AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0458000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0458000 MtrunA17_Chr2g0328121 96.289 512 19 0 1 512 1 512 0.0 1023
Msa0458000 MtrunA17_Chr1g0171501 28.728 456 315 4 56 511 152 597 3.15e-53 189
Msa0458000 MtrunA17_Chr7g0256181 24.672 458 331 7 56 511 169 614 1.08e-44 166
Msa0458000 MtrunA17_Chr8g0368151 24.619 459 333 8 58 509 38 490 5.61e-33 131
Msa0458000 MtrunA17_Chr1g0185601 23.602 483 347 9 39 510 31 502 7.71e-31 125
Msa0458000 MtrunA17_Chr8g0359961 21.854 453 340 8 34 478 20 466 1.12e-25 110
Msa0458000 MtrunA17_Chr2g0282091 21.397 458 346 6 58 509 43 492 5.51e-25 108
Msa0458000 MtrunA17_Chr4g0039041 23.823 361 229 6 147 504 293 610 1.54e-22 101
Msa0458000 MtrunA17_Chr2g0303221 24.090 357 265 6 59 411 47 401 6.43e-22 99.0
Msa0458000 MtrunA17_Chr1g0194521 22.300 426 317 8 35 452 76 495 1.72e-21 97.8
Msa0458000 MtrunA17_Chr1g0155351 23.103 290 219 4 54 340 66 354 4.28e-21 95.5
Msa0458000 MtrunA17_Chr3g0136851 23.529 391 265 6 139 497 161 549 1.80e-20 95.5
Msa0458000 MtrunA17_Chr3g0136851 20.521 307 234 3 201 504 818 1117 2.28e-13 73.2
Msa0458000 MtrunA17_Chr3g0136851 18.971 311 237 6 107 408 371 675 4.88e-11 65.5
Msa0458000 MtrunA17_Chr1g0196741 25.424 354 247 8 147 493 288 631 6.54e-20 93.6
Msa0458000 MtrunA17_Chr4g0021331 21.639 476 343 11 26 487 10 469 2.23e-19 90.9
Msa0458000 MtrunA17_Chr6g0482601 20.972 391 272 8 148 504 49 436 3.18e-19 90.5
Msa0458000 MtrunA17_Chr3g0143411 23.754 341 235 8 174 504 138 463 3.54e-19 90.5
Msa0458000 MtrunA17_Chr6g0482821 21.299 385 265 9 154 504 147 527 4.19e-19 90.5
Msa0458000 MtrunA17_Chr6g0481621 20.408 441 302 11 105 504 114 546 6.46e-19 90.1
Msa0458000 MtrunA17_Chr6g0482611 22.129 357 261 8 154 504 149 494 9.74e-19 89.4
Msa0458000 MtrunA17_Chr6g0482561 21.884 329 220 7 210 504 38 363 4.32e-18 86.3
Msa0458000 MtrunA17_Chr6g0481971 20.779 385 267 9 154 504 137 517 6.17e-18 86.7
Msa0458000 MtrunA17_Chr4g0033981 22.872 376 272 7 143 512 251 614 6.92e-18 87.0
Msa0458000 MtrunA17_Chr8g0377751 22.581 341 221 9 108 408 660 997 1.59e-17 86.3
Msa0458000 MtrunA17_Chr3g0132571 19.956 456 357 5 54 505 48 499 2.02e-17 85.1
Msa0458000 MtrunA17_Chr2g0324251 22.877 424 290 9 54 449 44 458 4.03e-17 84.0
Msa0458000 MtrunA17_Chr6g0478261 19.826 459 293 13 82 504 103 522 5.33e-17 84.0
Msa0458000 MtrunA17_Chr1g0166071 23.399 406 247 7 143 509 271 651 6.36e-17 84.3
Msa0458000 MtrunA17_Chr6g0478001 20.050 404 276 8 143 507 139 534 1.00e-16 83.2
Msa0458000 MtrunA17_Chr2g0297991 22.274 431 301 10 92 504 180 594 1.06e-16 83.6
Msa0458000 MtrunA17_Chr7g0257371 24.566 346 228 10 149 479 294 621 5.12e-16 81.3
Msa0458000 MtrunA17_Chr7g0257371 22.289 332 229 8 97 411 136 455 2.19e-11 66.6
Msa0458000 MtrunA17_Chr8g0390501 23.310 429 290 10 102 511 69 477 7.45e-16 80.5
Msa0458000 MtrunA17_Chr6g0477341 20.091 438 307 13 105 504 151 583 1.27e-15 79.7
Msa0458000 MtrunA17_Chr5g0407151 23.607 305 224 3 152 455 287 583 1.82e-15 79.3
Msa0458000 MtrunA17_Chr5g0407151 21.942 278 192 6 147 411 316 581 1.91e-12 69.7
Msa0458000 MtrunA17_Chr3g0093791 23.794 311 190 7 198 504 359 626 1.88e-15 79.7
Msa0458000 MtrunA17_Chr3g0093791 20.181 332 261 3 77 405 306 636 5.16e-12 68.6
Msa0458000 MtrunA17_Chr4g0059671 20.930 473 350 9 40 502 70 528 3.01e-15 79.0
Msa0458000 MtrunA17_Chr4g0059671 22.781 338 221 7 114 412 282 618 5.41e-13 71.6
Msa0458000 MtrunA17_Chr8g0382891 23.003 313 210 6 181 478 119 415 4.22e-15 77.8
Msa0458000 MtrunA17_Chr8g0382891 23.040 421 298 11 15 418 24 435 1.16e-13 73.2
Msa0458000 MtrunA17_Chr1g0168811 24.620 329 201 9 180 504 253 538 8.38e-15 77.0
Msa0458000 MtrunA17_Chr1g0168811 25.357 280 189 7 234 504 200 468 6.13e-12 68.2
Msa0458000 MtrunA17_Chr8g0359551 24.843 318 214 10 205 512 203 505 1.13e-14 77.0
Msa0458000 MtrunA17_Chr8g0392911 22.642 424 308 11 82 497 167 578 1.39e-14 76.6
Msa0458000 MtrunA17_Chr3g0102961 19.908 437 275 11 82 483 111 507 1.50e-14 76.3
Msa0458000 MtrunA17_Chr6g0481991 20.672 387 265 11 154 504 174 554 1.67e-14 76.3
Msa0458000 MtrunA17_Chr1g0159521 20.103 388 272 9 154 507 146 529 1.71e-14 76.3
Msa0458000 MtrunA17_Chr8g0391651 22.011 368 271 7 143 504 311 668 2.08e-14 76.3
Msa0458000 MtrunA17_Chr7g0265721 24.932 365 255 9 147 504 360 712 2.69e-14 75.9
Msa0458000 MtrunA17_Chr8g0335951 24.336 226 161 3 240 461 191 410 3.30e-14 74.7
Msa0458000 MtrunA17_Chr7g0220481 19.274 358 268 4 114 460 245 592 5.33e-14 75.1
Msa0458000 MtrunA17_Chr1g0182521 21.988 332 238 8 93 411 252 575 7.01e-14 74.3
Msa0458000 MtrunA17_Chr5g0446031 22.741 343 242 11 164 497 223 551 7.87e-14 74.3
Msa0458000 MtrunA17_Chr5g0446031 22.222 324 235 8 163 479 148 461 6.21e-11 65.1
Msa0458000 MtrunA17_Chr1g0162741 22.515 342 243 8 167 498 230 559 9.89e-14 73.9
Msa0458000 MtrunA17_Chr1g0210801 29.474 190 119 4 320 504 174 353 1.02e-13 73.6
Msa0458000 MtrunA17_Chr1g0210801 24.033 362 260 8 52 406 187 540 2.10e-13 72.8
Msa0458000 MtrunA17_Chr1g0210801 19.955 441 331 7 77 507 103 531 1.16e-11 67.0
Msa0458000 MtrunA17_Chr3g0099661 21.893 338 250 7 147 480 315 642 1.03e-13 73.9
Msa0458000 MtrunA17_Chr3g0099661 20.972 391 241 7 150 507 211 566 1.13e-12 70.9
Msa0458000 MtrunA17_Chr3g0099661 18.878 392 250 7 145 504 383 738 3.52e-12 69.3
Msa0458000 MtrunA17_Chr6g0481601 20.207 386 280 10 105 478 114 483 1.10e-13 73.2
Msa0458000 MtrunA17_Chr5g0434021 20.772 337 246 6 147 477 296 617 1.12e-13 73.9
Msa0458000 MtrunA17_Chr1g0148741 26.066 211 140 5 296 504 239 435 1.31e-13 73.6
Msa0458000 MtrunA17_Chr6g0478691 23.907 343 235 9 145 477 209 535 1.33e-13 73.6
Msa0458000 MtrunA17_Chr6g0478691 22.561 328 223 7 181 504 54 354 1.37e-12 70.1
Msa0458000 MtrunA17_Chr6g0481981 19.430 386 249 11 181 507 49 431 1.41e-13 72.8
Msa0458000 MtrunA17_Chr6g0478551 20.520 346 251 7 143 479 196 526 2.14e-13 72.4
Msa0458000 MtrunA17_Chr5g0419551 20.784 255 200 2 143 395 353 607 2.40e-13 72.8
Msa0458000 MtrunA17_Chr5g0419551 23.438 384 266 11 133 502 235 604 5.11e-11 65.5
Msa0458000 MtrunA17_Chr2g0282801 24.260 338 229 9 178 503 49 371 3.06e-13 72.0
Msa0458000 MtrunA17_Chr3g0116201 23.585 212 153 3 201 407 169 376 3.11e-13 72.0
Msa0458000 MtrunA17_Chr5g0412071 22.775 382 221 11 158 504 344 686 4.20e-13 72.0
Msa0458000 MtrunA17_Chr1g0190191 22.770 426 300 13 92 504 105 514 4.51e-13 71.6
Msa0458000 MtrunA17_Chr6g0471201 28.571 224 151 4 193 411 290 509 4.55e-13 71.6
Msa0458000 MtrunA17_Chr6g0473441 19.114 429 308 9 109 501 90 515 6.24e-13 71.2
Msa0458000 MtrunA17_Chr3g0089851 23.792 269 190 7 212 475 201 459 6.66e-13 70.9
Msa0458000 MtrunA17_Chr4g0047591 22.024 336 228 7 199 502 342 675 7.66e-13 71.2
Msa0458000 MtrunA17_Chr6g0473351 20.327 428 301 10 109 501 90 512 8.28e-13 70.9
Msa0458000 MtrunA17_Chr1g0168761 21.271 362 258 11 154 504 130 475 9.03e-13 70.5
Msa0458000 MtrunA17_Chr7g0257471 22.418 397 286 9 120 503 316 703 9.21e-13 70.9
Msa0458000 MtrunA17_Chr5g0417961 21.357 398 265 5 143 509 270 650 9.38e-13 70.9
Msa0458000 MtrunA17_Chr4g0048611 21.789 436 276 13 117 504 254 672 1.17e-12 70.9
Msa0458000 MtrunA17_Chr6g0482571 20.356 393 257 11 147 504 10 381 1.19e-12 69.7
Msa0458000 MtrunA17_Chr7g0220501 20.604 364 260 8 109 460 281 627 1.54e-12 70.5
Msa0458000 MtrunA17_Chr6g0471871 21.984 373 265 10 143 504 172 529 1.61e-12 69.7
Msa0458000 MtrunA17_Chr6g0473331 19.481 385 272 9 154 504 176 556 1.71e-12 69.7
