AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0266280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0266280 MtrunA17_Chr2g0331581 97.481 794 13 3 1 787 1 794 0.0 1597
Msa0266280 MtrunA17_Chr8g0350321 43.781 804 363 17 34 785 43 809 0.0 642
Msa0266280 MtrunA17_Chr2g0322731 44.778 699 343 10 116 785 84 768 0.0 621
Msa0266280 MtrunA17_Chr4g0024351 44.006 709 361 10 105 785 32 732 0.0 619
Msa0266280 MtrunA17_Chr7g0246631 41.624 788 391 14 39 785 18 777 0.0 617
Msa0266280 MtrunA17_Chr1g0203671 41.997 731 366 14 105 782 64 789 0.0 575
Msa0266280 MtrunA17_Chr6g0481041 39.513 739 375 13 104 784 1 725 0.0 561
Msa0266280 MtrunA17_Chr6g0472471 38.718 749 376 13 94 782 40 765 1.88e-167 502
Msa0266280 MtrunA17_Chr5g0410711 37.004 781 402 15 81 782 9 778 1.21e-166 501
Msa0266280 MtrunA17_Chr5g0394111 38.336 673 352 13 123 782 24 646 1.45e-151 457
Msa0266280 MtrunA17_Chr7g0224451 37.924 472 249 10 119 580 2 439 1.08e-105 331
Msa0266280 MtrunA17_Chr2g0292731 32.319 526 335 9 274 782 27 548 2.21e-84 279
Msa0266280 MtrunA17_Chr2g0292741 31.801 522 332 10 273 782 26 535 1.39e-79 265
Msa0266280 MtrunA17_Chr7g0224481 37.912 364 192 7 119 474 2 339 9.79e-73 241
Msa0266280 MtrunA17_Chr2g0292761 30.824 558 330 16 241 782 23 540 3.21e-69 238
Msa0266280 MtrunA17_Chr7g0224491 37.736 318 161 10 479 784 3 295 3.67e-63 213
Msa0266280 MtrunA17_Chr2g0319671 32.157 255 134 5 298 520 16 263 7.69e-34 132
Msa0266280 MtrunA17_Chr5g0419821 45.161 124 65 2 132 254 33 154 9.25e-26 104
Msa0266280 MtrunA17_Chr2g0319691 35.625 160 96 4 414 573 1 153 1.68e-25 103
Msa0266280 MtrunA17_Chr2g0319701 30.222 225 146 6 563 782 5 223 3.60e-25 105
Msa0266280 MtrunA17_Chr2g0326731 24.615 520 309 18 135 633 23 480 1.79e-23 106
Msa0266280 MtrunA17_Chr2g0319681 27.803 223 156 4 563 782 5 225 3.50e-23 99.4
Msa0266280 MtrunA17_Chr3g0140351 21.245 739 420 25 122 776 7 667 7.68e-23 104
Msa0266280 MtrunA17_Chr4g0028991 23.119 545 316 18 119 633 12 483 5.74e-22 101
Msa0266280 MtrunA17_Chr8g0340411 22.159 528 315 17 135 633 15 475 3.52e-21 99.4
Msa0266280 MtrunA17_Chr2g0331131 21.852 540 328 19 121 633 5 477 4.67e-21 99.0
Msa0266280 MtrunA17_Chr7g0224461 41.129 124 56 4 670 784 1 116 1.25e-18 82.4
Msa0266280 MtrunA17_Chr2g0304191 26.667 135 99 0 308 442 1 135 2.26e-14 70.9
Msa0266280 MtrunA17_Chr1g0205981 31.977 172 93 6 191 342 5 172 4.47e-14 72.0
Msa0266280 MtrunA17_Chr7g0265521 41.176 102 55 1 118 219 51 147 9.01e-14 71.6
Msa0266280 MtrunA17_Chr7g0224431 24.540 163 81 2 323 485 1 121 2.41e-12 64.7
Msa0266280 MtrunA17_Chr1g0175651 37.736 106 62 1 112 217 135 236 4.92e-11 64.7
Msa0266280 MtrunA17_Chr4g0055851 36.111 108 66 1 110 217 98 202 5.19e-11 64.3
Msa0266280 MtrunA17_Chr6g0453021 33.333 141 88 3 80 219 45 180 6.21e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0266280 AT1G79840.1 62.565 772 257 9 21 786 1 746 0.0 962
Msa0266280 AT1G79840.2 61.597 789 271 9 4 786 13 775 0.0 961
Msa0266280 AT1G79840.3 64.957 702 226 7 91 786 1 688 0.0 926
Msa0266280 AT1G79840.6 64.957 702 226 7 91 786 1 688 0.0 926
Msa0266280 AT1G79840.4 62.597 647 210 9 21 661 1 621 0.0 800
Msa0266280 AT4G04890.2 43.315 718 362 11 105 787 33 740 0.0 619
Msa0266280 AT4G04890.1 43.315 718 362 11 105 787 33 740 0.0 619
Msa0266280 AT1G79840.5 60.606 528 176 9 21 542 1 502 0.0 613
Msa0266280 AT4G21750.2 43.058 713 347 9 125 785 55 760 0.0 609
Msa0266280 AT4G21750.1 43.058 713 347 9 125 785 55 760 0.0 609
Msa0266280 AT4G21750.3 43.058 713 347 9 125 785 55 760 0.0 609
Msa0266280 AT4G21750.4 43.058 713 347 9 125 785 55 760 0.0 609
Msa0266280 AT4G00730.1 44.365 701 353 11 109 785 114 801 0.0 609
Msa0266280 AT1G05230.3 43.140 707 352 10 105 785 35 717 0.0 606
Msa0266280 AT1G05230.8 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.4 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.9 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.10 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.7 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.11 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.2 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.6 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.5 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT1G05230.1 43.018 709 352 10 105 785 35 719 0.0 605
Msa0266280 AT3G61150.1 42.412 738 342 12 111 785 89 806 0.0 593
Msa0266280 AT1G05230.12 42.857 581 291 8 105 660 35 599 2.79e-167 497
Msa0266280 AT5G52170.3 40.376 691 361 14 105 782 26 678 1.07e-164 493
Msa0266280 AT5G52170.1 40.376 691 361 14 105 782 26 678 1.07e-164 493
Msa0266280 AT1G73360.1 39.571 700 360 18 131 783 31 714 1.73e-163 491
Msa0266280 AT1G17920.2 38.802 701 373 14 117 784 6 683 2.22e-163 489
Msa0266280 AT1G17920.1 38.802 701 373 14 117 784 6 683 2.22e-163 489
Msa0266280 AT5G52170.2 40.087 691 368 12 105 782 26 683 2.44e-163 489
Msa0266280 AT2G32370.1 39.831 708 370 16 109 785 41 723 1.44e-160 483
Msa0266280 AT5G46880.3 35.611 761 411 17 84 782 63 806 1.25e-146 451
Msa0266280 AT5G46880.1 35.611 761 411 17 84 782 63 806 1.25e-146 451
Msa0266280 AT5G46880.2 35.611 761 411 17 84 782 63 806 1.25e-146 451
Msa0266280 AT4G17710.1 37.801 664 352 16 132 782 88 703 8.20e-134 414
Msa0266280 AT5G17320.1 32.650 732 415 17 113 785 6 718 7.81e-125 390
Msa0266280 AT3G03260.1 33.102 722 406 18 117 786 2 698 6.68e-123 385
Msa0266280 AT4G00730.2 42.857 455 228 7 109 541 114 558 3.20e-120 374
Msa0266280 AT4G25530.1 33.237 695 422 15 106 785 18 685 6.84e-120 377
Msa0266280 AT1G34650.1 32.575 703 401 18 139 785 23 708 1.61e-105 340
Msa0266280 AT3G03260.2 32.123 551 325 13 117 632 2 538 8.30e-89 290
Msa0266280 AT5G07260.2 20.632 538 371 15 198 730 10 496 1.41e-27 118
Msa0266280 AT5G07260.1 20.664 542 371 16 198 730 10 501 2.39e-27 117
Msa0266280 AT4G32880.1 21.023 704 413 26 122 749 2 638 2.78e-24 109
Msa0266280 AT5G60690.1 23.062 529 298 21 135 633 25 474 3.36e-21 99.8
Msa0266280 AT1G30490.1 22.409 656 383 26 123 717 9 599 8.25e-21 98.6
Msa0266280 AT2G34710.1 21.400 743 420 29 125 782 15 678 2.15e-18 90.9
Msa0266280 AT4G26920.1 27.179 195 124 6 286 475 47 228 1.23e-14 77.8
Msa0266280 AT3G60390.1 39.623 106 58 2 115 219 146 246 1.55e-11 66.6
Msa0266280 AT4G16780.1 38.793 116 58 3 106 217 105 211 4.73e-11 65.1

Find 184 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAGACTCCATTGTTAATT+TGG 0.153641 2_2:-66790812 None:intergenic
CTCCAAGGCAAGTCAAATTT+TGG 0.154977 2_2:+66786049 Msa0266280:CDS
GTCAACAGTGGCCTAGCTTT+TGG 0.171217 2_2:+66789735 Msa0266280:CDS
TGATTTGGGTACGACGATTT+TGG 0.178481 2_2:-66786074 None:intergenic
TTGGCTTTAAATAGGTAGTA+TGG 0.217597 2_2:+66789658 Msa0266280:intron
TTCAAATTCATCCATTGATT+TGG 0.230510 2_2:-66784546 None:intergenic
GAGAAGCATTTGTAAGGATT+TGG 0.247426 2_2:-66790783 None:intergenic
