AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0222970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222970 MtrunA17_Chr2g0328121 96.484 512 18 0 1 512 1 512 0.0 1024
Msa0222970 MtrunA17_Chr1g0171501 28.728 456 315 4 56 511 152 597 2.54e-53 190
Msa0222970 MtrunA17_Chr7g0256181 24.672 458 331 7 56 511 169 614 7.06e-45 167
Msa0222970 MtrunA17_Chr8g0368151 24.619 459 333 8 58 509 38 490 7.01e-33 131
Msa0222970 MtrunA17_Chr1g0185601 23.810 483 346 9 39 510 31 502 2.28e-31 127
Msa0222970 MtrunA17_Chr8g0359961 21.854 453 340 8 34 478 20 466 1.17e-25 110
Msa0222970 MtrunA17_Chr2g0282091 21.616 458 345 6 58 509 43 492 1.95e-25 109
Msa0222970 MtrunA17_Chr4g0039041 24.100 361 228 6 147 504 293 610 5.67e-23 103
Msa0222970 MtrunA17_Chr2g0303221 24.090 357 265 6 59 411 47 401 6.25e-22 99.0
Msa0222970 MtrunA17_Chr1g0194521 22.300 426 317 8 35 452 76 495 1.71e-21 97.8
Msa0222970 MtrunA17_Chr1g0155351 23.103 290 219 4 54 340 66 354 4.20e-21 95.5
Msa0222970 MtrunA17_Chr3g0136851 23.529 391 265 6 139 497 161 549 1.88e-20 95.5
Msa0222970 MtrunA17_Chr3g0136851 20.847 307 233 3 201 504 818 1117 8.40e-14 74.3
Msa0222970 MtrunA17_Chr3g0136851 18.971 311 237 6 107 408 371 675 5.23e-11 65.5
Msa0222970 MtrunA17_Chr1g0196741 25.424 354 247 8 147 493 288 631 6.60e-20 93.6
Msa0222970 MtrunA17_Chr3g0143411 24.047 341 234 8 174 504 138 463 1.20e-19 92.0
Msa0222970 MtrunA17_Chr6g0482601 21.228 391 271 8 148 504 49 436 1.24e-19 91.7
Msa0222970 MtrunA17_Chr6g0482821 21.558 385 264 9 154 504 147 527 1.49e-19 92.0
Msa0222970 MtrunA17_Chr4g0021331 21.639 476 343 11 26 487 10 469 2.15e-19 91.3
Msa0222970 MtrunA17_Chr6g0481621 20.635 441 301 11 105 504 114 546 2.67e-19 91.3
Msa0222970 MtrunA17_Chr6g0482611 22.409 357 260 8 154 504 149 494 3.82e-19 90.5
Msa0222970 MtrunA17_Chr6g0482561 22.188 329 219 7 210 504 38 363 1.66e-18 87.4
Msa0222970 MtrunA17_Chr6g0481971 21.039 385 266 9 154 504 137 517 2.22e-18 88.2
Msa0222970 MtrunA17_Chr4g0033981 23.138 376 271 7 143 512 251 614 2.61e-18 88.2
Msa0222970 MtrunA17_Chr3g0132571 20.175 456 356 5 54 505 48 499 7.71e-18 86.3
Msa0222970 MtrunA17_Chr8g0377751 22.581 341 221 9 108 408 660 997 1.43e-17 86.3
Msa0222970 MtrunA17_Chr6g0478261 20.044 459 292 13 82 504 103 522 2.15e-17 85.1
Msa0222970 MtrunA17_Chr6g0478001 20.297 404 275 8 143 507 139 534 3.65e-17 84.3
Msa0222970 MtrunA17_Chr2g0324251 22.877 424 290 9 54 449 44 458 3.85e-17 84.0
Msa0222970 MtrunA17_Chr1g0166071 23.399 406 247 7 143 509 271 651 4.21e-17 84.7
Msa0222970 MtrunA17_Chr2g0297991 22.042 431 302 10 92 504 180 594 2.53e-16 82.4
Msa0222970 MtrunA17_Chr2g0297991 21.376 407 261 11 143 504 412 804 1.86e-11 67.0
Msa0222970 MtrunA17_Chr8g0390501 23.543 429 289 10 102 511 69 477 2.82e-16 81.6
Msa0222970 MtrunA17_Chr6g0477341 20.320 438 306 13 105 504 151 583 4.41e-16 81.3
Msa0222970 MtrunA17_Chr7g0257371 24.566 346 228 10 149 479 294 621 4.65e-16 81.6
Msa0222970 MtrunA17_Chr7g0257371 21.780 427 296 12 97 504 136 543 1.13e-11 67.4
Msa0222970 MtrunA17_Chr3g0093791 24.116 311 189 7 198 504 359 626 6.63e-16 80.9
Msa0222970 MtrunA17_Chr3g0093791 20.181 332 261 3 77 405 306 636 5.29e-12 68.6
Msa0222970 MtrunA17_Chr5g0407151 23.607 305 224 3 152 455 287 583 1.74e-15 79.3
Msa0222970 MtrunA17_Chr5g0407151 21.942 278 192 6 147 411 316 581 1.96e-12 69.7
Msa0222970 MtrunA17_Chr1g0168811 24.924 329 200 9 180 504 253 538 3.45e-15 78.6
Msa0222970 MtrunA17_Chr1g0168811 25.714 280 188 7 234 504 200 468 2.35e-12 69.3
Msa0222970 MtrunA17_Chr8g0359551 25.157 318 213 10 205 512 203 505 3.88e-15 78.2
Msa0222970 MtrunA17_Chr8g0382891 23.003 313 210 6 181 478 119 415 4.30e-15 77.8
Msa0222970 MtrunA17_Chr8g0382891 23.040 421 298 11 15 418 24 435 1.18e-13 73.2
Msa0222970 MtrunA17_Chr4g0059671 20.719 473 351 9 40 502 70 528 5.70e-15 78.2
Msa0222970 MtrunA17_Chr4g0059671 22.781 338 221 7 114 412 282 618 5.22e-13 71.6
Msa0222970 MtrunA17_Chr6g0481991 20.930 387 264 11 154 504 174 554 5.90e-15 77.4
Msa0222970 MtrunA17_Chr1g0159521 20.361 388 271 9 154 507 146 529 7.55e-15 77.0
Msa0222970 MtrunA17_Chr8g0391651 22.283 368 270 7 143 504 311 668 8.68e-15 77.4
Msa0222970 MtrunA17_Chr7g0265721 25.205 365 254 9 147 504 360 712 1.07e-14 77.0
Msa0222970 MtrunA17_Chr8g0392911 22.717 427 310 11 82 500 167 581 1.25e-14 76.6
Msa0222970 MtrunA17_Chr3g0102961 19.908 437 275 11 82 483 111 507 1.46e-14 76.3
Msa0222970 MtrunA17_Chr8g0335951 24.336 226 161 3 240 461 191 410 3.21e-14 74.7
Msa0222970 MtrunA17_Chr1g0148741 26.540 211 139 5 296 504 239 435 4.89e-14 74.7
Msa0222970 MtrunA17_Chr7g0220481 19.274 358 268 4 114 460 245 592 5.15e-14 75.1
Msa0222970 MtrunA17_Chr6g0481981 19.689 386 248 11 181 507 49 431 5.34e-14 74.3
Msa0222970 MtrunA17_Chr1g0162741 22.674 344 244 8 167 500 230 561 6.55e-14 74.3
Msa0222970 MtrunA17_Chr1g0182521 21.988 332 238 8 93 411 252 575 6.95e-14 74.3
Msa0222970 MtrunA17_Chr5g0446031 22.741 343 242 11 164 497 223 551 7.93e-14 74.3
Msa0222970 MtrunA17_Chr5g0446031 22.222 324 235 8 163 479 148 461 6.77e-11 65.1
Msa0222970 MtrunA17_Chr6g0481601 20.207 386 280 10 105 478 114 483 1.10e-13 73.2
Msa0222970 MtrunA17_Chr3g0099661 21.893 338 250 7 147 480 315 642 1.14e-13 73.9
Msa0222970 MtrunA17_Chr3g0099661 21.228 391 240 7 150 507 211 566 4.36e-13 72.0
Msa0222970 MtrunA17_Chr3g0099661 18.622 392 251 7 145 504 383 738 7.69e-12 68.2
Msa0222970 MtrunA17_Chr5g0434021 20.772 337 246 6 147 477 296 617 1.17e-13 73.9
Msa0222970 MtrunA17_Chr6g0478691 23.907 343 235 9 145 477 209 535 1.23e-13 73.6
Msa0222970 MtrunA17_Chr6g0478691 22.866 328 222 7 181 504 54 354 5.04e-13 71.6
Msa0222970 MtrunA17_Chr5g0412071 23.037 382 220 11 158 504 344 686 1.54e-13 73.6
Msa0222970 MtrunA17_Chr1g0190191 23.005 426 299 13 92 504 105 514 1.56e-13 73.2
Msa0222970 MtrunA17_Chr1g0210801 28.947 190 120 4 320 504 174 353 1.85e-13 72.8
Msa0222970 MtrunA17_Chr1g0210801 24.033 362 260 8 52 406 187 540 2.02e-13 72.8
Msa0222970 MtrunA17_Chr1g0210801 20.181 441 330 7 77 507 103 531 4.00e-12 68.6
Msa0222970 MtrunA17_Chr6g0478551 20.520 346 251 7 143 479 196 526 2.14e-13 72.4
Msa0222970 MtrunA17_Chr5g0419551 20.784 255 200 2 143 395 353 607 2.42e-13 72.8
Msa0222970 MtrunA17_Chr5g0419551 23.698 384 265 11 133 502 235 604 1.74e-11 66.6
Msa0222970 MtrunA17_Chr6g0473441 19.347 429 307 9 109 501 90 515 2.44e-13 72.4
Msa0222970 MtrunA17_Chr3g0116201 23.585 212 153 3 201 407 169 376 3.08e-13 72.0
Msa0222970 MtrunA17_Chr4g0047591 22.321 336 227 7 199 502 342 675 3.24e-13 72.4
Msa0222970 MtrunA17_Chr7g0257471 22.670 397 285 9 120 503 316 703 3.30e-13 72.4
Msa0222970 MtrunA17_Chr7g0257471 25.989 177 122 3 330 504 220 389 1.06e-11 67.8
Msa0222970 MtrunA17_Chr1g0168761 21.547 362 257 11 154 504 130 475 3.56e-13 72.0
Msa0222970 MtrunA17_Chr6g0473351 20.561 428 300 10 109 501 90 512 3.65e-13 72.0
Msa0222970 MtrunA17_Chr5g0417961 21.608 398 264 5 143 509 270 650 3.82e-13 72.0
Msa0222970 MtrunA17_Chr6g0482571 20.611 393 256 11 147 504 10 381 4.79e-13 70.9
Msa0222970 MtrunA17_Chr6g0471201 28.571 224 151 4 193 411 290 509 4.89e-13 71.2
Msa0222970 MtrunA17_Chr6g0471871 22.252 373 264 10 143 504 172 529 5.37e-13 71.2
Msa0222970 MtrunA17_Chr3g0089851 23.792 269 190 7 212 475 201 459 6.43e-13 70.9
Msa0222970 MtrunA17_Chr2g0282801 23.964 338 230 9 178 503 49 371 6.49e-13 70.9
Msa0222970 MtrunA17_Chr7g0256621 27.979 193 122 5 323 509 225 406 6.68e-13 70.9
Msa0222970 MtrunA17_Chr7g0231941 27.397 219 143 7 294 504 165 375 6.97e-13 71.2
Msa0222970 MtrunA17_Chr7g0231941 19.677 371 280 7 146 504 157 521 4.63e-11 65.5