Msa0458000 MtrunA17_Chr7g0231941 26.941 219 144 7 294 504 165 375 1.71e-12 70.1
Msa0458000 MtrunA17_Chr7g0231941 19.677 371 280 7 146 504 157 521 8.44e-11 64.7
Msa0458000 MtrunA17_Chr6g0477511 22.500 280 198 8 143 412 213 483 1.72e-12 69.7
Msa0458000 MtrunA17_Chr7g0256621 27.461 193 123 5 323 509 225 406 1.76e-12 69.7
Msa0458000 MtrunA17_Chr8g0390041 21.329 286 222 3 108 390 176 461 1.86e-12 69.7
Msa0458000 MtrunA17_Chr4g0019851 19.795 293 189 4 216 507 200 447 3.13e-12 68.9
Msa0458000 MtrunA17_Chr2g0285331 20.640 344 247 6 85 413 171 503 3.80e-12 68.9
Msa0458000 MtrunA17_Chr3g0143851 19.712 416 311 9 92 496 191 594 4.14e-12 68.9
Msa0458000 MtrunA17_Chr3g0143851 17.703 418 289 8 102 510 307 678 5.65e-11 65.1
Msa0458000 MtrunA17_Chr7g0218641 19.845 388 276 6 147 501 132 517 4.23e-12 68.6
Msa0458000 MtrunA17_Chr6g0481751 22.903 310 207 9 212 507 155 446 4.52e-12 68.2
Msa0458000 MtrunA17_Chr6g0482651 25.279 269 190 5 145 407 195 458 5.76e-12 68.2
Msa0458000 MtrunA17_Chr7g0236501 21.514 251 195 2 147 395 224 474 5.81e-12 68.2
Msa0458000 MtrunA17_Chr5g0396041 22.321 336 235 8 181 504 266 587 6.47e-12 68.6
Msa0458000 MtrunA17_Chr8g0347201 19.802 404 265 7 57 454 376 726 6.66e-12 68.2
Msa0458000 MtrunA17_Chr1g0147171 21.739 345 247 8 143 478 143 473 8.22e-12 67.8
Msa0458000 MtrunA17_Chr3g0091741 24.775 222 146 5 201 408 145 359 8.64e-12 67.4
Msa0458000 MtrunA17_Chr6g0483431 23.005 213 153 3 201 407 158 365 9.14e-12 67.0
Msa0458000 MtrunA17_Chr8g0368891 22.101 457 302 12 65 504 143 562 9.72e-12 67.4
Msa0458000 MtrunA17_Chr8g0369641 22.761 268 198 4 147 409 529 792 1.08e-11 67.4
Msa0458000 MtrunA17_Chr8g0369641 26.518 313 211 10 200 504 266 567 4.94e-11 65.5
Msa0458000 MtrunA17_Chr8g0369641 20.235 341 257 5 143 478 279 609 5.97e-11 65.1
Msa0458000 MtrunA17_Chr2g0296901 20.726 468 325 12 63 497 107 561 1.14e-11 67.4
Msa0458000 MtrunA17_Chr3g0121341 21.683 309 224 9 201 504 288 583 1.50e-11 67.0
Msa0458000 MtrunA17_Chr6g0473491 18.415 429 311 9 109 501 90 515 1.52e-11 66.6
Msa0458000 MtrunA17_Chr1g0162281 22.396 384 244 9 143 477 263 641 1.63e-11 67.0
Msa0458000 MtrunA17_Chr6g0458411 20.779 308 239 4 109 412 197 503 1.64e-11 66.6
Msa0458000 MtrunA17_Chr1g0170071 24.113 282 187 7 145 412 549 817 1.64e-11 67.0
Msa0458000 MtrunA17_Chr1g0200211 20.438 274 167 4 210 478 207 434 1.76e-11 67.0
Msa0458000 MtrunA17_Chr2g0284331 24.312 218 152 4 201 413 204 413 1.98e-11 66.2
Msa0458000 MtrunA17_Chr6g0482541 20.000 310 232 7 201 504 29 328 2.16e-11 65.9
Msa0458000 MtrunA17_Chr2g0331911 20.976 410 292 9 82 477 238 629 2.27e-11 66.2
Msa0458000 MtrunA17_Chr7g0241871 25.368 272 177 7 213 474 128 383 2.30e-11 66.6
Msa0458000 MtrunA17_Chr7g0241871 24.064 187 133 2 320 504 131 310 3.67e-11 65.9
Msa0458000 MtrunA17_Chr2g0304071 21.925 374 275 7 136 504 187 548 2.60e-11 66.2
Msa0458000 MtrunA17_Chr7g0260101 22.078 308 212 10 204 501 33 322 2.84e-11 65.1
Msa0458000 MtrunA17_Chr5g0394721 23.431 239 171 4 163 395 222 454 2.84e-11 65.9
Msa0458000 MtrunA17_Chr5g0394721 23.226 310 212 8 207 504 158 453 3.66e-11 65.5
Msa0458000 MtrunA17_Chr6g0482971 20.443 406 245 13 143 511 157 521 2.89e-11 65.9
Msa0458000 MtrunA17_Chr6g0482971 22.419 339 246 8 81 407 125 458 5.52e-11 65.1
Msa0458000 MtrunA17_Chr6g0477361 21.384 318 192 7 201 504 21 294 3.20e-11 64.7
Msa0458000 MtrunA17_Chr6g0472611 18.162 457 321 10 81 501 82 521 3.46e-11 65.5
Msa0458000 MtrunA17_Chr6g0473181 28.571 182 121 2 325 504 24 198 4.77e-11 63.5
Msa0458000 MtrunA17_Chr6g0482791 20.261 459 306 15 61 473 40 484 6.02e-11 64.7
Msa0458000 MtrunA17_Chr1g0171281 21.357 398 269 13 145 504 128 519 6.17e-11 64.7
Msa0458000 MtrunA17_Chr3g0133151 24.638 207 147 6 212 412 197 400 7.08e-11 64.7
Msa0458000 MtrunA17_Chr3g0118171 22.059 272 194 7 214 479 170 429 8.24e-11 64.3
Msa0458000 MtrunA17_Chr4g0038401 24.779 226 164 5 167 389 661 883 8.28e-11 64.7
Msa0458000 MtrunA17_Chr6g0482751 20.430 465 282 15 84 507 109 526 9.28e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0458000 AT1G07590.1 61.163 533 183 3 3 511 1 533 0.0 681
Msa0458000 AT1G80270.1 27.689 437 306 4 43 479 129 555 4.23e-53 189
Msa0458000 AT1G80270.3 27.689 437 306 4 43 479 129 555 4.23e-53 189
Msa0458000 AT1G80270.2 27.689 437 306 4 43 479 129 555 4.23e-53 189
Msa0458000 AT1G80270.5 27.689 437 306 4 43 479 129 555 4.23e-53 189
Msa0458000 AT1G80270.4 27.689 437 306 4 43 479 129 555 4.23e-53 189
Msa0458000 AT1G15480.1 25.877 456 329 4 56 511 139 585 1.51e-46 171
Msa0458000 AT4G02820.1 23.261 460 335 6 58 511 76 523 7.08e-33 132
Msa0458000 AT1G60770.1 25.776 419 299 7 77 489 57 469 2.04e-32 130
Msa0458000 AT1G02150.1 24.641 418 302 6 44 454 67 478 3.87e-31 127
Msa0458000 AT3G15590.1 24.434 442 323 6 57 497 155 586 8.48e-31 126
Msa0458000 AT3G15590.2 24.434 442 323 6 57 497 155 586 8.48e-31 126
Msa0458000 AT2G20710.1 25.668 374 265 5 44 409 38 406 5.39e-30 123
Msa0458000 AT4G01990.1 23.904 456 329 10 56 504 53 497 2.66e-27 115
Msa0458000 AT1G02370.1 23.362 458 330 10 43 489 70 517 2.64e-26 112
Msa0458000 AT1G09900.1 22.717 427 306 9 87 504 149 560 8.00e-25 108
Msa0458000 AT2G20710.2 25.962 312 219 4 105 409 5 311 7.57e-23 100
Msa0458000 AT5G09450.1 24.224 322 230 9 38 348 49 367 1.07e-21 97.8
Msa0458000 AT5G27460.1 21.729 428 326 6 37 458 32 456 8.32e-21 95.9
Msa0458000 AT4G21705.1 20.479 459 352 7 54 504 33 486 3.50e-20 94.0
Msa0458000 AT1G62680.1 22.026 454 326 13 64 504 38 476 6.63e-19 90.1
Msa0458000 AT1G62680.2 22.026 454 326 13 64 504 38 476 6.63e-19 90.1
Msa0458000 AT5G02860.1 21.644 365 270 7 150 507 178 533 1.14e-18 90.1
Msa0458000 AT5G02860.1 21.488 363 270 8 58 411 191 547 5.26e-17 84.7
Msa0458000 AT5G02860.4 21.644 365 270 7 150 507 178 533 1.14e-18 90.1
Msa0458000 AT5G02860.4 21.488 363 270 8 58 411 191 547 5.26e-17 84.7
Msa0458000 AT5G02860.2 21.644 365 270 7 150 507 178 533 1.14e-18 90.1
Msa0458000 AT5G02860.2 21.488 363 270 8 58 411 191 547 5.26e-17 84.7
Msa0458000 AT5G02860.5 21.644 365 270 7 150 507 178 533 1.14e-18 90.1
Msa0458000 AT5G02860.5 21.488 363 270 8 58 411 191 547 5.26e-17 84.7
Msa0458000 AT5G02860.3 21.644 365 270 7 150 507 178 533 1.14e-18 90.1
Msa0458000 AT5G02860.3 21.488 363 270 8 58 411 191 547 5.26e-17 84.7
Msa0458000 AT1G28020.1 24.642 349 243 9 51 387 44 384 5.96e-18 87.0
Msa0458000 AT4G39620.2 22.515 342 257 4 73 406 95 436 1.05e-17 86.3
Msa0458000 AT4G11690.1 23.567 314 235 4 102 411 189 501 1.17e-17 86.7
Msa0458000 AT4G39620.1 22.360 322 242 4 93 406 115 436 1.46e-17 86.3
Msa0458000 AT1G05670.1 23.496 349 241 9 167 504 234 567 9.58e-17 84.0
Msa0458000 AT1G05670.2 23.496 349 241 9 167 504 234 567 9.58e-17 84.0
Msa0458000 AT1G05670.3 23.496 349 241 9 167 504 234 567 9.58e-17 84.0
Msa0458000 AT4G11690.2 24.354 271 202 3 143 411 205 474 1.11e-16 83.2
Msa0458000 AT3G60050.2 27.941 272 183 7 147 411 187 452 2.59e-16 82.0
Msa0458000 AT3G60050.1 27.941 272 183 7 147 411 187 452 2.59e-16 82.0
Msa0458000 AT5G42310.1 22.010 418 271 11 102 510 330 701 4.64e-16 81.6
Msa0458000 AT5G42310.1 19.212 406 306 7 102 496 223 617 1.83e-11 67.0
Msa0458000 AT4G28010.1 25.076 327 223 8 102 415 273 590 4.65e-16 81.6
Msa0458000 AT2G16880.1 26.146 371 240 12 147 502 313 664 5.62e-16 81.6
Msa0458000 AT2G16880.1 22.881 354 253 6 133 477 226 568 1.44e-13 73.9
Msa0458000 AT1G55630.1 29.740 269 174 8 147 407 190 451 7.35e-16 80.5
Msa0458000 AT1G62670.2 23.014 365 267 6 145 504 257 612 1.34e-15 80.1
