AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0225230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0225230 MtrunA17_Chr2g0331581 97.733 794 14 1 1 790 1 794 0.0 1613
Msa0225230 MtrunA17_Chr8g0350321 43.446 801 373 15 34 788 43 809 0.0 643
Msa0225230 MtrunA17_Chr2g0322731 44.382 712 353 10 106 788 71 768 0.0 625
Msa0225230 MtrunA17_Chr4g0024351 42.933 750 376 13 66 788 8 732 0.0 619
Msa0225230 MtrunA17_Chr7g0246631 43.697 714 352 12 116 788 73 777 0.0 617
Msa0225230 MtrunA17_Chr1g0203671 42.593 702 349 13 133 785 93 789 0.0 577
Msa0225230 MtrunA17_Chr6g0481041 40.225 711 357 12 133 787 27 725 0.0 561
Msa0225230 MtrunA17_Chr5g0410711 37.516 781 400 16 82 785 9 778 2.30e-169 508
Msa0225230 MtrunA17_Chr6g0472471 38.482 751 377 13 95 785 40 765 4.60e-166 499
Msa0225230 MtrunA17_Chr5g0394111 38.484 673 351 13 126 785 24 646 7.68e-153 461
Msa0225230 MtrunA17_Chr7g0224451 37.924 472 249 10 122 583 2 439 1.39e-105 331
Msa0225230 MtrunA17_Chr2g0292731 32.510 526 334 9 277 785 27 548 1.09e-85 282
Msa0225230 MtrunA17_Chr2g0292741 31.992 522 331 10 276 785 26 535 7.75e-81 269
Msa0225230 MtrunA17_Chr7g0224481 37.912 364 192 7 122 477 2 339 1.35e-72 240
Msa0225230 MtrunA17_Chr2g0292761 30.906 563 323 18 244 785 23 540 1.16e-68 236
Msa0225230 MtrunA17_Chr7g0224491 38.050 318 160 10 482 787 3 295 1.71e-64 217
Msa0225230 MtrunA17_Chr2g0319671 32.157 255 134 5 301 523 16 263 6.52e-34 132
Msa0225230 MtrunA17_Chr5g0419821 45.161 124 65 2 135 257 33 154 9.94e-26 104
Msa0225230 MtrunA17_Chr2g0319691 35.625 160 96 4 417 576 1 153 1.68e-25 103
Msa0225230 MtrunA17_Chr2g0319701 30.222 225 146 6 566 785 5 223 4.77e-25 104
Msa0225230 MtrunA17_Chr2g0326731 24.808 520 308 17 138 636 23 480 1.83e-24 109
Msa0225230 MtrunA17_Chr2g0319681 28.251 223 155 4 566 785 5 225 1.90e-24 103
Msa0225230 MtrunA17_Chr3g0140351 21.245 739 420 25 125 779 7 667 1.17e-22 103
Msa0225230 MtrunA17_Chr4g0028991 23.119 545 316 18 122 636 12 483 9.31e-22 101
Msa0225230 MtrunA17_Chr8g0340411 22.159 528 315 17 138 636 15 475 5.15e-21 98.6
Msa0225230 MtrunA17_Chr2g0331131 21.852 540 328 19 124 636 5 477 5.79e-21 98.6
Msa0225230 MtrunA17_Chr7g0224461 41.129 124 56 4 673 787 1 116 1.34e-18 82.4
Msa0225230 MtrunA17_Chr2g0304191 26.667 135 99 0 311 445 1 135 2.22e-14 70.9
Msa0225230 MtrunA17_Chr1g0205981 31.977 172 93 6 194 345 5 172 4.28e-14 72.0
Msa0225230 MtrunA17_Chr7g0265521 41.176 102 55 1 121 222 51 147 8.01e-14 72.0
Msa0225230 MtrunA17_Chr7g0224431 24.540 163 81 2 326 488 1 121 2.69e-12 64.3
Msa0225230 MtrunA17_Chr1g0175651 36.842 114 68 1 107 220 127 236 4.97e-12 67.8
Msa0225230 MtrunA17_Chr4g0055851 32.704 159 96 4 72 220 45 202 2.90e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0225230 AT1G79840.1 62.661 774 256 10 21 789 1 746 0.0 965
Msa0225230 AT1G79840.2 62.661 774 256 10 21 789 30 775 0.0 961
Msa0225230 AT1G79840.3 64.865 703 227 7 92 789 1 688 0.0 928
Msa0225230 AT1G79840.6 64.865 703 227 7 92 789 1 688 0.0 928
Msa0225230 AT1G79840.4 62.712 649 209 10 21 664 1 621 0.0 803
Msa0225230 AT4G04890.2 43.315 718 364 10 106 790 33 740 0.0 623
Msa0225230 AT4G04890.1 43.315 718 364 10 106 790 33 740 0.0 623
Msa0225230 AT4G00730.1 44.290 718 355 13 106 788 94 801 0.0 613
Msa0225230 AT4G21750.2 43.198 713 346 9 128 788 55 760 0.0 612
Msa0225230 AT4G21750.1 43.198 713 346 9 128 788 55 760 0.0 612
Msa0225230 AT4G21750.3 43.198 713 346 9 128 788 55 760 0.0 612
Msa0225230 AT4G21750.4 43.198 713 346 9 128 788 55 760 0.0 612
Msa0225230 AT1G79840.5 60.566 530 176 10 21 545 1 502 0.0 612
Msa0225230 AT1G05230.3 43.140 707 354 9 106 788 35 717 0.0 607
Msa0225230 AT1G05230.8 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.4 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.9 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.10 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.7 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.11 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.2 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.6 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.5 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT1G05230.1 43.018 709 354 9 106 788 35 719 0.0 606
Msa0225230 AT3G61150.1 42.547 738 341 12 114 788 89 806 0.0 597
Msa0225230 AT1G05230.12 43.154 577 297 6 106 663 35 599 1.52e-167 498
Msa0225230 AT5G52170.3 40.955 691 359 13 106 785 26 678 2.92e-167 499
Msa0225230 AT5G52170.1 40.955 691 359 13 106 785 26 678 2.92e-167 499
Msa0225230 AT5G52170.2 40.666 691 366 11 106 785 26 683 7.59e-166 496
Msa0225230 AT1G73360.1 39.714 700 359 18 134 786 31 714 6.01e-165 495
Msa0225230 AT1G17920.2 38.802 701 373 14 120 787 6 683 2.68e-163 489
Msa0225230 AT1G17920.1 38.802 701 373 14 120 787 6 683 2.68e-163 489
Msa0225230 AT2G32370.1 40.000 695 365 14 121 788 54 723 3.53e-161 485
Msa0225230 AT5G46880.3 36.130 739 391 18 111 785 85 806 2.32e-148 455
Msa0225230 AT5G46880.1 36.130 739 391 18 111 785 85 806 2.32e-148 455
Msa0225230 AT5G46880.2 36.130 739 391 18 111 785 85 806 2.32e-148 455
Msa0225230 AT4G17710.1 37.801 664 352 16 135 785 88 703 8.92e-134 414
Msa0225230 AT5G17320.1 32.787 732 414 17 116 788 6 718 2.55e-126 395
Msa0225230 AT3G03260.1 33.241 722 405 18 120 789 2 698 2.04e-124 389
Msa0225230 AT4G00730.2 42.585 472 231 9 106 544 94 558 1.11e-120 375
Msa0225230 AT4G25530.1 32.855 697 424 15 107 788 18 685 2.58e-118 373
Msa0225230 AT1G34650.1 32.670 704 401 18 141 788 22 708 7.66e-107 343
Msa0225230 AT3G03260.2 32.305 551 324 13 120 635 2 538 3.15e-90 294
Msa0225230 AT5G07260.2 20.632 538 371 15 201 733 10 496 1.90e-28 121
Msa0225230 AT5G07260.1 20.664 542 371 16 201 733 10 501 3.03e-28 120
Msa0225230 AT4G32880.1 21.165 704 412 27 125 752 2 638 1.89e-24 110
Msa0225230 AT5G60690.1 23.062 529 298 21 138 636 25 474 5.13e-21 99.4
Msa0225230 AT1G30490.1 22.409 656 383 26 126 720 9 599 9.54e-21 98.2
Msa0225230 AT2G34710.1 21.265 743 421 29 128 785 15 678 3.35e-18 90.1
Msa0225230 AT4G26920.1 27.179 195 124 6 289 478 47 228 1.24e-14 77.8
Msa0225230 AT3G60390.1 39.623 106 58 2 118 222 146 246 1.45e-11 67.0
Msa0225230 AT4G16780.1 36.752 117 62 2 110 220 101 211 3.38e-11 65.5

Find 180 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAGACTCCATTGTTAATT+TGG 0.153641 2_1:-75357202 None:intergenic
CTCCAAGGCAAGTCAAATTT+TGG 0.154977 2_1:+75352442 Msa0225230:CDS
GTCAACAGTGGCCTAGCTTT+TGG 0.171217 2_1:+75356125 Msa0225230:CDS
TGATTTGGGTACGACGATTT+TGG 0.178481 2_1:-75352467 None:intergenic
AGGATCATTCAAGTTCTTTC+TGG 0.202053 2_1:-75356491 None:intergenic
TTGGCTTTAAATAGGTAGTA+TGG 0.217597 2_1:+75356048 Msa0225230:intron
TTCAAATTCATCCATTGATT+TGG 0.230510 2_1:-75351156 None:intergenic
GAGAAGCATTTGTAAGGATT+TGG 0.247426 2_1:-75357173 None:intergenic
ATTTAAATAATACCTTGATT+TGG 0.259779 2_1:-75352482 None:intergenic