GGGGCAACAAGCCTTATTTA+TGG 0.248716 2_2:-66786288 None:intergenic
ATTTAAATAATACCTTGATT+TGG 0.259779 2_2:-66786089 None:intergenic
AGAGAATATTAAAAGCTCTT+TGG 0.271894 2_2:+66787187 Msa0266280:CDS
TTCAATTGTTTCTGATGGTT+TGG 0.287727 2_2:+66790684 Msa0266280:CDS
GTTTCCATGTTTAATATCTA+AGG 0.290461 2_2:+66787651 Msa0266280:CDS
TTTGTGCTGTTTCTTCTATA+TGG 0.290578 2_2:+66790146 Msa0266280:CDS
GTTGTCTTCTACTTTGTCTA+TGG 0.298498 2_2:-66789388 None:intergenic
GAGAGGCTGAGAGCAGCTTT+AGG 0.319197 2_2:+66787113 Msa0266280:CDS
GAAGCTTCAATGGATCTCTT+TGG 0.328107 2_2:-66787404 None:intergenic
TTTAAATAATACCTTGATTT+GGG 0.331757 2_2:-66786088 None:intergenic
CATAACCTCAGCTTTGAGTT+TGG 0.338433 2_2:-66786384 None:intergenic
TGTGGTAGGGACCCCACAAT+TGG 0.340146 2_2:-66786309 None:intergenic
CTCACCAGTTGAATCCTTCA+TGG 0.359314 2_2:-66789829 None:intergenic
ATTGCCTCTGTCTTGTCCTT+TGG 0.362072 2_2:-66790377 None:intergenic
TAACTATGGAGAGAGTGTTT+TGG 0.364889 2_2:-66783789 None:intergenic
GGTAGTATGGGTGGAGCATT+TGG 0.373488 2_2:+66789671 Msa0266280:intron
TGGAGAGGGAAAGAAGTCTT+TGG 0.377024 2_2:-66783958 None:intergenic
GAGGTGGAGGAAGGGGAGGA+AGG 0.378778 2_2:+66784461 Msa0266280:CDS
AAGATACATAACTATAACTA+TGG 0.379921 2_2:-66783803 None:intergenic
GAAATTAGCAGTGAGTATTC+AGG 0.385045 2_2:+66784512 Msa0266280:CDS
CCTACGAGAGACCATAAATA+AGG 0.385213 2_2:+66786277 Msa0266280:CDS
AAGAAATCAAACAAAACATT+AGG 0.391068 2_2:-66790181 None:intergenic
ATAAGAACAAGAAGAAGAAA+AGG 0.391486 2_2:+66784621 Msa0266280:CDS
AACCAAAATTTGACTTGCCT+TGG 0.392620 2_2:-66786051 None:intergenic
ACTAAGGTTACTAGTAAAAC+TGG 0.395797 2_2:+66790058 Msa0266280:CDS
ACATGGTGGTGCCGCGGCGG+AGG 0.396322 2_2:+66784412 Msa0266280:CDS
CAAGAATGGTGCAGTGCAAC+TGG 0.400659 2_2:+66787714 Msa0266280:CDS
TAACATGGAGGTGGAGGAAG+GGG 0.402791 2_2:+66784454 Msa0266280:CDS
AACAAAACATTAGGAGATAT+AGG 0.411699 2_2:-66790172 None:intergenic
CAACAACTTAGCAAGCAATT+AGG 0.414776 2_2:+66786021 Msa0266280:CDS
AGAGGCTGAGAGCAGCTTTA+GGG 0.415023 2_2:+66787114 Msa0266280:CDS
TCTTTGGCTTTAGAAGTAGA+AGG 0.415922 2_2:-66783942 None:intergenic
CATTGCACCATCTCTGTTTG+TGG 0.416089 2_2:-66786327 None:intergenic
ACAAAATACACTTCTCTAGT+TGG 0.422278 2_2:-66789315 None:intergenic
GGGGAGGAAGGGAGTACAGT+AGG 0.422632 2_2:+66784473 Msa0266280:CDS
TTATAAGCTCCTCCATTGCT+TGG 0.425119 2_2:-66787265 None:intergenic
TGAAAATCCTGAGGGCAGTA+TGG 0.428055 2_2:-66790665 None:intergenic
AATCAGAAATAGAGAAACTA+AGG 0.429794 2_2:+66786240 Msa0266280:CDS
GTGGTAGGGACCCCACAATT+GGG 0.430086 2_2:-66786308 None:intergenic
AGGTGGAGGAAGGGGAGGAA+GGG 0.430407 2_2:+66784462 Msa0266280:CDS
GGTGCCGCGGCGGAGGGTGA+AGG 0.436576 2_2:+66784419 Msa0266280:CDS
TGTATCTCTTGAAGCTTCAA+TGG 0.438168 2_2:-66787414 None:intergenic
TGGATCTCTTTGGTCTTCCA+TGG 0.443218 2_2:-66787394 None:intergenic
CTGTAGGAGAAGCATTTGTA+AGG 0.443396 2_2:-66790789 None:intergenic
TCCATTGATTTGGATTTCGT+TGG 0.444838 2_2:-66784536 None:intergenic
AGGCTTGTTGCCCCAATTGT+GGG 0.447887 2_2:+66786297 Msa0266280:CDS
TTAGGTGTTGCCACATTGGC+TGG 0.448272 2_2:+66789953 Msa0266280:intron
AGCAATGGTTGTGTCATTTG+AGG 0.449743 2_2:-66783840 None:intergenic
ATTGAAGCTTCAAGAGATAC+AGG 0.451772 2_2:+66787416 Msa0266280:CDS
CCCATCTGGTTGCATTATTG+AGG 0.452497 2_2:+66789443 Msa0266280:CDS
TATTAGTAACATGGAGGTGG+AGG 0.453892 2_2:+66784448 Msa0266280:CDS
TCTTGATGAGTCAAGAATAA+TGG 0.457181 2_2:+66787232 Msa0266280:CDS
ACAAGTCTAAATTGTGAAGA+TGG 0.459079 2_2:+66790880 Msa0266280:CDS
CACCATCTCTGTTTGTGGTA+GGG 0.461471 2_2:-66786322 None:intergenic
TTTCTGATGGTTTGGAGTCA+AGG 0.463190 2_2:+66790692 Msa0266280:CDS
GTGCATCAAGCTTCCATACA+TGG 0.464344 2_2:+66790035 Msa0266280:CDS
GCTTTAGGGAAATATGCATC+AGG 0.464608 2_2:+66787128 Msa0266280:CDS
GACGTTCGCATTGAAGTTGA+AGG 0.466117 2_2:-66789779 None:intergenic
AAATGCAGAAAACGCCCATC+TGG 0.466193 2_2:+66789429 Msa0266280:CDS
AATGATCCTAGTGAACATCT+TGG 0.466350 2_2:+66790115 Msa0266280:CDS
TGCTATGTTTGCAGAATCAA+TGG 0.466472 2_2:+66787620 Msa0266280:intron
TCCTTTGGCTAAATTTGCAA+TGG 0.466744 2_2:-66790362 None:intergenic
TAGTAACCTTAGTCCATGTA+TGG 0.466982 2_2:-66790048 None:intergenic
GCACCATCTCTGTTTGTGGT+AGG 0.467717 2_2:-66786323 None:intergenic
CACAAATTCTTACGAATCAA+TGG 0.474074 2_2:+66790573 Msa0266280:CDS
TACGCACCCGTGGATATTAC+CGG 0.482125 2_2:+66790601 Msa0266280:CDS
GCCGCGGCGGAGGGTGAAGG+AGG 0.485341 2_2:+66784422 Msa0266280:CDS
TTCTTCATTTACTTAGCTTG+TGG 0.488042 2_2:+66783760 Msa0266280:five_prime_UTR
GCTAAGAGAGAGAGCTGGAG+AGG 0.488674 2_2:-66783973 None:intergenic
AGTAACATGGAGGTGGAGGA+AGG 0.489700 2_2:+66784452 Msa0266280:CDS
CATGGAGGTGGAGGAAGGGG+AGG 0.489808 2_2:+66784457 Msa0266280:CDS
GTAACATGGAGGTGGAGGAA+GGG 0.491170 2_2:+66784453 Msa0266280:CDS
CTTATTTATGGTCTCTCGTA+GGG 0.492068 2_2:-66786276 None:intergenic
ACTTCTCTAGTTGGAACCAT+TGG 0.492214 2_2:-66789306 None:intergenic
GTAAAACTGGAGAAGACATA+AGG 0.495014 2_2:+66790071 Msa0266280:CDS
ATTATTGAGGATAAGTCAAA+TGG 0.496385 2_2:+66789456 Msa0266280:CDS
AAGGCTTGTTGCCCCAATTG+TGG 0.499744 2_2:+66786296 Msa0266280:CDS
TGGCTTTAAATAGGTAGTAT+GGG 0.500533 2_2:+66789659 Msa0266280:intron
CTTATAAAGATGGCAACAAT+GGG 0.505105 2_2:+66787281 Msa0266280:CDS
AGGAGGGAGTATTAGTAACA+TGG 0.505983 2_2:+66784439 Msa0266280:CDS
TCCAACGAAATCCAAATCAA+TGG 0.506209 2_2:+66784535 Msa0266280:CDS
CATGGTGGTGCCGCGGCGGA+GGG 0.509110 2_2:+66784413 Msa0266280:CDS
CAGTGGGATATAATGTCTAA+TGG 0.509556 2_2:+66790325 Msa0266280:intron
GGTATTCAATCCGTGATGAC+CGG 0.513881 2_2:+66790622 Msa0266280:CDS
CCTTATTTATGGTCTCTCGT+AGG 0.514357 2_2:-66786277 None:intergenic
AAATCAATGGATGAATTTGA+AGG 0.515118 2_2:+66784548 Msa0266280:CDS
AATCAAAAGAAAACAATATG+TGG 0.518388 2_2:+66790533 Msa0266280:CDS
GAGTATTAGTAACATGGAGG+TGG 0.523014 2_2:+66784445 Msa0266280:CDS
TCCTCAATAATGCAACCAGA+TGG 0.528035 2_2:-66789444 None:intergenic
TGGTTTGGAGTCAAGGCAAA+TGG 0.529541 2_2:+66790699 Msa0266280:CDS
GAGGAAGGGAGTACAGTAGG+AGG 0.529598 2_2:+66784476 Msa0266280:CDS
GTTCCCATGAAGGATTCAAC+TGG 0.531129 2_2:+66789825 Msa0266280:CDS
AAATCGTCGTACCCAAATCA+AGG 0.531425 2_2:+66786077 Msa0266280:CDS
AAGCTTCCATACATGGACTA+AGG 0.539054 2_2:+66790042 Msa0266280:CDS
GCTTATAAAGATGGCAACAA+TGG 0.540324 2_2:+66787280 Msa0266280:CDS
GGAGAAGGTTCTAACAAGAA+TGG 0.540967 2_2:+66787700 Msa0266280:CDS
GTTGCAAATGTTAACACCAA+TGG 0.544408 2_2:+66789290 Msa0266280:CDS
ATAGTTAAGTATTTCACGAC+CGG 0.544434 2_2:-66787333 None:intergenic
TCCATTGTTAATTTGGCTGT+AGG 0.545967 2_2:-66790805 None:intergenic
GGCAACAAACGTTCCCATGA+AGG 0.546780 2_2:+66789815 Msa0266280:CDS
AATGCCTTGCCCCAAAAGCT+AGG 0.549012 2_2:-66789746 None:intergenic
TCCATTGCAAATTTAGCCAA+AGG 0.550629 2_2:+66790361 Msa0266280:CDS
CGAATCACATCCGGTCATCA+CGG 0.551333 2_2:-66790632 None:intergenic
TAGATTGCTCGAATCACATC+CGG 0.551516 2_2:-66790641 None:intergenic
AATGGAGGAGCTTATAAAGA+TGG 0.553738 2_2:+66787271 Msa0266280:CDS