Msa0458000 AT1G62670.2 22.222 378 253 9 163 504 170 542 7.97e-14 74.7
Msa0458000 AT1G62670.2 22.156 334 240 9 152 479 91 410 1.03e-11 67.8
Msa0458000 AT1G62670.1 23.014 365 267 6 145 504 257 612 1.34e-15 80.1
Msa0458000 AT1G62670.1 22.222 378 253 9 163 504 170 542 7.97e-14 74.7
Msa0458000 AT1G62670.1 22.156 334 240 9 152 479 91 410 1.03e-11 67.8
Msa0458000 AT5G39980.1 21.351 370 281 5 42 407 91 454 1.34e-15 80.1
Msa0458000 AT2G18940.1 22.343 367 263 9 147 504 319 672 1.87e-15 80.1
Msa0458000 AT2G18940.1 19.274 441 332 9 77 504 138 567 5.65e-15 78.6
Msa0458000 AT2G18940.1 20.580 379 250 9 143 481 385 752 3.88e-12 69.3
Msa0458000 AT3G48810.1 19.718 497 306 11 79 504 60 534 2.17e-15 79.7
Msa0458000 AT5G61990.1 25.000 276 196 7 143 412 451 721 2.82e-15 79.7
Msa0458000 AT5G61990.1 21.563 371 277 4 109 474 380 741 7.51e-15 78.2
Msa0458000 AT1G31840.1 21.446 401 303 6 102 497 417 810 3.89e-15 79.0
Msa0458000 AT5G16640.1 22.442 303 220 5 117 407 151 450 3.94e-15 78.2
Msa0458000 AT5G16640.1 23.016 252 189 4 163 411 170 419 3.70e-11 65.9
Msa0458000 AT3G23020.1 22.581 372 232 8 147 477 301 657 4.56e-15 79.0
Msa0458000 AT3G04760.1 25.378 331 225 10 94 412 212 532 5.69e-15 78.2
Msa0458000 AT3G04760.2 21.986 423 307 9 94 504 108 519 6.27e-15 77.8
Msa0458000 AT5G64320.1 21.535 404 304 6 105 504 316 710 6.76e-15 78.2
Msa0458000 AT5G12100.1 22.888 367 265 6 145 504 285 640 7.06e-15 78.2
Msa0458000 AT2G35130.1 24.542 273 199 3 143 411 298 567 8.37e-15 77.4
Msa0458000 AT2G35130.1 19.492 472 287 12 82 504 123 550 5.15e-13 72.0
Msa0458000 AT2G35130.2 23.704 270 205 1 143 411 320 589 8.52e-15 77.8
Msa0458000 AT2G35130.2 19.492 472 287 12 82 504 145 572 5.09e-13 72.0
Msa0458000 AT2G35130.3 24.542 273 199 3 143 411 295 564 8.55e-15 77.4
Msa0458000 AT2G35130.3 19.616 469 287 12 82 504 123 547 2.33e-13 73.2
Msa0458000 AT3G16710.2 23.867 331 210 10 83 409 57 349 9.00e-15 77.0
Msa0458000 AT3G18110.1 22.482 427 268 10 92 504 172 549 9.03e-15 78.2
Msa0458000 AT3G16710.1 23.565 331 211 9 83 409 57 349 9.30e-15 77.0
Msa0458000 AT1G12700.3 20.937 363 273 7 147 504 247 600 1.23e-14 77.0
Msa0458000 AT1G12700.2 20.937 363 273 7 147 504 247 600 1.23e-14 77.0
Msa0458000 AT1G12700.1 20.937 363 273 7 147 504 231 584 1.30e-14 77.0
Msa0458000 AT5G41170.2 23.416 363 237 10 52 409 12 338 1.89e-14 76.3
Msa0458000 AT5G41170.1 23.416 363 237 10 52 409 12 338 2.39e-14 75.9
Msa0458000 AT1G63130.1 22.768 448 289 13 66 504 38 437 3.20e-14 75.9
Msa0458000 AT1G63130.1 20.561 428 289 9 104 489 179 597 1.04e-13 74.3
Msa0458000 AT1G63130.2 22.768 448 289 13 66 504 38 437 3.20e-14 75.9
Msa0458000 AT1G63130.2 20.561 428 289 9 104 489 179 597 1.04e-13 74.3
Msa0458000 AT5G59900.1 22.069 290 220 3 143 427 611 899 3.59e-14 75.9
Msa0458000 AT4G31850.1 21.875 320 230 6 165 477 349 655 4.56e-14 75.9
Msa0458000 AT4G31850.1 23.123 333 226 7 192 504 786 1108 8.46e-13 71.6
Msa0458000 AT3G16010.1 21.535 404 291 9 82 474 240 628 4.74e-14 75.5
Msa0458000 AT5G18475.1 25.837 209 146 7 210 412 192 397 4.94e-14 75.1
Msa0458000 AT1G63080.2 22.884 319 212 7 201 504 297 596 6.16e-14 74.7
Msa0458000 AT1G63080.1 22.884 319 212 7 201 504 297 596 6.16e-14 74.7
Msa0458000 AT1G63080.3 22.884 319 212 7 201 504 297 596 6.16e-14 74.7
Msa0458000 AT1G12620.1 21.911 429 313 12 84 504 119 533 6.55e-14 74.7
Msa0458000 AT5G21222.1 20.991 343 239 8 158 478 317 649 6.67e-14 75.1
Msa0458000 AT5G21222.1 21.652 351 225 7 104 409 347 692 9.60e-13 71.2
Msa0458000 AT5G21222.1 22.715 361 259 8 93 444 407 756 4.44e-12 69.3
Msa0458000 AT5G21222.2 20.991 343 239 8 158 478 317 649 6.67e-14 75.1
Msa0458000 AT5G21222.2 21.652 351 225 7 104 409 347 692 9.60e-13 71.2
Msa0458000 AT5G21222.2 22.715 361 259 8 93 444 407 756 4.44e-12 69.3
Msa0458000 AT5G21222.4 20.991 343 239 8 158 478 317 649 6.67e-14 75.1
Msa0458000 AT5G21222.4 21.652 351 225 7 104 409 347 692 9.60e-13 71.2
Msa0458000 AT5G21222.4 22.715 361 259 8 93 444 407 756 4.44e-12 69.3
Msa0458000 AT5G21222.3 20.991 343 239 8 158 478 317 649 6.67e-14 75.1
Msa0458000 AT5G21222.3 21.652 351 225 7 104 409 347 692 9.60e-13 71.2
Msa0458000 AT5G21222.3 22.715 361 259 8 93 444 407 756 4.44e-12 69.3
Msa0458000 AT5G39710.1 22.047 508 363 18 21 512 81 571 8.24e-14 74.7
Msa0458000 AT5G25630.3 20.882 431 299 11 102 511 20 429 8.89e-14 74.3
Msa0458000 AT5G25630.1 20.882 431 299 11 102 511 71 480 1.01e-13 74.3
Msa0458000 AT3G22470.1 22.754 334 246 8 81 407 216 544 1.34e-13 73.9
Msa0458000 AT3G22470.1 19.944 356 270 7 154 504 186 531 2.34e-11 66.6
Msa0458000 AT2G32630.1 23.315 356 247 13 160 504 205 545 1.53e-13 73.6
Msa0458000 AT2G32630.1 21.019 314 238 5 167 478 282 587 1.86e-11 67.0
Msa0458000 AT1G63150.2 21.719 442 315 11 77 504 187 611 1.55e-13 73.6
Msa0458000 AT1G63150.1 21.719 442 315 11 77 504 187 611 1.55e-13 73.6
Msa0458000 AT3G06920.2 22.304 408 248 10 164 504 202 607 1.66e-13 73.9
Msa0458000 AT3G06920.3 22.304 408 248 10 164 504 202 607 1.66e-13 73.9
Msa0458000 AT2G41720.1 24.427 262 191 4 147 403 216 475 1.81e-13 73.6
Msa0458000 AT4G26800.2 23.684 304 212 7 209 504 118 409 1.94e-13 73.2
Msa0458000 AT4G26800.3 23.684 304 212 7 209 504 43 334 2.10e-13 72.8
Msa0458000 AT3G06920.1 22.304 408 248 10 164 504 188 593 2.12e-13 73.6
Msa0458000 AT2G41720.3 24.427 262 191 4 147 403 216 475 2.13e-13 73.6
Msa0458000 AT1G62910.1 21.629 356 247 10 163 504 172 509 2.33e-13 73.2
Msa0458000 AT1G62910.1 21.219 443 319 11 77 504 187 614 2.99e-12 69.7
Msa0458000 AT1G73710.1 22.157 343 243 8 147 480 308 635 2.45e-13 73.6
Msa0458000 AT1G73710.1 22.500 280 184 8 147 409 378 641 2.10e-11 67.4
Msa0458000 AT1G74850.1 20.256 390 265 7 143 493 140 522 2.45e-13 73.2
Msa0458000 AT1G74850.1 19.634 382 262 4 147 490 250 624 4.59e-12 69.3
Msa0458000 AT1G02060.1 22.535 284 198 8 234 504 85 359 2.83e-13 72.8
Msa0458000 AT2G41720.2 24.427 262 191 4 147 403 84 343 2.83e-13 72.8
Msa0458000 AT2G01740.1 22.436 468 302 15 82 504 28 479 3.13e-13 72.4
Msa0458000 AT1G18900.4 19.355 341 266 4 77 414 330 664 3.43e-13 72.8
Msa0458000 AT1G18900.2 19.355 341 266 4 77 414 330 664 3.43e-13 72.8
Msa0458000 AT1G18900.1 19.355 341 266 4 77 414 330 664 3.43e-13 72.8
Msa0458000 AT1G03560.1 24.561 342 230 12 147 477 155 479 3.50e-13 72.4
Msa0458000 AT1G63330.3 21.958 337 231 9 182 504 13 331 3.51e-13 72.4
Msa0458000 AT1G63330.3 20.299 335 201 7 201 504 172 471 4.75e-11 65.5
Msa0458000 AT1G63330.1 21.958 337 231 9 182 504 13 331 3.51e-13 72.4
Msa0458000 AT1G63330.1 20.299 335 201 7 201 504 172 471 4.75e-11 65.5
Msa0458000 AT1G63330.2 21.958 337 231 9 182 504 13 331 3.51e-13 72.4
Msa0458000 AT1G63330.2 20.299 335 201 7 201 504 172 471 4.75e-11 65.5
Msa0458000 AT1G62930.1 20.920 435 287 10 118 504 186 611 3.79e-13 72.4
Msa0458000 AT1G62930.1 19.290 451 281 10 94 504 64 471 3.85e-11 66.2
Msa0458000 AT1G18900.3 19.355 341 266 4 77 414 330 664 4.33e-13 72.4
Msa0458000 AT4G19440.4 23.899 318 220 8 112 412 510 822 4.98e-13 72.4
Msa0458000 AT4G19440.2 23.899 318 220 8 112 412 510 822 4.98e-13 72.4
Msa0458000 AT4G19440.3 23.899 318 220 8 112 412 510 822 4.98e-13 72.4
Msa0458000 AT4G19440.1 23.899 318 220 8 112 412 510 822 4.98e-13 72.4
Msa0458000 AT1G51965.1 22.764 369 225 10 180 504 134 486 5.43e-13 72.0
Msa0458000 AT1G51965.1 21.429 308 229 4 200 504 294 591 2.60e-12 69.7
Msa0458000 AT5G24830.1 24.521 261 192 2 150 407 271 529 1.07e-12 70.9