Msa0222970 MtrunA17_Chr6g0473331 19.740 385 271 9 154 504 176 556 7.24e-13 70.9
Msa0222970 MtrunA17_Chr4g0019851 20.137 293 188 4 216 507 200 447 1.13e-12 70.1
Msa0222970 MtrunA17_Chr7g0218641 20.103 388 275 6 147 501 132 517 1.55e-12 69.7
Msa0222970 MtrunA17_Chr7g0220501 20.604 364 260 8 109 460 281 627 1.64e-12 70.1
Msa0222970 MtrunA17_Chr6g0477511 22.500 280 198 8 143 412 213 483 1.66e-12 69.7
Msa0222970 MtrunA17_Chr6g0481751 23.226 310 206 9 212 507 155 446 1.79e-12 69.3
Msa0222970 MtrunA17_Chr8g0390041 21.329 286 222 3 108 390 176 461 1.93e-12 69.7
Msa0222970 MtrunA17_Chr4g0048611 21.560 436 277 13 117 504 254 672 2.88e-12 69.3
Msa0222970 MtrunA17_Chr6g0482651 22.102 371 234 7 145 507 195 518 3.28e-12 68.9
Msa0222970 MtrunA17_Chr4g0037841 24.397 373 228 10 143 506 234 561 3.54e-12 68.9
Msa0222970 MtrunA17_Chr2g0285331 20.640 344 247 6 85 413 171 503 3.77e-12 68.9
Msa0222970 MtrunA17_Chr5g0396041 22.321 336 235 8 181 504 266 587 4.24e-12 69.3
Msa0222970 MtrunA17_Chr3g0143851 19.712 416 311 9 92 496 191 594 4.33e-12 68.6
Msa0222970 MtrunA17_Chr3g0143851 17.703 418 289 8 102 510 307 678 7.33e-11 64.7
Msa0222970 MtrunA17_Chr1g0170071 19.549 399 270 11 145 502 374 762 4.61e-12 68.9
Msa0222970 MtrunA17_Chr1g0170071 24.113 282 187 7 145 412 549 817 1.75e-11 67.0
Msa0222970 MtrunA17_Chr6g0473491 18.648 429 310 9 109 501 90 515 5.54e-12 68.2
Msa0222970 MtrunA17_Chr8g0347201 19.802 404 265 7 57 454 376 726 5.95e-12 68.6
Msa0222970 MtrunA17_Chr7g0236501 21.514 251 195 2 147 395 224 474 6.34e-12 67.8
Msa0222970 MtrunA17_Chr1g0147171 21.739 345 247 8 143 478 143 473 7.80e-12 67.8
Msa0222970 MtrunA17_Chr3g0121341 21.683 309 224 9 201 504 288 583 8.10e-12 67.8
Msa0222970 MtrunA17_Chr6g0482541 20.323 310 231 7 201 504 29 328 8.54e-12 67.0
Msa0222970 MtrunA17_Chr3g0091741 24.775 222 146 5 201 408 145 359 8.57e-12 67.4
Msa0222970 MtrunA17_Chr6g0483431 23.005 213 153 3 201 407 158 365 8.66e-12 67.0
Msa0222970 MtrunA17_Chr4g0060341 24.665 373 227 10 143 506 234 561 9.10e-12 67.4
Msa0222970 MtrunA17_Chr2g0304071 22.193 374 274 7 136 504 187 548 1.03e-11 67.8
Msa0222970 MtrunA17_Chr6g0477361 21.698 318 191 7 201 504 21 294 1.10e-11 65.9
Msa0222970 MtrunA17_Chr6g0482971 20.690 406 244 13 143 511 157 521 1.10e-11 67.0
Msa0222970 MtrunA17_Chr6g0482971 22.419 339 246 8 81 407 125 458 5.67e-11 65.1
Msa0222970 MtrunA17_Chr7g0260101 22.403 308 211 10 204 501 33 322 1.11e-11 66.2
Msa0222970 MtrunA17_Chr2g0296901 20.726 468 325 12 63 497 107 561 1.12e-11 67.4
Msa0222970 MtrunA17_Chr2g0296901 28.977 176 114 5 332 504 224 391 7.41e-11 64.7
Msa0222970 MtrunA17_Chr8g0369641 22.761 268 198 4 147 409 529 792 1.24e-11 67.4
Msa0222970 MtrunA17_Chr8g0369641 26.837 313 210 10 200 504 266 567 2.11e-11 66.6
Msa0222970 MtrunA17_Chr8g0369641 20.235 341 257 5 143 478 279 609 6.18e-11 65.1
Msa0222970 MtrunA17_Chr5g0394721 23.548 310 211 8 207 504 158 453 1.27e-11 67.0
Msa0222970 MtrunA17_Chr5g0394721 23.431 239 171 4 163 395 222 454 2.63e-11 65.9
Msa0222970 MtrunA17_Chr6g0472611 18.381 457 320 10 81 501 82 521 1.35e-11 67.0
Msa0222970 MtrunA17_Chr6g0458411 20.779 308 239 4 109 412 197 503 1.71e-11 66.6
Msa0222970 MtrunA17_Chr8g0368891 21.882 457 303 12 65 504 143 562 1.81e-11 66.6
Msa0222970 MtrunA17_Chr1g0200211 20.438 274 167 4 210 478 207 434 1.84e-11 66.6
Msa0222970 MtrunA17_Chr6g0473181 29.121 182 120 2 325 504 24 198 1.84e-11 64.7
Msa0222970 MtrunA17_Chr1g0162281 22.396 384 244 9 143 477 263 641 1.88e-11 66.6
Msa0222970 MtrunA17_Chr2g0284331 24.312 218 152 4 201 413 204 413 1.91e-11 66.6
Msa0222970 MtrunA17_Chr2g0331911 20.976 410 292 9 82 477 238 629 1.94e-11 66.6
Msa0222970 MtrunA17_Chr7g0241871 25.368 272 177 7 213 474 128 383 2.32e-11 66.2
Msa0222970 MtrunA17_Chr7g0241871 24.064 187 133 2 320 504 131 310 5.07e-11 65.5
Msa0222970 MtrunA17_Chr1g0171281 21.608 398 268 13 145 504 128 519 2.55e-11 65.9
Msa0222970 MtrunA17_Chr6g0482751 20.645 465 281 15 84 507 109 526 3.97e-11 65.5
Msa0222970 MtrunA17_Chr6g0482751 22.319 345 231 9 172 504 64 383 8.00e-11 64.3
Msa0222970 MtrunA17_Chr6g0473251 19.580 429 303 11 109 501 90 512 4.71e-11 65.1
Msa0222970 MtrunA17_Chr3g0125131 21.875 256 190 4 251 504 133 380 5.48e-11 64.7
Msa0222970 MtrunA17_Chr6g0482791 20.261 459 306 15 61 473 40 484 6.75e-11 64.7
Msa0222970 MtrunA17_Chr3g0133151 24.638 207 147 6 212 412 197 400 7.21e-11 64.7
Msa0222970 MtrunA17_Chr4g0038401 24.779 226 164 5 167 389 661 883 7.65e-11 65.1
Msa0222970 MtrunA17_Chr3g0118171 22.074 299 211 8 214 502 170 456 8.38e-11 64.3
Msa0222970 MtrunA17_Chr4g0030691 26.984 189 125 3 320 504 184 363 8.58e-11 64.3
Msa0222970 MtrunA17_Chr2g0307781 24.051 316 219 7 177 485 83 384 9.93e-11 64.3
Msa0222970 MtrunA17_Chr5g0395201 23.445 209 145 3 212 412 614 815 9.99e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0222970 AT1G07590.1 60.976 533 184 3 3 511 1 533 0.0 679
Msa0222970 AT1G80270.1 27.689 437 306 4 43 479 129 555 4.37e-53 189
Msa0222970 AT1G80270.3 27.689 437 306 4 43 479 129 555 4.37e-53 189
Msa0222970 AT1G80270.2 27.689 437 306 4 43 479 129 555 4.37e-53 189
Msa0222970 AT1G80270.5 27.689 437 306 4 43 479 129 555 4.37e-53 189
Msa0222970 AT1G80270.4 27.689 437 306 4 43 479 129 555 4.37e-53 189
Msa0222970 AT1G15480.1 25.877 456 329 4 56 511 139 585 7.90e-47 172
Msa0222970 AT4G02820.1 23.478 460 334 6 58 511 76 523 2.61e-33 133
Msa0222970 AT1G60770.1 25.513 439 315 7 77 509 57 489 8.80e-33 131
Msa0222970 AT1G02150.1 24.641 418 302 6 44 454 67 478 3.73e-31 127
Msa0222970 AT3G15590.1 24.123 456 335 6 57 511 155 600 6.71e-31 127
Msa0222970 AT3G15590.2 24.123 456 335 6 57 511 155 600 6.71e-31 127
Msa0222970 AT2G20710.1 25.668 374 265 5 44 409 38 406 5.44e-30 123
Msa0222970 AT4G01990.1 23.904 456 329 10 56 504 53 497 3.15e-27 115
Msa0222970 AT1G02370.1 23.418 474 342 10 43 505 70 533 1.89e-26 113
Msa0222970 AT1G09900.1 22.482 427 307 9 87 504 149 560 1.78e-24 107
Msa0222970 AT2G20710.2 25.962 312 219 4 105 409 5 311 8.16e-23 100
Msa0222970 AT5G09450.1 24.224 322 230 9 38 348 49 367 1.18e-21 97.8
Msa0222970 AT5G27460.1 21.729 428 326 6 37 458 32 456 9.27e-21 95.5
Msa0222970 AT4G21705.1 20.697 459 351 7 54 504 33 486 1.44e-20 95.1
Msa0222970 AT1G62680.1 22.247 454 325 13 64 504 38 476 2.27e-19 91.7
Msa0222970 AT1G62680.2 22.247 454 325 13 64 504 38 476 2.27e-19 91.7
Msa0222970 AT5G02860.1 21.918 365 269 7 150 507 178 533 4.41e-19 91.3
Msa0222970 AT5G02860.1 21.488 363 270 8 58 411 191 547 4.99e-17 85.1
Msa0222970 AT5G02860.4 21.918 365 269 7 150 507 178 533 4.41e-19 91.3
Msa0222970 AT5G02860.4 21.488 363 270 8 58 411 191 547 4.99e-17 85.1
Msa0222970 AT5G02860.2 21.918 365 269 7 150 507 178 533 4.41e-19 91.3
Msa0222970 AT5G02860.2 21.488 363 270 8 58 411 191 547 4.99e-17 85.1
Msa0222970 AT5G02860.5 21.918 365 269 7 150 507 178 533 4.41e-19 91.3
Msa0222970 AT5G02860.5 21.488 363 270 8 58 411 191 547 4.99e-17 85.1
Msa0222970 AT5G02860.3 21.918 365 269 7 150 507 178 533 4.41e-19 91.3
Msa0222970 AT5G02860.3 21.488 363 270 8 58 411 191 547 4.99e-17 85.1
Msa0222970 AT1G28020.1 24.642 349 243 9 51 387 44 384 5.96e-18 87.0
Msa0222970 AT4G39620.2 22.515 342 257 4 73 406 95 436 1.10e-17 86.3
Msa0222970 AT4G11690.1 23.567 314 235 4 102 411 189 501 1.32e-17 86.3
Msa0222970 AT4G39620.1 22.360 322 242 4 93 406 115 436 1.52e-17 86.3
Msa0222970 AT1G05670.1 23.782 349 240 9 167 504 234 567 4.23e-17 85.1
Msa0222970 AT1G05670.2 23.782 349 240 9 167 504 234 567 4.23e-17 85.1
Msa0222970 AT1G05670.3 23.782 349 240 9 167 504 234 567 4.23e-17 85.1
