_4:+60776685 Msa0339570:three_prime_UTR
TGTGGCTGTGATGAGGATAG+TGG 0.611946 2_4:-60775531 None:intergenic
TGTAGGCGTTATTGGACAAG+AGG 0.616737 2_4:+60775774 Msa0339570:CDS
TTCAAAGCTGTCTCTGAAGG+TGG 0.619079 2_4:-60775666 None:intergenic
AAAGTGAAGATGGAGGAAGG+AGG 0.625356 2_4:-60775113 None:intergenic
GAAATGTTCCTGTTGGTGGA+GGG 0.644271 2_4:+60775808 Msa0339570:CDS
CTATCCTCATCACAGCCACA+TGG 0.646501 2_4:+60775534 Msa0339570:CDS
GGCTGTGATGAGGATAGTGG+TGG 0.646948 2_4:-60775528 None:intergenic
GGAAGGAGGAAAGCAAGAAG+AGG 0.648563 2_4:-60775099 None:intergenic
TGCACCATGTGGCTGTGATG+AGG 0.663808 2_4:-60775538 None:intergenic
TAGGCGTTATTGGACAAGAG+GGG 0.675252 2_4:+60775776 Msa0339570:CDS
AGGCGTTATTGGACAAGAGG+GGG 0.675862 2_4:+60775777 Msa0339570:CDS
ATAATTGAGCCTGCACCATG+TGG 0.676504 2_4:-60775549 None:intergenic
AGTACTGGTGGAGGAGACGG+AGG 0.688303 2_4:+60776056 Msa0339570:CDS
CGCAAAAGGATTGAACACCA+TGG 0.701433 2_4:+60775238 Msa0339570:exon
TGGAATAGAAGAGAAAACCA+TGG 0.712223 2_4:-60775255 None:intergenic
GGGTGTAAGAATTCACCAAG+AGG 0.726422 2_4:-60775945 None:intergenic
GTGTTGGTTGATTCACAACG+AGG 0.729681 2_4:-60775693 None:intergenic
GTTAAATCGGAACACAACGG+AGG 0.733463 2_4:+60776224 Msa0339570:CDS
TCGGTTAAATCGGAACACAA+CGG 0.745806 2_4:+60776221 Msa0339570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGATATCAATATTATTT+GGG + chr2_4:60776883-60776902 Msa0339570:three_prime_UTR 10.0%
!! TTATGATATCAATATTATTT+GGG + chr2_4:60776883-60776902 Msa0339570:three_prime_UTR 10.0%
!! TATTATTATTACAAAGGAAT+AGG - chr2_4:60775362-60775381 None:intergenic 15.0%
!! AGAAGATATTATTATTACAA+AGG - chr2_4:60775368-60775387 None:intergenic 15.0%
!! GTTATGATATCAATATTATT+TGG + chr2_4:60776882-60776901 Msa0339570:three_prime_UTR 15.0%
!! TATTATTATTACAAAGGAAT+AGG - chr2_4:60775362-60775381 None:intergenic 15.0%
!! AGAAGATATTATTATTACAA+AGG - chr2_4:60775368-60775387 None:intergenic 15.0%
!! GTTATGATATCAATATTATT+TGG + chr2_4:60776882-60776901 Msa0339570:three_prime_UTR 15.0%
!! TTGTCTTTAATAAAGTTTGA+TGG - chr2_4:60775207-60775226 None:intergenic 20.0%
!! CAAAAAAATAAAAACGCAAA+AGG + chr2_4:60775224-60775243 Msa0339570:five_prime_UTR 20.0%
!!! TAAATAAATTCACTCTTTTG+TGG - chr2_4:60775337-60775356 None:intergenic 20.0%
!! TCATATATAGATATATCACA+AGG - chr2_4:60775459-60775478 None:intergenic 20.0%
!! TTCTCATTACTATTTGATAT+TGG - chr2_4:60775888-60775907 None:intergenic 20.0%
!! TTGTCTTTAATAAAGTTTGA+TGG - chr2_4:60775207-60775226 None:intergenic 20.0%
!! CAAAAAAATAAAAACGCAAA+AGG + chr2_4:60775224-60775243 Msa0339570:five_prime_UTR 20.0%
!!! TAAATAAATTCACTCTTTTG+TGG - chr2_4:60775337-60775356 None:intergenic 20.0%
!! TCATATATAGATATATCACA+AGG - chr2_4:60775459-60775478 None:intergenic 20.0%