Msa0458000 AT3G53700.1 23.151 311 195 7 141 411 292 598 1.11e-12 71.2
Msa0458000 AT5G01110.1 21.016 433 286 10 82 504 312 698 1.11e-12 71.2
Msa0458000 AT5G65560.1 20.433 416 307 7 101 504 275 678 1.19e-12 71.2
Msa0458000 AT5G65560.2 20.433 416 307 7 101 504 275 678 1.19e-12 71.2
Msa0458000 AT5G65560.3 20.433 416 307 7 101 504 275 678 1.19e-12 71.2
Msa0458000 AT5G50280.1 22.973 296 183 4 146 400 346 637 1.28e-12 70.9
Msa0458000 AT5G01110.2 21.016 433 286 10 82 504 340 726 1.35e-12 70.9
Msa0458000 AT1G62590.2 21.802 344 236 10 176 504 81 406 1.40e-12 70.5
Msa0458000 AT1G62590.2 20.299 335 201 7 201 504 247 546 2.10e-12 70.1
Msa0458000 AT1G62590.1 21.802 344 236 10 176 504 81 406 1.40e-12 70.5
Msa0458000 AT1G62590.1 20.299 335 201 7 201 504 247 546 2.10e-12 70.1
Msa0458000 AT2G02150.1 23.920 301 211 6 211 504 189 478 1.48e-12 70.9
Msa0458000 AT2G02150.2 23.920 301 211 6 211 504 189 478 1.48e-12 70.9
Msa0458000 AT1G64583.1 21.303 399 283 9 114 504 87 462 1.77e-12 70.1
Msa0458000 AT1G64583.2 21.303 399 283 9 114 504 62 437 2.25e-12 69.7
Msa0458000 AT1G63070.1 23.397 312 219 8 176 479 71 370 2.84e-12 69.7
Msa0458000 AT1G63070.1 20.339 413 304 8 104 504 173 572 9.62e-11 64.7
Msa0458000 AT1G63400.1 20.619 485 304 13 94 504 69 546 2.91e-12 69.7
Msa0458000 AT1G63400.1 20.732 410 297 7 104 500 183 577 4.55e-12 68.9
Msa0458000 AT1G12300.1 20.561 428 320 8 84 504 135 549 3.17e-12 69.7
Msa0458000 AT3G22470.2 21.978 364 231 8 164 504 58 391 3.23e-12 69.3
Msa0458000 AT2G39230.1 22.028 286 186 9 236 504 471 736 5.29e-12 68.9
Msa0458000 AT3G09060.2 23.913 230 168 4 182 407 152 378 7.25e-12 68.6
Msa0458000 AT3G09060.2 20.717 251 194 4 163 409 97 346 1.39e-11 67.4
Msa0458000 AT3G09060.1 23.913 230 168 4 182 407 152 378 7.25e-12 68.6
Msa0458000 AT3G09060.1 20.717 251 194 4 163 409 97 346 1.39e-11 67.4
Msa0458000 AT1G13800.1 18.769 325 241 3 107 409 529 852 8.09e-12 68.6
Msa0458000 AT1G13800.2 18.769 325 241 3 107 409 529 852 8.09e-12 68.6
Msa0458000 AT4G26800.1 27.807 187 126 2 320 504 85 264 8.60e-12 67.4
Msa0458000 AT2G06000.1 22.848 302 202 9 216 504 105 388 1.11e-11 67.8
Msa0458000 AT2G06000.2 22.848 302 202 9 216 504 105 388 1.11e-11 67.8
Msa0458000 AT1G74900.1 21.429 294 220 4 214 504 91 376 1.28e-11 67.0
Msa0458000 AT2G31400.2 22.050 322 223 7 112 407 375 694 1.47e-11 67.8
Msa0458000 AT2G31400.2 20.760 342 219 7 143 478 302 597 4.90e-11 65.9
Msa0458000 AT5G16420.1 21.130 407 291 9 103 504 95 476 1.78e-11 67.0
Msa0458000 AT5G16420.3 21.130 407 291 9 103 504 95 476 1.78e-11 67.0
Msa0458000 AT5G16420.4 21.130 407 291 9 103 504 95 476 1.78e-11 67.0
Msa0458000 AT5G16420.2 21.130 407 291 9 103 504 95 476 1.78e-11 67.0
Msa0458000 AT1G06580.3 21.222 311 214 8 117 407 43 342 1.90e-11 66.2
Msa0458000 AT1G06580.2 21.222 311 214 8 117 407 43 342 1.90e-11 66.2
Msa0458000 AT2G31400.1 22.050 322 223 7 112 407 375 694 2.04e-11 67.4
Msa0458000 AT2G31400.1 21.802 344 213 8 143 478 302 597 5.12e-11 65.9
Msa0458000 AT1G06580.1 21.222 311 214 8 117 407 149 448 2.47e-11 66.2
Msa0458000 AT5G55740.1 20.468 342 227 6 115 456 414 710 2.70e-11 66.6
Msa0458000 AT1G74750.2 22.650 234 178 3 180 411 395 627 3.34e-11 66.6
Msa0458000 AT1G74750.2 18.976 332 263 5 77 404 325 654 6.08e-11 65.5
Msa0458000 AT1G74750.1 22.650 234 178 3 180 411 395 627 3.34e-11 66.6
Msa0458000 AT1G74750.1 18.976 332 263 5 77 404 325 654 6.08e-11 65.5
Msa0458000 AT1G74750.4 22.650 234 178 3 180 411 395 627 3.34e-11 66.6
Msa0458000 AT1G74750.4 18.976 332 263 5 77 404 325 654 6.08e-11 65.5
Msa0458000 AT1G74750.3 22.650 234 178 3 180 411 395 627 3.34e-11 66.6
Msa0458000 AT1G74750.3 18.976 332 263 5 77 404 325 654 6.08e-11 65.5
Msa0458000 AT1G80550.1 24.000 200 136 3 309 504 180 367 3.36e-11 65.9
Msa0458000 AT3G61520.1 23.018 391 272 11 82 456 336 713 3.92e-11 66.2
Msa0458000 AT5G38730.1 24.377 361 246 9 145 494 173 517 4.12e-11 65.9
Msa0458000 AT4G30825.1 20.134 298 229 3 183 478 316 606 4.55e-11 66.2
Msa0458000 AT5G55840.2 20.994 362 274 7 147 504 236 589 5.63e-11 65.9
Msa0458000 AT5G55840.1 20.994 362 274 7 147 504 236 589 5.63e-11 65.9
Msa0458000 AT3G54980.1 22.159 352 260 8 158 504 388 730 5.71e-11 65.9
Msa0458000 AT3G54980.2 22.159 352 260 8 158 504 388 730 5.71e-11 65.9
Msa0458000 AT5G55840.3 20.994 362 274 7 147 504 196 549 6.19e-11 65.9
Msa0458000 AT5G48730.1 23.053 321 223 11 165 475 171 477 6.66e-11 65.1
Msa0458000 AT5G41170.3 22.857 245 155 4 165 409 28 238 7.32e-11 64.7

Find 100 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGTGATGGAATGGGTAATA+AGG 0.226378 3_3:+53163264 Msa0458000:intron
TGTATATAATACCTTGATTA+AGG 0.231990 3_3:+53164375 Msa0458000:CDS
ATCATCCTTCTCAAAAGATT+TGG 0.245572 3_3:-53164424 None:intergenic
CTTATATTGTATGGGTATCT+TGG 0.271184 3_3:+53163848 Msa0458000:CDS
AGGATTTGGAGTATTATTAA+AGG 0.278975 3_3:+53163890 Msa0458000:CDS
GAAGCTATAGATTCTCCTTT+TGG 0.284878 3_3:-53162240 None:intergenic
TTAAAGACCAAATGCGAAAT+AGG 0.325228 3_3:-53163503 None:intergenic
AACGTATCGACATCTTGTTC+TGG 0.327459 3_3:+53164144 Msa0458000:CDS
AATCTATGACAGGGAATAAT+TGG 0.328265 3_3:+53163807 Msa0458000:CDS
CATGAAGAAAATGAGGGAAT+TGG 0.331480 3_3:+53163475 Msa0458000:CDS
TTCATAAAGCTAAGTATTGT+AGG 0.336671 3_3:+53164344 Msa0458000:CDS
TGAAAATTGCTGAACAGTTT+CGG 0.337323 3_3:+53164488 Msa0458000:CDS
TTATATTGTATGGGTATCTT+GGG 0.353662 3_3:+53163849 Msa0458000:CDS
GTTCTGGGTTGCTTGAAATC+TGG 0.361131 3_3:+53164160 Msa0458000:CDS
GGAAGGAGCTGGAAAGGATT+TGG 0.361161 3_3:+53163876 Msa0458000:CDS
TTCTCTTACACAAGCTATCT+TGG 0.362452 3_3:-53162206 None:intergenic
GTGATTGCTTGTTTAGATAA+AGG 0.365191 3_3:+53163428 Msa0458000:CDS
GGGTCATCCTATTTCGCATT+TGG 0.367659 3_3:+53163496 Msa0458000:CDS
TCAGAAATGGAATCAGTAAA+AGG 0.371924 3_3:+53164001 Msa0458000:CDS
GGAACTAGATTACTCTTATC+TGG 0.373199 3_3:+53163307 Msa0458000:CDS
TAAACCGAGCAGAAGAGATT+TGG 0.377785 3_3:+53163978 Msa0458000:CDS
GATGTCTTGCTTATATTGTA+TGG 0.379239 3_3:+53163839 Msa0458000:CDS
ATTGAAGCATTTGGTAGGAT+TGG 0.405260 3_3:+53163950 Msa0458000:CDS
TTTCTAACCCTCTTGTCAAC+CGG 0.408917 3_3:-53164229 None:intergenic
TTTCATCAAAATATTGTATG+TGG 0.418811 3_3:-53163621 None:intergenic
TAGCTTCCGCATTTCGTAGT+TGG 0.420282 3_3:+53162256 Msa0458000:CDS
TTGTTAGCCATTGAAGCATT+TGG 0.420325 3_3:+53163941 Msa0458000:CDS
GAATTCACAACTAAGCTTCA+TGG 0.422379 3_3:+53163332 Msa0458000:CDS
ATGAAGAAAATGAGGGAATT+GGG 0.423124 3_3:+53163476 Msa0458000:CDS
GGTGATGGAATGGGTAATAA+GGG 0.424602 3_3:+53163265 Msa0458000:intron
GAAAGAGTTGTCTCCAACCA+TGG 0.425848 3_3:-53164259 None:intergenic
AGACTGTAACTTTCAGCATC+AGG 0.431486 3_3:-53164463 None:intergenic
ATGCAGTAAGATATTTCATT+CGG 0.433940 3_3:-53163716 None:intergenic
AGAAGAGATTTGGTCAGAAA+TGG 0.433960 3_3:+53163988 Msa0458000:CDS
AAGACATCGGCACCACGAAC+GGG 0.436628 3_3:-53162294 None:intergenic
TGCATTCCTCGCCGAGCCGC+AGG 0.443711 3_3:+53163540 Msa0458000:CDS
AACTCGTTCTGAAATTCAAC+AGG 0.444891 3_3:-53163389 None:intergenic
AAATCCTTTCCAGCTCCTTC+CGG 0.445340 3_3:-53163874 None:intergenic
ACGTATCGACATCTTGTTCT+GGG 0.450192 3_3:+53164145 Msa0458000:CDS
AATCCTACCAAATGCTTCAA+TGG 0.450377 3_3:-53163948 None:intergenic
TGTCGATACGTTATGGCATT+CGG 0.450425 3_3:-53164133 None:intergenic
AACAAGATGTCGATACGTTA+TGG 0.450954 3_3:-53164140 None:intergenic
TCTTGGGAGCCGGAAGGAGC+TGG 0.467662 3_3:+53163865 Msa0458000:CDS
TAGAAATTCAACCCCATGGT+TGG 0.486994 3_3:+53164246 Msa0458000:CDS
GTTTAGATAAAGGTGTCGTA+AGG 0.489475 3_3:+53163438 Msa0458000:CDS