Msa0222970 AT4G31850.1 22.444 401 259 8 147 504 576 967 4.71e-17 85.1
Msa0222970 AT4G31850.1 23.423 333 225 7 192 504 786 1108 3.61e-13 72.8
Msa0222970 AT4G11690.2 24.354 271 202 3 143 411 205 474 1.19e-16 83.2
Msa0222970 AT2G16880.1 26.415 371 239 12 147 502 313 664 2.25e-16 82.8
Msa0222970 AT2G16880.1 22.881 354 253 6 133 477 226 568 1.39e-13 73.9
Msa0222970 AT3G60050.2 27.941 272 183 7 147 411 187 452 2.66e-16 82.0
Msa0222970 AT3G60050.1 27.941 272 183 7 147 411 187 452 2.66e-16 82.0
Msa0222970 AT1G62670.2 23.288 365 266 6 145 504 257 612 5.13e-16 81.6
Msa0222970 AT1G62670.2 23.913 322 225 9 163 477 170 478 9.42e-14 74.3
Msa0222970 AT1G62670.2 22.161 361 259 10 152 504 91 437 6.28e-12 68.6
Msa0222970 AT1G62670.1 23.288 365 266 6 145 504 257 612 5.13e-16 81.6
Msa0222970 AT1G62670.1 23.913 322 225 9 163 477 170 478 9.42e-14 74.3
Msa0222970 AT1G62670.1 22.161 361 259 10 152 504 91 437 6.28e-12 68.6
Msa0222970 AT4G28010.1 25.076 327 223 8 102 415 273 590 5.17e-16 81.6
Msa0222970 AT2G18940.1 22.616 367 262 9 147 504 319 672 6.61e-16 81.3
Msa0222970 AT2G18940.1 19.048 441 333 9 77 504 138 567 1.24e-14 77.4
Msa0222970 AT2G18940.1 20.580 379 250 9 143 481 385 752 4.23e-12 69.3
Msa0222970 AT5G42310.1 21.343 417 275 9 102 510 330 701 6.89e-16 81.3
Msa0222970 AT5G42310.1 19.212 406 306 7 102 496 223 617 1.98e-11 67.0
Msa0222970 AT1G55630.1 29.740 269 174 8 147 407 190 451 7.35e-16 80.5
Msa0222970 AT3G48810.1 19.920 497 305 11 79 504 60 534 7.74e-16 80.9
Msa0222970 AT5G39980.1 21.351 370 281 5 42 407 91 454 1.32e-15 80.1
Msa0222970 AT3G04760.2 22.222 423 306 9 94 504 108 519 2.42e-15 79.3
Msa0222970 AT5G12100.1 23.161 367 264 6 145 504 285 640 2.58e-15 79.7
Msa0222970 AT5G64320.1 21.782 404 303 6 105 504 316 710 2.84e-15 79.3
Msa0222970 AT5G61990.1 25.000 276 196 7 143 412 451 721 3.05e-15 79.3
Msa0222970 AT5G61990.1 21.563 371 277 4 109 474 380 741 7.38e-15 78.2
Msa0222970 AT1G31840.1 21.446 401 303 6 102 497 417 810 3.86e-15 79.0
Msa0222970 AT5G16640.1 22.442 303 220 5 117 407 151 450 3.97e-15 78.2
Msa0222970 AT5G16640.1 23.016 252 189 4 163 411 170 419 3.80e-11 65.9
Msa0222970 AT3G23020.1 22.581 372 232 8 147 477 301 657 4.56e-15 79.0
Msa0222970 AT3G04760.1 22.353 425 300 11 93 504 142 549 4.56e-15 78.6
Msa0222970 AT3G18110.1 22.482 427 268 10 92 504 172 549 5.99e-15 78.6
Msa0222970 AT2G35130.1 24.542 273 199 3 143 411 298 567 8.45e-15 77.4
Msa0222970 AT2G35130.1 19.703 472 286 12 82 504 123 550 1.91e-13 73.2
Msa0222970 AT2G35130.3 24.542 273 199 3 143 411 295 564 8.78e-15 77.4
Msa0222970 AT2G35130.3 19.829 469 286 12 82 504 123 547 8.87e-14 74.3
Msa0222970 AT3G16710.1 23.565 331 211 9 83 409 57 349 9.46e-15 77.0
Msa0222970 AT3G16710.2 23.867 331 210 10 83 409 57 349 9.58e-15 77.0
Msa0222970 AT2G35130.2 23.704 270 205 1 143 411 320 589 9.89e-15 77.4
Msa0222970 AT2G35130.2 19.703 472 286 12 82 504 145 572 2.23e-13 73.2
Msa0222970 AT1G63130.1 22.991 448 288 13 66 504 38 437 1.24e-14 77.0
Msa0222970 AT1G63130.1 20.767 443 300 9 104 504 179 612 9.17e-14 74.3
Msa0222970 AT1G63130.2 22.991 448 288 13 66 504 38 437 1.24e-14 77.0
Msa0222970 AT1G63130.2 20.767 443 300 9 104 504 179 612 9.17e-14 74.3
Msa0222970 AT5G41170.2 23.416 363 237 10 52 409 12 338 1.84e-14 76.3
Msa0222970 AT1G63080.2 23.197 319 211 7 201 504 297 596 2.22e-14 76.3
Msa0222970 AT1G63080.1 23.197 319 211 7 201 504 297 596 2.22e-14 76.3
Msa0222970 AT1G63080.3 23.197 319 211 7 201 504 297 596 2.22e-14 76.3
Msa0222970 AT1G12700.1 20.661 363 274 7 147 504 231 584 2.51e-14 76.3
Msa0222970 AT5G41170.1 23.416 363 237 10 52 409 12 338 2.54e-14 75.9
Msa0222970 AT1G12620.1 22.145 429 312 12 84 504 119 533 2.54e-14 76.3
Msa0222970 AT1G12700.3 20.661 363 274 7 147 504 247 600 2.55e-14 76.3
Msa0222970 AT1G12700.2 20.661 363 274 7 147 504 247 600 2.55e-14 76.3
Msa0222970 AT5G39710.1 22.244 508 362 18 21 512 81 571 2.99e-14 76.3
Msa0222970 AT5G25630.1 21.114 431 298 11 102 511 71 480 3.47e-14 75.5
Msa0222970 AT5G25630.3 21.114 431 298 11 102 511 20 429 3.55e-14 75.5
Msa0222970 AT5G59900.1 22.069 290 220 3 143 427 611 899 3.59e-14 75.9
Msa0222970 AT5G18475.1 25.837 209 146 7 210 412 192 397 5.02e-14 74.7
Msa0222970 AT3G16010.1 21.535 404 291 9 82 474 240 628 5.22e-14 75.1
Msa0222970 AT2G32630.1 23.596 356 246 13 160 504 205 545 5.67e-14 75.1
Msa0222970 AT2G32630.1 21.019 314 238 5 167 478 282 587 1.81e-11 67.0
Msa0222970 AT1G63150.2 21.946 442 314 11 77 504 187 611 6.07e-14 75.1
Msa0222970 AT1G63150.1 21.946 442 314 11 77 504 187 611 6.07e-14 75.1
Msa0222970 AT5G21222.1 20.991 343 239 8 158 478 317 649 6.56e-14 75.1
Msa0222970 AT5G21222.1 21.652 351 225 7 104 409 347 692 9.86e-13 71.2
Msa0222970 AT5G21222.1 22.715 361 259 8 93 444 407 756 4.76e-12 69.3
Msa0222970 AT5G21222.2 20.991 343 239 8 158 478 317 649 6.56e-14 75.1
Msa0222970 AT5G21222.2 21.652 351 225 7 104 409 347 692 9.86e-13 71.2
Msa0222970 AT5G21222.2 22.715 361 259 8 93 444 407 756 4.76e-12 69.3
Msa0222970 AT5G21222.4 20.991 343 239 8 158 478 317 649 6.56e-14 75.1
Msa0222970 AT5G21222.4 21.652 351 225 7 104 409 347 692 9.86e-13 71.2
Msa0222970 AT5G21222.4 22.715 361 259 8 93 444 407 756 4.76e-12 69.3
Msa0222970 AT5G21222.3 20.991 343 239 8 158 478 317 649 6.56e-14 75.1
Msa0222970 AT5G21222.3 21.652 351 225 7 104 409 347 692 9.86e-13 71.2
Msa0222970 AT5G21222.3 22.715 361 259 8 93 444 407 756 4.76e-12 69.3
Msa0222970 AT1G62910.1 21.910 356 246 10 163 504 172 509 8.72e-14 74.3
Msa0222970 AT1G62910.1 21.445 443 318 11 77 504 187 614 1.08e-12 70.9
Msa0222970 AT1G74850.1 20.050 399 273 7 143 502 140 531 1.05e-13 74.3
Msa0222970 AT1G74850.1 19.634 382 262 4 147 490 250 624 4.71e-12 69.3
Msa0222970 AT1G02060.1 22.887 284 197 8 234 504 85 359 1.06e-13 74.3
Msa0222970 AT3G22470.1 22.754 334 246 8 81 407 216 544 1.25e-13 73.9
Msa0222970 AT3G22470.1 20.506 356 268 7 154 504 186 531 8.34e-12 68.2
Msa0222970 AT1G63330.3 22.419 339 227 10 182 504 13 331 1.25e-13 73.9
Msa0222970 AT1G63330.3 20.597 335 200 7 201 504 172 471 1.71e-11 67.0
Msa0222970 AT1G63330.1 22.419 339 227 10 182 504 13 331 1.25e-13 73.9
Msa0222970 AT1G63330.1 20.597 335 200 7 201 504 172 471 1.71e-11 67.0
Msa0222970 AT1G63330.2 22.419 339 227 10 182 504 13 331 1.25e-13 73.9
Msa0222970 AT1G63330.2 20.597 335 200 7 201 504 172 471 1.71e-11 67.0
Msa0222970 AT1G62930.1 21.149 435 286 10 118 504 186 611 1.40e-13 73.9
Msa0222970 AT1G62930.1 19.512 451 280 10 94 504 64 471 1.44e-11 67.4
Msa0222970 AT2G41720.1 24.427 262 191 4 147 403 216 475 1.84e-13 73.6
Msa0222970 AT1G51965.1 23.035 369 224 10 180 504 134 486 1.93e-13 73.6
Msa0222970 AT1G51965.1 21.753 308 228 4 200 504 294 591 9.10e-13 71.2
Msa0222970 AT2G41720.3 24.427 262 191 4 147 403 216 475 1.95e-13 73.6
Msa0222970 AT3G06920.2 22.304 408 248 10 164 504 202 607 2.25e-13 73.6
Msa0222970 AT3G06920.3 22.304 408 248 10 164 504 202 607 2.25e-13 73.6
Msa0222970 AT1G73710.1 21.053 342 248 6 147 480 308 635 2.34e-13 73.6
Msa0222970 AT1G73710.1 22.500 280 184 8 147 409 378 641 2.01e-11 67.4
Msa0222970 AT3G06920.1 22.304 408 248 10 164 504 188 593 2.95e-13 73.2
Msa0222970 AT2G41720.2 24.427 262 191 4 147 403 84 343 2.99e-13 72.8
Msa0222970 AT2G01740.1 22.323 439 282 14 82 477 28 450 3.39e-13 72.4
Msa0222970 AT1G03560.1 24.561 342 230 12 147 477 155 479 3.69e-13 72.4
Msa0222970 AT5G01110.1 21.247 433 285 10 82 504 312 698 3.74e-13 72.4
Msa0222970 AT1G18900.4 19.355 341 266 4 77 414 330 664 3.98e-13 72.8
Msa0222970 AT1G18900.2 19.355 341 266 4 77 414 330 664 3.98e-13 72.8
Msa0222970 AT1G18900.1 19.355 341 266 4 77 414 330 664 3.98e-13 72.8