GGGGCAACAAGCCTTATTTA+TGG 0.261801 2_1:-75352681 None:intergenic
CGGCATGGCGGTGCGGCAGC+GGG 0.264830 2_1:+75351017 Msa0225230:CDS
AGAGAATATTAAAAGCTCTT+TGG 0.271894 2_1:+75353580 Msa0225230:CDS
TTCAATTGTTTCTGATGGTT+TGG 0.287727 2_1:+75357074 Msa0225230:CDS
GTTTCCATGTTTAATATCTA+AGG 0.290461 2_1:+75354042 Msa0225230:CDS
GTTGTCTTCTACTTTGTCTA+TGG 0.298498 2_1:-75355778 None:intergenic
GGGGAGGAAGGGAGTACAAT+AGG 0.308975 2_1:+75351083 Msa0225230:CDS
GAGAGGCTGAGAGCAGCTTT+AGG 0.319197 2_1:+75353506 Msa0225230:CDS
GAAGCTTCAATGGATCTCTT+TGG 0.328107 2_1:-75353797 None:intergenic
TTTGTGCAGTTTCTTCTATA+TGG 0.329813 2_1:+75356536 Msa0225230:CDS
TTTAAATAATACCTTGATTT+GGG 0.331757 2_1:-75352481 None:intergenic
CATAACCTCAGCTTTGAGTT+TGG 0.338433 2_1:-75352777 None:intergenic
GTGGTGGGGACCCCACAGTT+GGG 0.352837 2_1:-75352701 None:intergenic
CTCACCAGTTGAATCCTTCA+TGG 0.359314 2_1:-75356219 None:intergenic
TCCATTGATTTGGATTTAGT+TGG 0.361488 2_1:-75351146 None:intergenic
ATTGCCTCTGTCTTGTCCTT+TGG 0.362072 2_1:-75356767 None:intergenic
GGTAGTATGGGTGGAGCATT+TGG 0.373488 2_1:+75356061 Msa0225230:intron
GAAATTAGCAGCGAGTATTC+AGG 0.374487 2_1:+75351122 Msa0225230:CDS
TGGAGAGGGAAAGAAGTCTT+TGG 0.377024 2_1:-75350555 None:intergenic
TCGGCATGGCGGTGCGGCAG+CGG 0.378004 2_1:+75351016 Msa0225230:CDS
TAACTATGGAGAGAGTGTTT+TGG 0.379076 2_1:-75350392 None:intergenic
GAGGTGGAAGAAGGGGAGGA+AGG 0.380425 2_1:+75351071 Msa0225230:CDS
TGTGGTGGGGACCCCACAGT+TGG 0.383545 2_1:-75352702 None:intergenic
CCTACGAGAGACCATAAATA+AGG 0.385213 2_1:+75352670 Msa0225230:CDS
ATAAGAACAAGAAGAAGAAA+AGG 0.391486 2_1:+75351237 Msa0225230:CDS
AACCAAAATTTGACTTGCCT+TGG 0.392620 2_1:-75352444 None:intergenic
CATTGCACCATCTCTGTTTG+TGG 0.393009 2_1:-75352720 None:intergenic
AACAAAACATTCGGAGATAT+AGG 0.395045 2_1:-75356562 None:intergenic
ACTAAGGTTACTAGTAAAAC+TGG 0.395797 2_1:+75356448 Msa0225230:CDS
CAAGAATGGTGCAGTGCAAC+TGG 0.400659 2_1:+75354105 Msa0225230:CDS
AGTAATATGGAGGTGGAAGA+AGG 0.401643 2_1:+75351062 Msa0225230:CDS
GCATGGCGGTGCGGCAGCGG+GGG 0.412855 2_1:+75351019 Msa0225230:CDS
CAACAACTTAGCAAGCAATT+AGG 0.414776 2_1:+75352414 Msa0225230:CDS
AGAGGCTGAGAGCAGCTTTA+GGG 0.415023 2_1:+75353507 Msa0225230:CDS
TCTTTGGCTTTAGAAGTAGA+AGG 0.415922 2_1:-75350539 None:intergenic
ACAAAATACACTTCTCTAGT+TGG 0.422278 2_1:-75355705 None:intergenic
TTATAAGCTCCTCCATTGCT+TGG 0.425119 2_1:-75353658 None:intergenic
TGAAAATCCTGAGGGCAGTA+TGG 0.428055 2_1:-75357055 None:intergenic
AATCAGAAATAGAGAAACTA+AGG 0.429794 2_1:+75352633 Msa0225230:CDS
AGGTGGAAGAAGGGGAGGAA+GGG 0.430407 2_1:+75351072 Msa0225230:CDS
TGTATCTCTTGAAGCTTCAA+TGG 0.438168 2_1:-75353807 None:intergenic
TGGATCTCTTTGGTCTTCCA+TGG 0.443218 2_1:-75353787 None:intergenic
CTGTAGGAGAAGCATTTGTA+AGG 0.443396 2_1:-75357179 None:intergenic
TTAGGTGTTGCCACATTGGC+TGG 0.448272 2_1:+75356343 Msa0225230:intron
AGCAATGGTTGTGTCATTTG+AGG 0.449743 2_1:-75350437 None:intergenic
ATTGAAGCTTCAAGAGATAC+AGG 0.451772 2_1:+75353809 Msa0225230:CDS
CCCATCTGGTTGCATTATTG+AGG 0.452497 2_1:+75355833 Msa0225230:CDS
GTAATATGGAGGTGGAAGAA+GGG 0.456514 2_1:+75351063 Msa0225230:CDS
TACGCACCTGTGGATATTAC+CGG 0.457137 2_1:+75356991 Msa0225230:CDS
TCTTGATGAGTCAAGAATAA+TGG 0.457181 2_1:+75353625 Msa0225230:CDS
TGGTGGGGACCCCACAGTTG+GGG 0.457773 2_1:-75352700 None:intergenic
ACAAGTCTAAATTGTGAAGA+TGG 0.459079 2_1:+75357270 Msa0225230:CDS
TCCAACTAAATCCAAATCAA+TGG 0.462181 2_1:+75351145 Msa0225230:CDS
TTTCTGATGGTTTGGAGTCA+AGG 0.463190 2_1:+75357082 Msa0225230:CDS
GTGCATCAAGCTTCCATACA+TGG 0.464344 2_1:+75356425 Msa0225230:CDS
GCTTTAGGGAAATATGCATC+AGG 0.464608 2_1:+75353521 Msa0225230:CDS
GACGTTCGCATTGAAGTTGA+AGG 0.466117 2_1:-75356169 None:intergenic
AAATGCAGAAAACGCCCATC+TGG 0.466193 2_1:+75355819 Msa0225230:CDS
TGCTATGTTTGCAGAATCAA+TGG 0.466472 2_1:+75354011 Msa0225230:intron
TCCTTTGGCTAAATTTGCAA+TGG 0.466744 2_1:-75356752 None:intergenic
TAGTAACCTTAGTCCATGTA+TGG 0.466982 2_1:-75356438 None:intergenic
AAGAAATCAAACAAAACATT+CGG 0.470977 2_1:-75356571 None:intergenic
CACAAATTCTTACGAATCAA+TGG 0.474074 2_1:+75356963 Msa0225230:CDS
GCTAAGAGAGAGAGCTGGAG+AGG 0.488674 2_1:-75350570 None:intergenic
TAATATGGAGGTGGAAGAAG+GGG 0.489966 2_1:+75351064 Msa0225230:CDS
CTTATTTATGGTCTCTCGTA+GGG 0.492068 2_1:-75352669 None:intergenic
ACTTCTCTAGTTGGAACCAT+TGG 0.492214 2_1:-75355696 None:intergenic
AATGATCCTAGTGAACCTCT+TGG 0.492403 2_1:+75356505 Msa0225230:CDS
GTAAAACTGGAGAAGACATA+AGG 0.495014 2_1:+75356461 Msa0225230:CDS
ATTATTGAGGATAAGTCAAA+TGG 0.496385 2_1:+75355846 Msa0225230:CDS
TGGCTTTAAATAGGTAGTAT+GGG 0.500533 2_1:+75356049 Msa0225230:intron
AGGCTTGTTGCCCCAACTGT+GGG 0.503595 2_1:+75352690 Msa0225230:CDS
CTTATAAAGATGGCAACAAT+GGG 0.505105 2_1:+75353674 Msa0225230:CDS
GGCATGGCGGTGCGGCAGCG+GGG 0.506807 2_1:+75351018 Msa0225230:CDS
TTGTGTAAGATACATAACTA+TGG 0.507893 2_1:-75350406 None:intergenic
CAGTGGGATATAATGTCTAA+TGG 0.509556 2_1:+75356715 Msa0225230:intron
GGTATTCAATCCGTGATGAC+CGG 0.513881 2_1:+75357012 Msa0225230:CDS
CCTTATTTATGGTCTCTCGT+AGG 0.514357 2_1:-75352670 None:intergenic
GCACCATCTCTGTTTGTGGT+GGG 0.514855 2_1:-75352716 None:intergenic
AAATCAATGGATGAATTTGA+AGG 0.515118 2_1:+75351158 Msa0225230:CDS
AATCAAAAGAAAACAATATG+TGG 0.518388 2_1:+75356923 Msa0225230:CDS
TGCACCATCTCTGTTTGTGG+TGG 0.525119 2_1:-75352717 None:intergenic
TCCTCAATAATGCAACCAGA+TGG 0.528035 2_1:-75355834 None:intergenic
TGGTTTGGAGTCAAGGCAAA+TGG 0.529541 2_1:+75357089 Msa0225230:CDS
GTTCCCATGAAGGATTCAAC+TGG 0.531129 2_1:+75356215 Msa0225230:CDS
AAATCGTCGTACCCAAATCA+AGG 0.531425 2_1:+75352470 Msa0225230:CDS
CACCATCTCTGTTTGTGGTG+GGG 0.533160 2_1:-75352715 None:intergenic
AAGCTTCCATACATGGACTA+AGG 0.539054 2_1:+75356432 Msa0225230:CDS
GCTTATAAAGATGGCAACAA+TGG 0.540324 2_1:+75353673 Msa0225230:CDS
GGAGAAGGTTCTAACAAGAA+TGG 0.540967 2_1:+75354091 Msa0225230:CDS
GTTGCAAATGTTAACACCAA+TGG 0.544408 2_1:+75355680 Msa0225230:CDS
ATAGTTAAGTATTTCACGAC+CGG 0.544434 2_1:-75353726 None:intergenic
TCCATTGTTAATTTGGCTGT+AGG 0.545967 2_1:-75357195 None:intergenic
GGCAACAAACGTTCCCATGA+AGG 0.546780 2_1:+75356205 Msa0225230:CDS
AATGCCTTGCCCCAAAAGCT+AGG 0.549012 2_1:-75356136 None:intergenic
TCCATTGCAAATTTAGCCAA+AGG 0.550629 2_1:+75356751 Msa0225230:CDS
CGAATCACATCCGGTCATCA+CGG 0.551333 2_1:-75357022 None:intergenic
TAGATTGCTCGAATCACATC+CGG 0.551516 2_1:-75357031 None:intergenic
AATGGAGGAGCTTATAAAGA+TGG 0.553738 2_1:+75353664 Msa0225230:CDS
ATTCTCTTGGTCATGACTAG+TGG 0.554085 2_1:-75353564 None:intergenic
AGCAATTAGGTCTTGCTCCA+AGG 0.554546 2_1:+75352427 Msa0225230:CDS
TAACTATGATGAATATATGA+AGG 0.554639 2_1:+75353742 Msa0225230:CDS
TCACCAGTTGAATCCTTCAT+GGG 0.555142 2_1:-75356218 None:intergenic
GGGATATAATGTCTAATGGT+GGG 0.556948 2_1:+75356719 Msa0225230:CDS
GAGGAACTTGAAGATGATGA+AGG 0.558342 2_1:+75351182 Msa0225230:CDS
GGCAAATGGTAATTACTTCG+AGG 0.560541 2_1:+75357103 Msa0225230:CDS