!! TTCTCATTACTATTTGATAT+TGG - chr2_4:60775888-60775907 None:intergenic 20.0%
!! ATAAAGCATTAAAGTGAAGA+TGG - chr2_4:60775126-60775145 None:intergenic 25.0%
! TGTAATGAAAAAAAATCTGC+AGG - chr2_4:60775399-60775418 None:intergenic 25.0%
!! GTAGTAACAAAATTTTGTGT+TGG - chr2_4:60775712-60775731 None:intergenic 25.0%
!! TTTGATATTGGAGATTTTGA+GGG - chr2_4:60775876-60775895 None:intergenic 25.0%
!! ATTTGATATTGGAGATTTTG+AGG - chr2_4:60775877-60775896 None:intergenic 25.0%
! TGTAATTAGGTCTATTAGTT+GGG - chr2_4:60775968-60775987 None:intergenic 25.0%
! ATGTAATTAGGTCTATTAGT+TGG - chr2_4:60775969-60775988 None:intergenic 25.0%
! TCAAAACCATTATTCATGAA+AGG - chr2_4:60776113-60776132 None:intergenic 25.0%
!!! CAACAATTTCACTTTGAAAT+GGG - chr2_4:60776160-60776179 None:intergenic 25.0%
!! TCAACAATTTCACTTTGAAA+TGG - chr2_4:60776161-60776180 None:intergenic 25.0%
! TTATTCTCTGACATATTCAT+TGG - chr2_4:60776272-60776291 None:intergenic 25.0%
! ACCATTACAATAATTCATCA+TGG + chr2_4:60776294-60776313 Msa0339570:CDS 25.0%
! TCCATGATGAATTATTGTAA+TGG - chr2_4:60776298-60776317 None:intergenic 25.0%
! ATACTTAGAGATGAAATTAG+AGG + chr2_4:60776463-60776482 Msa0339570:intron 25.0%
! AAAAGAAATAAACACAAGCA+TGG + chr2_4:60776685-60776704 Msa0339570:three_prime_UTR 25.0%
! TTATGTATTGTGTGAGTTTA+TGG + chr2_4:60776771-60776790 Msa0339570:three_prime_UTR 25.0%
!!! CTTTATCTTGTTTTTCTTTG+TGG - chr2_4:60775079-60775098 None:intergenic 25.0%
!! ATAAAGCATTAAAGTGAAGA+TGG - chr2_4:60775126-60775145 None:intergenic 25.0%
! TGTAATGAAAAAAAATCTGC+AGG - chr2_4:60775399-60775418 None:intergenic 25.0%
!! GTAGTAACAAAATTTTGTGT+TGG - chr2_4:60775712-60775731 None:intergenic 25.0%
!! TTTGATATTGGAGATTTTGA+GGG - chr2_4:60775876-60775895 None:intergenic 25.0%
!! ATTTGATATTGGAGATTTTG+AGG - chr2_4:60775877-60775896 None:intergenic 25.0%
! TGTAATTAGGTCTATTAGTT+GGG - chr2_4:60775968-60775987 None:intergenic 25.0%
! ATGTAATTAGGTCTATTAGT+TGG - chr2_4:60775969-60775988 None:intergenic 25.0%
! TCAAAACCATTATTCATGAA+AGG - chr2_4:60776113-60776132 None:intergenic 25.0%
!!! CAACAATTTCACTTTGAAAT+GGG - chr2_4:60776160-60776179 None:intergenic 25.0%
!! TCAACAATTTCACTTTGAAA+TGG - chr2_4:60776161-60776180 None:intergenic 25.0%
! TTATTCTCTGACATATTCAT+TGG - chr2_4:60776272-60776291 None:intergenic 25.0%
! ACCATTACAATAATTCATCA+TGG + chr2_4:60776294-60776313 Msa0339570:CDS 25.0%
! TCCATGATGAATTATTGTAA+TGG - chr2_4:60776298-60776317 None:intergenic 25.0%
! ATACTTAGAGATGAAATTAG+AGG + chr2_4:60776463-60776482 Msa0339570:intron 25.0%
! AAAAGAAATAAACACAAGCA+TGG + chr2_4:60776685-60776704 Msa0339570:three_prime_UTR 25.0%
! TTATGTATTGTGTGAGTTTA+TGG + chr2_4:60776771-60776790 Msa0339570:three_prime_UTR 25.0%