Msa0222970 AT4G26800.2 23.355 304 213 7 209 504 118 409 4.11e-13 72.0
Msa0222970 AT1G18900.3 19.355 341 266 4 77 414 330 664 4.18e-13 72.4
Msa0222970 AT4G26800.3 23.355 304 213 7 209 504 43 334 4.52e-13 71.6
Msa0222970 AT5G65560.1 20.673 416 306 7 101 504 275 678 4.75e-13 72.4
Msa0222970 AT5G65560.2 20.673 416 306 7 101 504 275 678 4.75e-13 72.4
Msa0222970 AT5G65560.3 20.673 416 306 7 101 504 275 678 4.75e-13 72.4
Msa0222970 AT4G19440.4 23.899 318 220 8 112 412 510 822 5.06e-13 72.4
Msa0222970 AT4G19440.2 23.899 318 220 8 112 412 510 822 5.06e-13 72.4
Msa0222970 AT4G19440.3 23.899 318 220 8 112 412 510 822 5.06e-13 72.4
Msa0222970 AT4G19440.1 23.899 318 220 8 112 412 510 822 5.06e-13 72.4
Msa0222970 AT5G01110.2 21.247 433 285 10 82 504 340 726 5.24e-13 72.0
Msa0222970 AT1G62590.2 22.093 344 235 10 176 504 81 406 5.31e-13 72.0
Msa0222970 AT1G62590.2 20.597 335 200 7 201 504 247 546 7.88e-13 71.2
Msa0222970 AT1G62590.1 22.093 344 235 10 176 504 81 406 5.31e-13 72.0
Msa0222970 AT1G62590.1 20.597 335 200 7 201 504 247 546 7.88e-13 71.2
Msa0222970 AT1G64583.1 21.554 399 282 9 114 504 87 462 6.59e-13 71.2
Msa0222970 AT1G64583.2 21.554 399 282 9 114 504 62 437 8.38e-13 70.9
Msa0222970 AT1G09820.1 21.266 395 259 8 123 477 135 517 9.55e-13 71.2
Msa0222970 AT5G24830.1 24.521 261 192 2 150 407 271 529 1.09e-12 70.9
Msa0222970 AT3G53700.1 23.151 311 195 7 141 411 292 598 1.15e-12 71.2
Msa0222970 AT1G12300.1 20.794 428 319 8 84 504 135 549 1.21e-12 70.9
Msa0222970 AT3G22470.2 22.253 364 230 8 164 504 58 391 1.33e-12 70.5
Msa0222970 AT5G50280.1 22.973 296 183 4 146 400 346 637 1.34e-12 70.9
Msa0222970 AT1G63400.1 20.619 485 304 13 94 504 69 546 1.63e-12 70.5
Msa0222970 AT1G63400.1 20.976 410 296 7 104 500 183 577 1.72e-12 70.1
Msa0222970 AT2G39230.1 22.378 286 185 9 236 504 471 736 1.79e-12 70.5
Msa0222970 AT2G02150.1 23.588 301 212 6 211 504 189 478 3.05e-12 69.7
Msa0222970 AT2G02150.2 23.588 301 212 6 211 504 189 478 3.05e-12 69.7
Msa0222970 AT1G63070.1 23.397 312 219 8 176 479 71 370 3.13e-12 69.3
Msa0222970 AT1G63070.1 20.581 413 303 8 104 504 173 572 4.54e-11 65.9
Msa0222970 AT2G06000.1 23.179 302 201 9 216 504 105 388 3.84e-12 68.9
Msa0222970 AT2G06000.2 23.179 302 201 9 216 504 105 388 3.84e-12 68.9
Msa0222970 AT1G74900.1 21.769 294 219 4 214 504 91 376 4.92e-12 68.6
Msa0222970 AT5G16420.1 21.376 407 290 9 103 504 95 476 6.21e-12 68.6
Msa0222970 AT5G16420.3 21.376 407 290 9 103 504 95 476 6.21e-12 68.6
Msa0222970 AT5G16420.4 21.376 407 290 9 103 504 95 476 6.21e-12 68.6
Msa0222970 AT5G16420.2 21.376 407 290 9 103 504 95 476 6.21e-12 68.6
Msa0222970 AT3G09060.2 23.913 230 168 4 182 407 152 378 7.25e-12 68.6
Msa0222970 AT3G09060.2 20.717 251 194 4 163 409 97 346 1.43e-11 67.4
Msa0222970 AT3G09060.1 23.913 230 168 4 182 407 152 378 7.25e-12 68.6
Msa0222970 AT3G09060.1 20.717 251 194 4 163 409 97 346 1.43e-11 67.4
Msa0222970 AT1G13800.1 18.769 325 241 3 107 409 529 852 8.38e-12 68.6
Msa0222970 AT1G13800.2 18.769 325 241 3 107 409 529 852 8.38e-12 68.6
Msa0222970 AT1G80550.1 24.500 200 135 3 309 504 180 367 1.20e-11 67.4
Msa0222970 AT2G31400.2 22.050 322 223 7 112 407 375 694 1.63e-11 67.4
Msa0222970 AT2G31400.2 20.760 342 219 7 143 478 302 597 5.16e-11 65.9
Msa0222970 AT4G26800.1 27.273 187 127 2 320 504 85 264 1.76e-11 66.2
Msa0222970 AT3G54980.1 22.443 352 259 8 158 504 388 730 1.90e-11 67.4
Msa0222970 AT3G54980.2 22.443 352 259 8 158 504 388 730 1.90e-11 67.4
Msa0222970 AT2G31400.1 22.050 322 223 7 112 407 375 694 1.99e-11 67.4
Msa0222970 AT2G31400.1 21.802 344 213 8 143 478 302 597 5.39e-11 65.9
Msa0222970 AT1G06580.3 21.222 311 214 8 117 407 43 342 2.17e-11 66.2
Msa0222970 AT1G06580.2 21.222 311 214 8 117 407 43 342 2.17e-11 66.2
Msa0222970 AT5G55740.1 20.468 342 227 6 115 456 414 710 2.33e-11 67.0
Msa0222970 AT1G06580.1 21.222 311 214 8 117 407 149 448 2.68e-11 66.2
Msa0222970 AT1G74750.2 22.650 234 178 3 180 411 395 627 3.46e-11 66.6
Msa0222970 AT1G74750.2 18.976 332 263 5 77 404 325 654 6.69e-11 65.5
Msa0222970 AT1G74750.1 22.650 234 178 3 180 411 395 627 3.46e-11 66.6
Msa0222970 AT1G74750.1 18.976 332 263 5 77 404 325 654 6.69e-11 65.5
Msa0222970 AT1G74750.4 22.650 234 178 3 180 411 395 627 3.46e-11 66.6
Msa0222970 AT1G74750.4 18.976 332 263 5 77 404 325 654 6.69e-11 65.5
Msa0222970 AT1G74750.3 22.650 234 178 3 180 411 395 627 3.46e-11 66.6
Msa0222970 AT1G74750.3 18.976 332 263 5 77 404 325 654 6.69e-11 65.5
Msa0222970 AT4G30825.1 20.134 298 229 3 183 478 316 606 4.06e-11 66.2
Msa0222970 AT5G38730.1 24.377 361 246 9 145 494 173 517 4.26e-11 65.9
Msa0222970 AT1G12775.1 22.701 348 251 9 164 504 108 444 4.34e-11 65.9
Msa0222970 AT3G61520.1 23.018 391 272 11 82 456 336 713 5.12e-11 65.9
Msa0222970 AT5G48730.1 23.053 321 223 11 165 475 171 477 6.15e-11 65.1
Msa0222970 AT5G41170.3 22.857 245 155 4 165 409 28 238 7.25e-11 64.7

Find 100 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGTGATGGAATGGGTAATA+AGG 0.226378 2_1:-72400224 Msa0222970:CDS
TGTATATAATACCTTGATTA+AGG 0.231990 2_1:-72399113 Msa0222970:CDS
ATCATCCTTCTCAAAAGATT+TGG 0.245572 2_1:+72399064 None:intergenic
CTTATATTGTATGGGTATCT+TGG 0.271184 2_1:-72399640 Msa0222970:CDS
AGGATTTGGAGTATTATTAA+AGG 0.278975 2_1:-72399598 Msa0222970:CDS
GAAGCTATAGATTCTCCTTT+TGG 0.284878 2_1:+72401248 None:intergenic
TTAAAGACCAAATGCGAAAT+AGG 0.325228 2_1:+72399985 None:intergenic
AACGTATCGACATCTTGTTC+TGG 0.327459 2_1:-72399344 Msa0222970:CDS
AATCTATGACAGGGAATAAT+TGG 0.328265 2_1:-72399681 Msa0222970:CDS
CATGAAGAAAATGAGGGAAT+TGG 0.331480 2_1:-72400013 Msa0222970:CDS
TTCATAAAGCTAAGTATTGT+AGG 0.336671 2_1:-72399144 Msa0222970:CDS
TGAAAATTGCTGAACAGTTT+CGG 0.337323 2_1:-72399000 Msa0222970:CDS
ATCTAGTTCCCTAGGTCTAT+AGG 0.347020 2_1:+72400194 None:intergenic
TTATATTGTATGGGTATCTT+GGG 0.353662 2_1:-72399639 Msa0222970:CDS
GTTCTGGGTTGCTTGAAATC+TGG 0.361131 2_1:-72399328 Msa0222970:CDS
GGAAGGAGCTGGAAAGGATT+TGG 0.361161 2_1:-72399612 Msa0222970:CDS
TTCTCTTACACAAGCTATCT+TGG 0.362452 2_1:+72401282 None:intergenic
GTGATTGCTTGTTTAGATAA+AGG 0.365191 2_1:-72400060 Msa0222970:CDS
GGGTCATCCTATTTCGCATT+TGG 0.367659 2_1:-72399992 Msa0222970:CDS
TCAGAAATGGAATCAGTAAA+AGG 0.371924 2_1:-72399487 Msa0222970:CDS
GGAACTAGATTACTCTTATC+TGG 0.373199 2_1:-72400181 Msa0222970:CDS
TAAACCGAGCAGAAGAGATT+TGG 0.377785 2_1:-72399510 Msa0222970:CDS
GATGTCTTGCTTATATTGTA+TGG 0.379239 2_1:-72399649 Msa0222970:CDS
ATTGAAGCATTTGGTAGGAT+TGG 0.405260 2_1:-72399538 Msa0222970:CDS
TTTCTAACCCTCTTGTCAAC+CGG 0.408917 2_1:+72399259 None:intergenic
AGACTGTAAGTTTCAGCATC+AGG 0.417670 2_1:+72399025 None:intergenic
TTTCATCAAAATATTGTATG+TGG 0.418811 2_1:+72399867 None:intergenic
TAGCTTCCGCATTTCGTAGT+TGG 0.420282 2_1:-72401232 Msa0222970:CDS
TTGTTAGCCATTGAAGCATT+TGG 0.420325 2_1:-72399547 Msa0222970:CDS
GAATTCACAACTAAGCTTCA+TGG 0.422379 2_1:-72400156 Msa0222970:CDS
ATGAAGAAAATGAGGGAATT+GGG 0.423124 2_1:-72400012 Msa0222970:CDS
GGTGATGGAATGGGTAATAA+GGG 0.424602 2_1:-72400223 Msa0222970:CDS
GAAAGAGTTGTCTCCAACCA+TGG 0.425848 2_1:+72399229 None:intergenic
ATGCAGTAAGATATTTCATT+CGG 0.433940 2_1:+72399772 None:intergenic
AGAAGAGATTTGGTCAGAAA+TGG 0.433960 2_1:-72399500 Msa0222970:CDS
AAGACATCGGCACCACGAAC+GGG 0.436628 2_1:+72401194 None:intergenic
TGCATTCCTCGCCGAGCCGC+AGG 0.443711 2_1:-72399948 Msa0222970:CDS
AACTCGTTCTGAAATTCAAC+AGG 0.444891 2_1:+72400099 None:intergenic
AAATCCTTTCCAGCTCCTTC+CGG 0.445340 2_1:+72399614 None:intergenic
ACGTATCGACATCTTGTTCT+GGG 0.450192 2_1:-72399343 Msa0222970:CDS