AATCTAGCCATACTGCCCTC+AGG 0.562964 2_1:+75357048 Msa0225230:CDS
CGAGGATAGAGACGTAGGTG+AGG 0.563663 2_1:-75350339 None:intergenic
GAGGAAGGGAGTACAATAGG+AGG 0.565183 2_1:+75351086 Msa0225230:CDS
TGAATACCGGTAATATCCAC+AGG 0.566945 2_1:-75356997 None:intergenic
TATGGAGGTGGAAGAAGGGG+AGG 0.567505 2_1:+75351067 Msa0225230:CDS
AGAAAAGGAAGAAATATCAC+AGG 0.572043 2_1:+75351252 Msa0225230:CDS
AATGGTAATTACTTCGAGGC+GGG 0.572459 2_1:+75357107 Msa0225230:CDS
AATGGATGAATTTGAAGGAG+AGG 0.574452 2_1:+75351163 Msa0225230:CDS
GGTCATCACGGATTGAATAC+CGG 0.575578 2_1:-75357010 None:intergenic
CCTCAATAATGCAACCAGAT+GGG 0.578551 2_1:-75355833 None:intergenic
GGATGTAGTAAACCAAGCAA+TGG 0.580722 2_1:+75353646 Msa0225230:CDS
CTAAGAGAGAGAGCTGGAGA+GGG 0.582499 2_1:-75350569 None:intergenic
TTCTGAACAGATCAGAGTCA+TGG 0.585454 2_1:+75351280 Msa0225230:CDS
ATTGTTAGGTGTTGCCACAT+TGG 0.587255 2_1:+75356339 Msa0225230:intron
ATCAGAAATAGAGAAACTAA+GGG 0.588729 2_1:+75352634 Msa0225230:CDS
TGGGATATAATGTCTAATGG+TGG 0.590022 2_1:+75356718 Msa0225230:CDS
ACAAGGCTAAGAGAGAGAGC+TGG 0.592876 2_1:-75350575 None:intergenic
AAGGCTTGTTGCCCCAACTG+TGG 0.593522 2_1:+75352689 Msa0225230:CDS
TCCTACAGCCAAATTAACAA+TGG 0.597793 2_1:+75357194 Msa0225230:CDS
GCCGTTGAAAATTCAGACCA+TGG 0.602698 2_1:+75353770 Msa0225230:CDS
TACAATAGGAGGTGAGCGTG+TGG 0.603598 2_1:+75351097 Msa0225230:CDS
TTACAGCATCAAGAAAACAT+TGG 0.605442 2_1:-75353862 None:intergenic
TAATACATGTGTAGGTAGAG+AGG 0.607160 2_1:+75353489 Msa0225230:intron
GACACTATATGCAAAGGAGA+AGG 0.607999 2_1:+75354076 Msa0225230:CDS
TGTAGTAAACCAAGCAATGG+AGG 0.608774 2_1:+75353649 Msa0225230:CDS
AGAAAACATTGGACGATCCG+AGG 0.612026 2_1:-75353851 None:intergenic
AGCTAGGCCACTGTTGACAA+TGG 0.614429 2_1:-75356120 None:intergenic
GAGGATAGAGACGTAGGTGA+GGG 0.614728 2_1:-75350338 None:intergenic
GATGAAGGTGAAGATGATGA+AGG 0.621690 2_1:+75351197 Msa0225230:CDS
AGAAACAATTGAAAATCCTG+AGG 0.621946 2_1:-75357064 None:intergenic
CACAAACAGAGATGGTGCAA+TGG 0.622132 2_1:+75352721 Msa0225230:CDS
GGCTTGTTGCCCCAACTGTG+GGG 0.622702 2_1:+75352691 Msa0225230:CDS
GGACGAAACTCGTCGAACTG+AGG 0.623994 2_1:+75356597 Msa0225230:CDS
CAAATTAACAATGGAGTCTG+TGG 0.624759 2_1:+75357203 Msa0225230:CDS
GAAACAATTGAAAATCCTGA+GGG 0.625241 2_1:-75357063 None:intergenic
ACGTTCGCATTGAAGTTGAA+GGG 0.628268 2_1:-75356168 None:intergenic
GTCCCCACCACAAACAGAGA+TGG 0.629482 2_1:+75352713 Msa0225230:CDS
ATCAATCCAAGAGGTTCACT+AGG 0.631634 2_1:-75356511 None:intergenic
AATAGGAGGTGAGCGTGTGG+AGG 0.632405 2_1:+75351100 Msa0225230:CDS
ACAGTTGACACTATATGCAA+AGG 0.638611 2_1:+75354070 Msa0225230:CDS
TGGTTACGTAGCTTAGAGAC+CGG 0.638972 2_1:+75353707 Msa0225230:CDS
ATGTTTGCAGAATCAATGGA+AGG 0.640926 2_1:+75354015 Msa0225230:intron
AAATGCCAAACTCAAAGCTG+AGG 0.643784 2_1:+75352772 Msa0225230:CDS
TTGGCTTTAGAAGTAGAAGG+AGG 0.644576 2_1:-75350536 None:intergenic
CTTTAAATAGGTAGTATGGG+TGG 0.647600 2_1:+75356052 Msa0225230:intron
AGGATAGAGACGTAGGTGAG+GGG 0.648817 2_1:-75350337 None:intergenic
GCTGCCTTAGATATTAAACA+TGG 0.649260 2_1:-75354046 None:intergenic
GCACAAACTATCAATCCAAG+AGG 0.652201 2_1:-75356520 None:intergenic
CACATCCTGATGAAAAGCAG+AGG 0.653751 2_1:+75352391 Msa0225230:CDS
GATGATGAAGGTGATGGTGA+TGG 0.658053 2_1:+75351209 Msa0225230:CDS
TCTAAGCTACGTAACCACAT+TGG 0.660378 2_1:-75353701 None:intergenic
AAATGGTAATTACTTCGAGG+CGG 0.664685 2_1:+75357106 Msa0225230:CDS
GGTGAAGATGATGAAGGTGA+TGG 0.672812 2_1:+75351203 Msa0225230:CDS
CTTTAGGGAAATATGCATCA+GGG 0.674316 2_1:+75353522 Msa0225230:CDS
AATGGTGGTATACGCACCTG+TGG 0.675541 2_1:+75356981 Msa0225230:CDS
AGTTGGCACAAAGAATGACA+TGG 0.675595 2_1:+75356383 Msa0225230:CDS
AGAAACGAGGATAGAGACGT+AGG 0.679306 2_1:-75350344 None:intergenic
TATCGCACCATTGTCAACAG+TGG 0.688962 2_1:+75356113 Msa0225230:CDS
AAATTCTTACGAATCAATGG+TGG 0.698012 2_1:+75356966 Msa0225230:CDS
AGATACTGCAAGCAGTTGAG+TGG 0.698583 2_1:+75355729 Msa0225230:CDS
CAACAATGGGTGAACCAATG+TGG 0.720119 2_1:+75353687 Msa0225230:CDS
TCATGACTAGTGGAACATGA+AGG 0.724034 2_1:-75353554 None:intergenic
TTAGCCAAAGGACAAGACAG+AGG 0.726395 2_1:+75356763 Msa0225230:CDS
GGTAAGTAAATGAAGAAACG+AGG 0.727875 2_1:-75350357 None:intergenic
TCTGCACACATTGACAACGT+TGG 0.738320 2_1:-75350497 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATCATATTACTAATTTAAA+AGG + chr2_1:75351536-75351555 Msa0225230:intron 10.0%
!! AATATAACTATATTAATCAA+AGG - chr2_1:75351710-75351729 None:intergenic 10.0%
!! AAAAAAAAAAATTACATGAA+TGG + chr2_1:75352334-75352353 Msa0225230:intron 10.0%
!!! TAAATTAATGAATTTCTTTT+AGG + chr2_1:75354186-75354205 Msa0225230:intron 10.0%
!!! TTTTGATATTATTTTTATGA+AGG + chr2_1:75356009-75356028 Msa0225230:intron 10.0%
!!! AATTTTAAAAGAAAACTCAT+AGG - chr2_1:75350906-75350925 None:intergenic 15.0%
!! TTAAAAATTAGTTCATTAGA+TGG - chr2_1:75350940-75350959 None:intergenic 15.0%
!!! TAATGAACTAATTTTTAAGT+TGG + chr2_1:75350942-75350961 Msa0225230:intron 15.0%
!! TATTATAAAATGTAATCACA+TGG - chr2_1:75351863-75351882 None:intergenic 15.0%
!! GAAAATAAGTTAACTTAATT+TGG + chr2_1:75351997-75352016 Msa0225230:intron 15.0%
!! AATTAAAAATGTAATCAACT+AGG + chr2_1:75352077-75352096 Msa0225230:intron 15.0%
!! ATTAAAAATGTAATCAACTA+GGG + chr2_1:75352078-75352097 Msa0225230:intron 15.0%
!! TTTAAATAATACCTTGATTT+GGG - chr2_1:75352484-75352503 None:intergenic 15.0%
!! ATTTAAATAATACCTTGATT+TGG - chr2_1:75352485-75352504 None:intergenic 15.0%
!!! CAAAATATCTTTTAAAAATG+AGG + chr2_1:75352969-75352988 Msa0225230:intron 15.0%
!!! GAAAAATAATGAATTTTCAT+TGG + chr2_1:75352999-75353018 Msa0225230:intron 15.0%
!! AAATGGAATATATTAATCAA+TGG - chr2_1:75353315-75353334 None:intergenic 15.0%
!! AAGAAATTCATTAATTTAGT+AGG - chr2_1:75354184-75354203 None:intergenic 15.0%
!! TTCATTAACTAATTAATAGT+TGG - chr2_1:75354436-75354455 None:intergenic 15.0%
!! GCAATTTAAATTAAAATTCT+AGG + chr2_1:75355395-75355414 Msa0225230:intron 15.0%
!!! TTTAACCTTAATTTTGTATT+TGG + chr2_1:75355637-75355656 Msa0225230:intron 15.0%
!! TAAAGAAAACAAAATCATAT+AGG - chr2_1:75355942-75355961 None:intergenic 15.0%
!! TAAGAATTATCATAAGAAAA+AGG + chr2_1:75356247-75356266 Msa0225230:intron 15.0%
!! TTGAATCAGTATATTAAAAT+CGG - chr2_1:75356625-75356644 None:intergenic 15.0%
!!! TATTTTGTATATGAATTTAG+AGG + chr2_1:75356662-75356681 Msa0225230:intron 15.0%
!!! ATTTTGTATATGAATTTAGA+GGG + chr2_1:75356663-75356682 Msa0225230:intron 15.0%
!! GAATATAAAAACAAAAGTGA+AGG - chr2_1:75350303-75350322 None:intergenic 20.0%
!! AAAAACAAAAATTTGACTAG+AGG - chr2_1:75350717-75350736 None:intergenic 20.0%
!! TGAAGAAAAAGAAATTTCAT+TGG - chr2_1:75351821-75351840 None:intergenic 20.0%
!!! CTTAATTTGGATTGAAAATT+TGG + chr2_1:75352010-75352029 Msa0225230:intron 20.0%
!! TATACTACAATCTTATCAAT+AGG - chr2_1:75352206-75352225 None:intergenic 20.0%
!! TTGTAGTATATTTATTGAAG+AGG + chr2_1:75352216-75352235 Msa0225230:intron 20.0%