ATGTCTTGCTTATATTGTAT+GGG 0.493099 3_3:+53163840 Msa0458000:CDS
AGCTTTGAAGACATTAGACT+TGG 0.494188 3_3:+53164195 Msa0458000:CDS
CTGACCAAATCTCTTCTGCT+CGG 0.498246 3_3:-53163982 None:intergenic
AAAAGAGTTTGAAACTGAGA+TGG 0.504861 3_3:-53162164 None:intergenic
TTGAGTACATGAAGAAAATG+AGG 0.507855 3_3:+53163468 Msa0458000:CDS
TCTAGTTCCCTAGGTCTGTA+GGG 0.512719 3_3:-53163293 None:intergenic
TTGAGAAGGATGATTCTTGG+AGG 0.513508 3_3:+53164433 Msa0458000:CDS
AATTCACAACTAAGCTTCAT+GGG 0.513711 3_3:+53163333 Msa0458000:CDS
CGTGATGGCTTCCCCGTTCG+TGG 0.515655 3_3:+53162282 Msa0458000:CDS
TTTCGTAGTTGGATGCGTGA+TGG 0.517800 3_3:+53162267 Msa0458000:CDS
AAAGAGTTGTCTCCAACCAT+GGG 0.521395 3_3:-53164258 None:intergenic
GGGAGAGACCCTACAGACCT+AGG 0.524630 3_3:+53163285 Msa0458000:CDS
CTACTGCCCATGCAGTTGCT+AGG 0.525041 3_3:+53163744 Msa0458000:CDS
AAAGAGTTTGAAACTGAGAT+GGG 0.525372 3_3:-53162163 None:intergenic
GGGTTGCTTGAAATCTGGTA+AGG 0.527556 3_3:+53164165 Msa0458000:CDS
AAAGACATCGGCACCACGAA+CGG 0.536158 3_3:-53162295 None:intergenic
CGGGTTACTTACTCAAATGA+AGG 0.537724 3_3:+53163574 Msa0458000:CDS
TAAGAGTAATCTAGTTCCCT+AGG 0.539356 3_3:-53163302 None:intergenic
AGAATCGAAAAGCTTCCAAA+AGG 0.541136 3_3:+53162225 Msa0458000:CDS
ATCTAGTTCCCTAGGTCTGT+AGG 0.547930 3_3:-53163294 None:intergenic
CACTCCATGTTTGCAATACA+CGG 0.548170 3_3:-53164059 None:intergenic
GGAGCCGGAAGGAGCTGGAA+AGG 0.555615 3_3:+53163870 Msa0458000:CDS
AGGGAATAATTGGTCAACAT+TGG 0.557672 3_3:+53163817 Msa0458000:CDS
TGTATCATCTTCCTGCGGCT+CGG 0.562004 3_3:-53163551 None:intergenic
TGTATAACCTAGCAACTGCA+TGG 0.564141 3_3:-53163751 None:intergenic
GCTGTGGAGAAATCTATGAC+AGG 0.567821 3_3:+53163797 Msa0458000:CDS
TGAAATGTATGTTGAGGCTG+TGG 0.578376 3_3:+53163781 Msa0458000:CDS
TGTATGGGTATCTTGGGAGC+CGG 0.579555 3_3:+53163855 Msa0458000:CDS
CATCTTCCTGCGGCTCGGCG+AGG 0.581070 3_3:-53163546 None:intergenic
TAGCCATTGAAGCATTTGGT+AGG 0.588265 3_3:+53163945 Msa0458000:CDS
CTTCAATAAACGCGCACTTG+AGG 0.600772 3_3:+53162347 Msa0458000:CDS
ACGATCTTGAAAATTTGATG+AGG 0.601050 3_3:+53163660 Msa0458000:CDS
TTTAGATAAAGGTGTCGTAA+GGG 0.604676 3_3:+53163439 Msa0458000:CDS
GGAGAGACCCTACAGACCTA+GGG 0.608274 3_3:+53163286 Msa0458000:CDS
GGGTTAGAAATTCAACCCCA+TGG 0.608497 3_3:+53164242 Msa0458000:CDS
CTGTGGAGAAATCTATGACA+GGG 0.611010 3_3:+53163798 Msa0458000:CDS
GAGTGCTTGACAAAGCAGCT+AGG 0.617656 3_3:+53164077 Msa0458000:CDS
GTATAACCTAGCAACTGCAT+GGG 0.623501 3_3:-53163750 None:intergenic
GCTTTGAAGACATTAGACTT+GGG 0.625561 3_3:+53164196 Msa0458000:CDS
TGAGTACATGAAGAAAATGA+GGG 0.632731 3_3:+53163469 Msa0458000:CDS
ACTAGATTACTCTTATCTGG+TGG 0.633183 3_3:+53163310 Msa0458000:CDS
TATCTAAACAAGCAATCACA+AGG 0.634349 3_3:-53163424 None:intergenic
AGCCGCAGGAAGATGATACA+CGG 0.645693 3_3:+53163554 Msa0458000:CDS
TGGGTATCTTGGGAGCCGGA+AGG 0.646317 3_3:+53163859 Msa0458000:CDS
GTTAATGGTGTGAAAGACAT+CGG 0.649361 3_3:-53162307 None:intergenic
AGACATCGGCACCACGAACG+GGG 0.650644 3_3:-53162293 None:intergenic
ACCCGTGTATCATCTTCCTG+CGG 0.651249 3_3:-53163556 None:intergenic
ATGACCGTGTATTGCAAACA+TGG 0.660433 3_3:+53164055 Msa0458000:CDS
GCCGCAGGAAGATGATACAC+GGG 0.661831 3_3:+53163555 Msa0458000:CDS
AGATGGGTTTCATTGACACA+AGG 0.667945 3_3:-53162147 None:intergenic
AAGCTTCATGGGATTCCACA+CGG 0.668178 3_3:+53163344 Msa0458000:CDS
ACGCATCCAACTACGAAATG+CGG 0.689121 3_3:-53162262 None:intergenic
TGCAACTGAAATGTATGTTG+AGG 0.703650 3_3:+53163775 Msa0458000:CDS
AAGAGTTGTCTCCAACCATG+GGG 0.730200 3_3:-53164257 None:intergenic
ATATTGTATGTGGAAACATG+TGG 0.765769 3_3:-53163611 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCATACTATAACTTCTT+GGG + chr3_3:53162503-53162522 Msa0458000:intron 20.0%
!!! GTTGTTTTTATAAGTTATCT+TGG + chr3_3:53162785-53162804 Msa0458000:intron 20.0%
!!! ATTTTTCATAAGCTTTTTTG+AGG - chr3_3:53162828-53162847 None:intergenic 20.0%
!! TTTCATCAAAATATTGTATG+TGG - chr3_3:53163624-53163643 None:intergenic 20.0%
!!! CAATATTTTGATGAAAATAG+AGG + chr3_3:53163628-53163647 Msa0458000:CDS 20.0%
!!! TAACTTTTAGATCTAACAAA+GGG - chr3_3:53163920-53163939 None:intergenic 20.0%
!!! ATAACTTTTAGATCTAACAA+AGG - chr3_3:53163921-53163940 None:intergenic 20.0%
!! TGTATATAATACCTTGATTA+AGG + chr3_3:53164375-53164394 Msa0458000:CDS 20.0%
!! TTATCATACTATAACTTCTT+GGG + chr3_3:53162503-53162522 Msa0458000:intron 20.0%
!!! GTTGTTTTTATAAGTTATCT+TGG + chr3_3:53162785-53162804 Msa0458000:intron 20.0%
!!! ATTTTTCATAAGCTTTTTTG+AGG - chr3_3:53162828-53162847 None:intergenic 20.0%
!! TTTCATCAAAATATTGTATG+TGG - chr3_3:53163624-53163643 None:intergenic 20.0%
!!! CAATATTTTGATGAAAATAG+AGG + chr3_3:53163628-53163647 Msa0458000:CDS 20.0%
!!! TAACTTTTAGATCTAACAAA+GGG - chr3_3:53163920-53163939 None:intergenic 20.0%
!!! ATAACTTTTAGATCTAACAA+AGG - chr3_3:53163921-53163940 None:intergenic 20.0%
!! TGTATATAATACCTTGATTA+AGG + chr3_3:53164375-53164394 Msa0458000:CDS 20.0%
!! GAAAATGATAACTACCATTT+TGG + chr3_3:53162434-53162453 Msa0458000:intron 25.0%
! ATAAGTTGTTTATCCAAACA+TGG - chr3_3:53162460-53162479 None:intergenic 25.0%
! CTTATCATACTATAACTTCT+TGG + chr3_3:53162502-53162521 Msa0458000:intron 25.0%
!! GATAATTTTCATCAGCTATA+TGG + chr3_3:53163101-53163120 Msa0458000:intron 25.0%
! AATATTCAAGTCTCAAACAA+TGG - chr3_3:53163224-53163243 None:intergenic 25.0%
! ATGCAGTAAGATATTTCATT+CGG - chr3_3:53163719-53163738 None:intergenic 25.0%
! ATGTCTTGCTTATATTGTAT+GGG + chr3_3:53163840-53163859 Msa0458000:CDS 25.0%
! TTATATTGTATGGGTATCTT+GGG + chr3_3:53163849-53163868 Msa0458000:CDS 25.0%
!! AGGATTTGGAGTATTATTAA+AGG + chr3_3:53163890-53163909 Msa0458000:CDS 25.0%
! GTACAAAAATATGAAGACAA+AGG + chr3_3:53164102-53164121 Msa0458000:CDS 25.0%
!! TTCATAAAGCTAAGTATTGT+AGG + chr3_3:53164344-53164363 Msa0458000:CDS 25.0%
!! TTTTACATAAGCCTTAATCA+AGG - chr3_3:53164389-53164408 None:intergenic 25.0%
!!! ATAATCCAAATCTTTTGAGA+AGG + chr3_3:53164419-53164438 Msa0458000:CDS 25.0%
!! GAAAATGATAACTACCATTT+TGG + chr3_3:53162434-53162453 Msa0458000:intron 25.0%
! ATAAGTTGTTTATCCAAACA+TGG - chr3_3:53162460-53162479 None:intergenic 25.0%
! CTTATCATACTATAACTTCT+TGG + chr3_3:53162502-53162521 Msa0458000:intron 25.0%
!! GATAATTTTCATCAGCTATA+TGG + chr3_3:53163101-53163120 Msa0458000:intron 25.0%
! AATATTCAAGTCTCAAACAA+TGG - chr3_3:53163224-53163243 None:intergenic 25.0%
! ATGCAGTAAGATATTTCATT+CGG - chr3_3:53163719-53163738 None:intergenic 25.0%
! ATGTCTTGCTTATATTGTAT+GGG + chr3_3:53163840-53163859 Msa0458000:CDS 25.0%
! TTATATTGTATGGGTATCTT+GGG + chr3_3:53163849-53163868 Msa0458000:CDS 25.0%
!! AGGATTTGGAGTATTATTAA+AGG + chr3_3:53163890-53163909 Msa0458000:CDS 25.0%
! GTACAAAAATATGAAGACAA+AGG + chr3_3:53164102-53164121 Msa0458000:CDS 25.0%
!! TTCATAAAGCTAAGTATTGT+AGG + chr3_3:53164344-53164363 Msa0458000:CDS 25.0%
!! TTTTACATAAGCCTTAATCA+AGG - chr3_3:53164389-53164408 None:intergenic 25.0%
!!! ATAATCCAAATCTTTTGAGA+AGG + chr3_3:53164419-53164438 Msa0458000:CDS 25.0%
! AAAGAGTTTGAAACTGAGAT+GGG - chr3_3:53162166-53162185 None:intergenic 30.0%
! AAAAGAGTTTGAAACTGAGA+TGG - chr3_3:53162167-53162186 None:intergenic 30.0%
!! CTTATTTTCACAAAGTCTCT+AGG - chr3_3:53162608-53162627 None:intergenic 30.0%
ACAAGCTATTTATCCAAACA+AGG - chr3_3:53162689-53162708 None:intergenic 30.0%
TCAAATAAACCAATCCAAAG+AGG + chr3_3:53162915-53162934 Msa0458000:intron 30.0%
AGACAAAACACAGACAAATT+GGG - chr3_3:53162941-53162960 None:intergenic 30.0%
TAGACAAAACACAGACAAAT+TGG - chr3_3:53162942-53162961 None:intergenic 30.0%