AATCCTACCAAATGCTTCAA+TGG 0.450377 2_1:+72399540 None:intergenic
TGTCGATACGTTATGGCATT+CGG 0.450425 2_1:+72399355 None:intergenic
AACAAGATGTCGATACGTTA+TGG 0.450954 2_1:+72399348 None:intergenic
TCTAGTTCCCTAGGTCTATA+GGG 0.466383 2_1:+72400195 None:intergenic
TCTTGGGAGCCGGAAGGAGC+TGG 0.467662 2_1:-72399623 Msa0222970:CDS
TAGAAATTCAACCCCATGGT+TGG 0.486994 2_1:-72399242 Msa0222970:CDS
GTTTAGATAAAGGTGTCGTA+AGG 0.489475 2_1:-72400050 Msa0222970:CDS
ATGTCTTGCTTATATTGTAT+GGG 0.493099 2_1:-72399648 Msa0222970:CDS
AGCTTTGAAGACATTAGACT+TGG 0.494188 2_1:-72399293 Msa0222970:CDS
CTGACCAAATCTCTTCTGCT+CGG 0.498246 2_1:+72399506 None:intergenic
AAAAGAGTTTGAAACTGAGA+TGG 0.504861 2_1:+72401324 None:intergenic
TTGAGTACATGAAGAAAATG+AGG 0.507855 2_1:-72400020 Msa0222970:CDS
TTGAGAAGGATGATTCTTGG+AGG 0.513508 2_1:-72399055 Msa0222970:CDS
AATTCACAACTAAGCTTCAT+GGG 0.513711 2_1:-72400155 Msa0222970:CDS
CGTGATGGCTTCCCCGTTCG+TGG 0.515655 2_1:-72401206 Msa0222970:CDS
TTTCGTAGTTGGATGCGTGA+TGG 0.517800 2_1:-72401221 Msa0222970:CDS
AAAGAGTTGTCTCCAACCAT+GGG 0.521395 2_1:+72399230 None:intergenic
CTACTGCCCATGCAGTTGCT+AGG 0.525041 2_1:-72399744 Msa0222970:CDS
AAAGAGTTTGAAACTGAGAT+GGG 0.525372 2_1:+72401325 None:intergenic
GGGTTGCTTGAAATCTGGTA+AGG 0.527556 2_1:-72399323 Msa0222970:CDS
AAAGACATCGGCACCACGAA+CGG 0.536158 2_1:+72401193 None:intergenic
CGGGTTACTTACTCAAATGA+AGG 0.537724 2_1:-72399914 Msa0222970:CDS
TAAGAGTAATCTAGTTCCCT+AGG 0.539356 2_1:+72400186 None:intergenic
AGAATCGAAAAGCTTCCAAA+AGG 0.541136 2_1:-72401263 Msa0222970:CDS
CACTCCATGTTTGCAATACA+CGG 0.548170 2_1:+72399429 None:intergenic
GGAGCCGGAAGGAGCTGGAA+AGG 0.555615 2_1:-72399618 Msa0222970:CDS
GGGAGAGACCCTATAGACCT+AGG 0.556662 2_1:-72400203 Msa0222970:CDS
AGGGAATAATTGGTCAACAT+TGG 0.557672 2_1:-72399671 Msa0222970:CDS
TGTATCATCTTCCTGCGGCT+CGG 0.562004 2_1:+72399937 None:intergenic
TGTATAACCTAGCAACTGCA+TGG 0.564141 2_1:+72399737 None:intergenic
GCTGTGGAGAAATCTATGAC+AGG 0.567821 2_1:-72399691 Msa0222970:CDS
TGAAATGTATGTTGAGGCTG+TGG 0.578376 2_1:-72399707 Msa0222970:CDS
TGTATGGGTATCTTGGGAGC+CGG 0.579555 2_1:-72399633 Msa0222970:CDS
CATCTTCCTGCGGCTCGGCG+AGG 0.581070 2_1:+72399942 None:intergenic
TAGCCATTGAAGCATTTGGT+AGG 0.588265 2_1:-72399543 Msa0222970:CDS
CTTCAATAAACGCGCACTTG+AGG 0.600772 2_1:-72401141 Msa0222970:intron
ACGATCTTGAAAATTTGATG+AGG 0.601050 2_1:-72399828 Msa0222970:CDS
TTTAGATAAAGGTGTCGTAA+GGG 0.604676 2_1:-72400049 Msa0222970:CDS
GGAGAGACCCTATAGACCTA+GGG 0.608274 2_1:-72400202 Msa0222970:CDS
GGGTTAGAAATTCAACCCCA+TGG 0.608497 2_1:-72399246 Msa0222970:CDS
CTGTGGAGAAATCTATGACA+GGG 0.611010 2_1:-72399690 Msa0222970:CDS
GAGTGCTTGACAAAGCAGCT+AGG 0.617656 2_1:-72399411 Msa0222970:CDS
GTATAACCTAGCAACTGCAT+GGG 0.623501 2_1:+72399738 None:intergenic
GCTTTGAAGACATTAGACTT+GGG 0.625561 2_1:-72399292 Msa0222970:CDS
TGAGTACATGAAGAAAATGA+GGG 0.632731 2_1:-72400019 Msa0222970:CDS
ACTAGATTACTCTTATCTGG+TGG 0.633183 2_1:-72400178 Msa0222970:CDS
TATCTAAACAAGCAATCACA+AGG 0.634349 2_1:+72400064 None:intergenic
AGCCGCAGGAAGATGATACA+CGG 0.645693 2_1:-72399934 Msa0222970:CDS
TGGGTATCTTGGGAGCCGGA+AGG 0.646317 2_1:-72399629 Msa0222970:CDS
GTTAATGGTGTGAAAGACAT+CGG 0.649361 2_1:+72401181 None:intergenic
AGACATCGGCACCACGAACG+GGG 0.650644 2_1:+72401195 None:intergenic
ACCCGTGTATCATCTTCCTG+CGG 0.651249 2_1:+72399932 None:intergenic
ATGACCGTGTATTGCAAACA+TGG 0.660433 2_1:-72399433 Msa0222970:CDS
GCCGCAGGAAGATGATACAC+GGG 0.661831 2_1:-72399933 Msa0222970:CDS
AGATGGGTTTCATTGACACA+AGG 0.667945 2_1:+72401341 None:intergenic
AAGCTTCATGGGATTCCACA+CGG 0.668178 2_1:-72400144 Msa0222970:CDS
ACGCATCCAACTACGAAATG+CGG 0.689121 2_1:+72401226 None:intergenic
TGCAACTGAAATGTATGTTG+AGG 0.703650 2_1:-72399713 Msa0222970:CDS
AAGAGTTGTCTCCAACCATG+GGG 0.730200 2_1:+72399231 None:intergenic
ATATTGTATGTGGAAACATG+TGG 0.765769 2_1:+72399877 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCATACTATAACTTCTT+GGG - chr2_1:72399416-72399435 Msa0222970:CDS 20.0%
!!! GTTGTTTTTATAAGTTATCT+TGG - chr2_1:72399698-72399717 Msa0222970:CDS 20.0%
!!! ATTTTTCATAAGCTTTTTTG+AGG + chr2_1:72399741-72399760 None:intergenic 20.0%
!! TTTCATCAAAATATTGTATG+TGG + chr2_1:72400537-72400556 None:intergenic 20.0%
!!! CAATATTTTGATGAAAATAG+AGG - chr2_1:72400541-72400560 Msa0222970:intron 20.0%
!!! TAACTTTTAGATCTAACAAA+GGG + chr2_1:72400833-72400852 None:intergenic 20.0%
!!! ATAACTTTTAGATCTAACAA+AGG + chr2_1:72400834-72400853 None:intergenic 20.0%
!! TGTATATAATACCTTGATTA+AGG - chr2_1:72401288-72401307 Msa0222970:CDS 20.0%
!! TTATCATACTATAACTTCTT+GGG - chr2_1:72399416-72399435 Msa0222970:CDS 20.0%
!!! GTTGTTTTTATAAGTTATCT+TGG - chr2_1:72399698-72399717 Msa0222970:CDS 20.0%
!!! ATTTTTCATAAGCTTTTTTG+AGG + chr2_1:72399741-72399760 None:intergenic 20.0%
!! TTTCATCAAAATATTGTATG+TGG + chr2_1:72400537-72400556 None:intergenic 20.0%
!!! CAATATTTTGATGAAAATAG+AGG - chr2_1:72400541-72400560 Msa0222970:intron 20.0%
!!! TAACTTTTAGATCTAACAAA+GGG + chr2_1:72400833-72400852 None:intergenic 20.0%
!!! ATAACTTTTAGATCTAACAA+AGG + chr2_1:72400834-72400853 None:intergenic 20.0%
!! TGTATATAATACCTTGATTA+AGG - chr2_1:72401288-72401307 Msa0222970:CDS 20.0%
!! GAAAATGATAACTACCATTT+TGG - chr2_1:72399347-72399366 Msa0222970:CDS 25.0%
! ATAAGTTGTTTATCCAAACA+TGG + chr2_1:72399373-72399392 None:intergenic 25.0%
! CTTATCATACTATAACTTCT+TGG - chr2_1:72399415-72399434 Msa0222970:CDS 25.0%
!! GATAATTTTCATCAGCTATA+TGG - chr2_1:72400014-72400033 Msa0222970:CDS 25.0%
! AATATTCAAGTCTCAAACAA+TGG + chr2_1:72400137-72400156 None:intergenic 25.0%
! ATGCAGTAAGATATTTCATT+CGG + chr2_1:72400632-72400651 None:intergenic 25.0%
! ATGTCTTGCTTATATTGTAT+GGG - chr2_1:72400753-72400772 Msa0222970:intron 25.0%
! TTATATTGTATGGGTATCTT+GGG - chr2_1:72400762-72400781 Msa0222970:intron 25.0%
!! AGGATTTGGAGTATTATTAA+AGG - chr2_1:72400803-72400822 Msa0222970:intron 25.0%
! GTACAAAAATATGAAGACAA+AGG - chr2_1:72401015-72401034 Msa0222970:intron 25.0%
!! TTCATAAAGCTAAGTATTGT+AGG - chr2_1:72401257-72401276 Msa0222970:CDS 25.0%
!! TTTTACATAAGCCTTAATCA+AGG + chr2_1:72401302-72401321 None:intergenic 25.0%
!!! ATAATCCAAATCTTTTGAGA+AGG - chr2_1:72401332-72401351 Msa0222970:CDS 25.0%
!! GAAAATGATAACTACCATTT+TGG - chr2_1:72399347-72399366 Msa0222970:CDS 25.0%
! ATAAGTTGTTTATCCAAACA+TGG + chr2_1:72399373-72399392 None:intergenic 25.0%
! CTTATCATACTATAACTTCT+TGG - chr2_1:72399415-72399434 Msa0222970:CDS 25.0%
!! GATAATTTTCATCAGCTATA+TGG - chr2_1:72400014-72400033 Msa0222970:CDS 25.0%
! AATATTCAAGTCTCAAACAA+TGG + chr2_1:72400137-72400156 None:intergenic 25.0%
! ATGCAGTAAGATATTTCATT+CGG + chr2_1:72400632-72400651 None:intergenic 25.0%
! ATGTCTTGCTTATATTGTAT+GGG - chr2_1:72400753-72400772 Msa0222970:intron 25.0%
! TTATATTGTATGGGTATCTT+GGG - chr2_1:72400762-72400781 Msa0222970:intron 25.0%
!! AGGATTTGGAGTATTATTAA+AGG - chr2_1:72400803-72400822 Msa0222970:intron 25.0%
! GTACAAAAATATGAAGACAA+AGG - chr2_1:72401015-72401034 Msa0222970:intron 25.0%
!! TTCATAAAGCTAAGTATTGT+AGG - chr2_1:72401257-72401276 Msa0222970:CDS 25.0%
!! TTTTACATAAGCCTTAATCA+AGG + chr2_1:72401302-72401321 None:intergenic 25.0%
!!! ATAATCCAAATCTTTTGAGA+AGG - chr2_1:72401332-72401351 Msa0222970:CDS 25.0%
! AAAGAGTTTGAAACTGAGAT+GGG + chr2_1:72399079-72399098 None:intergenic 30.0%
! AAAAGAGTTTGAAACTGAGA+TGG + chr2_1:72399080-72399099 None:intergenic 30.0%
!! CTTATTTTCACAAAGTCTCT+AGG + chr2_1:72399521-72399540 None:intergenic 30.0%
ACAAGCTATTTATCCAAACA+AGG + chr2_1:72399602-72399621 None:intergenic 30.0%
TCAAATAAACCAATCCAAAG+AGG - chr2_1:72399828-72399847 Msa0222970:CDS 30.0%