!!! CTTTTAAAAATGAGGTAATA+CGG + chr2_1:75352977-75352996 Msa0225230:intron 20.0%
!!! TAAAGTACTAGCTAAAAAAA+TGG - chr2_1:75353332-75353351 None:intergenic 20.0%
!!! GATTTTTATACTGGAATTTT+TGG + chr2_1:75353602-75353621 Msa0225230:CDS 20.0%
!! TAACTATGATGAATATATGA+AGG + chr2_1:75353742-75353761 Msa0225230:CDS 20.0%
!! ATGCAATGATATTATTCATA+TGG - chr2_1:75353931-75353950 None:intergenic 20.0%
!! TTAAACTTCTACAAAACAAA+AGG - chr2_1:75353975-75353994 None:intergenic 20.0%
!! ATCTTTGATATTGAATTAGA+TGG + chr2_1:75354157-75354176 Msa0225230:intron 20.0%
!! TCTTTGATATTGAATTAGAT+GGG + chr2_1:75354158-75354177 Msa0225230:intron 20.0%
!!! GAGTAATTTTTAAGAATTGT+AGG - chr2_1:75354227-75354246 None:intergenic 20.0%
!!! TTCATAATGTCTTTTTTGAT+AGG - chr2_1:75354396-75354415 None:intergenic 20.0%
!! TTTCATAAAACCTTATATGT+AGG + chr2_1:75354459-75354478 Msa0225230:intron 20.0%
!!! AGAATAGAATTTTCAAACAT+AGG - chr2_1:75354703-75354722 None:intergenic 20.0%
!!! TAATGTTGTAAATGTTTTAG+TGG + chr2_1:75354722-75354741 Msa0225230:intron 20.0%
!!! AAAAAAGATTAAGTTGATTG+TGG + chr2_1:75354749-75354768 Msa0225230:intron 20.0%
!!! ATATGCTTTTGATTATAGTA+TGG + chr2_1:75354779-75354798 Msa0225230:intron 20.0%
!! TTTAAACTTTAGTAACACTT+TGG + chr2_1:75354913-75354932 Msa0225230:intron 20.0%
!!! CAGTTTTATAAAGTTGATTT+AGG + chr2_1:75355256-75355275 Msa0225230:intron 20.0%
!! TATCTATATCTATGGATATA+TGG + chr2_1:75355317-75355336 Msa0225230:intron 20.0%
!!! AGGATTAAATAAAAGTACTT+TGG + chr2_1:75355415-75355434 Msa0225230:intron 20.0%
!! ACAACTATACATATAAAATG+AGG + chr2_1:75355458-75355477 Msa0225230:intron 20.0%
!! CATACATTATGTAACAAAAA+TGG - chr2_1:75355905-75355924 None:intergenic 20.0%
!!! CATTTTTGTTACATAATGTA+TGG + chr2_1:75355903-75355922 Msa0225230:intron 20.0%
!! AAGAAATCAAACAAAACATT+CGG - chr2_1:75356574-75356593 None:intergenic 20.0%
!! ATTCATATACAAAATATCTC+AGG - chr2_1:75356658-75356677 None:intergenic 20.0%
!!! TTTTGTATATGAATTTAGAG+GGG + chr2_1:75356664-75356683 Msa0225230:intron 20.0%
!!! TAACTTCTAAGAAAAATAAG+AGG + chr2_1:75356871-75356890 Msa0225230:intron 20.0%
!! AATCAAAAGAAAACAATATG+TGG + chr2_1:75356923-75356942 Msa0225230:CDS 20.0%
! TTGTGTAAGATACATAACTA+TGG - chr2_1:75350409-75350428 None:intergenic 25.0%
!!! TTTTTTTCTTTGCTCTAATC+AGG + chr2_1:75350983-75351002 Msa0225230:intron 25.0%
!! TTCAAATTCATCCATTGATT+TGG - chr2_1:75351159-75351178 None:intergenic 25.0%
! AAATCAATGGATGAATTTGA+AGG + chr2_1:75351158-75351177 Msa0225230:CDS 25.0%
! ATAAGAACAAGAAGAAGAAA+AGG + chr2_1:75351237-75351256 Msa0225230:CDS 25.0%
! AATTGTCATCCAAACAAAAT+AGG - chr2_1:75351360-75351379 None:intergenic 25.0%
! GATATGTAGTACTATTATGA+AGG - chr2_1:75351391-75351410 None:intergenic 25.0%
!!! TTAATCAAAGGTATCTCTTA+AGG - chr2_1:75351698-75351717 None:intergenic 25.0%
! AGCATGTATTATTATTGGTA+AGG + chr2_1:75352117-75352136 Msa0225230:intron 25.0%
! AAAACAAACAACTAATCAAG+TGG - chr2_1:75352175-75352194 None:intergenic 25.0%
! CATTATTAAACACCATTTGT+TGG + chr2_1:75352254-75352273 Msa0225230:intron 25.0%
! TTCAATTCTTATATGTAGAG+TGG - chr2_1:75352281-75352300 None:intergenic 25.0%
! AATGGTGAATGTAATATTGT+AGG + chr2_1:75352352-75352371 Msa0225230:intron 25.0%
! AATCAGAAATAGAGAAACTA+AGG + chr2_1:75352633-75352652 Msa0225230:CDS 25.0%
! ATCAGAAATAGAGAAACTAA+GGG + chr2_1:75352634-75352653 Msa0225230:CDS 25.0%
!!! TTGGTGTAGAATAGTTTTAA+AGG - chr2_1:75353060-75353079 None:intergenic 25.0%
! CAAAATTAGATATGCATTGT+TGG - chr2_1:75353079-75353098 None:intergenic 25.0%
!!! ATAGATTTATTTTGTTGCAC+TGG + chr2_1:75353102-75353121 Msa0225230:intron 25.0%
!! AAGAGCTTTTAATATTCTCT+TGG - chr2_1:75353580-75353599 None:intergenic 25.0%
! AGAGAATATTAAAAGCTCTT+TGG + chr2_1:75353580-75353599 Msa0225230:CDS 25.0%
! GATATTATTCATATGGTTCA+AGG - chr2_1:75353924-75353943 None:intergenic 25.0%
! GTTTCCATGTTTAATATCTA+AGG + chr2_1:75354042-75354061 Msa0225230:CDS 25.0%
! TCTTAAAAATTACTCTAGAC+CGG + chr2_1:75354232-75354251 Msa0225230:intron 25.0%
! TAAAACCTTATATGTAGGAA+TGG + chr2_1:75354464-75354483 Msa0225230:intron 25.0%
! ATTTACCATTCCTACATATA+AGG - chr2_1:75354472-75354491 None:intergenic 25.0%
! CATACATGGATTTATTGATA+TGG + chr2_1:75354598-75354617 Msa0225230:intron 25.0%
!!! ATCTTTCTTTTTAGAAGTGA+AGG + chr2_1:75354805-75354824 Msa0225230:intron 25.0%
! TCTGTGAAATAGATAAGTAA+AGG - chr2_1:75354851-75354870 None:intergenic 25.0%
! TATAACTTATAAGTCATGGA+GGG - chr2_1:75355207-75355226 None:intergenic 25.0%
! TTATAACTTATAAGTCATGG+AGG - chr2_1:75355208-75355227 None:intergenic 25.0%
! CACTTATAACTTATAAGTCA+TGG - chr2_1:75355211-75355230 None:intergenic 25.0%
! CATGACTTATAAGTTATAAG+TGG + chr2_1:75355209-75355228 Msa0225230:intron 25.0%
!!! TATAAAACTGACTTGTAAAG+TGG - chr2_1:75355246-75355265 None:intergenic 25.0%
!!! GATGGTTTTATATTTTGGAT+TGG - chr2_1:75355283-75355302 None:intergenic 25.0%
!!! AAGCAGATGGTTTTATATTT+TGG - chr2_1:75355288-75355307 None:intergenic 25.0%
! GTAGCATATATCTATATCTA+TGG + chr2_1:75355309-75355328 Msa0225230:intron 25.0%
!! TTTTCCAATGATAAATACTG+TGG + chr2_1:75355568-75355587 Msa0225230:intron 25.0%
! ACGTACCAAATACAAAATTA+AGG - chr2_1:75355645-75355664 None:intergenic 25.0%
! ATTATTGAGGATAAGTCAAA+TGG + chr2_1:75355846-75355865 Msa0225230:CDS 25.0%
! ATAATGTATGGAGCATAATT+TGG + chr2_1:75355915-75355934 Msa0225230:intron 25.0%
!!! AGGTTTATTGATTTTTCCTT+TGG + chr2_1:75356029-75356048 Msa0225230:intron 25.0%
!!! TTTTTCCTTTGGCTTTAAAT+AGG + chr2_1:75356040-75356059 Msa0225230:intron 25.0%
! AGTGTACAATATTTACTACT+TGG - chr2_1:75356296-75356315 None:intergenic 25.0%
! AGTGATGAAAACAAATTGTT+AGG + chr2_1:75356325-75356344 Msa0225230:intron 25.0%
!!! AAGAAAAAGCATTTTGAAGT+TGG + chr2_1:75356366-75356385 Msa0225230:CDS 25.0%
!!! ATGTTTTGTTTGATTTCTTG+AGG + chr2_1:75356575-75356594 Msa0225230:CDS 25.0%
!!! TGTTTTGTTTGATTTCTTGA+GGG + chr2_1:75356576-75356595 Msa0225230:CDS 25.0%
! ACAATAATCATTATGACAGT+GGG + chr2_1:75356699-75356718 Msa0225230:intron 25.0%
! TGAATATTGAGTAACTTACT+TGG - chr2_1:75356804-75356823 None:intergenic 25.0%
! TTGATTTAATTGTCTGCAAA+GGG - chr2_1:75356909-75356928 None:intergenic 25.0%
!! TTTGATTTAATTGTCTGCAA+AGG - chr2_1:75356910-75356929 None:intergenic 25.0%
!! TTTTTAAGGAGCAAAAGCAA+TGG - chr2_1:75350455-75350474 None:intergenic 30.0%
!!! GAAGTGTGTTGTGTTTTTTA+AGG - chr2_1:75350469-75350488 None:intergenic 30.0%
AGTTATAGTTAGGACTTACA+AGG - chr2_1:75350595-75350614 None:intergenic 30.0%
GAAGAGAGTTAGTTATAGTT+AGG - chr2_1:75350605-75350624 None:intergenic 30.0%
AGCAAATGAAACATAAAACG+AGG - chr2_1:75350789-75350808 None:intergenic 30.0%
AAGTGACACTTATGTCATTA+GGG + chr2_1:75350859-75350878 Msa0225230:intron 30.0%
TCCAACTAAATCCAAATCAA+TGG + chr2_1:75351145-75351164 Msa0225230:CDS 30.0%
!! TCCATTGATTTGGATTTAGT+TGG - chr2_1:75351149-75351168 None:intergenic 30.0%
AGAAAAGGAAGAAATATCAC+AGG + chr2_1:75351252-75351271 Msa0225230:CDS 30.0%