ATTCTCTTGGTCATGACTAG+TGG 0.554085 2_2:-66787171 None:intergenic
AGCAATTAGGTCTTGCTCCA+AGG 0.554546 2_2:+66786034 Msa0266280:CDS
TAACTATGATGAATATATGA+AGG 0.554639 2_2:+66787349 Msa0266280:CDS
TCACCAGTTGAATCCTTCAT+GGG 0.555142 2_2:-66789828 None:intergenic
GGGATATAATGTCTAATGGT+GGG 0.556948 2_2:+66790329 Msa0266280:CDS
GGCAAATGGTAATTACTTCG+AGG 0.560541 2_2:+66790713 Msa0266280:CDS
TACAGTAGGAGGTGAGCGTG+TGG 0.560606 2_2:+66784487 Msa0266280:CDS
AATCTAGCCATACTGCCCTC+AGG 0.562964 2_2:+66790658 Msa0266280:CDS
CGAGGATAGAGACGTAGGTG+AGG 0.563663 2_2:-66783736 None:intergenic
GGCTTGTTGCCCCAATTGTG+GGG 0.570159 2_2:+66786298 Msa0266280:CDS
AGAAAAGGAAGAAATATCAC+AGG 0.572043 2_2:+66784636 Msa0266280:CDS
AATGGTAATTACTTCGAGGC+GGG 0.572459 2_2:+66790717 Msa0266280:CDS
GGTCATCACGGATTGAATAC+CGG 0.575578 2_2:-66790620 None:intergenic
TGAATACCGGTAATATCCAC+GGG 0.576536 2_2:-66790607 None:intergenic
CCTCAATAATGCAACCAGAT+GGG 0.578551 2_2:-66789443 None:intergenic
GGATGTAGTAAACCAAGCAA+TGG 0.580722 2_2:+66787253 Msa0266280:CDS
CTAAGAGAGAGAGCTGGAGA+GGG 0.582499 2_2:-66783972 None:intergenic
TTCTGAACAGATCAGAGTCA+TGG 0.585454 2_2:+66784664 Msa0266280:CDS
ATTGTTAGGTGTTGCCACAT+TGG 0.587255 2_2:+66789949 Msa0266280:intron
ATCAGAAATAGAGAAACTAA+GGG 0.588729 2_2:+66786241 Msa0266280:CDS
TGGTAGGGACCCCACAATTG+GGG 0.589062 2_2:-66786307 None:intergenic
TGGGATATAATGTCTAATGG+TGG 0.590022 2_2:+66790328 Msa0266280:CDS
ACAAGGCTAAGAGAGAGAGC+TGG 0.592876 2_2:-66783978 None:intergenic
CCGCGGCGGAGGGTGAAGGA+GGG 0.596963 2_2:+66784423 Msa0266280:CDS
TCCTACAGCCAAATTAACAA+TGG 0.597793 2_2:+66790804 Msa0266280:CDS
GCCGTTGAAAATTCAGACCA+TGG 0.602698 2_2:+66787377 Msa0266280:CDS
TTACAGCATCAAGAAAACAT+TGG 0.605442 2_2:-66787469 None:intergenic
TAATACATGTGTAGGTAGAG+AGG 0.607160 2_2:+66787096 Msa0266280:intron
GACACTATATGCAAAGGAGA+AGG 0.607999 2_2:+66787685 Msa0266280:CDS
TGTAGTAAACCAAGCAATGG+AGG 0.608774 2_2:+66787256 Msa0266280:CDS
AGAAAACATTGGACGATCCG+AGG 0.612026 2_2:-66787458 None:intergenic
AGCTAGGCCACTGTTGACAA+TGG 0.614429 2_2:-66789730 None:intergenic
GAGGATAGAGACGTAGGTGA+GGG 0.614728 2_2:-66783735 None:intergenic
TTGAATACCGGTAATATCCA+CGG 0.616270 2_2:-66790608 None:intergenic
GATGAAGGTGAAGATGATGA+AGG 0.621690 2_2:+66784581 Msa0266280:CDS
AGAAACAATTGAAAATCCTG+AGG 0.621946 2_2:-66790674 None:intergenic
CAAATTAACAATGGAGTCTG+TGG 0.624759 2_2:+66790813 Msa0266280:CDS
GAAACAATTGAAAATCCTGA+GGG 0.625241 2_2:-66790673 None:intergenic
GTCCCTACCACAAACAGAGA+TGG 0.625554 2_2:+66786320 Msa0266280:CDS
TCGACATGGTGGTGCCGCGG+CGG 0.626277 2_2:+66784409 Msa0266280:CDS
ACGTTCGCATTGAAGTTGAA+GGG 0.628268 2_2:-66789778 None:intergenic
GAAGGAGATGAAGATGATGA+AGG 0.630048 2_2:+66784566 Msa0266280:CDS
AGTAGGAGGTGAGCGTGTGG+AGG 0.632405 2_2:+66784490 Msa0266280:CDS
CACAAACAGAGATGGTGCAA+TGG 0.635198 2_2:+66786328 Msa0266280:CDS
ACAGTTGACACTATATGCAA+AGG 0.638611 2_2:+66787679 Msa0266280:CDS
TGGTTACGTAGCTTAGAGAC+CGG 0.638972 2_2:+66787314 Msa0266280:CDS
ATCAATCCAAGATGTTCACT+AGG 0.639331 2_2:-66790121 None:intergenic
ATGTTTGCAGAATCAATGGA+AGG 0.640926 2_2:+66787624 Msa0266280:intron
AAATGCCAAACTCAAAGCTG+AGG 0.643784 2_2:+66786379 Msa0266280:CDS
TTGGCTTTAGAAGTAGAAGG+AGG 0.644576 2_2:-66783939 None:intergenic
CTTTAAATAGGTAGTATGGG+TGG 0.647600 2_2:+66789662 Msa0266280:intron
AGGATAGAGACGTAGGTGAG+GGG 0.648817 2_2:-66783734 None:intergenic
GCTGCCTTAGATATTAAACA+TGG 0.649260 2_2:-66787655 None:intergenic
CACATCCTGATGAAAAGCAG+AGG 0.653751 2_2:+66785998 Msa0266280:CDS
GATGATGAAGGTGATGGTGA+TGG 0.658053 2_2:+66784593 Msa0266280:CDS
TCTAAGCTACGTAACCACAT+TGG 0.660378 2_2:-66787308 None:intergenic
AAATGGTAATTACTTCGAGG+CGG 0.664685 2_2:+66790716 Msa0266280:CDS
GGATGAAACTCGTCGAACTG+AGG 0.665962 2_2:+66790207 Msa0266280:CDS
AGGGAGTATTAGTAACATGG+AGG 0.670845 2_2:+66784442 Msa0266280:CDS
GGTGAAGATGATGAAGGTGA+TGG 0.672812 2_2:+66784587 Msa0266280:CDS
CTTTAGGGAAATATGCATCA+GGG 0.674316 2_2:+66787129 Msa0266280:CDS
AATGGTGGTATACGCACCCG+TGG 0.675541 2_2:+66790591 Msa0266280:CDS
AGTTGGCACAAAGAATGACA+TGG 0.675595 2_2:+66789993 Msa0266280:CDS
CCCTCCTTCACCCTCCGCCG+CGG 0.676809 2_2:-66784423 None:intergenic
AGAAACGAGGATAGAGACGT+AGG 0.679306 2_2:-66783741 None:intergenic
TATCGCACCATTGTCAACAG+TGG 0.688962 2_2:+66789723 Msa0266280:CDS
AAATTCTTACGAATCAATGG+TGG 0.698012 2_2:+66790576 Msa0266280:CDS
AGATACTGCAAGCAGTTGAG+TGG 0.698583 2_2:+66789339 Msa0266280:CDS
CAACAATGGGTGAACCAATG+TGG 0.720119 2_2:+66787294 Msa0266280:CDS
TCATGACTAGTGGAACATGA+AGG 0.724034 2_2:-66787161 None:intergenic
TTAGCCAAAGGACAAGACAG+AGG 0.726395 2_2:+66790373 Msa0266280:CDS
GCTAAGTAAATGAAGAAACG+AGG 0.727875 2_2:-66783754 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTGATAATTAATATTTAA+TGG + chr2_2:66784928-66784947 Msa0266280:intron 10.0%
!! ACTGATAATTAATATTTAAT+GGG + chr2_2:66784929-66784948 Msa0266280:intron 10.0%
!! TAAAAAACTAGTATTAAATA+TGG - chr2_2:66785126-66785145 None:intergenic 10.0%
!! AATATAACTATATTAATCAA+AGG - chr2_2:66785329-66785348 None:intergenic 10.0%
!!! CTTAATTTATGTTTAAAATT+TGG + chr2_2:66785619-66785638 Msa0266280:intron 10.0%
!! AATTAAAAATTTAATCAACT+AGG + chr2_2:66785686-66785705 Msa0266280:intron 10.0%
!! ATTAAAAATTTAATCAACTA+GGG + chr2_2:66785687-66785706 Msa0266280:intron 10.0%
!!! AAAATTTTTTTTTACATGAA+TGG + chr2_2:66785941-66785960 Msa0266280:intron 10.0%
!!! TAAATTAATGAATTTCTTTT+AGG + chr2_2:66787795-66787814 Msa0266280:intron 10.0%
!!! TTTTGATATTATTTTTATGA+AGG + chr2_2:66789619-66789638 Msa0266280:intron 10.0%
!! AAAAACAAAAATTTAACTAG+AGG - chr2_2:66784110-66784129 None:intergenic 15.0%
!! AAAAAAATTAGTTCATTAGA+TGG - chr2_2:66784332-66784351 None:intergenic 15.0%
!!! ATGAACTAATTTTTTTAAGT+TGG + chr2_2:66784336-66784355 Msa0266280:intron 15.0%
!! TATTTGTTTGATATCTTATA+TGG + chr2_2:66785517-66785536 Msa0266280:intron 15.0%
!! TTTAAATAATACCTTGATTT+GGG - chr2_2:66786091-66786110 None:intergenic 15.0%
!! ATTTAAATAATACCTTGATT+TGG - chr2_2:66786092-66786111 None:intergenic 15.0%
!!! CAAAATATCTTTTAAAAATG+AGG + chr2_2:66786576-66786595 Msa0266280:intron 15.0%
!!! GAAAAATAATGAATTTTCAT+TGG + chr2_2:66786606-66786625 Msa0266280:intron 15.0%
!! AAATGGAATATATTAATCAA+TGG - chr2_2:66786922-66786941 None:intergenic 15.0%
!! AAGAAATTCATTAATTTAGT+AGG - chr2_2:66787793-66787812 None:intergenic 15.0%
!! CATTAACTAATATTAATAGT+TGG - chr2_2:66788043-66788062 None:intergenic 15.0%
!! GCAATTTAAATTAAAATTCT+AGG + chr2_2:66789005-66789024 Msa0266280:intron 15.0%
!!! TTTAACCTTAATTTTGTATT+TGG + chr2_2:66789247-66789266 Msa0266280:intron 15.0%
!! TAAAGAAAACAAAATCATAT+AGG - chr2_2:66789552-66789571 None:intergenic 15.0%
!! TAAGAATTATCATAAGAAAA+AGG + chr2_2:66789857-66789876 Msa0266280:intron 15.0%
!!! TATTTTGTATATGAATTTAG+AGG + chr2_2:66790272-66790291 Msa0266280:intron 15.0%
!!! ATTTTGTATATGAATTTAGA+GGG + chr2_2:66790273-66790292 Msa0266280:intron 15.0%