AGACAAAACACAGACAAATT+GGG + chr2_1:72399854-72399873 None:intergenic 30.0%
TAGACAAAACACAGACAAAT+TGG + chr2_1:72399855-72399874 None:intergenic 30.0%
! ATTTGTCTGTGTTTTGTCTA+AGG - chr2_1:72399855-72399874 Msa0222970:CDS 30.0%
AACACATAAAGACACTGTTT+GGG + chr2_1:72400104-72400123 None:intergenic 30.0%
GTGTCTTTATGTGTTGTATA+CGG - chr2_1:72400109-72400128 Msa0222970:CDS 30.0%
! TTACTCTTCTGACTTTTGAT+AGG - chr2_1:72400157-72400176 Msa0222970:CDS 30.0%
AATTCACAACTAAGCTTCAT+GGG - chr2_1:72400246-72400265 Msa0222970:intron 30.0%
TATCTAAACAAGCAATCACA+AGG + chr2_1:72400340-72400359 None:intergenic 30.0%
GTGATTGCTTGTTTAGATAA+AGG - chr2_1:72400341-72400360 Msa0222970:intron 30.0%
!! TTTAGATAAAGGTGTCGTAA+GGG - chr2_1:72400352-72400371 Msa0222970:intron 30.0%
TTGAGTACATGAAGAAAATG+AGG - chr2_1:72400381-72400400 Msa0222970:intron 30.0%
TGAGTACATGAAGAAAATGA+GGG - chr2_1:72400382-72400401 Msa0222970:intron 30.0%
ATGAAGAAAATGAGGGAATT+GGG - chr2_1:72400389-72400408 Msa0222970:intron 30.0%
TTAAAGACCAAATGCGAAAT+AGG + chr2_1:72400419-72400438 None:intergenic 30.0%
ATATTGTATGTGGAAACATG+TGG + chr2_1:72400527-72400546 None:intergenic 30.0%
!! ATTTTCAAGATCGTGTTCAT+TGG + chr2_1:72400567-72400586 None:intergenic 30.0%
ACGATCTTGAAAATTTGATG+AGG - chr2_1:72400573-72400592 Msa0222970:intron 30.0%
!!! GGTTTTTTGATCGAATGAAA+CGG - chr2_1:72400594-72400613 Msa0222970:intron 30.0%
!!! GTTTTTTGATCGAATGAAAC+GGG - chr2_1:72400595-72400614 Msa0222970:intron 30.0%
AATCTATGACAGGGAATAAT+TGG - chr2_1:72400720-72400739 Msa0222970:intron 30.0%
GATGTCTTGCTTATATTGTA+TGG - chr2_1:72400752-72400771 Msa0222970:intron 30.0%
CTTATATTGTATGGGTATCT+TGG - chr2_1:72400761-72400780 Msa0222970:intron 30.0%
TCAGAAATGGAATCAGTAAA+AGG - chr2_1:72400914-72400933 Msa0222970:intron 30.0%
ATCATCCTTCTCAAAAGATT+TGG + chr2_1:72401340-72401359 None:intergenic 30.0%
TGAAAATTGCTGAACAGTTT+CGG - chr2_1:72401401-72401420 Msa0222970:CDS 30.0%
! AAAGAGTTTGAAACTGAGAT+GGG + chr2_1:72399079-72399098 None:intergenic 30.0%
! AAAAGAGTTTGAAACTGAGA+TGG + chr2_1:72399080-72399099 None:intergenic 30.0%
!! CTTATTTTCACAAAGTCTCT+AGG + chr2_1:72399521-72399540 None:intergenic 30.0%
ACAAGCTATTTATCCAAACA+AGG + chr2_1:72399602-72399621 None:intergenic 30.0%
TCAAATAAACCAATCCAAAG+AGG - chr2_1:72399828-72399847 Msa0222970:CDS 30.0%
AGACAAAACACAGACAAATT+GGG + chr2_1:72399854-72399873 None:intergenic 30.0%
TAGACAAAACACAGACAAAT+TGG + chr2_1:72399855-72399874 None:intergenic 30.0%
! ATTTGTCTGTGTTTTGTCTA+AGG - chr2_1:72399855-72399874 Msa0222970:CDS 30.0%
AACACATAAAGACACTGTTT+GGG + chr2_1:72400104-72400123 None:intergenic 30.0%
GTGTCTTTATGTGTTGTATA+CGG - chr2_1:72400109-72400128 Msa0222970:CDS 30.0%
! TTACTCTTCTGACTTTTGAT+AGG - chr2_1:72400157-72400176 Msa0222970:CDS 30.0%
AATTCACAACTAAGCTTCAT+GGG - chr2_1:72400246-72400265 Msa0222970:intron 30.0%
TATCTAAACAAGCAATCACA+AGG + chr2_1:72400340-72400359 None:intergenic 30.0%
GTGATTGCTTGTTTAGATAA+AGG - chr2_1:72400341-72400360 Msa0222970:intron 30.0%
!! TTTAGATAAAGGTGTCGTAA+GGG - chr2_1:72400352-72400371 Msa0222970:intron 30.0%
TTGAGTACATGAAGAAAATG+AGG - chr2_1:72400381-72400400 Msa0222970:intron 30.0%
TGAGTACATGAAGAAAATGA+GGG - chr2_1:72400382-72400401 Msa0222970:intron 30.0%
ATGAAGAAAATGAGGGAATT+GGG - chr2_1:72400389-72400408 Msa0222970:intron 30.0%
TTAAAGACCAAATGCGAAAT+AGG + chr2_1:72400419-72400438 None:intergenic 30.0%
ATATTGTATGTGGAAACATG+TGG + chr2_1:72400527-72400546 None:intergenic 30.0%
!! ATTTTCAAGATCGTGTTCAT+TGG + chr2_1:72400567-72400586 None:intergenic 30.0%
ACGATCTTGAAAATTTGATG+AGG - chr2_1:72400573-72400592 Msa0222970:intron 30.0%
!!! GGTTTTTTGATCGAATGAAA+CGG - chr2_1:72400594-72400613 Msa0222970:intron 30.0%
!!! GTTTTTTGATCGAATGAAAC+GGG - chr2_1:72400595-72400614 Msa0222970:intron 30.0%
AATCTATGACAGGGAATAAT+TGG - chr2_1:72400720-72400739 Msa0222970:intron 30.0%
GATGTCTTGCTTATATTGTA+TGG - chr2_1:72400752-72400771 Msa0222970:intron 30.0%
CTTATATTGTATGGGTATCT+TGG - chr2_1:72400761-72400780 Msa0222970:intron 30.0%
TCAGAAATGGAATCAGTAAA+AGG - chr2_1:72400914-72400933 Msa0222970:intron 30.0%
ATCATCCTTCTCAAAAGATT+TGG + chr2_1:72401340-72401359 None:intergenic 30.0%
TGAAAATTGCTGAACAGTTT+CGG - chr2_1:72401401-72401420 Msa0222970:CDS 30.0%
TTCTCTTACACAAGCTATCT+TGG + chr2_1:72399122-72399141 None:intergenic 35.0%
AGAATCGAAAAGCTTCCAAA+AGG - chr2_1:72399138-72399157 Msa0222970:CDS 35.0%
! GAAGCTATAGATTCTCCTTT+TGG + chr2_1:72399156-72399175 None:intergenic 35.0%
GTTAATGGTGTGAAAGACAT+CGG + chr2_1:72399223-72399242 None:intergenic 35.0%
!! TGAAGTTGAGTTTTCTGAGA+CGG + chr2_1:72399245-72399264 None:intergenic 35.0%
TTATCCAAACATGGCCAAAA+TGG + chr2_1:72399364-72399383 None:intergenic 35.0%
! TATTTTGCAGCTTATAGCAC+AGG - chr2_1:72399390-72399409 Msa0222970:CDS 35.0%
! ATTTTGCAGCTTATAGCACA+GGG - chr2_1:72399391-72399410 Msa0222970:CDS 35.0%
CAACACATAAAGACACTGTT+TGG + chr2_1:72400105-72400124 None:intergenic 35.0%
! TTCTGACTTTTGATAGGTGA+TGG - chr2_1:72400163-72400182 Msa0222970:CDS 35.0%
!!! ACTTTTGATAGGTGATGGAA+TGG - chr2_1:72400168-72400187 Msa0222970:CDS 35.0%
!!! CTTTTGATAGGTGATGGAAT+GGG - chr2_1:72400169-72400188 Msa0222970:CDS 35.0%
! TAAGAGTAATCTAGTTCCCT+AGG + chr2_1:72400218-72400237 None:intergenic 35.0%
GGAACTAGATTACTCTTATC+TGG - chr2_1:72400220-72400239 Msa0222970:CDS 35.0%
ACTAGATTACTCTTATCTGG+TGG - chr2_1:72400223-72400242 Msa0222970:CDS 35.0%
GAATTCACAACTAAGCTTCA+TGG - chr2_1:72400245-72400264 Msa0222970:intron 35.0%
!! AACTCGTTCTGAAATTCAAC+AGG + chr2_1:72400305-72400324 None:intergenic 35.0%
!! GTTTAGATAAAGGTGTCGTA+AGG - chr2_1:72400351-72400370 Msa0222970:intron 35.0%
CATGAAGAAAATGAGGGAAT+TGG - chr2_1:72400388-72400407 Msa0222970:intron 35.0%
TGCAACTGAAATGTATGTTG+AGG - chr2_1:72400688-72400707 Msa0222970:intron 35.0%
AGGGAATAATTGGTCAACAT+TGG - chr2_1:72400730-72400749 Msa0222970:intron 35.0%
! TTGTTAGCCATTGAAGCATT+TGG - chr2_1:72400854-72400873 Msa0222970:intron 35.0%
AATCCTACCAAATGCTTCAA+TGG + chr2_1:72400864-72400883 None:intergenic 35.0%
! ATTGAAGCATTTGGTAGGAT+TGG - chr2_1:72400863-72400882 Msa0222970:intron 35.0%
! AGAAGAGATTTGGTCAGAAA+TGG - chr2_1:72400901-72400920 Msa0222970:intron 35.0%
AACAAGATGTCGATACGTTA+TGG + chr2_1:72401056-72401075 None:intergenic 35.0%
!! AGCTTTGAAGACATTAGACT+TGG - chr2_1:72401108-72401127 Msa0222970:intron 35.0%
!! GCTTTGAAGACATTAGACTT+GGG - chr2_1:72401109-72401128 Msa0222970:intron 35.0%
! CTGAGCTTTTTGCTGAAAAA+GGG - chr2_1:72401200-72401219 Msa0222970:CDS 35.0%
! TGAGCTTTTTGCTGAAAAAG+GGG - chr2_1:72401201-72401220 Msa0222970:CDS 35.0%
!! CTTTTGAGAAGGATGATTCT+TGG - chr2_1:72401343-72401362 Msa0222970:CDS 35.0%
TTCTCTTACACAAGCTATCT+TGG + chr2_1:72399122-72399141 None:intergenic 35.0%
AGAATCGAAAAGCTTCCAAA+AGG - chr2_1:72399138-72399157 Msa0222970:CDS 35.0%
! GAAGCTATAGATTCTCCTTT+TGG + chr2_1:72399156-72399175 None:intergenic 35.0%
GTTAATGGTGTGAAAGACAT+CGG + chr2_1:72399223-72399242 None:intergenic 35.0%
!! TGAAGTTGAGTTTTCTGAGA+CGG + chr2_1:72399245-72399264 None:intergenic 35.0%
TTATCCAAACATGGCCAAAA+TGG + chr2_1:72399364-72399383 None:intergenic 35.0%
! TATTTTGCAGCTTATAGCAC+AGG - chr2_1:72399390-72399409 Msa0222970:CDS 35.0%
! ATTTTGCAGCTTATAGCACA+GGG - chr2_1:72399391-72399410 Msa0222970:CDS 35.0%
CAACACATAAAGACACTGTT+TGG + chr2_1:72400105-72400124 None:intergenic 35.0%
! TTCTGACTTTTGATAGGTGA+TGG - chr2_1:72400163-72400182 Msa0222970:CDS 35.0%
!!! ACTTTTGATAGGTGATGGAA+TGG - chr2_1:72400168-72400187 Msa0222970:CDS 35.0%
!!! CTTTTGATAGGTGATGGAAT+GGG - chr2_1:72400169-72400188 Msa0222970:CDS 35.0%