! AGGAAAAAAAAAGAGCATAG+TGG - chr2_1:75351326-75351345 None:intergenic 30.0%
!! TGTAACTTGTTTAAGTGCAT+AGG + chr2_1:75351778-75351797 Msa0225230:intron 30.0%
!! TGAATTAACCACAGTTTTGA+CGG + chr2_1:75352047-75352066 Msa0225230:intron 30.0%
CAGTGAGCATGTATTATTAT+TGG + chr2_1:75352112-75352131 Msa0225230:intron 30.0%
! ATTTATTGAAGAGGTGTACT+TGG + chr2_1:75352225-75352244 Msa0225230:intron 30.0%
! ACTTATGTTGCATGTTTTTC+AGG + chr2_1:75352577-75352596 Msa0225230:intron 30.0%
! TAGACTAGTTAGACAAATTG+TGG + chr2_1:75352857-75352876 Msa0225230:intron 30.0%
TAATACGACATGAGAAATTG+TGG - chr2_1:75352942-75352961 None:intergenic 30.0%
TACACATTATAGCATCTGAT+TGG - chr2_1:75353152-75353171 None:intergenic 30.0%
CTCTTGATTAATACATGTGT+AGG + chr2_1:75353481-75353500 Msa0225230:intron 30.0%
! AGCTCTTTGGATTTTTATAC+TGG + chr2_1:75353593-75353612 Msa0225230:CDS 30.0%
TCTTGATGAGTCAAGAATAA+TGG + chr2_1:75353625-75353644 Msa0225230:CDS 30.0%
CTTATAAAGATGGCAACAAT+GGG + chr2_1:75353674-75353693 Msa0225230:CDS 30.0%
ATAGTTAAGTATTTCACGAC+CGG - chr2_1:75353729-75353748 None:intergenic 30.0%
TTACAGCATCAAGAAAACAT+TGG - chr2_1:75353865-75353884 None:intergenic 30.0%
TTCGAATTTACCTATTCAGA+CGG - chr2_1:75354329-75354348 None:intergenic 30.0%
TCTGAATAGGTAAATTCGAA+CGG + chr2_1:75354329-75354348 Msa0225230:intron 30.0%
TATGTAGGAATGGTAAATTG+AGG + chr2_1:75354474-75354493 Msa0225230:intron 30.0%
! TTTCTTGCTGTAAATCTGAA+AGG + chr2_1:75354568-75354587 Msa0225230:intron 30.0%
! TTTCTTTTGCTTGTCATGTT+TGG - chr2_1:75354648-75354667 None:intergenic 30.0%
TGACAAGCAAAAGAAAATGA+TGG + chr2_1:75354652-75354671 Msa0225230:intron 30.0%
GAGATGAATTAGACAAGATA+TGG - chr2_1:75354953-75354972 None:intergenic 30.0%
TCTTGTCTAATTCATCTCAT+TGG + chr2_1:75354955-75354974 Msa0225230:intron 30.0%
TGACAAATTATGATTCCATG+CGG + chr2_1:75354994-75355013 Msa0225230:intron 30.0%
GAAGATGGAAATAGAAACAA+AGG + chr2_1:75355510-75355529 Msa0225230:intron 30.0%
AGAGCATATACTACTTAACT+TGG + chr2_1:75355597-75355616 Msa0225230:intron 30.0%
ACAAAATACACTTCTCTAGT+TGG - chr2_1:75355708-75355727 None:intergenic 30.0%
! TACTACCTATTTAAAGCCAA+AGG - chr2_1:75356048-75356067 None:intergenic 30.0%
!! TTGGCTTTAAATAGGTAGTA+TGG + chr2_1:75356048-75356067 Msa0225230:intron 30.0%
!! TGGCTTTAAATAGGTAGTAT+GGG + chr2_1:75356049-75356068 Msa0225230:intron 30.0%
ACTAAGGTTACTAGTAAAAC+TGG + chr2_1:75356448-75356467 Msa0225230:CDS 30.0%
TTTGTGCAGTTTCTTCTATA+TGG + chr2_1:75356536-75356555 Msa0225230:CDS 30.0%
AACAAAACATTCGGAGATAT+AGG - chr2_1:75356565-75356584 None:intergenic 30.0%
GACAATAATCATTATGACAG+TGG + chr2_1:75356698-75356717 Msa0225230:intron 30.0%
CACAAATTCTTACGAATCAA+TGG + chr2_1:75356963-75356982 Msa0225230:CDS 30.0%
AAATTCTTACGAATCAATGG+TGG + chr2_1:75356966-75356985 Msa0225230:CDS 30.0%
GAAACAATTGAAAATCCTGA+GGG - chr2_1:75357066-75357085 None:intergenic 30.0%
AGAAACAATTGAAAATCCTG+AGG - chr2_1:75357067-75357086 None:intergenic 30.0%
!!! GGATTTTCAATTGTTTCTGA+TGG + chr2_1:75357069-75357088 Msa0225230:CDS 30.0%
!! TTCAATTGTTTCTGATGGTT+TGG + chr2_1:75357074-75357093 Msa0225230:CDS 30.0%
ACAAGTCTAAATTGTGAAGA+TGG + chr2_1:75357270-75357289 Msa0225230:CDS 30.0%
GGTAAGTAAATGAAGAAACG+AGG - chr2_1:75350360-75350379 None:intergenic 35.0%
!!! AACTATGGAGAGAGTGTTTT+GGG - chr2_1:75350394-75350413 None:intergenic 35.0%
!!! TAACTATGGAGAGAGTGTTT+TGG - chr2_1:75350395-75350414 None:intergenic 35.0%
!! TCTTTGGCTTTAGAAGTAGA+AGG - chr2_1:75350542-75350561 None:intergenic 35.0%
! GTTGGTGAGTTAAAAACAAC+GGG - chr2_1:75350740-75350759 None:intergenic 35.0%
!! GGTTGGTGAGTTAAAAACAA+CGG - chr2_1:75350741-75350760 None:intergenic 35.0%
AATGTTCCAAGTAGATAGCT+CGG - chr2_1:75350762-75350781 None:intergenic 35.0%
CAAGTGACACTTATGTCATT+AGG + chr2_1:75350858-75350877 Msa0225230:intron 35.0%
! TTTTCTTTGCTCTAATCAGG+CGG + chr2_1:75350986-75351005 Msa0225230:intron 35.0%
!! AGGAGGGAGTTTTAGTAATA+TGG + chr2_1:75351049-75351068 Msa0225230:CDS 35.0%
!! AGGGAGTTTTAGTAATATGG+AGG + chr2_1:75351052-75351071 Msa0225230:CDS 35.0%
!! GAGTTTTAGTAATATGGAGG+TGG + chr2_1:75351055-75351074 Msa0225230:CDS 35.0%
AATGGATGAATTTGAAGGAG+AGG + chr2_1:75351163-75351182 Msa0225230:CDS 35.0%
! ATTCGTGTGCCTATTTTGTT+TGG + chr2_1:75351348-75351367 Msa0225230:intron 35.0%
ATTCTCAATAGTCACACTCA+CGG - chr2_1:75351580-75351599 None:intergenic 35.0%
GATTACCATATTGTCTGTCT+TGG + chr2_1:75351670-75351689 Msa0225230:intron 35.0%
TTAATTCACCGTCAAAACTG+TGG - chr2_1:75352058-75352077 None:intergenic 35.0%
AACTAATCAAGTGGTAAGTG+GGG - chr2_1:75352166-75352185 None:intergenic 35.0%
CAACTAATCAAGTGGTAAGT+GGG - chr2_1:75352167-75352186 None:intergenic 35.0%
ACAACTAATCAAGTGGTAAG+TGG - chr2_1:75352168-75352187 None:intergenic 35.0%
CAACAACTTAGCAAGCAATT+AGG + chr2_1:75352414-75352433 Msa0225230:CDS 35.0%
!! AACCAAAATTTGACTTGCCT+TGG - chr2_1:75352447-75352466 None:intergenic 35.0%
CTTATTTATGGTCTCTCGTA+GGG - chr2_1:75352672-75352691 None:intergenic 35.0%
AGTTACAATCAACCAACAAG+AGG - chr2_1:75353239-75353258 None:intergenic 35.0%
!! CTAGCATAGCACTTTTTATG+CGG + chr2_1:75353279-75353298 Msa0225230:intron 35.0%
!! TAGCATAGCACTTTTTATGC+GGG + chr2_1:75353280-75353299 Msa0225230:intron 35.0%
TAATACATGTGTAGGTAGAG+AGG + chr2_1:75353489-75353508 Msa0225230:intron 35.0%
! CTTTAGGGAAATATGCATCA+GGG + chr2_1:75353522-75353541 Msa0225230:CDS 35.0%
AATGGAGGAGCTTATAAAGA+TGG + chr2_1:75353664-75353683 Msa0225230:CDS 35.0%
GCTTATAAAGATGGCAACAA+TGG + chr2_1:75353673-75353692 Msa0225230:CDS 35.0%
! TCCATGGTCTGAATTTTCAA+CGG - chr2_1:75353774-75353793 None:intergenic 35.0%
TGTATCTCTTGAAGCTTCAA+TGG - chr2_1:75353810-75353829 None:intergenic 35.0%
ATTGAAGCTTCAAGAGATAC+AGG + chr2_1:75353809-75353828 Msa0225230:CDS 35.0%
!!! TTGTTTTTGCAGATCTTCCT+CGG + chr2_1:75353834-75353853 Msa0225230:CDS 35.0%
TGCTATGTTTGCAGAATCAA+TGG + chr2_1:75354011-75354030 Msa0225230:intron 35.0%
ATGTTTGCAGAATCAATGGA+AGG + chr2_1:75354015-75354034 Msa0225230:intron 35.0%
GCTGCCTTAGATATTAAACA+TGG - chr2_1:75354049-75354068 None:intergenic 35.0%
ACAGTTGACACTATATGCAA+AGG + chr2_1:75354070-75354089 Msa0225230:CDS 35.0%
TCGAATTTACCTATTCAGAC+GGG - chr2_1:75354328-75354347 None:intergenic 35.0%
CTGAATAGGTAAATTCGAAC+GGG + chr2_1:75354330-75354349 Msa0225230:intron 35.0%
TGAAAGGAACAGTTCATACA+TGG + chr2_1:75354584-75354603 Msa0225230:intron 35.0%
TTAGACAAGATATGGATGAG+AGG - chr2_1:75354945-75354964 None:intergenic 35.0%
TCACACTATCAGGACTTTAA+TGG + chr2_1:75355034-75355053 Msa0225230:intron 35.0%
TTGTTAACCGCAACAAATTG+TGG + chr2_1:75355180-75355199 Msa0225230:intron 35.0%
GATATATGCTACAAAGCAGA+TGG - chr2_1:75355301-75355320 None:intergenic 35.0%
GGAAATAGAAACAAAGGTAG+AGG + chr2_1:75355516-75355535 Msa0225230:intron 35.0%
!! GTAGAGGAAATTCTAAGATG+TGG + chr2_1:75355532-75355551 Msa0225230:intron 35.0%
TCCAATGATAAATACTGTGG+AGG + chr2_1:75355571-75355590 Msa0225230:intron 35.0%