! ATTTGTCTGTGTTTTGTCTA+AGG + chr3_3:53162942-53162961 Msa0458000:intron 30.0%
AACACATAAAGACACTGTTT+GGG - chr3_3:53163191-53163210 None:intergenic 30.0%
GTGTCTTTATGTGTTGTATA+CGG + chr3_3:53163196-53163215 Msa0458000:intron 30.0%
! TTACTCTTCTGACTTTTGAT+AGG + chr3_3:53163244-53163263 Msa0458000:intron 30.0%
AATTCACAACTAAGCTTCAT+GGG + chr3_3:53163333-53163352 Msa0458000:CDS 30.0%
TATCTAAACAAGCAATCACA+AGG - chr3_3:53163427-53163446 None:intergenic 30.0%
GTGATTGCTTGTTTAGATAA+AGG + chr3_3:53163428-53163447 Msa0458000:CDS 30.0%
!! TTTAGATAAAGGTGTCGTAA+GGG + chr3_3:53163439-53163458 Msa0458000:CDS 30.0%
TTGAGTACATGAAGAAAATG+AGG + chr3_3:53163468-53163487 Msa0458000:CDS 30.0%
TGAGTACATGAAGAAAATGA+GGG + chr3_3:53163469-53163488 Msa0458000:CDS 30.0%
ATGAAGAAAATGAGGGAATT+GGG + chr3_3:53163476-53163495 Msa0458000:CDS 30.0%
TTAAAGACCAAATGCGAAAT+AGG - chr3_3:53163506-53163525 None:intergenic 30.0%
ATATTGTATGTGGAAACATG+TGG - chr3_3:53163614-53163633 None:intergenic 30.0%
!! ATTTTCAAGATCGTGTTCAT+TGG - chr3_3:53163654-53163673 None:intergenic 30.0%
ACGATCTTGAAAATTTGATG+AGG + chr3_3:53163660-53163679 Msa0458000:CDS 30.0%
!!! GGTTTTTTGATCGAATGAAA+CGG + chr3_3:53163681-53163700 Msa0458000:CDS 30.0%
!!! GTTTTTTGATCGAATGAAAC+GGG + chr3_3:53163682-53163701 Msa0458000:CDS 30.0%
AATCTATGACAGGGAATAAT+TGG + chr3_3:53163807-53163826 Msa0458000:CDS 30.0%
GATGTCTTGCTTATATTGTA+TGG + chr3_3:53163839-53163858 Msa0458000:CDS 30.0%
CTTATATTGTATGGGTATCT+TGG + chr3_3:53163848-53163867 Msa0458000:CDS 30.0%
TCAGAAATGGAATCAGTAAA+AGG + chr3_3:53164001-53164020 Msa0458000:CDS 30.0%
ATCATCCTTCTCAAAAGATT+TGG - chr3_3:53164427-53164446 None:intergenic 30.0%
TGAAAATTGCTGAACAGTTT+CGG + chr3_3:53164488-53164507 Msa0458000:CDS 30.0%
! AAAGAGTTTGAAACTGAGAT+GGG - chr3_3:53162166-53162185 None:intergenic 30.0%
! AAAAGAGTTTGAAACTGAGA+TGG - chr3_3:53162167-53162186 None:intergenic 30.0%
!! CTTATTTTCACAAAGTCTCT+AGG - chr3_3:53162608-53162627 None:intergenic 30.0%
ACAAGCTATTTATCCAAACA+AGG - chr3_3:53162689-53162708 None:intergenic 30.0%
TCAAATAAACCAATCCAAAG+AGG + chr3_3:53162915-53162934 Msa0458000:intron 30.0%
AGACAAAACACAGACAAATT+GGG - chr3_3:53162941-53162960 None:intergenic 30.0%
TAGACAAAACACAGACAAAT+TGG - chr3_3:53162942-53162961 None:intergenic 30.0%
! ATTTGTCTGTGTTTTGTCTA+AGG + chr3_3:53162942-53162961 Msa0458000:intron 30.0%
AACACATAAAGACACTGTTT+GGG - chr3_3:53163191-53163210 None:intergenic 30.0%
GTGTCTTTATGTGTTGTATA+CGG + chr3_3:53163196-53163215 Msa0458000:intron 30.0%
! TTACTCTTCTGACTTTTGAT+AGG + chr3_3:53163244-53163263 Msa0458000:intron 30.0%
AATTCACAACTAAGCTTCAT+GGG + chr3_3:53163333-53163352 Msa0458000:CDS 30.0%
TATCTAAACAAGCAATCACA+AGG - chr3_3:53163427-53163446 None:intergenic 30.0%
GTGATTGCTTGTTTAGATAA+AGG + chr3_3:53163428-53163447 Msa0458000:CDS 30.0%
!! TTTAGATAAAGGTGTCGTAA+GGG + chr3_3:53163439-53163458 Msa0458000:CDS 30.0%
TTGAGTACATGAAGAAAATG+AGG + chr3_3:53163468-53163487 Msa0458000:CDS 30.0%
TGAGTACATGAAGAAAATGA+GGG + chr3_3:53163469-53163488 Msa0458000:CDS 30.0%
ATGAAGAAAATGAGGGAATT+GGG + chr3_3:53163476-53163495 Msa0458000:CDS 30.0%
TTAAAGACCAAATGCGAAAT+AGG - chr3_3:53163506-53163525 None:intergenic 30.0%
ATATTGTATGTGGAAACATG+TGG - chr3_3:53163614-53163633 None:intergenic 30.0%
!! ATTTTCAAGATCGTGTTCAT+TGG - chr3_3:53163654-53163673 None:intergenic 30.0%
ACGATCTTGAAAATTTGATG+AGG + chr3_3:53163660-53163679 Msa0458000:CDS 30.0%
!!! GGTTTTTTGATCGAATGAAA+CGG + chr3_3:53163681-53163700 Msa0458000:CDS 30.0%
!!! GTTTTTTGATCGAATGAAAC+GGG + chr3_3:53163682-53163701 Msa0458000:CDS 30.0%
AATCTATGACAGGGAATAAT+TGG + chr3_3:53163807-53163826 Msa0458000:CDS 30.0%
GATGTCTTGCTTATATTGTA+TGG + chr3_3:53163839-53163858 Msa0458000:CDS 30.0%
CTTATATTGTATGGGTATCT+TGG + chr3_3:53163848-53163867 Msa0458000:CDS 30.0%
TCAGAAATGGAATCAGTAAA+AGG + chr3_3:53164001-53164020 Msa0458000:CDS 30.0%
ATCATCCTTCTCAAAAGATT+TGG - chr3_3:53164427-53164446 None:intergenic 30.0%
TGAAAATTGCTGAACAGTTT+CGG + chr3_3:53164488-53164507 Msa0458000:CDS 30.0%
TTCTCTTACACAAGCTATCT+TGG - chr3_3:53162209-53162228 None:intergenic 35.0%
AGAATCGAAAAGCTTCCAAA+AGG + chr3_3:53162225-53162244 Msa0458000:CDS 35.0%
! GAAGCTATAGATTCTCCTTT+TGG - chr3_3:53162243-53162262 None:intergenic 35.0%
GTTAATGGTGTGAAAGACAT+CGG - chr3_3:53162310-53162329 None:intergenic 35.0%
!! TGAAGTTGAGTTTTCTGAGA+CGG - chr3_3:53162332-53162351 None:intergenic 35.0%
TTATCCAAACATGGCCAAAA+TGG - chr3_3:53162451-53162470 None:intergenic 35.0%
! TATTTTGCAGCTTATAGCAC+AGG + chr3_3:53162477-53162496 Msa0458000:intron 35.0%
! ATTTTGCAGCTTATAGCACA+GGG + chr3_3:53162478-53162497 Msa0458000:intron 35.0%
CAACACATAAAGACACTGTT+TGG - chr3_3:53163192-53163211 None:intergenic 35.0%
! TTCTGACTTTTGATAGGTGA+TGG + chr3_3:53163250-53163269 Msa0458000:intron 35.0%
!!! ACTTTTGATAGGTGATGGAA+TGG + chr3_3:53163255-53163274 Msa0458000:intron 35.0%
!!! CTTTTGATAGGTGATGGAAT+GGG + chr3_3:53163256-53163275 Msa0458000:intron 35.0%
! TAAGAGTAATCTAGTTCCCT+AGG - chr3_3:53163305-53163324 None:intergenic 35.0%
GGAACTAGATTACTCTTATC+TGG + chr3_3:53163307-53163326 Msa0458000:CDS 35.0%
ACTAGATTACTCTTATCTGG+TGG + chr3_3:53163310-53163329 Msa0458000:CDS 35.0%
GAATTCACAACTAAGCTTCA+TGG + chr3_3:53163332-53163351 Msa0458000:CDS 35.0%
!! AACTCGTTCTGAAATTCAAC+AGG - chr3_3:53163392-53163411 None:intergenic 35.0%
!! GTTTAGATAAAGGTGTCGTA+AGG + chr3_3:53163438-53163457 Msa0458000:CDS 35.0%
CATGAAGAAAATGAGGGAAT+TGG + chr3_3:53163475-53163494 Msa0458000:CDS 35.0%
TGCAACTGAAATGTATGTTG+AGG + chr3_3:53163775-53163794 Msa0458000:CDS 35.0%
AGGGAATAATTGGTCAACAT+TGG + chr3_3:53163817-53163836 Msa0458000:CDS 35.0%
! TTGTTAGCCATTGAAGCATT+TGG + chr3_3:53163941-53163960 Msa0458000:CDS 35.0%
AATCCTACCAAATGCTTCAA+TGG - chr3_3:53163951-53163970 None:intergenic 35.0%
! ATTGAAGCATTTGGTAGGAT+TGG + chr3_3:53163950-53163969 Msa0458000:CDS 35.0%
! AGAAGAGATTTGGTCAGAAA+TGG + chr3_3:53163988-53164007 Msa0458000:CDS 35.0%
AACAAGATGTCGATACGTTA+TGG - chr3_3:53164143-53164162 None:intergenic 35.0%
!! AGCTTTGAAGACATTAGACT+TGG + chr3_3:53164195-53164214 Msa0458000:CDS 35.0%
!! GCTTTGAAGACATTAGACTT+GGG + chr3_3:53164196-53164215 Msa0458000:CDS 35.0%
! CTGAGCTTTTTGCTGAAAAA+GGG + chr3_3:53164287-53164306 Msa0458000:CDS 35.0%
! TGAGCTTTTTGCTGAAAAAG+GGG + chr3_3:53164288-53164307 Msa0458000:CDS 35.0%
!! CTTTTGAGAAGGATGATTCT+TGG + chr3_3:53164430-53164449 Msa0458000:CDS 35.0%
TTCTCTTACACAAGCTATCT+TGG - chr3_3:53162209-53162228 None:intergenic 35.0%
AGAATCGAAAAGCTTCCAAA+AGG + chr3_3:53162225-53162244 Msa0458000:CDS 35.0%
! GAAGCTATAGATTCTCCTTT+TGG - chr3_3:53162243-53162262 None:intergenic 35.0%
GTTAATGGTGTGAAAGACAT+CGG - chr3_3:53162310-53162329 None:intergenic 35.0%
!! TGAAGTTGAGTTTTCTGAGA+CGG - chr3_3:53162332-53162351 None:intergenic 35.0%
TTATCCAAACATGGCCAAAA+TGG - chr3_3:53162451-53162470 None:intergenic 35.0%
! TATTTTGCAGCTTATAGCAC+AGG + chr3_3:53162477-53162496 Msa0458000:intron 35.0%
! ATTTTGCAGCTTATAGCACA+GGG + chr3_3:53162478-53162497 Msa0458000:intron 35.0%
CAACACATAAAGACACTGTT+TGG - chr3_3:53163192-53163211 None:intergenic 35.0%
! TTCTGACTTTTGATAGGTGA+TGG + chr3_3:53163250-53163269 Msa0458000:intron 35.0%
!!! ACTTTTGATAGGTGATGGAA+TGG + chr3_3:53163255-53163274 Msa0458000:intron 35.0%
!!! CTTTTGATAGGTGATGGAAT+GGG + chr3_3:53163256-53163275 Msa0458000:intron 35.0%
! TAAGAGTAATCTAGTTCCCT+AGG - chr3_3:53163305-53163324 None:intergenic 35.0%
GGAACTAGATTACTCTTATC+TGG + chr3_3:53163307-53163326 Msa0458000:CDS 35.0%