! TAAAGTTTGATGGCTCTTTA+GGG - chr2_4:60775197-60775216 None:intergenic 30.0%
! ATAAAGTTTGATGGCTCTTT+AGG - chr2_4:60775198-60775217 None:intergenic 30.0%
TTGAGAGGATCTAAATAAGA+TGG - chr2_4:60775278-60775297 None:intergenic 30.0%
CTTATTTAGATCCTCTCAAT+TGG + chr2_4:60775279-60775298 Msa0339570:CDS 30.0%
TATCACAAGGTTACAAGAAA+GGG - chr2_4:60775446-60775465 None:intergenic 30.0%
ATATCACAAGGTTACAAGAA+AGG - chr2_4:60775447-60775466 None:intergenic 30.0%
TGAAGAGATGTCATGTAATT+AGG - chr2_4:60775981-60776000 None:intergenic 30.0%
GTTGGAAACATGTTTCAAAT+TGG + chr2_4:60776020-60776039 Msa0339570:CDS 30.0%
CAGTTTCCTTTCATGAATAA+TGG + chr2_4:60776104-60776123 Msa0339570:CDS 30.0%
GCTAGAAAAGGTTGAATTAT+TGG + chr2_4:60776382-60776401 Msa0339570:intron 30.0%
CATCTCTAAGTATAAGTTAG+AGG - chr2_4:60776456-60776475 None:intergenic 30.0%
TATCATCAGTTATCAAATCC+AGG + chr2_4:60776558-60776577 Msa0339570:intron 30.0%
ATCATCAGTTATCAAATCCA+GGG + chr2_4:60776559-60776578 Msa0339570:intron 30.0%
! TAAAGTTTGATGGCTCTTTA+GGG - chr2_4:60775197-60775216 None:intergenic 30.0%
! ATAAAGTTTGATGGCTCTTT+AGG - chr2_4:60775198-60775217 None:intergenic 30.0%
TTGAGAGGATCTAAATAAGA+TGG - chr2_4:60775278-60775297 None:intergenic 30.0%
CTTATTTAGATCCTCTCAAT+TGG + chr2_4:60775279-60775298 Msa0339570:CDS 30.0%
TATCACAAGGTTACAAGAAA+GGG - chr2_4:60775446-60775465 None:intergenic 30.0%
ATATCACAAGGTTACAAGAA+AGG - chr2_4:60775447-60775466 None:intergenic 30.0%
TGAAGAGATGTCATGTAATT+AGG - chr2_4:60775981-60776000 None:intergenic 30.0%
GTTGGAAACATGTTTCAAAT+TGG + chr2_4:60776020-60776039 Msa0339570:CDS 30.0%
CAGTTTCCTTTCATGAATAA+TGG + chr2_4:60776104-60776123 Msa0339570:CDS 30.0%
GCTAGAAAAGGTTGAATTAT+TGG + chr2_4:60776382-60776401 Msa0339570:intron 30.0%
CATCTCTAAGTATAAGTTAG+AGG - chr2_4:60776456-60776475 None:intergenic 30.0%
TATCATCAGTTATCAAATCC+AGG + chr2_4:60776558-60776577 Msa0339570:intron 30.0%
ATCATCAGTTATCAAATCCA+GGG + chr2_4:60776559-60776578 Msa0339570:intron 30.0%
ATTAAAGTGAAGATGGAGGA+AGG - chr2_4:60775119-60775138 None:intergenic 35.0%
AAGCATTAAAGTGAAGATGG+AGG - chr2_4:60775123-60775142 None:intergenic 35.0%
TGGAATAGAAGAGAAAACCA+TGG - chr2_4:60775258-60775277 None:intergenic 35.0%
GCATTAAGAAATGTTCCTGT+TGG + chr2_4:60775801-60775820 Msa0339570:CDS 35.0%
TTAAGAAATGTTCCTGTTGG+TGG + chr2_4:60775804-60775823 Msa0339570:CDS 35.0%
!!! AGTAGAGGTGTTACTCTTTT+TGG - chr2_4:60775853-60775872 None:intergenic 35.0%
GGTGATTATAGTTCAAGTAC+TGG + chr2_4:60776041-60776060 Msa0339570:CDS 35.0%
!! GATTATAGTTCAAGTACTGG+TGG + chr2_4:60776044-60776063 Msa0339570:CDS 35.0%
TTGAACCAACAACTACTTCT+AGG + chr2_4:60776177-60776196 Msa0339570:CDS 35.0%
TGAACCAACAACTACTTCTA+GGG + chr2_4:60776178-60776197 Msa0339570:CDS 35.0%