GTTGCAAATGTTAACACCAA+TGG + chr2_1:75355680-75355699 Msa0225230:CDS 35.0%
GTTGTCTTCTACTTTGTCTA+TGG - chr2_1:75355781-75355800 None:intergenic 35.0%
CTTTAAATAGGTAGTATGGG+TGG + chr2_1:75356052-75356071 Msa0225230:intron 35.0%
TAGTAACCTTAGTCCATGTA+TGG - chr2_1:75356441-75356460 None:intergenic 35.0%
GTAAAACTGGAGAAGACATA+AGG + chr2_1:75356461-75356480 Msa0225230:CDS 35.0%
! AGGATCATTCAAGTTCTTTC+TGG - chr2_1:75356494-75356513 None:intergenic 35.0%
CAGTGGGATATAATGTCTAA+TGG + chr2_1:75356715-75356734 Msa0225230:intron 35.0%
TGGGATATAATGTCTAATGG+TGG + chr2_1:75356718-75356737 Msa0225230:CDS 35.0%
GGGATATAATGTCTAATGGT+GGG + chr2_1:75356719-75356738 Msa0225230:CDS 35.0%
TCCATTGCAAATTTAGCCAA+AGG + chr2_1:75356751-75356770 Msa0225230:CDS 35.0%
TCCTTTGGCTAAATTTGCAA+TGG - chr2_1:75356755-75356774 None:intergenic 35.0%
AAATGGTAATTACTTCGAGG+CGG + chr2_1:75357106-75357125 Msa0225230:CDS 35.0%
GAAGAGAAAAATACAGAAGG+AGG + chr2_1:75357129-75357148 Msa0225230:CDS 35.0%
!! GAGAAGCATTTGTAAGGATT+TGG - chr2_1:75357176-75357195 None:intergenic 35.0%
TCCTACAGCCAAATTAACAA+TGG + chr2_1:75357194-75357213 Msa0225230:CDS 35.0%
! TCCATTGTTAATTTGGCTGT+AGG - chr2_1:75357198-75357217 None:intergenic 35.0%
CACAGACTCCATTGTTAATT+TGG - chr2_1:75357205-75357224 None:intergenic 35.0%
CAAATTAACAATGGAGTCTG+TGG + chr2_1:75357203-75357222 Msa0225230:CDS 35.0%
!! AGCAATGGTTGTGTCATTTG+AGG - chr2_1:75350440-75350459 None:intergenic 40.0%
!! TTGGCTTTAGAAGTAGAAGG+AGG - chr2_1:75350539-75350558 None:intergenic 40.0%
CTTCTGTTAGAGTCTCACAT+CGG + chr2_1:75350819-75350838 Msa0225230:intron 40.0%
TTTCTTTGCTCTAATCAGGC+GGG + chr2_1:75350987-75351006 Msa0225230:intron 40.0%
AGTAATATGGAGGTGGAAGA+AGG + chr2_1:75351062-75351081 Msa0225230:CDS 40.0%
GTAATATGGAGGTGGAAGAA+GGG + chr2_1:75351063-75351082 Msa0225230:CDS 40.0%
TAATATGGAGGTGGAAGAAG+GGG + chr2_1:75351064-75351083 Msa0225230:CDS 40.0%
GAAATTAGCAGCGAGTATTC+AGG + chr2_1:75351122-75351141 Msa0225230:CDS 40.0%
GAGGAACTTGAAGATGATGA+AGG + chr2_1:75351182-75351201 Msa0225230:CDS 40.0%
GATGAAGGTGAAGATGATGA+AGG + chr2_1:75351197-75351216 Msa0225230:CDS 40.0%
TTCTGAACAGATCAGAGTCA+TGG + chr2_1:75351280-75351299 Msa0225230:CDS 40.0%
CAAAATAGGCACACGAATAG+AGG - chr2_1:75351346-75351365 None:intergenic 40.0%
TTCTCAATAGTCACACTCAC+GGG - chr2_1:75351579-75351598 None:intergenic 40.0%
ACTGTGCAGGTTAAGATAGT+AGG - chr2_1:75351643-75351662 None:intergenic 40.0%
!! GTAATCATAGAGTACTGTGC+AGG - chr2_1:75351656-75351675 None:intergenic 40.0%
AGGAACCAAGACAGACAATA+TGG - chr2_1:75351678-75351697 None:intergenic 40.0%
GTGCATAGGTCACTAATTTG+AGG + chr2_1:75351792-75351811 Msa0225230:intron 40.0%
ATGTAGAGTGGTCCAACAAA+TGG - chr2_1:75352269-75352288 None:intergenic 40.0%
! CTCCAAGGCAAGTCAAATTT+TGG + chr2_1:75352442-75352461 Msa0225230:CDS 40.0%
!! TGATTTGGGTACGACGATTT+TGG - chr2_1:75352470-75352489 None:intergenic 40.0%
AAATCGTCGTACCCAAATCA+AGG + chr2_1:75352470-75352489 Msa0225230:CDS 40.0%
! CCTTATTTATGGTCTCTCGT+AGG - chr2_1:75352673-75352692 None:intergenic 40.0%
CCTACGAGAGACCATAAATA+AGG + chr2_1:75352670-75352689 Msa0225230:CDS 40.0%
AAATGCCAAACTCAAAGCTG+AGG + chr2_1:75352772-75352791 Msa0225230:CDS 40.0%
!! CATAACCTCAGCTTTGAGTT+TGG - chr2_1:75352780-75352799 None:intergenic 40.0%
CGACAAAGTTAAGCTAGTAG+CGG + chr2_1:75353207-75353226 Msa0225230:intron 40.0%
! AGTTAAGCTAGTAGCGGTTT+TGG + chr2_1:75353213-75353232 Msa0225230:intron 40.0%
!! CGCATAAAAAGTGCTATGCT+AGG - chr2_1:75353281-75353300 None:intergenic 40.0%
!! GCTTTAGGGAAATATGCATC+AGG + chr2_1:75353521-75353540 Msa0225230:CDS 40.0%
TCATGACTAGTGGAACATGA+AGG - chr2_1:75353557-75353576 None:intergenic 40.0%
ATTCTCTTGGTCATGACTAG+TGG - chr2_1:75353567-75353586 None:intergenic 40.0%
GGATGTAGTAAACCAAGCAA+TGG + chr2_1:75353646-75353665 Msa0225230:CDS 40.0%
TGTAGTAAACCAAGCAATGG+AGG + chr2_1:75353649-75353668 Msa0225230:CDS 40.0%
TTATAAGCTCCTCCATTGCT+TGG - chr2_1:75353661-75353680 None:intergenic 40.0%
TCTAAGCTACGTAACCACAT+TGG - chr2_1:75353704-75353723 None:intergenic 40.0%
GAAGCTTCAATGGATCTCTT+TGG - chr2_1:75353800-75353819 None:intergenic 40.0%
GACACTATATGCAAAGGAGA+AGG + chr2_1:75354076-75354095 Msa0225230:CDS 40.0%
! GGAGAAGGTTCTAACAAGAA+TGG + chr2_1:75354091-75354110 Msa0225230:CDS 40.0%
TCTAGACCGGATTTGACTAT+CGG + chr2_1:75354245-75354264 Msa0225230:intron 40.0%
AAAAAACAGCCCGTCTGAAT+AGG + chr2_1:75354316-75354335 Msa0225230:intron 40.0%
TTTCGCACATTCACACTATC+AGG + chr2_1:75355024-75355043 Msa0225230:intron 40.0%
AATGGTCGTCCAATCTTGAT+TGG + chr2_1:75355052-75355071 Msa0225230:intron 40.0%
CTAGACGATCCAATCAAGAT+TGG - chr2_1:75355064-75355083 None:intergenic 40.0%
ATCCTAACCGTTAGATCGAA+CGG + chr2_1:75355134-75355153 Msa0225230:intron 40.0%
CGGTTAACAAATCACGCAAT+CGG - chr2_1:75355170-75355189 None:intergenic 40.0%
! CCATCTTCAAGTGTTGTACA+TGG - chr2_1:75355498-75355517 None:intergenic 40.0%
CCATGTACAACACTTGAAGA+TGG + chr2_1:75355495-75355514 Msa0225230:intron 40.0%
GCCTCCACAGTATTTATCAT+TGG - chr2_1:75355575-75355594 None:intergenic 40.0%
ACTTCTCTAGTTGGAACCAT+TGG - chr2_1:75355699-75355718 None:intergenic 40.0%
AGCAGTTGAGTGGTGAAAAA+TGG + chr2_1:75355739-75355758 Msa0225230:CDS 40.0%
GCAGTTGAGTGGTGAAAAAT+GGG + chr2_1:75355740-75355759 Msa0225230:CDS 40.0%
! GCGTTTTCTGCATTTCACTA+GGG - chr2_1:75355814-75355833 None:intergenic 40.0%
CCTCAATAATGCAACCAGAT+GGG - chr2_1:75355836-75355855 None:intergenic 40.0%
TCCTCAATAATGCAACCAGA+TGG - chr2_1:75355837-75355856 None:intergenic 40.0%
ACGTTCGCATTGAAGTTGAA+GGG - chr2_1:75356171-75356190 None:intergenic 40.0%
!!! CGAACGTCTAGTTTTCTTCA+TGG + chr2_1:75356184-75356203 Msa0225230:CDS 40.0%
TCACCAGTTGAATCCTTCAT+GGG - chr2_1:75356221-75356240 None:intergenic 40.0%
! ATTGTTAGGTGTTGCCACAT+TGG + chr2_1:75356339-75356358 Msa0225230:intron 40.0%
AGTTGGCACAAAGAATGACA+TGG + chr2_1:75356383-75356402 Msa0225230:CDS 40.0%
! AAGCTTCCATACATGGACTA+AGG + chr2_1:75356432-75356451 Msa0225230:CDS 40.0%
AATGATCCTAGTGAACCTCT+TGG + chr2_1:75356505-75356524 Msa0225230:CDS 40.0%
ATCAATCCAAGAGGTTCACT+AGG - chr2_1:75356514-75356533 None:intergenic 40.0%
GCACAAACTATCAATCCAAG+AGG - chr2_1:75356523-75356542 None:intergenic 40.0%
TGAATACCGGTAATATCCAC+AGG - chr2_1:75357000-75357019 None:intergenic 40.0%
TAGATTGCTCGAATCACATC+CGG - chr2_1:75357034-75357053 None:intergenic 40.0%
! TTTCTGATGGTTTGGAGTCA+AGG + chr2_1:75357082-75357101 Msa0225230:CDS 40.0%
GGCAAATGGTAATTACTTCG+AGG + chr2_1:75357103-75357122 Msa0225230:CDS 40.0%
AATGGTAATTACTTCGAGGC+GGG + chr2_1:75357107-75357126 Msa0225230:CDS 40.0%
CGGGAAGAGAAAAATACAGA+AGG + chr2_1:75357126-75357145 Msa0225230:CDS 40.0%
!! CTGTAGGAGAAGCATTTGTA+AGG - chr2_1:75357182-75357201 None:intergenic 40.0%
AGAAACGAGGATAGAGACGT+AGG - chr2_1:75350347-75350366 None:intergenic 45.0%
TCTGCACACATTGACAACGT+TGG - chr2_1:75350500-75350519 None:intergenic 45.0%