ACTAGATTACTCTTATCTGG+TGG + chr3_3:53163310-53163329 Msa0458000:CDS 35.0%
GAATTCACAACTAAGCTTCA+TGG + chr3_3:53163332-53163351 Msa0458000:CDS 35.0%
!! AACTCGTTCTGAAATTCAAC+AGG - chr3_3:53163392-53163411 None:intergenic 35.0%
!! GTTTAGATAAAGGTGTCGTA+AGG + chr3_3:53163438-53163457 Msa0458000:CDS 35.0%
CATGAAGAAAATGAGGGAAT+TGG + chr3_3:53163475-53163494 Msa0458000:CDS 35.0%
TGCAACTGAAATGTATGTTG+AGG + chr3_3:53163775-53163794 Msa0458000:CDS 35.0%
AGGGAATAATTGGTCAACAT+TGG + chr3_3:53163817-53163836 Msa0458000:CDS 35.0%
! TTGTTAGCCATTGAAGCATT+TGG + chr3_3:53163941-53163960 Msa0458000:CDS 35.0%
AATCCTACCAAATGCTTCAA+TGG - chr3_3:53163951-53163970 None:intergenic 35.0%
! ATTGAAGCATTTGGTAGGAT+TGG + chr3_3:53163950-53163969 Msa0458000:CDS 35.0%
! AGAAGAGATTTGGTCAGAAA+TGG + chr3_3:53163988-53164007 Msa0458000:CDS 35.0%
AACAAGATGTCGATACGTTA+TGG - chr3_3:53164143-53164162 None:intergenic 35.0%
!! AGCTTTGAAGACATTAGACT+TGG + chr3_3:53164195-53164214 Msa0458000:CDS 35.0%
!! GCTTTGAAGACATTAGACTT+GGG + chr3_3:53164196-53164215 Msa0458000:CDS 35.0%
! CTGAGCTTTTTGCTGAAAAA+GGG + chr3_3:53164287-53164306 Msa0458000:CDS 35.0%
! TGAGCTTTTTGCTGAAAAAG+GGG + chr3_3:53164288-53164307 Msa0458000:CDS 35.0%
!! CTTTTGAGAAGGATGATTCT+TGG + chr3_3:53164430-53164449 Msa0458000:CDS 35.0%
! AGATGGGTTTCATTGACACA+AGG - chr3_3:53162150-53162169 None:intergenic 40.0%
!!! GAGTTTTCTGAGACGGTTAA+TGG - chr3_3:53162325-53162344 None:intergenic 40.0%
!! ACTACCATTTTGGCCATGTT+TGG + chr3_3:53162444-53162463 Msa0458000:intron 40.0%
! TTTTGCAGCTTATAGCACAG+GGG + chr3_3:53162479-53162498 Msa0458000:intron 40.0%
TCACGAGTTCTTCCAAACAT+TGG + chr3_3:53162663-53162682 Msa0458000:intron 40.0%
!! TTCCAAACATTGGCCTTGTT+TGG + chr3_3:53162673-53162692 Msa0458000:intron 40.0%
ATCCAAACAAGGCCAATGTT+TGG - chr3_3:53162678-53162697 None:intergenic 40.0%
!! AGGTGATGGAATGGGTAATA+AGG + chr3_3:53163264-53163283 Msa0458000:intron 40.0%
!! GGTGATGGAATGGGTAATAA+GGG + chr3_3:53163265-53163284 Msa0458000:intron 40.0%
CGGGTTACTTACTCAAATGA+AGG + chr3_3:53163574-53163593 Msa0458000:CDS 40.0%
GTATAACCTAGCAACTGCAT+GGG - chr3_3:53163753-53163772 None:intergenic 40.0%
TGTATAACCTAGCAACTGCA+TGG - chr3_3:53163754-53163773 None:intergenic 40.0%
TGAAATGTATGTTGAGGCTG+TGG + chr3_3:53163781-53163800 Msa0458000:CDS 40.0%
CTGTGGAGAAATCTATGACA+GGG + chr3_3:53163798-53163817 Msa0458000:CDS 40.0%
! TAGCCATTGAAGCATTTGGT+AGG + chr3_3:53163945-53163964 Msa0458000:CDS 40.0%
TAAACCGAGCAGAAGAGATT+TGG + chr3_3:53163978-53163997 Msa0458000:CDS 40.0%
ATGACCGTGTATTGCAAACA+TGG + chr3_3:53164055-53164074 Msa0458000:CDS 40.0%
CACTCCATGTTTGCAATACA+CGG - chr3_3:53164062-53164081 None:intergenic 40.0%
TGTCGATACGTTATGGCATT+CGG - chr3_3:53164136-53164155 None:intergenic 40.0%
! AACGTATCGACATCTTGTTC+TGG + chr3_3:53164144-53164163 Msa0458000:CDS 40.0%
! ACGTATCGACATCTTGTTCT+GGG + chr3_3:53164145-53164164 Msa0458000:CDS 40.0%
TTTCTAACCCTCTTGTCAAC+CGG - chr3_3:53164232-53164251 None:intergenic 40.0%
TAGAAATTCAACCCCATGGT+TGG + chr3_3:53164246-53164265 Msa0458000:CDS 40.0%
AAAGAGTTGTCTCCAACCAT+GGG - chr3_3:53164261-53164280 None:intergenic 40.0%
! GCTGAGCTTTTTGCTGAAAA+AGG + chr3_3:53164286-53164305 Msa0458000:CDS 40.0%
TTGAGAAGGATGATTCTTGG+AGG + chr3_3:53164433-53164452 Msa0458000:CDS 40.0%
AGACTGTAACTTTCAGCATC+AGG - chr3_3:53164466-53164485 None:intergenic 40.0%
! AGATGGGTTTCATTGACACA+AGG - chr3_3:53162150-53162169 None:intergenic 40.0%
!!! GAGTTTTCTGAGACGGTTAA+TGG - chr3_3:53162325-53162344 None:intergenic 40.0%
!! ACTACCATTTTGGCCATGTT+TGG + chr3_3:53162444-53162463 Msa0458000:intron 40.0%
! TTTTGCAGCTTATAGCACAG+GGG + chr3_3:53162479-53162498 Msa0458000:intron 40.0%
TCACGAGTTCTTCCAAACAT+TGG + chr3_3:53162663-53162682 Msa0458000:intron 40.0%
!! TTCCAAACATTGGCCTTGTT+TGG + chr3_3:53162673-53162692 Msa0458000:intron 40.0%
ATCCAAACAAGGCCAATGTT+TGG - chr3_3:53162678-53162697 None:intergenic 40.0%
!! AGGTGATGGAATGGGTAATA+AGG + chr3_3:53163264-53163283 Msa0458000:intron 40.0%
!! GGTGATGGAATGGGTAATAA+GGG + chr3_3:53163265-53163284 Msa0458000:intron 40.0%
CGGGTTACTTACTCAAATGA+AGG + chr3_3:53163574-53163593 Msa0458000:CDS 40.0%
GTATAACCTAGCAACTGCAT+GGG - chr3_3:53163753-53163772 None:intergenic 40.0%
TGTATAACCTAGCAACTGCA+TGG - chr3_3:53163754-53163773 None:intergenic 40.0%
TGAAATGTATGTTGAGGCTG+TGG + chr3_3:53163781-53163800 Msa0458000:CDS 40.0%
CTGTGGAGAAATCTATGACA+GGG + chr3_3:53163798-53163817 Msa0458000:CDS 40.0%
! TAGCCATTGAAGCATTTGGT+AGG + chr3_3:53163945-53163964 Msa0458000:CDS 40.0%
TAAACCGAGCAGAAGAGATT+TGG + chr3_3:53163978-53163997 Msa0458000:CDS 40.0%
ATGACCGTGTATTGCAAACA+TGG + chr3_3:53164055-53164074 Msa0458000:CDS 40.0%
CACTCCATGTTTGCAATACA+CGG - chr3_3:53164062-53164081 None:intergenic 40.0%
TGTCGATACGTTATGGCATT+CGG - chr3_3:53164136-53164155 None:intergenic 40.0%
! AACGTATCGACATCTTGTTC+TGG + chr3_3:53164144-53164163 Msa0458000:CDS 40.0%
! ACGTATCGACATCTTGTTCT+GGG + chr3_3:53164145-53164164 Msa0458000:CDS 40.0%
TTTCTAACCCTCTTGTCAAC+CGG - chr3_3:53164232-53164251 None:intergenic 40.0%
TAGAAATTCAACCCCATGGT+TGG + chr3_3:53164246-53164265 Msa0458000:CDS 40.0%
AAAGAGTTGTCTCCAACCAT+GGG - chr3_3:53164261-53164280 None:intergenic 40.0%
! GCTGAGCTTTTTGCTGAAAA+AGG + chr3_3:53164286-53164305 Msa0458000:CDS 40.0%
TTGAGAAGGATGATTCTTGG+AGG + chr3_3:53164433-53164452 Msa0458000:CDS 40.0%
AGACTGTAACTTTCAGCATC+AGG - chr3_3:53164466-53164485 None:intergenic 40.0%
TAGCTTCCGCATTTCGTAGT+TGG + chr3_3:53162256-53162275 Msa0458000:CDS 45.0%
ACGCATCCAACTACGAAATG+CGG - chr3_3:53162265-53162284 None:intergenic 45.0%
TTTCGTAGTTGGATGCGTGA+TGG + chr3_3:53162267-53162286 Msa0458000:CDS 45.0%
CTTCAATAAACGCGCACTTG+AGG + chr3_3:53162347-53162366 Msa0458000:CDS 45.0%
CAAATTGGGCCTCTTTGGAT+TGG - chr3_3:53162927-53162946 None:intergenic 45.0%
ACAGACAAATTGGGCCTCTT+TGG - chr3_3:53162932-53162951 None:intergenic 45.0%
! GTCTAAGGCTCCATTGTCTT+TGG + chr3_3:53162957-53162976 Msa0458000:intron 45.0%
CCAAACAGAGCCAAAGACAA+TGG - chr3_3:53162970-53162989 None:intergenic 45.0%
!! CCATTGTCTTTGGCTCTGTT+TGG + chr3_3:53162967-53162986 Msa0458000:intron 45.0%
! TCTAGTTCCCTAGGTCTGTA+GGG - chr3_3:53163296-53163315 None:intergenic 45.0%
! ATCTAGTTCCCTAGGTCTGT+AGG - chr3_3:53163297-53163316 None:intergenic 45.0%
AAGCTTCATGGGATTCCACA+CGG + chr3_3:53163344-53163363 Msa0458000:CDS 45.0%
GGGTCATCCTATTTCGCATT+TGG + chr3_3:53163496-53163515 Msa0458000:CDS 45.0%
GCTGTGGAGAAATCTATGAC+AGG + chr3_3:53163797-53163816 Msa0458000:CDS 45.0%
AAATCCTTTCCAGCTCCTTC+CGG - chr3_3:53163877-53163896 None:intergenic 45.0%
CTGACCAAATCTCTTCTGCT+CGG - chr3_3:53163985-53164004 None:intergenic 45.0%
! GTTCTGGGTTGCTTGAAATC+TGG + chr3_3:53164160-53164179 Msa0458000:CDS 45.0%
GGGTTGCTTGAAATCTGGTA+AGG + chr3_3:53164165-53164184 Msa0458000:CDS 45.0%
GGGTTAGAAATTCAACCCCA+TGG + chr3_3:53164242-53164261 Msa0458000:CDS 45.0%
AAGAGTTGTCTCCAACCATG+GGG - chr3_3:53164260-53164279 None:intergenic 45.0%
GAAAGAGTTGTCTCCAACCA+TGG - chr3_3:53164262-53164281 None:intergenic 45.0%
TAGCTTCCGCATTTCGTAGT+TGG + chr3_3:53162256-53162275 Msa0458000:CDS 45.0%
ACGCATCCAACTACGAAATG+CGG - chr3_3:53162265-53162284 None:intergenic 45.0%
TTTCGTAGTTGGATGCGTGA+TGG + chr3_3:53162267-53162286 Msa0458000:CDS 45.0%
CTTCAATAAACGCGCACTTG+AGG + chr3_3:53162347-53162366 Msa0458000:CDS 45.0%
CAAATTGGGCCTCTTTGGAT+TGG - chr3_3:53162927-53162946 None:intergenic 45.0%