!! GAATATAAAAACAAAAGTGA+AGG - chr2_2:66783700-66783719 None:intergenic 20.0%
!! AAGATACATAACTATAACTA+TGG - chr2_2:66783806-66783825 None:intergenic 20.0%
!!! ACTTTTAAAAGAAAACTCAT+AGG - chr2_2:66784298-66784317 None:intergenic 20.0%
!!! AAAAAAAAAAAAGAGCATAG+TGG - chr2_2:66784710-66784729 None:intergenic 20.0%
!! TGAAGAAAAAGAAATTTCAT+TGG - chr2_2:66785441-66785460 None:intergenic 20.0%
!! AAAACAAAAAACTAATCAAG+TGG - chr2_2:66785781-66785800 None:intergenic 20.0%
!! AATGGTGAATTTAATATTGT+AGG + chr2_2:66785959-66785978 Msa0266280:intron 20.0%
!!! CTTTTAAAAATGAGGTAATA+CGG + chr2_2:66786584-66786603 Msa0266280:intron 20.0%
!!! TTTGTGTAGAATAGTTTTAA+AGG - chr2_2:66786667-66786686 None:intergenic 20.0%
!!! TAAAGTACTAGCTAAAAAAA+TGG - chr2_2:66786939-66786958 None:intergenic 20.0%
!!! GATTTTTATACTGGAATTTT+TGG + chr2_2:66787209-66787228 Msa0266280:CDS 20.0%
!! TAACTATGATGAATATATGA+AGG + chr2_2:66787349-66787368 Msa0266280:CDS 20.0%
!! ATGCAATGATATTATTCATA+TGG - chr2_2:66787538-66787557 None:intergenic 20.0%
!! TTAAACTTCTACAAAACAAA+AGG - chr2_2:66787584-66787603 None:intergenic 20.0%
!! ATCTTTGATATTGAATTAGA+CGG + chr2_2:66787766-66787785 Msa0266280:intron 20.0%
!!! GAGTAATTTTTAAGAATTGT+AGG - chr2_2:66787834-66787853 None:intergenic 20.0%
!!! TTCATAATGTCTTTTTTGAT+AGG - chr2_2:66788003-66788022 None:intergenic 20.0%
!! TTTCATAAAACCTTATATGT+AGG + chr2_2:66788068-66788087 Msa0266280:intron 20.0%
!!! AGAATAGAATTTTCAAACAT+AGG - chr2_2:66788312-66788331 None:intergenic 20.0%
!!! TAATGTTGTAAATGTTTTAG+TGG + chr2_2:66788331-66788350 Msa0266280:intron 20.0%
!!! AAAAAAGATTAAGTTGATTG+TGG + chr2_2:66788359-66788378 Msa0266280:intron 20.0%
!!! ATATGCTTTTGATTATAGTA+TGG + chr2_2:66788389-66788408 Msa0266280:intron 20.0%
!! TTTAAACTTTAGTAACACTT+TGG + chr2_2:66788523-66788542 Msa0266280:intron 20.0%
!!! CAGTTTTATAAAGTTGATTT+AGG + chr2_2:66788866-66788885 Msa0266280:intron 20.0%
!! TATCTATATCTATGGATATA+TGG + chr2_2:66788927-66788946 Msa0266280:intron 20.0%
!!! AGGATTAAATAAAAGTACTT+TGG + chr2_2:66789025-66789044 Msa0266280:intron 20.0%
!! ACAACTATACATATAAAATG+AGG + chr2_2:66789068-66789087 Msa0266280:intron 20.0%
!! CATACATTATGTAACAAAAA+TGG - chr2_2:66789515-66789534 None:intergenic 20.0%
!!! CATTTTTGTTACATAATGTA+TGG + chr2_2:66789513-66789532 Msa0266280:intron 20.0%
!! AAGAAATCAAACAAAACATT+AGG - chr2_2:66790184-66790203 None:intergenic 20.0%
!! TTGAATCACTATATTAAACT+CGG - chr2_2:66790235-66790254 None:intergenic 20.0%
!! ATTCATATACAAAATATCTC+AGG - chr2_2:66790268-66790287 None:intergenic 20.0%
!!! TTTTGTATATGAATTTAGAG+GGG + chr2_2:66790274-66790293 Msa0266280:intron 20.0%
!!! TAACTTCTAAGAAAAATAAG+AGG + chr2_2:66790481-66790500 Msa0266280:intron 20.0%
!! AATCAAAAGAAAACAATATG+TGG + chr2_2:66790533-66790552 Msa0266280:CDS 20.0%
! AGTTATAGTTAGAACTTACA+AGG - chr2_2:66783998-66784017 None:intergenic 25.0%
! TGTGAAGAAGAAATTAAGAA+GGG - chr2_2:66784025-66784044 None:intergenic 25.0%
! ATGTGAAGAAGAAATTAAGA+AGG - chr2_2:66784026-66784045 None:intergenic 25.0%
!!! TTTTTTTCTTTGCTCTAATC+AGG + chr2_2:66784376-66784395 Msa0266280:intron 25.0%
!! TTCAAATTCATCCATTGATT+TGG - chr2_2:66784549-66784568 None:intergenic 25.0%
! AAATCAATGGATGAATTTGA+AGG + chr2_2:66784548-66784567 Msa0266280:CDS 25.0%
! ATAAGAACAAGAAGAAGAAA+AGG + chr2_2:66784621-66784640 Msa0266280:CDS 25.0%
! AATTGTCATCCAAACAAAAT+AGG - chr2_2:66784748-66784767 None:intergenic 25.0%
! ACTATGTAGTACTATTATGA+AGG - chr2_2:66784777-66784796 None:intergenic 25.0%
!!! TGTAAGTTTTTTAAGTGCAT+AGG + chr2_2:66785398-66785417 Msa0266280:intron 25.0%
!! GTGAATAACTTTGAAAAAAC+AGG - chr2_2:66785561-66785580 None:intergenic 25.0%
! GTTATTCACGTACAAAAATA+TGG + chr2_2:66785572-66785591 Msa0266280:intron 25.0%
! TTGTGGTATATTTATTGAAG+AGG + chr2_2:66785822-66785841 Msa0266280:intron 25.0%
! CATTATTAAACACCATTTGT+TGG + chr2_2:66785860-66785879 Msa0266280:intron 25.0%
! TTCAATTCTTATATGTAGAG+TGG - chr2_2:66785887-66785906 None:intergenic 25.0%
!! ACTTATGTTGCATATTTTTC+AGG + chr2_2:66786184-66786203 Msa0266280:intron 25.0%
! AATCAGAAATAGAGAAACTA+AGG + chr2_2:66786240-66786259 Msa0266280:CDS 25.0%
! ATCAGAAATAGAGAAACTAA+GGG + chr2_2:66786241-66786260 Msa0266280:CDS 25.0%
!!! ATAGATTTATTTTGTTGCAC+TGG + chr2_2:66786709-66786728 Msa0266280:intron 25.0%
!! AAGAGCTTTTAATATTCTCT+TGG - chr2_2:66787187-66787206 None:intergenic 25.0%
! AGAGAATATTAAAAGCTCTT+TGG + chr2_2:66787187-66787206 Msa0266280:CDS 25.0%
! GATATTATTCATATGGTTCA+AGG - chr2_2:66787531-66787550 None:intergenic 25.0%
! GTTTCCATGTTTAATATCTA+AGG + chr2_2:66787651-66787670 Msa0266280:CDS 25.0%
! TCTTTGATATTGAATTAGAC+GGG + chr2_2:66787767-66787786 Msa0266280:intron 25.0%
! TCTTAAAAATTACTCTAGAC+CGG + chr2_2:66787839-66787858 Msa0266280:intron 25.0%
! TAAAACCTTATATGTAGGAA+TGG + chr2_2:66788073-66788092 Msa0266280:intron 25.0%
! ATTTACCATTCCTACATATA+AGG - chr2_2:66788081-66788100 None:intergenic 25.0%
! CATACATGGATTTATTGATA+TGG + chr2_2:66788207-66788226 Msa0266280:intron 25.0%
!!! ATCTTTCTTTTTAGAAGTGA+AGG + chr2_2:66788415-66788434 Msa0266280:intron 25.0%
! TCTGTGAAATAGATAAGTAA+AGG - chr2_2:66788461-66788480 None:intergenic 25.0%
! TATAACTTATAAGTCATGGA+GGG - chr2_2:66788817-66788836 None:intergenic 25.0%
! TTATAACTTATAAGTCATGG+AGG - chr2_2:66788818-66788837 None:intergenic 25.0%
! CACTTATAACTTATAAGTCA+TGG - chr2_2:66788821-66788840 None:intergenic 25.0%
! CATGACTTATAAGTTATAAG+TGG + chr2_2:66788819-66788838 Msa0266280:intron 25.0%
!!! TATAAAACTGACTTGTAAAG+TGG - chr2_2:66788856-66788875 None:intergenic 25.0%
!!! GATGGTTTTATATTTTGGAT+TGG - chr2_2:66788893-66788912 None:intergenic 25.0%
!!! AAGCAGATGGTTTTATATTT+TGG - chr2_2:66788898-66788917 None:intergenic 25.0%
! GTAGCATATATCTATATCTA+TGG + chr2_2:66788919-66788938 Msa0266280:intron 25.0%
!! TTTTCCAATGATAAATACTG+TGG + chr2_2:66789178-66789197 Msa0266280:intron 25.0%
! ACGTACCAAATACAAAATTA+AGG - chr2_2:66789255-66789274 None:intergenic 25.0%
! ATTATTGAGGATAAGTCAAA+TGG + chr2_2:66789456-66789475 Msa0266280:CDS 25.0%
! ATAATGTATGGAGCATAATT+TGG + chr2_2:66789525-66789544 Msa0266280:intron 25.0%
!!! AGGTTTATTGATTTTTCCTT+TGG + chr2_2:66789639-66789658 Msa0266280:intron 25.0%
!!! TTTTTCCTTTGGCTTTAAAT+AGG + chr2_2:66789650-66789669 Msa0266280:intron 25.0%
! AGTGTACAATATTTACTACT+TGG - chr2_2:66789906-66789925 None:intergenic 25.0%
! AGTGATGAAAACAAATTGTT+AGG + chr2_2:66789935-66789954 Msa0266280:intron 25.0%
!!! AAGAAAAAGCATTTTGAAGT+TGG + chr2_2:66789976-66789995 Msa0266280:CDS 25.0%
! AACAAAACATTAGGAGATAT+AGG - chr2_2:66790175-66790194 None:intergenic 25.0%
!!! ATGTTTTGTTTGATTTCTTG+AGG + chr2_2:66790185-66790204 Msa0266280:CDS 25.0%
!!! TGTTTTGTTTGATTTCTTGA+GGG + chr2_2:66790186-66790205 Msa0266280:CDS 25.0%
! ACAATAATCATTATGACAGT+GGG + chr2_2:66790309-66790328 Msa0266280:intron 25.0%