!! TCATCATGGACTGATTTTCA+TGG + chr2_4:60776308-60776327 Msa0339570:CDS 35.0%
TGTAAATCATGTTGTTCAGC+TGG - chr2_4:60776623-60776642 None:intergenic 35.0%
AACACAAGCATGGTAGTATT+TGG + chr2_4:60776695-60776714 Msa0339570:three_prime_UTR 35.0%
ATTAAAGTGAAGATGGAGGA+AGG - chr2_4:60775119-60775138 None:intergenic 35.0%
AAGCATTAAAGTGAAGATGG+AGG - chr2_4:60775123-60775142 None:intergenic 35.0%
TGGAATAGAAGAGAAAACCA+TGG - chr2_4:60775258-60775277 None:intergenic 35.0%
GCATTAAGAAATGTTCCTGT+TGG + chr2_4:60775801-60775820 Msa0339570:CDS 35.0%
TTAAGAAATGTTCCTGTTGG+TGG + chr2_4:60775804-60775823 Msa0339570:CDS 35.0%
!!! AGTAGAGGTGTTACTCTTTT+TGG - chr2_4:60775853-60775872 None:intergenic 35.0%
GGTGATTATAGTTCAAGTAC+TGG + chr2_4:60776041-60776060 Msa0339570:CDS 35.0%
!! GATTATAGTTCAAGTACTGG+TGG + chr2_4:60776044-60776063 Msa0339570:CDS 35.0%
TTGAACCAACAACTACTTCT+AGG + chr2_4:60776177-60776196 Msa0339570:CDS 35.0%
TGAACCAACAACTACTTCTA+GGG + chr2_4:60776178-60776197 Msa0339570:CDS 35.0%
!! TCATCATGGACTGATTTTCA+TGG + chr2_4:60776308-60776327 Msa0339570:CDS 35.0%
TGTAAATCATGTTGTTCAGC+TGG - chr2_4:60776623-60776642 None:intergenic 35.0%
AACACAAGCATGGTAGTATT+TGG + chr2_4:60776695-60776714 Msa0339570:three_prime_UTR 35.0%
! GGAAGCAACTGATGTTGATT+TGG - chr2_4:60775510-60775529 None:intergenic 40.0%
TGAAGTTCAAACTGGTCATC+AGG + chr2_4:60775617-60775636 Msa0339570:CDS 40.0%
!! AAAAGTGTCTTGGTTGAGAC+AGG - chr2_4:60775746-60775765 None:intergenic 40.0%
!! CATGTCTTGCAAAAGTGTCT+TGG - chr2_4:60775756-60775775 None:intergenic 40.0%
! GACACTTTTGCAAGACATGT+AGG + chr2_4:60775757-60775776 Msa0339570:CDS 40.0%
CAAGAGGAGTTGAAGTTGAA+TGG - chr2_4:60775932-60775951 None:intergenic 40.0%
CATTCAACTTCAACTCCTCT+TGG + chr2_4:60775930-60775949 Msa0339570:CDS 40.0%
CATCTCTTCAGAATCTGAAC+CGG + chr2_4:60775991-60776010 Msa0339570:CDS 40.0%
!! TATAGTTCAAGTACTGGTGG+AGG + chr2_4:60776047-60776066 Msa0339570:CDS 40.0%
GTAACCCTAGAAGTAGTTGT+TGG - chr2_4:60776185-60776204 None:intergenic 40.0%
TACTACTTTGATGCCTGCAT+CGG + chr2_4:60776202-60776221 Msa0339570:CDS 40.0%
TCGGTTAAATCGGAACACAA+CGG + chr2_4:60776221-60776240 Msa0339570:CDS 40.0%
! TCATGGTCTTGCATCTTCTT+CGG + chr2_4:60776325-60776344 Msa0339570:CDS 40.0%
ATCGTTTGCACTGCTAGAAA+AGG + chr2_4:60776370-60776389 Msa0339570:three_prime_UTR 40.0%
CAAGTTGCACTATCTTCGAA+TGG + chr2_4:60776641-60776660 Msa0339570:three_prime_UTR 40.0%
TCTTCGAATGGCGAAAATCA+AGG + chr2_4:60776653-60776672 Msa0339570:three_prime_UTR 40.0%
! GGAAGCAACTGATGTTGATT+TGG - chr2_4:60775510-60775529 None:intergenic 40.0%
TGAAGTTCAAACTGGTCATC+AGG + chr2_4:60775617-60775636 Msa0339570:CDS 40.0%
!! AAAAGTGTCTTGGTTGAGAC+AGG - chr2_4:60775746-60775765 None:intergenic 40.0%