ACAGACAAATTGGGCCTCTT+TGG - chr3_3:53162932-53162951 None:intergenic 45.0%
! GTCTAAGGCTCCATTGTCTT+TGG + chr3_3:53162957-53162976 Msa0458000:intron 45.0%
CCAAACAGAGCCAAAGACAA+TGG - chr3_3:53162970-53162989 None:intergenic 45.0%
!! CCATTGTCTTTGGCTCTGTT+TGG + chr3_3:53162967-53162986 Msa0458000:intron 45.0%
! TCTAGTTCCCTAGGTCTGTA+GGG - chr3_3:53163296-53163315 None:intergenic 45.0%
! ATCTAGTTCCCTAGGTCTGT+AGG - chr3_3:53163297-53163316 None:intergenic 45.0%
AAGCTTCATGGGATTCCACA+CGG + chr3_3:53163344-53163363 Msa0458000:CDS 45.0%
GGGTCATCCTATTTCGCATT+TGG + chr3_3:53163496-53163515 Msa0458000:CDS 45.0%
GCTGTGGAGAAATCTATGAC+AGG + chr3_3:53163797-53163816 Msa0458000:CDS 45.0%
AAATCCTTTCCAGCTCCTTC+CGG - chr3_3:53163877-53163896 None:intergenic 45.0%
CTGACCAAATCTCTTCTGCT+CGG - chr3_3:53163985-53164004 None:intergenic 45.0%
! GTTCTGGGTTGCTTGAAATC+TGG + chr3_3:53164160-53164179 Msa0458000:CDS 45.0%
GGGTTGCTTGAAATCTGGTA+AGG + chr3_3:53164165-53164184 Msa0458000:CDS 45.0%
GGGTTAGAAATTCAACCCCA+TGG + chr3_3:53164242-53164261 Msa0458000:CDS 45.0%
AAGAGTTGTCTCCAACCATG+GGG - chr3_3:53164260-53164279 None:intergenic 45.0%
GAAAGAGTTGTCTCCAACCA+TGG - chr3_3:53164262-53164281 None:intergenic 45.0%
AAAGACATCGGCACCACGAA+CGG - chr3_3:53162298-53162317 None:intergenic 50.0%
! GTGAAGAGCTTTTCACCGTG+TGG - chr3_3:53163362-53163381 None:intergenic 50.0%
TGTATCATCTTCCTGCGGCT+CGG - chr3_3:53163554-53163573 None:intergenic 50.0%
AGCCGCAGGAAGATGATACA+CGG + chr3_3:53163554-53163573 Msa0458000:CDS 50.0%
ACCCGTGTATCATCTTCCTG+CGG - chr3_3:53163559-53163578 None:intergenic 50.0%
TGTATGGGTATCTTGGGAGC+CGG + chr3_3:53163855-53163874 Msa0458000:CDS 50.0%
GGAAGGAGCTGGAAAGGATT+TGG + chr3_3:53163876-53163895 Msa0458000:CDS 50.0%
GAGTGCTTGACAAAGCAGCT+AGG + chr3_3:53164077-53164096 Msa0458000:CDS 50.0%
! AGACTTGGGCATGCGTTTTC+CGG + chr3_3:53164210-53164229 Msa0458000:CDS 50.0%
! TGCGTTTTCCGGTTGACAAG+AGG + chr3_3:53164221-53164240 Msa0458000:CDS 50.0%
! GCGTTTTCCGGTTGACAAGA+GGG + chr3_3:53164222-53164241 Msa0458000:CDS 50.0%
AAAGACATCGGCACCACGAA+CGG - chr3_3:53162298-53162317 None:intergenic 50.0%
! GTGAAGAGCTTTTCACCGTG+TGG - chr3_3:53163362-53163381 None:intergenic 50.0%
TGTATCATCTTCCTGCGGCT+CGG - chr3_3:53163554-53163573 None:intergenic 50.0%
AGCCGCAGGAAGATGATACA+CGG + chr3_3:53163554-53163573 Msa0458000:CDS 50.0%
ACCCGTGTATCATCTTCCTG+CGG - chr3_3:53163559-53163578 None:intergenic 50.0%
TGTATGGGTATCTTGGGAGC+CGG + chr3_3:53163855-53163874 Msa0458000:CDS 50.0%
GGAAGGAGCTGGAAAGGATT+TGG + chr3_3:53163876-53163895 Msa0458000:CDS 50.0%
GAGTGCTTGACAAAGCAGCT+AGG + chr3_3:53164077-53164096 Msa0458000:CDS 50.0%
! AGACTTGGGCATGCGTTTTC+CGG + chr3_3:53164210-53164229 Msa0458000:CDS 50.0%
! TGCGTTTTCCGGTTGACAAG+AGG + chr3_3:53164221-53164240 Msa0458000:CDS 50.0%
! GCGTTTTCCGGTTGACAAGA+GGG + chr3_3:53164222-53164241 Msa0458000:CDS 50.0%
AAGACATCGGCACCACGAAC+GGG - chr3_3:53162297-53162316 None:intergenic 55.0%
GGAGAGACCCTACAGACCTA+GGG + chr3_3:53163286-53163305 Msa0458000:CDS 55.0%
GCCGCAGGAAGATGATACAC+GGG + chr3_3:53163555-53163574 Msa0458000:CDS 55.0%
CTACTGCCCATGCAGTTGCT+AGG + chr3_3:53163744-53163763 Msa0458000:CDS 55.0%
AAGACATCGGCACCACGAAC+GGG - chr3_3:53162297-53162316 None:intergenic 55.0%
GGAGAGACCCTACAGACCTA+GGG + chr3_3:53163286-53163305 Msa0458000:CDS 55.0%
GCCGCAGGAAGATGATACAC+GGG + chr3_3:53163555-53163574 Msa0458000:CDS 55.0%
CTACTGCCCATGCAGTTGCT+AGG + chr3_3:53163744-53163763 Msa0458000:CDS 55.0%
AGACATCGGCACCACGAACG+GGG - chr3_3:53162296-53162315 None:intergenic 60.0%
GGGAGAGACCCTACAGACCT+AGG + chr3_3:53163285-53163304 Msa0458000:CDS 60.0%
TGGGTATCTTGGGAGCCGGA+AGG + chr3_3:53163859-53163878 Msa0458000:CDS 60.0%
AGACATCGGCACCACGAACG+GGG - chr3_3:53162296-53162315 None:intergenic 60.0%
GGGAGAGACCCTACAGACCT+AGG + chr3_3:53163285-53163304 Msa0458000:CDS 60.0%
TGGGTATCTTGGGAGCCGGA+AGG + chr3_3:53163859-53163878 Msa0458000:CDS 60.0%
CGTGATGGCTTCCCCGTTCG+TGG + chr3_3:53162282-53162301 Msa0458000:CDS 65.0%
TCTTGGGAGCCGGAAGGAGC+TGG + chr3_3:53163865-53163884 Msa0458000:CDS 65.0%
GGAGCCGGAAGGAGCTGGAA+AGG + chr3_3:53163870-53163889 Msa0458000:CDS 65.0%
CGTGATGGCTTCCCCGTTCG+TGG + chr3_3:53162282-53162301 Msa0458000:CDS 65.0%
TCTTGGGAGCCGGAAGGAGC+TGG + chr3_3:53163865-53163884 Msa0458000:CDS 65.0%
GGAGCCGGAAGGAGCTGGAA+AGG + chr3_3:53163870-53163889 Msa0458000:CDS 65.0%
TGCATTCCTCGCCGAGCCGC+AGG + chr3_3:53163540-53163559 Msa0458000:CDS 70.0%
! CATCTTCCTGCGGCTCGGCG+AGG - chr3_3:53163549-53163568 None:intergenic 70.0%
TGCATTCCTCGCCGAGCCGC+AGG + chr3_3:53163540-53163559 Msa0458000:CDS 70.0%
! CATCTTCCTGCGGCTCGGCG+AGG - chr3_3:53163549-53163568 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 53162081 53164516 53162081 ID=Msa0458000;Name=Msa0458000
chr3_3 mRNA 53162081 53164516 53162081 ID=Msa0458000-mRNA-1;Parent=Msa0458000;Name=Msa0458000-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0|1|1|1|2|0|512
chr3_3 exon 53162081 53162368 53162081 ID=Msa0458000-mRNA-1:exon:10306;Parent=Msa0458000-mRNA-1
chr3_3 exon 53163266 53164516 53163266 ID=Msa0458000-mRNA-1:exon:10307;Parent=Msa0458000-mRNA-1
chr3_3 CDS 53162081 53162368 53162081 ID=Msa0458000-mRNA-1:cds;Parent=Msa0458000-mRNA-1
chr3_3 CDS 53163266 53164516 53163266 ID=Msa0458000-mRNA-1:cds;Parent=Msa0458000-mRNA-1
Gene Sequence

>Msa0458000

ATGAGCATGCGAAATCTAATGAGTATAGCAATACGCGCGAAGTTCATAGAGACAATACGTCGAACACCTTGTGTCAATGAAACCCATCTCAGTTTCAAACTCTTTTGCACACAAACAACTCAAGACCAAGATAGCTTGTGTAAGAGAATCGAAAAGCTTCCAAAAGGAGAATCTATAGCTTCCGCATTTCGTAGTTGGATGCGTGATGGCTTCCCCGTTCGTGGTGCCGATGTCTTTCACACCATTAACCGTCTCAGAAAACTCAACTTCAATAAACGCGCACTTGAGGTGATGGAATGGGTAATAAGGGAGAGACCCTACAGACCTAGGGAACTAGATTACTCTTATCTGGTGGAATTCACAACTAAGCTTCATGGGATTCCACACGGTGAAAAGCTCTTCACTCGTGTTCCTGTTGAATTTCAGAACGAGTTACTCTATAACAACCTTGTGATTGCTTGTTTAGATAAAGGTGTCGTAAGGGTTTCACTTGAGTACATGAAGAAAATGAGGGAATTGGGTCATCCTATTTCGCATTTGGTCTTTAATCGCTTGATAATTCTGCATTCCTCGCCGAGCCGCAGGAAGATGATACACGGGTTACTTACTCAAATGAAGGCTGATAAAGTCACGCCACATGTTTCCACATACAATATTTTGATGAAAATAGAGGCCAATGAACACGATCTTGAAAATTTGATGAGGTTTTTTGATCGAATGAAACGGGTGCATGTTGAACCGAATGAAATATCTTACTGCATTTTAGCTACTGCCCATGCAGTTGCTAGGTTATACACTGCAACTGAAATGTATGTTGAGGCTGTGGAGAAATCTATGACAGGGAATAATTGGTCAACATTGGATGTCTTGCTTATATTGTATGGGTATCTTGGGAGCCGGAAGGAGCTGGAAAGGATTTGGAGTATTATTAAAGGACTTCCCTTTGTTAGATCTAAAAGTTATTTGTTAGCCATTGAAGCATTTGGTAGGATTGGAGAGTTAAACCGAGCAGAAGAGATTTGGTCAGAAATGGAATCAGTAAAAGGATTGAAATCTGTAGAGCAATTTAATTCAATGATGACCGTGTATTGCAAACATGGAGTGCTTGACAAAGCAGCTAGGTTGTACAAAAATATGAAGACAAAGGAGTGCAAACCGAATGCCATAACGTATCGACATCTTGTTCTGGGTTGCTTGAAATCTGGTAAGGCAGAGCAAGCTTTGAAGACATTAGACTTGGGCATGCGTTTTCCGGTTGACAAGAGGGTTAGAAATTCAACCCCATGGTTGGAGACAACTCTTTCAATTGCTGAGCTTTTTGCTGAAAAAGGGGATGTTGAAAATGTTGAGCGACTGTTTGAAGAATTTCATAAAGCTAAGTATTGTAGGTATACTTTTGTATATAATACCTTGATTAAGGCTTATGTAAAAGCTAAGATTTATAATCCAAATCTTTTGAGAAGGATGATTCTTGGAGGAGCAAATCCTGATGCTGAAAGTTACAGTCTTTTGAAAATTGCTGAACAGTTTCGGACCTGA

Protein sequence

>Msa0458000

MSMRNLMSIAIRAKFIETIRRTPCVNETHLSFKLFCTQTTQDQDSLCKRIEKLPKGESIASAFRSWMRDGFPVRGADVFHTINRLRKLNFNKRALEVMEWVIRERPYRPRELDYSYLVEFTTKLHGIPHGEKLFTRVPVEFQNELLYNNLVIACLDKGVVRVSLEYMKKMRELGHPISHLVFNRLIILHSSPSRRKMIHGLLTQMKADKVTPHVSTYNILMKIEANEHDLENLMRFFDRMKRVHVEPNEISYCILATAHAVARLYTATEMYVEAVEKSMTGNNWSTLDVLLILYGYLGSRKELERIWSIIKGLPFVRSKSYLLAIEAFGRIGELNRAEEIWSEMESVKGLKSVEQFNSMMTVYCKHGVLDKAARLYKNMKTKECKPNAITYRHLVLGCLKSGKAEQALKTLDLGMRFPVDKRVRNSTPWLETTLSIAELFAEKGDVENVERLFEEFHKAKYCRYTFVYNTLIKAYVKAKIYNPNLLRRMILGGANPDAESYSLLKIAEQFRT*