! TGAATATTGAGTAACTTACT+TGG - chr2_2:66790414-66790433 None:intergenic 25.0%
! TTGATTTAATTGTCTGCAAA+GGG - chr2_2:66790519-66790538 None:intergenic 25.0%
!! TTTGATTTAATTGTCTGCAA+AGG - chr2_2:66790520-66790539 None:intergenic 25.0%
!!! TCTCTTTTTAGGTTAGTATT+TGG + chr2_2:66790969-66790988 Msa0266280:three_prime_UTR 25.0%
!!! TTTTAGGTTAGTATTTGGTT+TGG + chr2_2:66790974-66790993 Msa0266280:three_prime_UTR 25.0%
! TTCTTCATTTACTTAGCTTG+TGG + chr2_2:66783760-66783779 Msa0266280:five_prime_UTR 30.0%
!! TTTTTAAGGAGCAAAAGCAA+TGG - chr2_2:66783858-66783877 None:intergenic 30.0%
!!! GAAGTGTGTTGTGTTTTTTA+AGG - chr2_2:66783872-66783891 None:intergenic 30.0%
ATTTGCTTTACATGCTTCTT+CGG + chr2_2:66784195-66784214 Msa0266280:intron 30.0%
AAGTGACACTTATGTCATTA+GGG + chr2_2:66784252-66784271 Msa0266280:intron 30.0%
AGAAAAGGAAGAAATATCAC+AGG + chr2_2:66784636-66784655 Msa0266280:CDS 30.0%
CAACTTTGCATTGAAAAACA+TGG + chr2_2:66785001-66785020 Msa0266280:intron 30.0%
TAACGTAGTGTGATGATTAT+CGG + chr2_2:66785365-66785384 Msa0266280:intron 30.0%
ATAACCATACCAATAGTACA+TGG - chr2_2:66785730-66785749 None:intergenic 30.0%
! TGGGGAAAAATGTTTTACAA+AGG - chr2_2:66785754-66785773 None:intergenic 30.0%
AAACTAATCAAGTGGTAAGT+GGG - chr2_2:66785773-66785792 None:intergenic 30.0%
AAAACTAATCAAGTGGTAAG+TGG - chr2_2:66785774-66785793 None:intergenic 30.0%
AATACCTCTTGATAAGATTG+TGG + chr2_2:66785805-66785824 Msa0266280:intron 30.0%
TATACCACAATCTTATCAAG+AGG - chr2_2:66785812-66785831 None:intergenic 30.0%
! ATTTATTGAAGAGGTGTACT+TGG + chr2_2:66785831-66785850 Msa0266280:intron 30.0%
! TAGACTAGTTAGACAAATTG+TGG + chr2_2:66786464-66786483 Msa0266280:intron 30.0%
TAATACGACATGAGAAATTG+TGG - chr2_2:66786549-66786568 None:intergenic 30.0%
TACACATTATAGCATCTGAT+TGG - chr2_2:66786759-66786778 None:intergenic 30.0%
CTCTTGATTAATACATGTGT+AGG + chr2_2:66787088-66787107 Msa0266280:intron 30.0%
! AGCTCTTTGGATTTTTATAC+TGG + chr2_2:66787200-66787219 Msa0266280:CDS 30.0%
TCTTGATGAGTCAAGAATAA+TGG + chr2_2:66787232-66787251 Msa0266280:CDS 30.0%
CTTATAAAGATGGCAACAAT+GGG + chr2_2:66787281-66787300 Msa0266280:CDS 30.0%
ATAGTTAAGTATTTCACGAC+CGG - chr2_2:66787336-66787355 None:intergenic 30.0%
TTACAGCATCAAGAAAACAT+TGG - chr2_2:66787472-66787491 None:intergenic 30.0%
TTCGAATTTACCTATTCAGA+CGG - chr2_2:66787936-66787955 None:intergenic 30.0%
TCTGAATAGGTAAATTCGAA+CGG + chr2_2:66787936-66787955 Msa0266280:intron 30.0%
TATGTAGGAATGGTAAATTG+AGG + chr2_2:66788083-66788102 Msa0266280:intron 30.0%
! TTTCTTGCTGTAAATCTGAA+AGG + chr2_2:66788177-66788196 Msa0266280:intron 30.0%
! TTTCTTTTGCTTGTCATGTT+TGG - chr2_2:66788257-66788276 None:intergenic 30.0%
TGACAAGCAAAAGAAAATGA+TGG + chr2_2:66788261-66788280 Msa0266280:intron 30.0%
GAGATGAATTAGACAAGATA+TGG - chr2_2:66788563-66788582 None:intergenic 30.0%
TCTTGTCTAATTCATCTCAT+TGG + chr2_2:66788565-66788584 Msa0266280:intron 30.0%
TGACAAATTATGATTCCATG+CGG + chr2_2:66788604-66788623 Msa0266280:intron 30.0%
GAAGATGGAAATAGAAACAA+AGG + chr2_2:66789120-66789139 Msa0266280:intron 30.0%
AGAGCATATACTACTTAACT+TGG + chr2_2:66789207-66789226 Msa0266280:intron 30.0%
ACAAAATACACTTCTCTAGT+TGG - chr2_2:66789318-66789337 None:intergenic 30.0%
! TACTACCTATTTAAAGCCAA+AGG - chr2_2:66789658-66789677 None:intergenic 30.0%
!! TTGGCTTTAAATAGGTAGTA+TGG + chr2_2:66789658-66789677 Msa0266280:intron 30.0%
!! TGGCTTTAAATAGGTAGTAT+GGG + chr2_2:66789659-66789678 Msa0266280:intron 30.0%
ACTAAGGTTACTAGTAAAAC+TGG + chr2_2:66790058-66790077 Msa0266280:CDS 30.0%
!! TTTGTGCTGTTTCTTCTATA+TGG + chr2_2:66790146-66790165 Msa0266280:CDS 30.0%
GACAATAATCATTATGACAG+TGG + chr2_2:66790308-66790327 Msa0266280:intron 30.0%
CACAAATTCTTACGAATCAA+TGG + chr2_2:66790573-66790592 Msa0266280:CDS 30.0%
AAATTCTTACGAATCAATGG+TGG + chr2_2:66790576-66790595 Msa0266280:CDS 30.0%
GAAACAATTGAAAATCCTGA+GGG - chr2_2:66790676-66790695 None:intergenic 30.0%
AGAAACAATTGAAAATCCTG+AGG - chr2_2:66790677-66790696 None:intergenic 30.0%
!!! GGATTTTCAATTGTTTCTGA+TGG + chr2_2:66790679-66790698 Msa0266280:CDS 30.0%
!! TTCAATTGTTTCTGATGGTT+TGG + chr2_2:66790684-66790703 Msa0266280:CDS 30.0%
ACAAGTCTAAATTGTGAAGA+TGG + chr2_2:66790880-66790899 Msa0266280:CDS 30.0%
! TCTGCTTTCTATCTCTTTTT+AGG + chr2_2:66790958-66790977 Msa0266280:three_prime_UTR 30.0%
GCTAAGTAAATGAAGAAACG+AGG - chr2_2:66783757-66783776 None:intergenic 35.0%
!!! AACTATGGAGAGAGTGTTTT+GGG - chr2_2:66783791-66783810 None:intergenic 35.0%
!!! TAACTATGGAGAGAGTGTTT+TGG - chr2_2:66783792-66783811 None:intergenic 35.0%
!! TCTTTGGCTTTAGAAGTAGA+AGG - chr2_2:66783945-66783964 None:intergenic 35.0%
GTTGGCGAGTTAAAAACAAT+AGG - chr2_2:66784133-66784152 None:intergenic 35.0%
AATGTCTCAAGTAGATAGCT+CGG - chr2_2:66784155-66784174 None:intergenic 35.0%
CAAGTGACACTTATGTCATT+AGG + chr2_2:66784251-66784270 Msa0266280:intron 35.0%
! TTTTCTTTGCTCTAATCAGG+CGG + chr2_2:66784379-66784398 Msa0266280:intron 35.0%
GAAATTAGCAGTGAGTATTC+AGG + chr2_2:66784512-66784531 Msa0266280:CDS 35.0%
TCCAACGAAATCCAAATCAA+TGG + chr2_2:66784535-66784554 Msa0266280:CDS 35.0%
!! TCCATTGATTTGGATTTCGT+TGG - chr2_2:66784539-66784558 None:intergenic 35.0%
AAAATAGGCACACGAATAGA+GGG - chr2_2:66784733-66784752 None:intergenic 35.0%
! ATTCGTGTGCCTATTTTGTT+TGG + chr2_2:66784736-66784755 Msa0266280:intron 35.0%
TTTCTCAATAGTCACACTCA+CGG - chr2_2:66785199-66785218 None:intergenic 35.0%
!! TTAATCAAAGGTATCGCTTG+AGG - chr2_2:66785317-66785336 None:intergenic 35.0%
TTAATTCACGGTCAAAACTG+TGG - chr2_2:66785667-66785686 None:intergenic 35.0%
AACTAATCAAGTGGTAAGTG+GGG - chr2_2:66785772-66785791 None:intergenic 35.0%
CAACAACTTAGCAAGCAATT+AGG + chr2_2:66786021-66786040 Msa0266280:CDS 35.0%
!! AACCAAAATTTGACTTGCCT+TGG - chr2_2:66786054-66786073 None:intergenic 35.0%
CTTATTTATGGTCTCTCGTA+GGG - chr2_2:66786279-66786298 None:intergenic 35.0%
AGTTACAATCAACCAACAAG+AGG - chr2_2:66786846-66786865 None:intergenic 35.0%
!! CTAGCATAGCACTTTTTATG+CGG + chr2_2:66786886-66786905 Msa0266280:intron 35.0%
!! TAGCATAGCACTTTTTATGC+GGG + chr2_2:66786887-66786906 Msa0266280:intron 35.0%
TAATACATGTGTAGGTAGAG+AGG + chr2_2:66787096-66787115 Msa0266280:intron 35.0%
! CTTTAGGGAAATATGCATCA+GGG + chr2_2:66787129-66787148 Msa0266280:CDS 35.0%
AATGGAGGAGCTTATAAAGA+TGG + chr2_2:66787271-66787290 Msa0266280:CDS 35.0%
GCTTATAAAGATGGCAACAA+TGG + chr2_2:66787280-66787299 Msa0266280:CDS 35.0%
! TCCATGGTCTGAATTTTCAA+CGG - chr2_2:66787381-66787400 None:intergenic 35.0%
TGTATCTCTTGAAGCTTCAA+TGG - chr2_2:66787417-66787436 None:intergenic 35.0%
ATTGAAGCTTCAAGAGATAC+AGG + chr2_2:66787416-66787435 Msa0266280:CDS 35.0%
!!! TTGTTTTTGCAGATCTTCCT+CGG + chr2_2:66787441-66787460 Msa0266280:CDS 35.0%
TGCTATGTTTGCAGAATCAA+TGG + chr2_2:66787620-66787639 Msa0266280:intron 35.0%
ATGTTTGCAGAATCAATGGA+AGG + chr2_2:66787624-66787643 Msa0266280:intron 35.0%