!! CATGTCTTGCAAAAGTGTCT+TGG - chr2_4:60775756-60775775 None:intergenic 40.0%
! GACACTTTTGCAAGACATGT+AGG + chr2_4:60775757-60775776 Msa0339570:CDS 40.0%
CAAGAGGAGTTGAAGTTGAA+TGG - chr2_4:60775932-60775951 None:intergenic 40.0%
CATTCAACTTCAACTCCTCT+TGG + chr2_4:60775930-60775949 Msa0339570:CDS 40.0%
CATCTCTTCAGAATCTGAAC+CGG + chr2_4:60775991-60776010 Msa0339570:CDS 40.0%
!! TATAGTTCAAGTACTGGTGG+AGG + chr2_4:60776047-60776066 Msa0339570:CDS 40.0%
GTAACCCTAGAAGTAGTTGT+TGG - chr2_4:60776185-60776204 None:intergenic 40.0%
TACTACTTTGATGCCTGCAT+CGG + chr2_4:60776202-60776221 Msa0339570:CDS 40.0%
TCGGTTAAATCGGAACACAA+CGG + chr2_4:60776221-60776240 Msa0339570:CDS 40.0%
! TCATGGTCTTGCATCTTCTT+CGG + chr2_4:60776325-60776344 Msa0339570:CDS 40.0%
ATCGTTTGCACTGCTAGAAA+AGG + chr2_4:60776370-60776389 Msa0339570:three_prime_UTR 40.0%
CAAGTTGCACTATCTTCGAA+TGG + chr2_4:60776641-60776660 Msa0339570:three_prime_UTR 40.0%
TCTTCGAATGGCGAAAATCA+AGG + chr2_4:60776653-60776672 Msa0339570:three_prime_UTR 40.0%
AAAGTGAAGATGGAGGAAGG+AGG - chr2_4:60775116-60775135 None:intergenic 45.0%
GGTGGAGAATCACACTATAG+TGG - chr2_4:60775170-60775189 None:intergenic 45.0%
! TTGATGGCTCTTTAGGGAGA+TGG - chr2_4:60775191-60775210 None:intergenic 45.0%
CGCAAAAGGATTGAACACCA+TGG + chr2_4:60775238-60775257 Msa0339570:exon 45.0%
! CTTACTTGCTGCCAATTGAG+AGG - chr2_4:60775293-60775312 None:intergenic 45.0%
ATAATTGAGCCTGCACCATG+TGG - chr2_4:60775552-60775571 None:intergenic 45.0%
ATGGTGCAGGCTCAATTATC+AGG + chr2_4:60775553-60775572 Msa0339570:CDS 45.0%
GCAGCTCATGAAGTTCAAAC+TGG + chr2_4:60775609-60775628 Msa0339570:CDS 45.0%
! AAGGTGGTGGTAACTTAGCT+TGG - chr2_4:60775653-60775672 None:intergenic 45.0%
! TTCAAAGCTGTCTCTGAAGG+TGG - chr2_4:60775669-60775688 None:intergenic 45.0%
CACTTCAAAGCTGTCTCTGA+AGG - chr2_4:60775672-60775691 None:intergenic 45.0%
!! GTGTTGGTTGATTCACAACG+AGG - chr2_4:60775696-60775715 None:intergenic 45.0%
GCAAGACATGTAGGCGTTAT+TGG + chr2_4:60775766-60775785 Msa0339570:CDS 45.0%
TGTAGGCGTTATTGGACAAG+AGG + chr2_4:60775774-60775793 Msa0339570:CDS 45.0%
GTAGGCGTTATTGGACAAGA+GGG + chr2_4:60775775-60775794 Msa0339570:CDS 45.0%
TAGGCGTTATTGGACAAGAG+GGG + chr2_4:60775776-60775795 Msa0339570:CDS 45.0%
! AGAAATGTTCCTGTTGGTGG+AGG + chr2_4:60775807-60775826 Msa0339570:CDS 45.0%
! GAAATGTTCCTGTTGGTGGA+GGG + chr2_4:60775808-60775827 Msa0339570:CDS 45.0%
!! TGGAGATTTTGAGGGAGTAG+AGG - chr2_4:60775868-60775887 None:intergenic 45.0%
GGGTGTAAGAATTCACCAAG+AGG - chr2_4:60775948-60775967 None:intergenic 45.0%
CTTCAGAATCTGAACCGGTT+CGG + chr2_4:60775996-60776015 Msa0339570:CDS 45.0%
ACATGTTTCCAACACCGAAC+CGG - chr2_4:60776013-60776032 None:intergenic 45.0%
!! GATGCCTGCATCGGTTAAAT+CGG + chr2_4:60776211-60776230 Msa0339570:CDS 45.0%