! TAAGAGTAATCTAGTTCCCT+AGG + chr2_1:72400218-72400237 None:intergenic 35.0%
GGAACTAGATTACTCTTATC+TGG - chr2_1:72400220-72400239 Msa0222970:CDS 35.0%
ACTAGATTACTCTTATCTGG+TGG - chr2_1:72400223-72400242 Msa0222970:CDS 35.0%
GAATTCACAACTAAGCTTCA+TGG - chr2_1:72400245-72400264 Msa0222970:intron 35.0%
!! AACTCGTTCTGAAATTCAAC+AGG + chr2_1:72400305-72400324 None:intergenic 35.0%
!! GTTTAGATAAAGGTGTCGTA+AGG - chr2_1:72400351-72400370 Msa0222970:intron 35.0%
CATGAAGAAAATGAGGGAAT+TGG - chr2_1:72400388-72400407 Msa0222970:intron 35.0%
TGCAACTGAAATGTATGTTG+AGG - chr2_1:72400688-72400707 Msa0222970:intron 35.0%
AGGGAATAATTGGTCAACAT+TGG - chr2_1:72400730-72400749 Msa0222970:intron 35.0%
! TTGTTAGCCATTGAAGCATT+TGG - chr2_1:72400854-72400873 Msa0222970:intron 35.0%
AATCCTACCAAATGCTTCAA+TGG + chr2_1:72400864-72400883 None:intergenic 35.0%
! ATTGAAGCATTTGGTAGGAT+TGG - chr2_1:72400863-72400882 Msa0222970:intron 35.0%
! AGAAGAGATTTGGTCAGAAA+TGG - chr2_1:72400901-72400920 Msa0222970:intron 35.0%
AACAAGATGTCGATACGTTA+TGG + chr2_1:72401056-72401075 None:intergenic 35.0%
!! AGCTTTGAAGACATTAGACT+TGG - chr2_1:72401108-72401127 Msa0222970:intron 35.0%
!! GCTTTGAAGACATTAGACTT+GGG - chr2_1:72401109-72401128 Msa0222970:intron 35.0%
! CTGAGCTTTTTGCTGAAAAA+GGG - chr2_1:72401200-72401219 Msa0222970:CDS 35.0%
! TGAGCTTTTTGCTGAAAAAG+GGG - chr2_1:72401201-72401220 Msa0222970:CDS 35.0%
!! CTTTTGAGAAGGATGATTCT+TGG - chr2_1:72401343-72401362 Msa0222970:CDS 35.0%
! AGATGGGTTTCATTGACACA+AGG + chr2_1:72399063-72399082 None:intergenic 40.0%
!!! GAGTTTTCTGAGACGGTTAA+TGG + chr2_1:72399238-72399257 None:intergenic 40.0%
!! ACTACCATTTTGGCCATGTT+TGG - chr2_1:72399357-72399376 Msa0222970:CDS 40.0%
! TTTTGCAGCTTATAGCACAG+GGG - chr2_1:72399392-72399411 Msa0222970:CDS 40.0%
TCACGAGTTCTTCCAAACAT+TGG - chr2_1:72399576-72399595 Msa0222970:CDS 40.0%
!! TTCCAAACATTGGCCTTGTT+TGG - chr2_1:72399586-72399605 Msa0222970:CDS 40.0%
ATCCAAACAAGGCCAATGTT+TGG + chr2_1:72399591-72399610 None:intergenic 40.0%
!! AGGTGATGGAATGGGTAATA+AGG - chr2_1:72400177-72400196 Msa0222970:CDS 40.0%
!! GGTGATGGAATGGGTAATAA+GGG - chr2_1:72400178-72400197 Msa0222970:CDS 40.0%
! TCTAGTTCCCTAGGTCTATA+GGG + chr2_1:72400209-72400228 None:intergenic 40.0%
! ATCTAGTTCCCTAGGTCTAT+AGG + chr2_1:72400210-72400229 None:intergenic 40.0%
CGGGTTACTTACTCAAATGA+AGG - chr2_1:72400487-72400506 Msa0222970:intron 40.0%
GTATAACCTAGCAACTGCAT+GGG + chr2_1:72400666-72400685 None:intergenic 40.0%
TGTATAACCTAGCAACTGCA+TGG + chr2_1:72400667-72400686 None:intergenic 40.0%
TGAAATGTATGTTGAGGCTG+TGG - chr2_1:72400694-72400713 Msa0222970:intron 40.0%
CTGTGGAGAAATCTATGACA+GGG - chr2_1:72400711-72400730 Msa0222970:intron 40.0%
! TAGCCATTGAAGCATTTGGT+AGG - chr2_1:72400858-72400877 Msa0222970:intron 40.0%
TAAACCGAGCAGAAGAGATT+TGG - chr2_1:72400891-72400910 Msa0222970:intron 40.0%
ATGACCGTGTATTGCAAACA+TGG - chr2_1:72400968-72400987 Msa0222970:intron 40.0%
CACTCCATGTTTGCAATACA+CGG + chr2_1:72400975-72400994 None:intergenic 40.0%
TGTCGATACGTTATGGCATT+CGG + chr2_1:72401049-72401068 None:intergenic 40.0%
! AACGTATCGACATCTTGTTC+TGG - chr2_1:72401057-72401076 Msa0222970:intron 40.0%
! ACGTATCGACATCTTGTTCT+GGG - chr2_1:72401058-72401077 Msa0222970:intron 40.0%
TTTCTAACCCTCTTGTCAAC+CGG + chr2_1:72401145-72401164 None:intergenic 40.0%
TAGAAATTCAACCCCATGGT+TGG - chr2_1:72401159-72401178 Msa0222970:CDS 40.0%
AAAGAGTTGTCTCCAACCAT+GGG + chr2_1:72401174-72401193 None:intergenic 40.0%
! GCTGAGCTTTTTGCTGAAAA+AGG - chr2_1:72401199-72401218 Msa0222970:CDS 40.0%
TTGAGAAGGATGATTCTTGG+AGG - chr2_1:72401346-72401365 Msa0222970:CDS 40.0%
AGACTGTAAGTTTCAGCATC+AGG + chr2_1:72401379-72401398 None:intergenic 40.0%
! AGATGGGTTTCATTGACACA+AGG + chr2_1:72399063-72399082 None:intergenic 40.0%
!!! GAGTTTTCTGAGACGGTTAA+TGG + chr2_1:72399238-72399257 None:intergenic 40.0%
!! ACTACCATTTTGGCCATGTT+TGG - chr2_1:72399357-72399376 Msa0222970:CDS 40.0%
! TTTTGCAGCTTATAGCACAG+GGG - chr2_1:72399392-72399411 Msa0222970:CDS 40.0%
TCACGAGTTCTTCCAAACAT+TGG - chr2_1:72399576-72399595 Msa0222970:CDS 40.0%
!! TTCCAAACATTGGCCTTGTT+TGG - chr2_1:72399586-72399605 Msa0222970:CDS 40.0%
ATCCAAACAAGGCCAATGTT+TGG + chr2_1:72399591-72399610 None:intergenic 40.0%
!! AGGTGATGGAATGGGTAATA+AGG - chr2_1:72400177-72400196 Msa0222970:CDS 40.0%
!! GGTGATGGAATGGGTAATAA+GGG - chr2_1:72400178-72400197 Msa0222970:CDS 40.0%
! TCTAGTTCCCTAGGTCTATA+GGG + chr2_1:72400209-72400228 None:intergenic 40.0%
! ATCTAGTTCCCTAGGTCTAT+AGG + chr2_1:72400210-72400229 None:intergenic 40.0%
CGGGTTACTTACTCAAATGA+AGG - chr2_1:72400487-72400506 Msa0222970:intron 40.0%
GTATAACCTAGCAACTGCAT+GGG + chr2_1:72400666-72400685 None:intergenic 40.0%
TGTATAACCTAGCAACTGCA+TGG + chr2_1:72400667-72400686 None:intergenic 40.0%
TGAAATGTATGTTGAGGCTG+TGG - chr2_1:72400694-72400713 Msa0222970:intron 40.0%
CTGTGGAGAAATCTATGACA+GGG - chr2_1:72400711-72400730 Msa0222970:intron 40.0%
! TAGCCATTGAAGCATTTGGT+AGG - chr2_1:72400858-72400877 Msa0222970:intron 40.0%
TAAACCGAGCAGAAGAGATT+TGG - chr2_1:72400891-72400910 Msa0222970:intron 40.0%
ATGACCGTGTATTGCAAACA+TGG - chr2_1:72400968-72400987 Msa0222970:intron 40.0%
CACTCCATGTTTGCAATACA+CGG + chr2_1:72400975-72400994 None:intergenic 40.0%
TGTCGATACGTTATGGCATT+CGG + chr2_1:72401049-72401068 None:intergenic 40.0%
! AACGTATCGACATCTTGTTC+TGG - chr2_1:72401057-72401076 Msa0222970:intron 40.0%
! ACGTATCGACATCTTGTTCT+GGG - chr2_1:72401058-72401077 Msa0222970:intron 40.0%
TTTCTAACCCTCTTGTCAAC+CGG + chr2_1:72401145-72401164 None:intergenic 40.0%
TAGAAATTCAACCCCATGGT+TGG - chr2_1:72401159-72401178 Msa0222970:CDS 40.0%
AAAGAGTTGTCTCCAACCAT+GGG + chr2_1:72401174-72401193 None:intergenic 40.0%
! GCTGAGCTTTTTGCTGAAAA+AGG - chr2_1:72401199-72401218 Msa0222970:CDS 40.0%
TTGAGAAGGATGATTCTTGG+AGG - chr2_1:72401346-72401365 Msa0222970:CDS 40.0%
AGACTGTAAGTTTCAGCATC+AGG + chr2_1:72401379-72401398 None:intergenic 40.0%
TAGCTTCCGCATTTCGTAGT+TGG - chr2_1:72399169-72399188 Msa0222970:CDS 45.0%
ACGCATCCAACTACGAAATG+CGG + chr2_1:72399178-72399197 None:intergenic 45.0%
TTTCGTAGTTGGATGCGTGA+TGG - chr2_1:72399180-72399199 Msa0222970:CDS 45.0%
CTTCAATAAACGCGCACTTG+AGG - chr2_1:72399260-72399279 Msa0222970:CDS 45.0%
CAAATTGGGCCTCTTTGGAT+TGG + chr2_1:72399840-72399859 None:intergenic 45.0%
ACAGACAAATTGGGCCTCTT+TGG + chr2_1:72399845-72399864 None:intergenic 45.0%
! GTCTAAGGCTCCATTGTCTT+TGG - chr2_1:72399870-72399889 Msa0222970:CDS 45.0%
CCAAACAGAGCCAAAGACAA+TGG + chr2_1:72399883-72399902 None:intergenic 45.0%
!! CCATTGTCTTTGGCTCTGTT+TGG - chr2_1:72399880-72399899 Msa0222970:CDS 45.0%
AAGCTTCATGGGATTCCACA+CGG - chr2_1:72400257-72400276 Msa0222970:intron 45.0%
GGGTCATCCTATTTCGCATT+TGG - chr2_1:72400409-72400428 Msa0222970:intron 45.0%
GCTGTGGAGAAATCTATGAC+AGG - chr2_1:72400710-72400729 Msa0222970:intron 45.0%
AAATCCTTTCCAGCTCCTTC+CGG + chr2_1:72400790-72400809 None:intergenic 45.0%
CTGACCAAATCTCTTCTGCT+CGG + chr2_1:72400898-72400917 None:intergenic 45.0%
! GTTCTGGGTTGCTTGAAATC+TGG - chr2_1:72401073-72401092 Msa0222970:intron 45.0%
GGGTTGCTTGAAATCTGGTA+AGG - chr2_1:72401078-72401097 Msa0222970:intron 45.0%
GGGTTAGAAATTCAACCCCA+TGG - chr2_1:72401155-72401174 Msa0222970:CDS 45.0%
AAGAGTTGTCTCCAACCATG+GGG + chr2_1:72401173-72401192 None:intergenic 45.0%
GAAAGAGTTGTCTCCAACCA+TGG + chr2_1:72401175-72401194 None:intergenic 45.0%
TAGCTTCCGCATTTCGTAGT+TGG - chr2_1:72399169-72399188 Msa0222970:CDS 45.0%
ACGCATCCAACTACGAAATG+CGG + chr2_1:72399178-72399197 None:intergenic 45.0%
TTTCGTAGTTGGATGCGTGA+TGG - chr2_1:72399180-72399199 Msa0222970:CDS 45.0%