TGGAGAGGGAAAGAAGTCTT+TGG - chr2_1:75350558-75350577 None:intergenic 45.0%
TTCCAAGTAGATAGCTCGGT+TGG - chr2_1:75350758-75350777 None:intergenic 45.0%
TTCTTTGCTCTAATCAGGCG+GGG + chr2_1:75350988-75351007 Msa0225230:intron 45.0%
! CTAATCAGGCGGGGATTTTT+CGG + chr2_1:75350997-75351016 Msa0225230:intron 45.0%
GGTGAAGATGATGAAGGTGA+TGG + chr2_1:75351203-75351222 Msa0225230:CDS 45.0%
! GATGATGAAGGTGATGGTGA+TGG + chr2_1:75351209-75351228 Msa0225230:CDS 45.0%
!! CTCTGCTTTTCATCAGGATG+TGG - chr2_1:75352393-75352412 None:intergenic 45.0%
CACATCCTGATGAAAAGCAG+AGG + chr2_1:75352391-75352410 Msa0225230:CDS 45.0%
!! TGTTGCCTCTGCTTTTCATC+AGG - chr2_1:75352399-75352418 None:intergenic 45.0%
AGCAATTAGGTCTTGCTCCA+AGG + chr2_1:75352427-75352446 Msa0225230:CDS 45.0%
!! GGGGCAACAAGCCTTATTTA+TGG - chr2_1:75352684-75352703 None:intergenic 45.0%
CATTGCACCATCTCTGTTTG+TGG - chr2_1:75352723-75352742 None:intergenic 45.0%
CACAAACAGAGATGGTGCAA+TGG + chr2_1:75352721-75352740 Msa0225230:CDS 45.0%
CAACAATGGGTGAACCAATG+TGG + chr2_1:75353687-75353706 Msa0225230:CDS 45.0%
TGGTTACGTAGCTTAGAGAC+CGG + chr2_1:75353707-75353726 Msa0225230:CDS 45.0%
GCCGTTGAAAATTCAGACCA+TGG + chr2_1:75353770-75353789 Msa0225230:CDS 45.0%
! TGGATCTCTTTGGTCTTCCA+TGG - chr2_1:75353790-75353809 None:intergenic 45.0%
AGAAAACATTGGACGATCCG+AGG - chr2_1:75353854-75353873 None:intergenic 45.0%
GCAAATGGTAGCTACTAGCT+AGG + chr2_1:75354133-75354152 Msa0225230:intron 45.0%
CTAGACCGGATTTGACTATC+GGG + chr2_1:75354246-75354265 Msa0225230:intron 45.0%
AGATACTGCAAGCAGTTGAG+TGG + chr2_1:75355729-75355748 Msa0225230:CDS 45.0%
! GGCGTTTTCTGCATTTCACT+AGG - chr2_1:75355815-75355834 None:intergenic 45.0%
AAATGCAGAAAACGCCCATC+TGG + chr2_1:75355819-75355838 Msa0225230:CDS 45.0%
CCCATCTGGTTGCATTATTG+AGG + chr2_1:75355833-75355852 Msa0225230:CDS 45.0%
TATCGCACCATTGTCAACAG+TGG + chr2_1:75356113-75356132 Msa0225230:CDS 45.0%
!! TCAACAGTGGCCTAGCTTTT+GGG + chr2_1:75356126-75356145 Msa0225230:CDS 45.0%
GACGTTCGCATTGAAGTTGA+AGG - chr2_1:75356172-75356191 None:intergenic 45.0%
GTTCCCATGAAGGATTCAAC+TGG + chr2_1:75356215-75356234 Msa0225230:CDS 45.0%
CTCACCAGTTGAATCCTTCA+TGG - chr2_1:75356222-75356241 None:intergenic 45.0%
!! GCTTTTTCTTCCAGCCAATG+TGG - chr2_1:75356356-75356375 None:intergenic 45.0%
GTGCATCAAGCTTCCATACA+TGG + chr2_1:75356425-75356444 Msa0225230:CDS 45.0%
TTAGCCAAAGGACAAGACAG+AGG + chr2_1:75356763-75356782 Msa0225230:CDS 45.0%
ATTGCCTCTGTCTTGTCCTT+TGG - chr2_1:75356770-75356789 None:intergenic 45.0%
TACGCACCTGTGGATATTAC+CGG + chr2_1:75356991-75357010 Msa0225230:CDS 45.0%
! GGTCATCACGGATTGAATAC+CGG - chr2_1:75357013-75357032 None:intergenic 45.0%
GGTATTCAATCCGTGATGAC+CGG + chr2_1:75357012-75357031 Msa0225230:CDS 45.0%
TGAAAATCCTGAGGGCAGTA+TGG - chr2_1:75357058-75357077 None:intergenic 45.0%
! TGGTTTGGAGTCAAGGCAAA+TGG + chr2_1:75357089-75357108 Msa0225230:CDS 45.0%
!!! ATATTTTATTTTATTATAAG+TGG + chr2_1:75354621-75354640 Msa0225230:intron 5.0%
AGGATAGAGACGTAGGTGAG+GGG - chr2_1:75350340-75350359 None:intergenic 50.0%
GAGGATAGAGACGTAGGTGA+GGG - chr2_1:75350341-75350360 None:intergenic 50.0%
!!! GTGTTTTGGGAGTGGCTACA+AGG - chr2_1:75350381-75350400 None:intergenic 50.0%
!!! TGGAGAGAGTGTTTTGGGAG+TGG - chr2_1:75350389-75350408 None:intergenic 50.0%
CTAAGAGAGAGAGCTGGAGA+GGG - chr2_1:75350572-75350591 None:intergenic 50.0%
ACAAGGCTAAGAGAGAGAGC+TGG - chr2_1:75350578-75350597 None:intergenic 50.0%
CACCAACCGAGCTATCTACT+TGG + chr2_1:75350753-75350772 Msa0225230:intron 50.0%
! GAGGAAGGGAGTACAATAGG+AGG + chr2_1:75351086-75351105 Msa0225230:CDS 50.0%
TACAATAGGAGGTGAGCGTG+TGG + chr2_1:75351097-75351116 Msa0225230:CDS 50.0%
CACCATCTCTGTTTGTGGTG+GGG - chr2_1:75352718-75352737 None:intergenic 50.0%
GCACCATCTCTGTTTGTGGT+GGG - chr2_1:75352719-75352738 None:intergenic 50.0%
TGCACCATCTCTGTTTGTGG+TGG - chr2_1:75352720-75352739 None:intergenic 50.0%
!! TAGCGGTTTTGGCCTCTTGT+TGG + chr2_1:75353224-75353243 Msa0225230:intron 50.0%
!! TAGCACTTTTTATGCGGGCG+TGG + chr2_1:75353285-75353304 Msa0225230:intron 50.0%
AGAGGCTGAGAGCAGCTTTA+GGG + chr2_1:75353507-75353526 Msa0225230:CDS 50.0%
CAAGAATGGTGCAGTGCAAC+TGG + chr2_1:75354105-75354124 Msa0225230:CDS 50.0%
ATGGTGCAGTGCAACTGGTA+AGG + chr2_1:75354110-75354129 Msa0225230:intron 50.0%
TGGTGCAGTGCAACTGGTAA+GGG + chr2_1:75354111-75354130 Msa0225230:intron 50.0%
GTGCAACTGGTAAGGGCAAA+TGG + chr2_1:75354118-75354137 Msa0225230:intron 50.0%
CGTGTCCCGATAGTCAAATC+CGG - chr2_1:75354254-75354273 None:intergenic 50.0%
GTGCGAAAAAAGTGACCGCA+TGG - chr2_1:75355012-75355031 None:intergenic 50.0%
GACCGTTCGATCTAACGGTT+AGG - chr2_1:75355139-75355158 None:intergenic 50.0%
CAAATCACGCAATCGGACAC+CGG - chr2_1:75355163-75355182 None:intergenic 50.0%
!! GGAGGGACCACAATTTGTTG+CGG - chr2_1:75355190-75355209 None:intergenic 50.0%
! GGTAGTATGGGTGGAGCATT+TGG + chr2_1:75356061-75356080 Msa0225230:intron 50.0%
AGCTAGGCCACTGTTGACAA+TGG - chr2_1:75356123-75356142 None:intergenic 50.0%
!! GTCAACAGTGGCCTAGCTTT+TGG + chr2_1:75356125-75356144 Msa0225230:CDS 50.0%
!! CAACAGTGGCCTAGCTTTTG+GGG + chr2_1:75356127-75356146 Msa0225230:CDS 50.0%
AATGCCTTGCCCCAAAAGCT+AGG - chr2_1:75356139-75356158 None:intergenic 50.0%
!!! TAGCTTTTGGGGCAAGGCAT+TGG + chr2_1:75356138-75356157 Msa0225230:CDS 50.0%
GGCAACAAACGTTCCCATGA+AGG + chr2_1:75356205-75356224 Msa0225230:CDS 50.0%
! TTAGGTGTTGCCACATTGGC+TGG + chr2_1:75356343-75356362 Msa0225230:intron 50.0%
AATGGTGGTATACGCACCTG+TGG + chr2_1:75356981-75357000 Msa0225230:CDS 50.0%
CGAATCACATCCGGTCATCA+CGG - chr2_1:75357025-75357044 None:intergenic 50.0%
AATCTAGCCATACTGCCCTC+AGG + chr2_1:75357048-75357067 Msa0225230:CDS 50.0%
CGAGGATAGAGACGTAGGTG+AGG - chr2_1:75350342-75350361 None:intergenic 55.0%
GCTAAGAGAGAGAGCTGGAG+AGG - chr2_1:75350573-75350592 None:intergenic 55.0%
!! GATTTTTCGGCATGGCGGTG+CGG + chr2_1:75351010-75351029 Msa0225230:CDS 55.0%
TATGGAGGTGGAAGAAGGGG+AGG + chr2_1:75351067-75351086 Msa0225230:CDS 55.0%
AGGTGGAAGAAGGGGAGGAA+GGG + chr2_1:75351072-75351091 Msa0225230:CDS 55.0%
! GGGGAGGAAGGGAGTACAAT+AGG + chr2_1:75351083-75351102 Msa0225230:CDS 55.0%
AATAGGAGGTGAGCGTGTGG+AGG + chr2_1:75351100-75351119 Msa0225230:CDS 55.0%
!! AAGGCTTGTTGCCCCAACTG+TGG + chr2_1:75352689-75352708 Msa0225230:CDS 55.0%
!! AGGCTTGTTGCCCCAACTGT+GGG + chr2_1:75352690-75352709 Msa0225230:CDS 55.0%
GTCCCCACCACAAACAGAGA+TGG + chr2_1:75352713-75352732 Msa0225230:CDS 55.0%
GAGAGGCTGAGAGCAGCTTT+AGG + chr2_1:75353506-75353525 Msa0225230:CDS 55.0%
CCGGTGACCGTTCGATCTAA+CGG - chr2_1:75355144-75355163 None:intergenic 55.0%
CCGTTAGATCGAACGGTCAC+CGG + chr2_1:75355141-75355160 Msa0225230:intron 55.0%
GGACGAAACTCGTCGAACTG+AGG + chr2_1:75356597-75356616 Msa0225230:CDS 55.0%
!! CAGGCGGGGATTTTTCGGCA+TGG + chr2_1:75351002-75351021 Msa0225230:intron 60.0%
!! GCGGGGATTTTTCGGCATGG+CGG + chr2_1:75351005-75351024 Msa0225230:CDS 60.0%