TGTTCCGATTTAACCGATGC+AGG - chr2_4:60776218-60776237 None:intergenic 45.0%
GTTAAATCGGAACACAACGG+AGG + chr2_4:60776224-60776243 Msa0339570:CDS 45.0%
! ATCCAGGGCATCATCTTTGA+TGG + chr2_4:60776574-60776593 Msa0339570:intron 45.0%
ATCCATCAAAGATGATGCCC+TGG - chr2_4:60776579-60776598 None:intergenic 45.0%
AAAGTGAAGATGGAGGAAGG+AGG - chr2_4:60775116-60775135 None:intergenic 45.0%
GGTGGAGAATCACACTATAG+TGG - chr2_4:60775170-60775189 None:intergenic 45.0%
! TTGATGGCTCTTTAGGGAGA+TGG - chr2_4:60775191-60775210 None:intergenic 45.0%
CGCAAAAGGATTGAACACCA+TGG + chr2_4:60775238-60775257 Msa0339570:exon 45.0%
! CTTACTTGCTGCCAATTGAG+AGG - chr2_4:60775293-60775312 None:intergenic 45.0%
ATAATTGAGCCTGCACCATG+TGG - chr2_4:60775552-60775571 None:intergenic 45.0%
ATGGTGCAGGCTCAATTATC+AGG + chr2_4:60775553-60775572 Msa0339570:CDS 45.0%
GCAGCTCATGAAGTTCAAAC+TGG + chr2_4:60775609-60775628 Msa0339570:CDS 45.0%
! AAGGTGGTGGTAACTTAGCT+TGG - chr2_4:60775653-60775672 None:intergenic 45.0%
! TTCAAAGCTGTCTCTGAAGG+TGG - chr2_4:60775669-60775688 None:intergenic 45.0%
CACTTCAAAGCTGTCTCTGA+AGG - chr2_4:60775672-60775691 None:intergenic 45.0%
!! GTGTTGGTTGATTCACAACG+AGG - chr2_4:60775696-60775715 None:intergenic 45.0%
GCAAGACATGTAGGCGTTAT+TGG + chr2_4:60775766-60775785 Msa0339570:CDS 45.0%
TGTAGGCGTTATTGGACAAG+AGG + chr2_4:60775774-60775793 Msa0339570:CDS 45.0%
GTAGGCGTTATTGGACAAGA+GGG + chr2_4:60775775-60775794 Msa0339570:CDS 45.0%
TAGGCGTTATTGGACAAGAG+GGG + chr2_4:60775776-60775795 Msa0339570:CDS 45.0%
! AGAAATGTTCCTGTTGGTGG+AGG + chr2_4:60775807-60775826 Msa0339570:CDS 45.0%
! GAAATGTTCCTGTTGGTGGA+GGG + chr2_4:60775808-60775827 Msa0339570:CDS 45.0%
!! TGGAGATTTTGAGGGAGTAG+AGG - chr2_4:60775868-60775887 None:intergenic 45.0%
GGGTGTAAGAATTCACCAAG+AGG - chr2_4:60775948-60775967 None:intergenic 45.0%
CTTCAGAATCTGAACCGGTT+CGG + chr2_4:60775996-60776015 Msa0339570:CDS 45.0%
ACATGTTTCCAACACCGAAC+CGG - chr2_4:60776013-60776032 None:intergenic 45.0%
!! GATGCCTGCATCGGTTAAAT+CGG + chr2_4:60776211-60776230 Msa0339570:CDS 45.0%
TGTTCCGATTTAACCGATGC+AGG - chr2_4:60776218-60776237 None:intergenic 45.0%
GTTAAATCGGAACACAACGG+AGG + chr2_4:60776224-60776243 Msa0339570:CDS 45.0%
! ATCCAGGGCATCATCTTTGA+TGG + chr2_4:60776574-60776593 Msa0339570:intron 45.0%
ATCCATCAAAGATGATGCCC+TGG - chr2_4:60776579-60776598 None:intergenic 45.0%
GGAAGGAGGAAAGCAAGAAG+AGG - chr2_4:60775102-60775121 None:intergenic 50.0%
! ATGGCTCTTTAGGGAGATGG+TGG - chr2_4:60775188-60775207 None:intergenic 50.0%
TGTGGCTGTGATGAGGATAG+TGG - chr2_4:60775534-60775553 None:intergenic 50.0%
CTATCCTCATCACAGCCACA+TGG + chr2_4:60775534-60775553 Msa0339570:CDS 50.0%