GCTGCCTTAGATATTAAACA+TGG - chr2_2:66787658-66787677 None:intergenic 35.0%
ACAGTTGACACTATATGCAA+AGG + chr2_2:66787679-66787698 Msa0266280:CDS 35.0%
!! CGAGAAAACACTGTTTTTCT+CGG + chr2_2:66787879-66787898 Msa0266280:intron 35.0%
TCGAATTTACCTATTCAGAC+GGG - chr2_2:66787935-66787954 None:intergenic 35.0%
CTGAATAGGTAAATTCGAAC+GGG + chr2_2:66787937-66787956 Msa0266280:intron 35.0%
TGAAAGGAACAGTTCATACA+TGG + chr2_2:66788193-66788212 Msa0266280:intron 35.0%
TTAGACAAGATATGGATGAG+AGG - chr2_2:66788555-66788574 None:intergenic 35.0%
TCACACTATCAGGACTTTAA+TGG + chr2_2:66788644-66788663 Msa0266280:intron 35.0%
TTGTTAACCGCAACAAATTG+TGG + chr2_2:66788790-66788809 Msa0266280:intron 35.0%
GATATATGCTACAAAGCAGA+TGG - chr2_2:66788911-66788930 None:intergenic 35.0%
GGAAATAGAAACAAAGGTAG+AGG + chr2_2:66789126-66789145 Msa0266280:intron 35.0%
!! GTAGAGGAAATTCTAAGATG+TGG + chr2_2:66789142-66789161 Msa0266280:intron 35.0%
TCCAATGATAAATACTGTGG+AGG + chr2_2:66789181-66789200 Msa0266280:intron 35.0%
GTTGCAAATGTTAACACCAA+TGG + chr2_2:66789290-66789309 Msa0266280:CDS 35.0%
GTTGTCTTCTACTTTGTCTA+TGG - chr2_2:66789391-66789410 None:intergenic 35.0%
CTTTAAATAGGTAGTATGGG+TGG + chr2_2:66789662-66789681 Msa0266280:intron 35.0%
TAGTAACCTTAGTCCATGTA+TGG - chr2_2:66790051-66790070 None:intergenic 35.0%
GTAAAACTGGAGAAGACATA+AGG + chr2_2:66790071-66790090 Msa0266280:CDS 35.0%
AATGATCCTAGTGAACATCT+TGG + chr2_2:66790115-66790134 Msa0266280:CDS 35.0%
ATCAATCCAAGATGTTCACT+AGG - chr2_2:66790124-66790143 None:intergenic 35.0%
CAGTGGGATATAATGTCTAA+TGG + chr2_2:66790325-66790344 Msa0266280:intron 35.0%
TGGGATATAATGTCTAATGG+TGG + chr2_2:66790328-66790347 Msa0266280:CDS 35.0%
GGGATATAATGTCTAATGGT+GGG + chr2_2:66790329-66790348 Msa0266280:CDS 35.0%
TCCATTGCAAATTTAGCCAA+AGG + chr2_2:66790361-66790380 Msa0266280:CDS 35.0%
TCCTTTGGCTAAATTTGCAA+TGG - chr2_2:66790365-66790384 None:intergenic 35.0%
TTGAATACCGGTAATATCCA+CGG - chr2_2:66790611-66790630 None:intergenic 35.0%
AAATGGTAATTACTTCGAGG+CGG + chr2_2:66790716-66790735 Msa0266280:CDS 35.0%
GAAGAGAAAAATACAGAAGG+AGG + chr2_2:66790739-66790758 Msa0266280:CDS 35.0%
!! GAGAAGCATTTGTAAGGATT+TGG - chr2_2:66790786-66790805 None:intergenic 35.0%
TCCTACAGCCAAATTAACAA+TGG + chr2_2:66790804-66790823 Msa0266280:CDS 35.0%
! TCCATTGTTAATTTGGCTGT+AGG - chr2_2:66790808-66790827 None:intergenic 35.0%
CACAGACTCCATTGTTAATT+TGG - chr2_2:66790815-66790834 None:intergenic 35.0%
CAAATTAACAATGGAGTCTG+TGG + chr2_2:66790813-66790832 Msa0266280:CDS 35.0%
! TGGTTTGGCAAAAAATAGCT+AGG + chr2_2:66790989-66791008 Msa0266280:three_prime_UTR 35.0%
GGTTTGGCAAAAAATAGCTA+GGG + chr2_2:66790990-66791009 Msa0266280:three_prime_UTR 35.0%
!! AGCAATGGTTGTGTCATTTG+AGG - chr2_2:66783843-66783862 None:intergenic 40.0%
!! TTGGCTTTAGAAGTAGAAGG+AGG - chr2_2:66783942-66783961 None:intergenic 40.0%
CTTCGGTTAGAGTCTCATAT+CGG + chr2_2:66784212-66784231 Msa0266280:intron 40.0%
TTTCTTTGCTCTAATCAGGC+GGG + chr2_2:66784380-66784399 Msa0266280:intron 40.0%
!! AGGAGGGAGTATTAGTAACA+TGG + chr2_2:66784439-66784458 Msa0266280:CDS 40.0%
!! AGGGAGTATTAGTAACATGG+AGG + chr2_2:66784442-66784461 Msa0266280:CDS 40.0%
GAGTATTAGTAACATGGAGG+TGG + chr2_2:66784445-66784464 Msa0266280:CDS 40.0%
TATTAGTAACATGGAGGTGG+AGG + chr2_2:66784448-66784467 Msa0266280:CDS 40.0%
GAAGGAGATGAAGATGATGA+AGG + chr2_2:66784566-66784585 Msa0266280:CDS 40.0%
GATGAAGGTGAAGATGATGA+AGG + chr2_2:66784581-66784600 Msa0266280:CDS 40.0%
TTCTGAACAGATCAGAGTCA+TGG + chr2_2:66784664-66784683 Msa0266280:CDS 40.0%
CAAAATAGGCACACGAATAG+AGG - chr2_2:66784734-66784753 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + chr2_2:66784952-66784971 Msa0266280:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + chr2_2:66784953-66784972 Msa0266280:intron 40.0%
TTCTTTAGCATGTGCCCTTA+GGG - chr2_2:66784970-66784989 None:intergenic 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG - chr2_2:66785100-66785119 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr2_2:66785101-66785120 None:intergenic 40.0%
TTCTCAATAGTCACACTCAC+GGG - chr2_2:66785198-66785217 None:intergenic 40.0%
ACTGTGCAGGTTAAGATAGT+AGG - chr2_2:66785262-66785281 None:intergenic 40.0%
GATTGCCATATTGTCTGTCT+TGG + chr2_2:66785289-66785308 Msa0266280:intron 40.0%
AGGAACCAAGACAGACAATA+TGG - chr2_2:66785297-66785316 None:intergenic 40.0%
GTGCATAGGTCACTAATTAG+AGG + chr2_2:66785412-66785431 Msa0266280:intron 40.0%
AGTCAGTGACCATGTACTAT+TGG + chr2_2:66785718-66785737 Msa0266280:intron 40.0%
GTGACCATGTACTATTGGTA+TGG + chr2_2:66785723-66785742 Msa0266280:intron 40.0%
ATGTAGAGTGGTCCAACAAA+TGG - chr2_2:66785875-66785894 None:intergenic 40.0%
! CTCCAAGGCAAGTCAAATTT+TGG + chr2_2:66786049-66786068 Msa0266280:CDS 40.0%
!! TGATTTGGGTACGACGATTT+TGG - chr2_2:66786077-66786096 None:intergenic 40.0%
AAATCGTCGTACCCAAATCA+AGG + chr2_2:66786077-66786096 Msa0266280:CDS 40.0%
! CCTTATTTATGGTCTCTCGT+AGG - chr2_2:66786280-66786299 None:intergenic 40.0%
CCTACGAGAGACCATAAATA+AGG + chr2_2:66786277-66786296 Msa0266280:CDS 40.0%
AAATGCCAAACTCAAAGCTG+AGG + chr2_2:66786379-66786398 Msa0266280:CDS 40.0%
!! CATAACCTCAGCTTTGAGTT+TGG - chr2_2:66786387-66786406 None:intergenic 40.0%
CGACAAAGTTAAGCTAGTAG+CGG + chr2_2:66786814-66786833 Msa0266280:intron 40.0%
! AGTTAAGCTAGTAGCGGTTT+TGG + chr2_2:66786820-66786839 Msa0266280:intron 40.0%
!! CGCATAAAAAGTGCTATGCT+AGG - chr2_2:66786888-66786907 None:intergenic 40.0%
!! GCTTTAGGGAAATATGCATC+AGG + chr2_2:66787128-66787147 Msa0266280:CDS 40.0%
TCATGACTAGTGGAACATGA+AGG - chr2_2:66787164-66787183 None:intergenic 40.0%
ATTCTCTTGGTCATGACTAG+TGG - chr2_2:66787174-66787193 None:intergenic 40.0%
GGATGTAGTAAACCAAGCAA+TGG + chr2_2:66787253-66787272 Msa0266280:CDS 40.0%
TGTAGTAAACCAAGCAATGG+AGG + chr2_2:66787256-66787275 Msa0266280:CDS 40.0%
TTATAAGCTCCTCCATTGCT+TGG - chr2_2:66787268-66787287 None:intergenic 40.0%
TCTAAGCTACGTAACCACAT+TGG - chr2_2:66787311-66787330 None:intergenic 40.0%
GAAGCTTCAATGGATCTCTT+TGG - chr2_2:66787407-66787426 None:intergenic 40.0%
GACACTATATGCAAAGGAGA+AGG + chr2_2:66787685-66787704 Msa0266280:CDS 40.0%
! GGAGAAGGTTCTAACAAGAA+TGG + chr2_2:66787700-66787719 Msa0266280:CDS 40.0%
TCTAGACCGGATTTGACTAT+CGG + chr2_2:66787852-66787871 Msa0266280:intron 40.0%
AAAAAACAGCCCGTCTGAAT+AGG + chr2_2:66787923-66787942 Msa0266280:intron 40.0%
TTTCGCACATTCACACTATC+AGG + chr2_2:66788634-66788653 Msa0266280:intron 40.0%
ATCCTAACCGTTAGATCGAA+CGG + chr2_2:66788744-66788763 Msa0266280:intron 40.0%
CGGTTAACAAATCACGCAAT+CGG - chr2_2:66788780-66788799 None:intergenic 40.0%
! CCATCTTCAAGTGTTGTACA+TGG - chr2_2:66789108-66789127 None:intergenic 40.0%
CCATGTACAACACTTGAAGA+TGG + chr2_2:66789105-66789124 Msa0266280:intron 40.0%
GCCTCCACAGTATTTATCAT+TGG - chr2_2:66789185-66789204 None:intergenic 40.0%
ACTTCTCTAGTTGGAACCAT+TGG - chr2_2:66789309-66789328 None:intergenic 40.0%