GAGGTGGAAGAAGGGGAGGA+AGG + chr2_1:75351071-75351090 Msa0225230:CDS 60.0%
!! GGCTTGTTGCCCCAACTGTG+GGG + chr2_1:75352691-75352710 Msa0225230:CDS 60.0%
!!! GTGGCCTAGCTTTTGGGGCA+AGG + chr2_1:75356132-75356151 Msa0225230:CDS 60.0%
TGGTGGGGACCCCACAGTTG+GGG - chr2_1:75352703-75352722 None:intergenic 65.0%
! GTGGTGGGGACCCCACAGTT+GGG - chr2_1:75352704-75352723 None:intergenic 65.0%
! TGTGGTGGGGACCCCACAGT+TGG - chr2_1:75352705-75352724 None:intergenic 65.0%
CAGCGGGGGAGGGTGAAGGA+GGG + chr2_1:75351033-75351052 Msa0225230:CDS 70.0%
TCGGCATGGCGGTGCGGCAG+CGG + chr2_1:75351016-75351035 Msa0225230:CDS 75.0%
GCAGCGGGGGAGGGTGAAGG+AGG + chr2_1:75351032-75351051 Msa0225230:CDS 75.0%
! CGGCATGGCGGTGCGGCAGC+GGG + chr2_1:75351017-75351036 Msa0225230:CDS 80.0%
! GGCATGGCGGTGCGGCAGCG+GGG + chr2_1:75351018-75351037 Msa0225230:CDS 80.0%
! GCATGGCGGTGCGGCAGCGG+GGG + chr2_1:75351019-75351038 Msa0225230:CDS 80.0%
! GCGGCAGCGGGGGAGGGTGA+AGG + chr2_1:75351029-75351048 Msa0225230:CDS 80.0%
! TGGCGGTGCGGCAGCGGGGG+AGG + chr2_1:75351022-75351041 Msa0225230:CDS 85.0%
! GGCGGTGCGGCAGCGGGGGA+GGG + chr2_1:75351023-75351042 Msa0225230:CDS 85.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 75350282 75357370 75350282 ID=Msa0225230;Name=Msa0225230
chr2_1 mRNA 75350282 75357370 75350282 ID=Msa0225230-mRNA-1;Parent=Msa0225230;Name=Msa0225230-mRNA-1;_AED=0.14;_eAED=0.14;_QI=161|1|1|1|1|1|11|74|790
chr2_1 exon 75350282 75350595 75350282 ID=Msa0225230-mRNA-1:exon:22494;Parent=Msa0225230-mRNA-1
chr2_1 exon 75351005 75351306 75351005 ID=Msa0225230-mRNA-1:exon:22495;Parent=Msa0225230-mRNA-1
chr2_1 exon 75352374 75352491 75352374 ID=Msa0225230-mRNA-1:exon:22496;Parent=Msa0225230-mRNA-1
chr2_1 exon 75352599 75352793 75352599 ID=Msa0225230-mRNA-1:exon:22497;Parent=Msa0225230-mRNA-1
chr2_1 exon 75353503 75353880 75353503 ID=Msa0225230-mRNA-1:exon:22498;Parent=Msa0225230-mRNA-1
chr2_1 exon 75354025 75354126 75354025 ID=Msa0225230-mRNA-1:exon:22499;Parent=Msa0225230-mRNA-1
chr2_1 exon 75355669 75355878 75355669 ID=Msa0225230-mRNA-1:exon:22500;Parent=Msa0225230-mRNA-1
chr2_1 exon 75356062 75356236 75356062 ID=Msa0225230-mRNA-1:exon:22501;Parent=Msa0225230-mRNA-1
chr2_1 exon 75356347 75356618 75356347 ID=Msa0225230-mRNA-1:exon:22502;Parent=Msa0225230-mRNA-1
chr2_1 exon 75356718 75356804 75356718 ID=Msa0225230-mRNA-1:exon:22503;Parent=Msa0225230-mRNA-1
chr2_1 exon 75356916 75357370 75356916 ID=Msa0225230-mRNA-1:exon:22504;Parent=Msa0225230-mRNA-1
chr2_1 five_prime_UTR 75350282 75350442 75350282 ID=Msa0225230-mRNA-1:five_prime_utr;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75350443 75350595 75350443 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75351005 75351306 75351005 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75352374 75352491 75352374 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75352599 75352793 75352599 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75353503 75353880 75353503 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75354025 75354126 75354025 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75355669 75355878 75355669 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75356062 75356236 75356062 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75356347 75356618 75356347 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75356718 75356804 75356718 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 CDS 75356916 75357296 75356916 ID=Msa0225230-mRNA-1:cds;Parent=Msa0225230-mRNA-1
chr2_1 three_prime_UTR 75357297 75357370 75357297 ID=Msa0225230-mRNA-1:three_prime_utr;Parent=Msa0225230-mRNA-1
Gene Sequence

>Msa0225230

ATGACACAACCATTGCTTTTGCTCCTTAAAAAACACAACACACTTCTTTCTTCACCAACGTTGTCAATGTGTGCAGACATGTCTAATAATAATCCTCCTTCTACTTCTAAAGCCAAAGACTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGCGGGGATTTTTCGGCATGGCGGTGCGGCAGCGGGGGAGGGTGAAGGAGGGAGTTTTAGTAATATGGAGGTGGAAGAAGGGGAGGAAGGGAGTACAATAGGAGGTGAGCGTGTGGAGGAAATTAGCAGCGAGTATTCAGGTCCAACTAAATCCAAATCAATGGATGAATTTGAAGGAGAGGAACTTGAAGATGATGAAGGTGAAGATGATGAAGGTGATGGTGATGGTGATAATAAGAACAAGAAGAAGAAAAGGAAGAAATATCACAGGCACACTTCTGAACAGATCAGAGTCATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGTCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGTACCCAAATCAAGGCAATACAAGAGCGACATGAAAATTCATTGTTGAAATCAGAAATAGAGAAACTAAGGGAGAAAAATAAGACCCTACGAGAGACCATAAATAAGGCTTGTTGCCCCAACTGTGGGGTCCCCACCACAAACAGAGATGGTGCAATGGCAACTGAAGAACAACAACTACGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAGGCTGAGAGCAGCTTTAGGGAAATATGCATCAGGGACAATGTCACCTTCATGTTCCACTAGTCATGACCAAGAGAATATTAAAAGCTCTTTGGATTTTTATACTGGAATTTTTGGTCTTGATGAGTCAAGAATAATGGATGTAGTAAACCAAGCAATGGAGGAGCTTATAAAGATGGCAACAATGGGTGAACCAATGTGGTTACGTAGCTTAGAGACCGGTCGTGAAATACTTAACTATGATGAATATATGAAGGAGTTTGCCGTTGAAAATTCAGACCATGGAAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCCTCGGATCGTCCAATGTTTTCTTGATGCTAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCAGCAACAGTTGACACTATATGCAAAGGAGAAGGTTCTAACAAGAATGGTGCAGTGCAACTGATGTTTGCTGAGTTGCAAATGTTAACACCAATGGTTCCAACTAGAGAAGTGTATTTTGTCAGATACTGCAAGCAGTTGAGTGGTGAAAAATGGGCTATTGTTGATGTGTCCATAGACAAAGTAGAAGACAACATTGACAAGTCCCTAGTGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGACATTGCAAAGTAGTATGGGTGGAGCATTTGGAGTGTCAAAAGAGTGTAGTTCATTCAATGTATCGCACCATTGTCAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGCGAACGTCTAGTTTTCTTCATGGCAACAAACGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGAAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGTCAAGCAATTAGTGCATCAAGCTTCCATACATGGACTAAGGTTACTAGTAAAACTGGAGAAGACATAAGGATTAGTTCCAGAAAGAACTTGAATGATCCTAGTGAACCTCTTGGATTGATAGTTTGTGCAGTTTCTTCTATATGGTTGCCTATATCTCCGAATGTTTTGTTTGATTTCTTGAGGGACGAAACTCGTCGAACTGAGTGGGATATAATGTCTAATGGTGGGACAGTGCAATCCATTGCAAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACTATCCAAACAATTAAATCAAAAGAAAACAATATGTGGATACTGCAAGATAGCTGCACAAATTCTTACGAATCAATGGTGGTATACGCACCTGTGGATATTACCGGTATTCAATCCGTGATGACCGGATGTGATTCGAGCAATCTAGCCATACTGCCCTCAGGATTTTCAATTGTTTCTGATGGTTTGGAGTCAAGGCAAATGGTAATTACTTCGAGGCGGGAAGAGAAAAATACAGAAGGAGGATCTTTGTTTACAATAGCATTCCAAATCCTTACAAATGCTTCTCCTACAGCCAAATTAACAATGGAGTCTGTGGACTCTGTCAACTCTCTTGTATCATGTACATTGAGACACATCAAAACAAGTCTAAATTGTGAAGATGGTTAG
Protein sequence

>Msa0225230

MTQPLLLLLKKHNTLLSSPTLSMCADMSNNNPPSTSKAKDFFPSPALSLSLAGIFRHGGAAAGEGEGGSFSNMEVEEGEEGSTIGGERVEEISSEYSGPTKSKSMDEFEGEELEDDEGEDDEGDGDGDNKNKKKKRKKYHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGAMATEEQQLRIENAKLKAEVERLRAALGKYASGTMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEFAVENSDHGRPKRSIEASRDTGVVFADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDKSLVKCRKRPSGCIIEDKSNGHCKVVWVEHLECQKSVVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPSEPLGLIVCAVSSIWLPISPNVLFDFLRDETRRTEWDIMSNGGTVQSIANLAKGQDRGNAVTIQTIKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPTAKLTMESVDSVNSLVSCTLRHIKTSLNCEDG*