! AGCTTGATCCGGTATCGAAC+CGG - chr2_4:60775580-60775599 None:intergenic 50.0%
! AAAGCTGTCTCTGAAGGTGG+TGG - chr2_4:60775666-60775685 None:intergenic 50.0%
AGGCGTTATTGGACAAGAGG+GGG + chr2_4:60775777-60775796 Msa0339570:CDS 50.0%
!! AATCTGAACCGGTTCGGTGT+TGG + chr2_4:60776002-60776021 Msa0339570:CDS 50.0%
!! TCAAGTACTGGTGGAGGAGA+CGG + chr2_4:60776053-60776072 Msa0339570:CDS 50.0%
AAATCGGAACACAACGGAGG+AGG + chr2_4:60776227-60776246 Msa0339570:CDS 50.0%
GGAAGGAGGAAAGCAAGAAG+AGG - chr2_4:60775102-60775121 None:intergenic 50.0%
! ATGGCTCTTTAGGGAGATGG+TGG - chr2_4:60775188-60775207 None:intergenic 50.0%
TGTGGCTGTGATGAGGATAG+TGG - chr2_4:60775534-60775553 None:intergenic 50.0%
CTATCCTCATCACAGCCACA+TGG + chr2_4:60775534-60775553 Msa0339570:CDS 50.0%
! AGCTTGATCCGGTATCGAAC+CGG - chr2_4:60775580-60775599 None:intergenic 50.0%
! AAAGCTGTCTCTGAAGGTGG+TGG - chr2_4:60775666-60775685 None:intergenic 50.0%
AGGCGTTATTGGACAAGAGG+GGG + chr2_4:60775777-60775796 Msa0339570:CDS 50.0%
!! AATCTGAACCGGTTCGGTGT+TGG + chr2_4:60776002-60776021 Msa0339570:CDS 50.0%
!! TCAAGTACTGGTGGAGGAGA+CGG + chr2_4:60776053-60776072 Msa0339570:CDS 50.0%
AAATCGGAACACAACGGAGG+AGG + chr2_4:60776227-60776246 Msa0339570:CDS 50.0%
! GGCTGTGATGAGGATAGTGG+TGG - chr2_4:60775531-60775550 None:intergenic 55.0%
TGCACCATGTGGCTGTGATG+AGG - chr2_4:60775541-60775560 None:intergenic 55.0%
TCATCACAGCCACATGGTGC+AGG + chr2_4:60775540-60775559 Msa0339570:CDS 55.0%
GCAGGCTCAATTATCAGGCC+CGG + chr2_4:60775558-60775577 Msa0339570:CDS 55.0%
! TATCAGGCCCGGTTCGATAC+CGG + chr2_4:60775569-60775588 Msa0339570:CDS 55.0%
! GCTTGATCCGGTATCGAACC+GGG - chr2_4:60775579-60775598 None:intergenic 55.0%
ACCGGATCAAGCTCAAGCTC+AGG + chr2_4:60775587-60775606 Msa0339570:CDS 55.0%
GCCTGAGCTTGAGCTTGATC+CGG - chr2_4:60775591-60775610 None:intergenic 55.0%
ACGGAGGAGTTGTGGATCAG+TGG + chr2_4:60776072-60776091 Msa0339570:CDS 55.0%
! GGCTGTGATGAGGATAGTGG+TGG - chr2_4:60775531-60775550 None:intergenic 55.0%
TGCACCATGTGGCTGTGATG+AGG - chr2_4:60775541-60775560 None:intergenic 55.0%
TCATCACAGCCACATGGTGC+AGG + chr2_4:60775540-60775559 Msa0339570:CDS 55.0%
GCAGGCTCAATTATCAGGCC+CGG + chr2_4:60775558-60775577 Msa0339570:CDS 55.0%
! TATCAGGCCCGGTTCGATAC+CGG + chr2_4:60775569-60775588 Msa0339570:CDS 55.0%
! GCTTGATCCGGTATCGAACC+GGG - chr2_4:60775579-60775598 None:intergenic 55.0%
ACCGGATCAAGCTCAAGCTC+AGG + chr2_4:60775587-60775606 Msa0339570:CDS 55.0%
GCCTGAGCTTGAGCTTGATC+CGG - chr2_4:60775591-60775610 None:intergenic 55.0%
ACGGAGGAGTTGTGGATCAG+TGG + chr2_4:60776072-60776091 Msa0339570:CDS 55.0%
CTACGACACCCTCCACCAAC+AGG - chr2_4:60775819-60775838 None:intergenic 60.0%
!! AGTACTGGTGGAGGAGACGG+AGG + chr2_4:60776056-60776075 Msa0339570:CDS 60.0%