CTTCAATAAACGCGCACTTG+AGG - chr2_1:72399260-72399279 Msa0222970:CDS 45.0%
CAAATTGGGCCTCTTTGGAT+TGG + chr2_1:72399840-72399859 None:intergenic 45.0%
ACAGACAAATTGGGCCTCTT+TGG + chr2_1:72399845-72399864 None:intergenic 45.0%
! GTCTAAGGCTCCATTGTCTT+TGG - chr2_1:72399870-72399889 Msa0222970:CDS 45.0%
CCAAACAGAGCCAAAGACAA+TGG + chr2_1:72399883-72399902 None:intergenic 45.0%
!! CCATTGTCTTTGGCTCTGTT+TGG - chr2_1:72399880-72399899 Msa0222970:CDS 45.0%
AAGCTTCATGGGATTCCACA+CGG - chr2_1:72400257-72400276 Msa0222970:intron 45.0%
GGGTCATCCTATTTCGCATT+TGG - chr2_1:72400409-72400428 Msa0222970:intron 45.0%
GCTGTGGAGAAATCTATGAC+AGG - chr2_1:72400710-72400729 Msa0222970:intron 45.0%
AAATCCTTTCCAGCTCCTTC+CGG + chr2_1:72400790-72400809 None:intergenic 45.0%
CTGACCAAATCTCTTCTGCT+CGG + chr2_1:72400898-72400917 None:intergenic 45.0%
! GTTCTGGGTTGCTTGAAATC+TGG - chr2_1:72401073-72401092 Msa0222970:intron 45.0%
GGGTTGCTTGAAATCTGGTA+AGG - chr2_1:72401078-72401097 Msa0222970:intron 45.0%
GGGTTAGAAATTCAACCCCA+TGG - chr2_1:72401155-72401174 Msa0222970:CDS 45.0%
AAGAGTTGTCTCCAACCATG+GGG + chr2_1:72401173-72401192 None:intergenic 45.0%
GAAAGAGTTGTCTCCAACCA+TGG + chr2_1:72401175-72401194 None:intergenic 45.0%
AAAGACATCGGCACCACGAA+CGG + chr2_1:72399211-72399230 None:intergenic 50.0%
GGAGAGACCCTATAGACCTA+GGG - chr2_1:72400199-72400218 Msa0222970:CDS 50.0%
! GTGAAGAGCTTTTCACCGTG+TGG + chr2_1:72400275-72400294 None:intergenic 50.0%
TGTATCATCTTCCTGCGGCT+CGG + chr2_1:72400467-72400486 None:intergenic 50.0%
AGCCGCAGGAAGATGATACA+CGG - chr2_1:72400467-72400486 Msa0222970:intron 50.0%
ACCCGTGTATCATCTTCCTG+CGG + chr2_1:72400472-72400491 None:intergenic 50.0%
TGTATGGGTATCTTGGGAGC+CGG - chr2_1:72400768-72400787 Msa0222970:intron 50.0%
GGAAGGAGCTGGAAAGGATT+TGG - chr2_1:72400789-72400808 Msa0222970:intron 50.0%
GAGTGCTTGACAAAGCAGCT+AGG - chr2_1:72400990-72401009 Msa0222970:intron 50.0%
! AGACTTGGGCATGCGTTTTC+CGG - chr2_1:72401123-72401142 Msa0222970:intron 50.0%
! TGCGTTTTCCGGTTGACAAG+AGG - chr2_1:72401134-72401153 Msa0222970:intron 50.0%
! GCGTTTTCCGGTTGACAAGA+GGG - chr2_1:72401135-72401154 Msa0222970:intron 50.0%
AAAGACATCGGCACCACGAA+CGG + chr2_1:72399211-72399230 None:intergenic 50.0%
GGAGAGACCCTATAGACCTA+GGG - chr2_1:72400199-72400218 Msa0222970:CDS 50.0%
! GTGAAGAGCTTTTCACCGTG+TGG + chr2_1:72400275-72400294 None:intergenic 50.0%
TGTATCATCTTCCTGCGGCT+CGG + chr2_1:72400467-72400486 None:intergenic 50.0%
AGCCGCAGGAAGATGATACA+CGG - chr2_1:72400467-72400486 Msa0222970:intron 50.0%
ACCCGTGTATCATCTTCCTG+CGG + chr2_1:72400472-72400491 None:intergenic 50.0%
TGTATGGGTATCTTGGGAGC+CGG - chr2_1:72400768-72400787 Msa0222970:intron 50.0%
GGAAGGAGCTGGAAAGGATT+TGG - chr2_1:72400789-72400808 Msa0222970:intron 50.0%
GAGTGCTTGACAAAGCAGCT+AGG - chr2_1:72400990-72401009 Msa0222970:intron 50.0%
! AGACTTGGGCATGCGTTTTC+CGG - chr2_1:72401123-72401142 Msa0222970:intron 50.0%
! TGCGTTTTCCGGTTGACAAG+AGG - chr2_1:72401134-72401153 Msa0222970:intron 50.0%
! GCGTTTTCCGGTTGACAAGA+GGG - chr2_1:72401135-72401154 Msa0222970:intron 50.0%
AAGACATCGGCACCACGAAC+GGG + chr2_1:72399210-72399229 None:intergenic 55.0%
GGGAGAGACCCTATAGACCT+AGG - chr2_1:72400198-72400217 Msa0222970:CDS 55.0%
GCCGCAGGAAGATGATACAC+GGG - chr2_1:72400468-72400487 Msa0222970:intron 55.0%
CTACTGCCCATGCAGTTGCT+AGG - chr2_1:72400657-72400676 Msa0222970:intron 55.0%
AAGACATCGGCACCACGAAC+GGG + chr2_1:72399210-72399229 None:intergenic 55.0%
GGGAGAGACCCTATAGACCT+AGG - chr2_1:72400198-72400217 Msa0222970:CDS 55.0%
GCCGCAGGAAGATGATACAC+GGG - chr2_1:72400468-72400487 Msa0222970:intron 55.0%
CTACTGCCCATGCAGTTGCT+AGG - chr2_1:72400657-72400676 Msa0222970:intron 55.0%
AGACATCGGCACCACGAACG+GGG + chr2_1:72399209-72399228 None:intergenic 60.0%
TGGGTATCTTGGGAGCCGGA+AGG - chr2_1:72400772-72400791 Msa0222970:intron 60.0%
AGACATCGGCACCACGAACG+GGG + chr2_1:72399209-72399228 None:intergenic 60.0%
TGGGTATCTTGGGAGCCGGA+AGG - chr2_1:72400772-72400791 Msa0222970:intron 60.0%
CGTGATGGCTTCCCCGTTCG+TGG - chr2_1:72399195-72399214 Msa0222970:CDS 65.0%
TCTTGGGAGCCGGAAGGAGC+TGG - chr2_1:72400778-72400797 Msa0222970:intron 65.0%
GGAGCCGGAAGGAGCTGGAA+AGG - chr2_1:72400783-72400802 Msa0222970:intron 65.0%
CGTGATGGCTTCCCCGTTCG+TGG - chr2_1:72399195-72399214 Msa0222970:CDS 65.0%
TCTTGGGAGCCGGAAGGAGC+TGG - chr2_1:72400778-72400797 Msa0222970:intron 65.0%
GGAGCCGGAAGGAGCTGGAA+AGG - chr2_1:72400783-72400802 Msa0222970:intron 65.0%
TGCATTCCTCGCCGAGCCGC+AGG - chr2_1:72400453-72400472 Msa0222970:intron 70.0%
! CATCTTCCTGCGGCTCGGCG+AGG + chr2_1:72400462-72400481 None:intergenic 70.0%
TGCATTCCTCGCCGAGCCGC+AGG - chr2_1:72400453-72400472 Msa0222970:intron 70.0%
! CATCTTCCTGCGGCTCGGCG+AGG + chr2_1:72400462-72400481 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72398994 72401429 72398994 ID=Msa0222970;Name=Msa0222970
chr2_1 mRNA 72398994 72401429 72398994 ID=Msa0222970-mRNA-1;Parent=Msa0222970;Name=Msa0222970-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0|1|1|1|2|0|512
chr2_1 exon 72401142 72401429 72401142 ID=Msa0222970-mRNA-1:exon:20962;Parent=Msa0222970-mRNA-1
chr2_1 exon 72398994 72400244 72398994 ID=Msa0222970-mRNA-1:exon:20961;Parent=Msa0222970-mRNA-1
chr2_1 CDS 72401142 72401429 72401142 ID=Msa0222970-mRNA-1:cds;Parent=Msa0222970-mRNA-1
chr2_1 CDS 72398994 72400244 72398994 ID=Msa0222970-mRNA-1:cds;Parent=Msa0222970-mRNA-1
Gene Sequence

>Msa0222970

ATGAGCATGCGAAATCTAATGAGTATAGCAATACGCGCGAAGTTCATAGAGACAATACGTCGAACACCTTGTGTCAATGAAACCCATCTCAGTTTCAAACTCTTTTGCACACAAACAACTCAAGACCAAGATAGCTTGTGTAAGAGAATCGAAAAGCTTCCAAAAGGAGAATCTATAGCTTCCGCATTTCGTAGTTGGATGCGTGATGGCTTCCCCGTTCGTGGTGCCGATGTCTTTCACACCATTAACCGTCTCAGAAAACTCAACTTCAATAAACGCGCACTTGAGGTGATGGAATGGGTAATAAGGGAGAGACCCTATAGACCTAGGGAACTAGATTACTCTTATCTGGTGGAATTCACAACTAAGCTTCATGGGATTCCACACGGTGAAAAGCTCTTCACTCGTGTTCCTGTTGAATTTCAGAACGAGTTACTCTATAACAACCTTGTGATTGCTTGTTTAGATAAAGGTGTCGTAAGGGTTTCACTTGAGTACATGAAGAAAATGAGGGAATTGGGTCATCCTATTTCGCATTTGGTCTTTAATCGCTTGATAATTCTGCATTCCTCGCCGAGCCGCAGGAAGATGATACACGGGTTACTTACTCAAATGAAGGCTGATAAAGTCACGCCACATGTTTCCACATACAATATTTTGATGAAAATAGAGGCCAATGAACACGATCTTGAAAATTTGATGAGGTTTTTTGATCGAATGAAACGGGTGCATGTTGAACCGAATGAAATATCTTACTGCATTTTAGCTACTGCCCATGCAGTTGCTAGGTTATACACTGCAACTGAAATGTATGTTGAGGCTGTGGAGAAATCTATGACAGGGAATAATTGGTCAACATTGGATGTCTTGCTTATATTGTATGGGTATCTTGGGAGCCGGAAGGAGCTGGAAAGGATTTGGAGTATTATTAAAGGACTTCCCTTTGTTAGATCTAAAAGTTATTTGTTAGCCATTGAAGCATTTGGTAGGATTGGAGAGTTAAACCGAGCAGAAGAGATTTGGTCAGAAATGGAATCAGTAAAAGGATTGAAATCTGTAGAGCAATTTAATTCAATGATGACCGTGTATTGCAAACATGGAGTGCTTGACAAAGCAGCTAGGTTGTACAAAAATATGAAGACAAAGGAGTGCAAACCGAATGCCATAACGTATCGACATCTTGTTCTGGGTTGCTTGAAATCTGGTAAGGCAGAGCAAGCTTTGAAGACATTAGACTTGGGCATGCGTTTTCCGGTTGACAAGAGGGTTAGAAATTCAACCCCATGGTTGGAGACAACTCTTTCAATTGCTGAGCTTTTTGCTGAAAAAGGGGATGTTGAAAATGTTGAGCGACTGTTTGAAGAATTTCATAAAGCTAAGTATTGTAGGTATACTTTTGTATATAATACCTTGATTAAGGCTTATGTAAAAGCTAAGATTTATAATCCAAATCTTTTGAGAAGGATGATTCTTGGAGGAGCAAATCCTGATGCTGAAACTTACAGTCTTTTGAAAATTGCTGAACAGTTTCGGACCTGA
Protein sequence

>Msa0222970

MSMRNLMSIAIRAKFIETIRRTPCVNETHLSFKLFCTQTTQDQDSLCKRIEKLPKGESIASAFRSWMRDGFPVRGADVFHTINRLRKLNFNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGIPHGEKLFTRVPVEFQNELLYNNLVIACLDKGVVRVSLEYMKKMRELGHPISHLVFNRLIILHSSPSRRKMIHGLLTQMKADKVTPHVSTYNILMKIEANEHDLENLMRFFDRMKRVHVEPNEISYCILATAHAVARLYTATEMYVEAVEKSMTGNNWSTLDVLLILYGYLGSRKELERIWSIIKGLPFVRSKSYLLAIEAFGRIGELNRAEEIWSEMESVKGLKSVEQFNSMMTVYCKHGVLDKAARLYKNMKTKECKPNAITYRHLVLGCLKSGKAEQALKTLDLGMRFPVDKRVRNSTPWLETTLSIAELFAEKGDVENVERLFEEFHKAKYCRYTFVYNTLIKAYVKAKIYNPNLLRRMILGGANPDAETYSLLKIAEQFRT*