AGCAGTTGAGTGGTGAAAAA+TGG + chr2_2:66789349-66789368 Msa0266280:CDS 40.0%
GCAGTTGAGTGGTGAAAAAT+GGG + chr2_2:66789350-66789369 Msa0266280:CDS 40.0%
! GCGTTTTCTGCATTTCACTA+GGG - chr2_2:66789424-66789443 None:intergenic 40.0%
CCTCAATAATGCAACCAGAT+GGG - chr2_2:66789446-66789465 None:intergenic 40.0%
TCCTCAATAATGCAACCAGA+TGG - chr2_2:66789447-66789466 None:intergenic 40.0%
ACGTTCGCATTGAAGTTGAA+GGG - chr2_2:66789781-66789800 None:intergenic 40.0%
!!! CGAACGTCTAGTTTTCTTCA+TGG + chr2_2:66789794-66789813 Msa0266280:CDS 40.0%
TCACCAGTTGAATCCTTCAT+GGG - chr2_2:66789831-66789850 None:intergenic 40.0%
! ATTGTTAGGTGTTGCCACAT+TGG + chr2_2:66789949-66789968 Msa0266280:intron 40.0%
AGTTGGCACAAAGAATGACA+TGG + chr2_2:66789993-66790012 Msa0266280:CDS 40.0%
! AAGCTTCCATACATGGACTA+AGG + chr2_2:66790042-66790061 Msa0266280:CDS 40.0%
TGAATACCGGTAATATCCAC+GGG - chr2_2:66790610-66790629 None:intergenic 40.0%
TAGATTGCTCGAATCACATC+CGG - chr2_2:66790644-66790663 None:intergenic 40.0%
! TTTCTGATGGTTTGGAGTCA+AGG + chr2_2:66790692-66790711 Msa0266280:CDS 40.0%
GGCAAATGGTAATTACTTCG+AGG + chr2_2:66790713-66790732 Msa0266280:CDS 40.0%
AATGGTAATTACTTCGAGGC+GGG + chr2_2:66790717-66790736 Msa0266280:CDS 40.0%
CGGGAAGAGAAAAATACAGA+AGG + chr2_2:66790736-66790755 Msa0266280:CDS 40.0%
!! CTGTAGGAGAAGCATTTGTA+AGG - chr2_2:66790792-66790811 None:intergenic 40.0%
AGAAACGAGGATAGAGACGT+AGG - chr2_2:66783744-66783763 None:intergenic 45.0%
TGGAGAGGGAAAGAAGTCTT+TGG - chr2_2:66783961-66783980 None:intergenic 45.0%
TCTCAAGTAGATAGCTCGGT+TGG - chr2_2:66784151-66784170 None:intergenic 45.0%
TTCTTTGCTCTAATCAGGCG+GGG + chr2_2:66784381-66784400 Msa0266280:intron 45.0%
GGTGAAGATGATGAAGGTGA+TGG + chr2_2:66784587-66784606 Msa0266280:CDS 45.0%
! GATGATGAAGGTGATGGTGA+TGG + chr2_2:66784593-66784612 Msa0266280:CDS 45.0%
GTTCTTTAGCATGTGCCCTT+AGG - chr2_2:66784971-66784990 None:intergenic 45.0%
TTCCTTAACATGTGCCCTTG+AGG + chr2_2:66785083-66785102 Msa0266280:intron 45.0%
TCCTTAACATGTGCCCTTGA+GGG + chr2_2:66785084-66785103 Msa0266280:intron 45.0%
!! GCAATCATAGAGTACTGTGC+AGG - chr2_2:66785275-66785294 None:intergenic 45.0%
!! CTCTGCTTTTCATCAGGATG+TGG - chr2_2:66786000-66786019 None:intergenic 45.0%
CACATCCTGATGAAAAGCAG+AGG + chr2_2:66785998-66786017 Msa0266280:CDS 45.0%
!! TGTTGCCTCTGCTTTTCATC+AGG - chr2_2:66786006-66786025 None:intergenic 45.0%
AGCAATTAGGTCTTGCTCCA+AGG + chr2_2:66786034-66786053 Msa0266280:CDS 45.0%
!! GGGGCAACAAGCCTTATTTA+TGG - chr2_2:66786291-66786310 None:intergenic 45.0%
CACCATCTCTGTTTGTGGTA+GGG - chr2_2:66786325-66786344 None:intergenic 45.0%
CATTGCACCATCTCTGTTTG+TGG - chr2_2:66786330-66786349 None:intergenic 45.0%
CACAAACAGAGATGGTGCAA+TGG + chr2_2:66786328-66786347 Msa0266280:CDS 45.0%
CAACAATGGGTGAACCAATG+TGG + chr2_2:66787294-66787313 Msa0266280:CDS 45.0%
TGGTTACGTAGCTTAGAGAC+CGG + chr2_2:66787314-66787333 Msa0266280:CDS 45.0%
GCCGTTGAAAATTCAGACCA+TGG + chr2_2:66787377-66787396 Msa0266280:CDS 45.0%
! TGGATCTCTTTGGTCTTCCA+TGG - chr2_2:66787397-66787416 None:intergenic 45.0%
AGAAAACATTGGACGATCCG+AGG - chr2_2:66787461-66787480 None:intergenic 45.0%
GCAAATGGTAGCTACTAGCT+AGG + chr2_2:66787742-66787761 Msa0266280:intron 45.0%
CTAGACCGGATTTGACTATC+GGG + chr2_2:66787853-66787872 Msa0266280:intron 45.0%
AGATACTGCAAGCAGTTGAG+TGG + chr2_2:66789339-66789358 Msa0266280:CDS 45.0%
! GGCGTTTTCTGCATTTCACT+AGG - chr2_2:66789425-66789444 None:intergenic 45.0%
AAATGCAGAAAACGCCCATC+TGG + chr2_2:66789429-66789448 Msa0266280:CDS 45.0%
CCCATCTGGTTGCATTATTG+AGG + chr2_2:66789443-66789462 Msa0266280:CDS 45.0%
TATCGCACCATTGTCAACAG+TGG + chr2_2:66789723-66789742 Msa0266280:CDS 45.0%
!! TCAACAGTGGCCTAGCTTTT+GGG + chr2_2:66789736-66789755 Msa0266280:CDS 45.0%
GACGTTCGCATTGAAGTTGA+AGG - chr2_2:66789782-66789801 None:intergenic 45.0%
GTTCCCATGAAGGATTCAAC+TGG + chr2_2:66789825-66789844 Msa0266280:CDS 45.0%
CTCACCAGTTGAATCCTTCA+TGG - chr2_2:66789832-66789851 None:intergenic 45.0%
!! GCTTTTTCTTCCAGCCAATG+TGG - chr2_2:66789966-66789985 None:intergenic 45.0%
GTGCATCAAGCTTCCATACA+TGG + chr2_2:66790035-66790054 Msa0266280:CDS 45.0%
TTAGCCAAAGGACAAGACAG+AGG + chr2_2:66790373-66790392 Msa0266280:CDS 45.0%
ATTGCCTCTGTCTTGTCCTT+TGG - chr2_2:66790380-66790399 None:intergenic 45.0%
! GGTCATCACGGATTGAATAC+CGG - chr2_2:66790623-66790642 None:intergenic 45.0%
GGTATTCAATCCGTGATGAC+CGG + chr2_2:66790622-66790641 Msa0266280:CDS 45.0%
TGAAAATCCTGAGGGCAGTA+TGG - chr2_2:66790668-66790687 None:intergenic 45.0%
! TGGTTTGGAGTCAAGGCAAA+TGG + chr2_2:66790699-66790718 Msa0266280:CDS 45.0%
!! TATTATATTACTAATTTAAA+AGG + chr2_2:66785155-66785174 Msa0266280:intron 5.0%
!!! TAAATTTTTAATTTAATTCA+CGG - chr2_2:66785679-66785698 None:intergenic 5.0%
!!! ATATTTTATTTTATTATAAG+TGG + chr2_2:66788230-66788249 Msa0266280:intron 5.0%
AGGATAGAGACGTAGGTGAG+GGG - chr2_2:66783737-66783756 None:intergenic 50.0%
GAGGATAGAGACGTAGGTGA+GGG - chr2_2:66783738-66783757 None:intergenic 50.0%
!!! TGGAGAGAGTGTTTTGGGAG+TGG - chr2_2:66783786-66783805 None:intergenic 50.0%
CTAAGAGAGAGAGCTGGAGA+GGG - chr2_2:66783975-66783994 None:intergenic 50.0%
ACAAGGCTAAGAGAGAGAGC+TGG - chr2_2:66783981-66784000 None:intergenic 50.0%
AGTAACATGGAGGTGGAGGA+AGG + chr2_2:66784452-66784471 Msa0266280:CDS 50.0%
GTAACATGGAGGTGGAGGAA+GGG + chr2_2:66784453-66784472 Msa0266280:CDS 50.0%
TAACATGGAGGTGGAGGAAG+GGG + chr2_2:66784454-66784473 Msa0266280:CDS 50.0%
!! AAGGCTTGTTGCCCCAATTG+TGG + chr2_2:66786296-66786315 Msa0266280:CDS 50.0%
!! AGGCTTGTTGCCCCAATTGT+GGG + chr2_2:66786297-66786316 Msa0266280:CDS 50.0%
GTCCCTACCACAAACAGAGA+TGG + chr2_2:66786320-66786339 Msa0266280:CDS 50.0%
GCACCATCTCTGTTTGTGGT+AGG - chr2_2:66786326-66786345 None:intergenic 50.0%
!! TAGCGGTTTTGGCCTCTTGT+TGG + chr2_2:66786831-66786850 Msa0266280:intron 50.0%
!! TAGCACTTTTTATGCGGGCG+TGG + chr2_2:66786892-66786911 Msa0266280:intron 50.0%
AGAGGCTGAGAGCAGCTTTA+GGG + chr2_2:66787114-66787133 Msa0266280:CDS 50.0%
CAAGAATGGTGCAGTGCAAC+TGG + chr2_2:66787714-66787733 Msa0266280:CDS 50.0%
ATGGTGCAGTGCAACTGGTA+AGG + chr2_2:66787719-66787738 Msa0266280:intron 50.0%
TGGTGCAGTGCAACTGGTAA+GGG + chr2_2:66787720-66787739 Msa0266280:intron 50.0%
GTGCAACTGGTAAGGGCAAA+TGG + chr2_2:66787727-66787746 Msa0266280:intron 50.0%
CGTGTCCCGATAGTCAAATC+CGG - chr2_2:66787861-66787880 None:intergenic 50.0%
GTGCGAAAAAAGTGACCGCA+TGG - chr2_2:66788622-66788641 None:intergenic 50.0%
GACCGTTCGATCTAACGGTT+AGG - chr2_2:66788749-66788768 None:intergenic 50.0%
CAAATCACGCAATCGGACAC+CGG - chr2_2:66788773-66788792 None:intergenic 50.0%
!! GGAGGGACCACAATTTGTTG+CGG - chr2_2:66788800-66788819 None:intergenic 50.0%
! GGTAGTATGGGTGGAGCATT+TGG + chr2_2:66789671-66789690 Msa0266280:intron 50.0%
AGCTAGGCCACTGTTGACAA+TGG - chr2_2:66789733-66789752 None:intergenic 50.0%