TGGAGGAGACGGAGGAGTTG+TGG + chr2_4:60776064-60776083 Msa0339570:CDS 60.0%
CTACGACACCCTCCACCAAC+AGG - chr2_4:60775819-60775838 None:intergenic 60.0%
!! AGTACTGGTGGAGGAGACGG+AGG + chr2_4:60776056-60776075 Msa0339570:CDS 60.0%
TGGAGGAGACGGAGGAGTTG+TGG + chr2_4:60776064-60776083 Msa0339570:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 60775077 60776911 60775077 ID=Msa0339570;Name=Msa0339570
chr2_4 mRNA 60775077 60776911 60775077 ID=Msa0339570-mRNA-1;Parent=Msa0339570;Name=Msa0339570-mRNA-1;_AED=0.06;_eAED=0.06;_QI=180|1|1|1|0.5|0.33|3|359|303
chr2_4 exon 60775077 60775307 60775077 ID=Msa0339570-mRNA-1:exon:18915;Parent=Msa0339570-mRNA-1
chr2_4 exon 60775504 60776391 60775504 ID=Msa0339570-mRNA-1:exon:18916;Parent=Msa0339570-mRNA-1
chr2_4 exon 60776580 60776911 60776580 ID=Msa0339570-mRNA-1:exon:18917;Parent=Msa0339570-mRNA-1
chr2_4 five_prime_UTR 60775077 60775256 60775077 ID=Msa0339570-mRNA-1:five_prime_utr;Parent=Msa0339570-mRNA-1
chr2_4 CDS 60775257 60775307 60775257 ID=Msa0339570-mRNA-1:cds;Parent=Msa0339570-mRNA-1
chr2_4 CDS 60775504 60776364 60775504 ID=Msa0339570-mRNA-1:cds;Parent=Msa0339570-mRNA-1
chr2_4 three_prime_UTR 60776365 60776391 60776365 ID=Msa0339570-mRNA-1:three_prime_utr;Parent=Msa0339570-mRNA-1
chr2_4 three_prime_UTR 60776580 60776911 60776580 ID=Msa0339570-mRNA-1:three_prime_utr;Parent=Msa0339570-mRNA-1
Gene Sequence

>Msa0339570

ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAACCAAATCAACATCAGTTGCTTCCACCACTATCCTCATCACAGCCACATGGTGCAGGCTCAATTATCAGGCCCGGTTCGATACCGGATCAAGCTCAAGCTCAGGCAGCTCATGAAGTTCAAACTGGTCATCAGGTTCAAACTCACCAAGCTAAGTTACCACCACCTTCAGAGACAGCTTTGAAGTGTCCTCGTTGTGAATCAACCAACACAAAATTTTGTTACTACAACAACTATAACCTGTCTCAACCAAGACACTTTTGCAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCATTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAGAGTAACACCTCTACTCCCTCAAAATCTCCAATATCAAATAGTAATGAGAAAGATTATTCAACAAGTGCAATCCATTCAACTTCAACTCCTCTTGGTGAATTCTTACACCCAACTAATAGACCTAATTACATGACATCTCTTCAGAATCTGAACCGGTTCGGTGTTGGAAACATGTTTCAAATTGGTGATTATAGTTCAAGTACTGGTGGAGGAGACGGAGGAGTTGTGGATCAGTGGAGATTTCAGCAGTTTCCTTTCATGAATAATGGTTTTGATTCAAGTACTTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTGTTGAACCAACAACTACTTCTAGGGTTACTACTTTGATGCCTGCATCGGTTAAATCGGAACACAACGGAGGAGGTTTTAATCTGCTTAGATCTCCAATGAATATGTCAGAGAATAACAACCATTACAATAATTCATCATGGACTGATTTTCATGGTCTTGCATCTTCTTCGGCTAGTCGTCTGTTATAA
Protein sequence

>Msa0339570

MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSSQPHGAGSIIRPGSIPDQAQAQAAHEVQTGHQVQTHQAKLPPPSETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSNTSTPSKSPISNSNEKDYSTSAIHSTSTPLGEFLHPTNRPNYMTSLQNLNRFGVGNMFQIGDYSSSTGGGDGGVVDQWRFQQFPFMNNGFDSSTSNVSFPFQSEIVEPTTTSRVTTLMPASVKSEHNGGGFNLLRSPMNMSENNNHYNNSSWTDFHGLASSSASRLL*