!! GTCAACAGTGGCCTAGCTTT+TGG + chr2_2:66789735-66789754 Msa0266280:CDS 50.0%
!! CAACAGTGGCCTAGCTTTTG+GGG + chr2_2:66789737-66789756 Msa0266280:CDS 50.0%
AATGCCTTGCCCCAAAAGCT+AGG - chr2_2:66789749-66789768 None:intergenic 50.0%
!!! TAGCTTTTGGGGCAAGGCAT+TGG + chr2_2:66789748-66789767 Msa0266280:CDS 50.0%
GGCAACAAACGTTCCCATGA+AGG + chr2_2:66789815-66789834 Msa0266280:CDS 50.0%
! TTAGGTGTTGCCACATTGGC+TGG + chr2_2:66789953-66789972 Msa0266280:intron 50.0%
GGATGAAACTCGTCGAACTG+AGG + chr2_2:66790207-66790226 Msa0266280:CDS 50.0%
TACGCACCCGTGGATATTAC+CGG + chr2_2:66790601-66790620 Msa0266280:CDS 50.0%
CGAATCACATCCGGTCATCA+CGG - chr2_2:66790635-66790654 None:intergenic 50.0%
AATCTAGCCATACTGCCCTC+AGG + chr2_2:66790658-66790677 Msa0266280:CDS 50.0%
CGAGGATAGAGACGTAGGTG+AGG - chr2_2:66783739-66783758 None:intergenic 55.0%
GCTAAGAGAGAGAGCTGGAG+AGG - chr2_2:66783976-66783995 None:intergenic 55.0%
!! CAGGCGGGGATTTTTCGACA+TGG + chr2_2:66784395-66784414 Msa0266280:intron 55.0%
!! GCGGGGATTTTTCGACATGG+TGG + chr2_2:66784398-66784417 Msa0266280:CDS 55.0%
!! TTTTCGACATGGTGGTGCCG+CGG + chr2_2:66784406-66784425 Msa0266280:CDS 55.0%
! GAGGAAGGGAGTACAGTAGG+AGG + chr2_2:66784476-66784495 Msa0266280:CDS 55.0%
TACAGTAGGAGGTGAGCGTG+TGG + chr2_2:66784487-66784506 Msa0266280:CDS 55.0%
! GCCCTCAAGGGCACATGTTA+AGG - chr2_2:66785088-66785107 None:intergenic 55.0%
!! GGCTTGTTGCCCCAATTGTG+GGG + chr2_2:66786298-66786317 Msa0266280:CDS 55.0%
TGGTAGGGACCCCACAATTG+GGG - chr2_2:66786310-66786329 None:intergenic 55.0%
GTGGTAGGGACCCCACAATT+GGG - chr2_2:66786311-66786330 None:intergenic 55.0%
TGTGGTAGGGACCCCACAAT+TGG - chr2_2:66786312-66786331 None:intergenic 55.0%
GAGAGGCTGAGAGCAGCTTT+AGG + chr2_2:66787113-66787132 Msa0266280:CDS 55.0%
CCGGTGACCGTTCGATCTAA+CGG - chr2_2:66788754-66788773 None:intergenic 55.0%
CCGTTAGATCGAACGGTCAC+CGG + chr2_2:66788751-66788770 Msa0266280:intron 55.0%
AATGGTGGTATACGCACCCG+TGG + chr2_2:66790591-66790610 Msa0266280:CDS 55.0%
AGGTGGAGGAAGGGGAGGAA+GGG + chr2_2:66784462-66784481 Msa0266280:CDS 60.0%
! GGGGAGGAAGGGAGTACAGT+AGG + chr2_2:66784473-66784492 Msa0266280:CDS 60.0%
AGTAGGAGGTGAGCGTGTGG+AGG + chr2_2:66784490-66784509 Msa0266280:CDS 60.0%
!!! GTGGCCTAGCTTTTGGGGCA+AGG + chr2_2:66789742-66789761 Msa0266280:CDS 60.0%
CATGGAGGTGGAGGAAGGGG+AGG + chr2_2:66784457-66784476 Msa0266280:CDS 65.0%
GAGGTGGAGGAAGGGGAGGA+AGG + chr2_2:66784461-66784480 Msa0266280:CDS 65.0%
!! TCGACATGGTGGTGCCGCGG+CGG + chr2_2:66784409-66784428 Msa0266280:CDS 70.0%
!! ACATGGTGGTGCCGCGGCGG+AGG + chr2_2:66784412-66784431 Msa0266280:CDS 75.0%
!! CATGGTGGTGCCGCGGCGGA+GGG + chr2_2:66784413-66784432 Msa0266280:CDS 75.0%
CCCTCCTTCACCCTCCGCCG+CGG - chr2_2:66784426-66784445 None:intergenic 75.0%
CCGCGGCGGAGGGTGAAGGA+GGG + chr2_2:66784423-66784442 Msa0266280:CDS 75.0%
!! GGTGCCGCGGCGGAGGGTGA+AGG + chr2_2:66784419-66784438 Msa0266280:CDS 80.0%
! GCCGCGGCGGAGGGTGAAGG+AGG + chr2_2:66784422-66784441 Msa0266280:CDS 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 66783679 66791022 66783679 ID=Msa0266280;Name=Msa0266280
chr2_2 mRNA 66783679 66791022 66783679 ID=Msa0266280-mRNA-1;Parent=Msa0266280;Name=Msa0266280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=167|1|1|1|1|1|11|116|787
chr2_2 exon 66783679 66783998 66783679 ID=Msa0266280-mRNA-1:exon:21260;Parent=Msa0266280-mRNA-1
chr2_2 exon 66784398 66784690 66784398 ID=Msa0266280-mRNA-1:exon:21261;Parent=Msa0266280-mRNA-1
chr2_2 exon 66785981 66786098 66785981 ID=Msa0266280-mRNA-1:exon:21262;Parent=Msa0266280-mRNA-1
chr2_2 exon 66786206 66786400 66786206 ID=Msa0266280-mRNA-1:exon:21263;Parent=Msa0266280-mRNA-1
chr2_2 exon 66787110 66787487 66787110 ID=Msa0266280-mRNA-1:exon:21264;Parent=Msa0266280-mRNA-1
chr2_2 exon 66787634 66787735 66787634 ID=Msa0266280-mRNA-1:exon:21265;Parent=Msa0266280-mRNA-1
chr2_2 exon 66789279 66789488 66789279 ID=Msa0266280-mRNA-1:exon:21266;Parent=Msa0266280-mRNA-1
chr2_2 exon 66789672 66789846 66789672 ID=Msa0266280-mRNA-1:exon:21267;Parent=Msa0266280-mRNA-1
chr2_2 exon 66789957 66790228 66789957 ID=Msa0266280-mRNA-1:exon:21268;Parent=Msa0266280-mRNA-1
chr2_2 exon 66790328 66790414 66790328 ID=Msa0266280-mRNA-1:exon:21269;Parent=Msa0266280-mRNA-1
chr2_2 exon 66790526 66791022 66790526 ID=Msa0266280-mRNA-1:exon:21270;Parent=Msa0266280-mRNA-1
chr2_2 five_prime_UTR 66783679 66783845 66783679 ID=Msa0266280-mRNA-1:five_prime_utr;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66783846 66783998 66783846 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66784398 66784690 66784398 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66785981 66786098 66785981 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66786206 66786400 66786206 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66787110 66787487 66787110 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66787634 66787735 66787634 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66789279 66789488 66789279 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66789672 66789846 66789672 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66789957 66790228 66789957 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66790328 66790414 66790328 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 CDS 66790526 66790906 66790526 ID=Msa0266280-mRNA-1:cds;Parent=Msa0266280-mRNA-1
chr2_2 three_prime_UTR 66790907 66791022 66790907 ID=Msa0266280-mRNA-1:three_prime_utr;Parent=Msa0266280-mRNA-1
Gene Sequence

>Msa0266280

ATGACACAACCATTGCTTTTGCTCCTTAAAAAACACAACACACTTCTTTCTTCACTAACGTTGTCAATGTGTGCAGACATGTCTAATAATAATCCTCCTTCTACTTCTAAAGCCAAAGACTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGCGGGGATTTTTCGACATGGTGGTGCCGCGGCGGAGGGTGAAGGAGGGAGTATTAGTAACATGGAGGTGGAGGAAGGGGAGGAAGGGAGTACAGTAGGAGGTGAGCGTGTGGAGGAAATTAGCAGTGAGTATTCAGGTCCAACGAAATCCAAATCAATGGATGAATTTGAAGGAGATGAAGATGATGAAGGTGAAGATGATGAAGGTGATGGTGATGGTGATAATAAGAACAAGAAGAAGAAAAGGAAGAAATATCACAGGCACACTTCTGAACAGATCAGAGTCATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGCAAGCAATTAGGTCTTGCTCCAAGGCAAGTCAAATTTTGGTTCCAAAATCGTCGTACCCAAATCAAGGCAATACAAGAGCGACATGAAAATTCATTGTTGAAATCAGAAATAGAGAAACTAAGGGAGAAAAATAAGACCCTACGAGAGACCATAAATAAGGCTTGTTGCCCCAATTGTGGGGTCCCTACCACAAACAGAGATGGTGCAATGGCAACTGAAGAACAACAACTACGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAGGCTGAGAGCAGCTTTAGGGAAATATGCATCAGGGACAATGTCACCTTCATGTTCCACTAGTCATGACCAAGAGAATATTAAAAGCTCTTTGGATTTTTATACTGGAATTTTTGGTCTTGATGAGTCAAGAATAATGGATGTAGTAAACCAAGCAATGGAGGAGCTTATAAAGATGGCAACAATGGGTGAACCAATGTGGTTACGTAGCTTAGAGACCGGTCGTGAAATACTTAACTATGATGAATATATGAAGGAGTTTGCCGTTGAAAATTCAGACCATGGAAGACCAAAGAGATCCATTGAAGCTTCAAGAGATACAGGAGTTGTTTTTGCAGATCTTCCTCGGATCGTCCAATGTTTTCTTGATGCTAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCAGCAACAGTTGACACTATATGCAAAGGAGAAGGTTCTAACAAGAATGGTGCAGTGCAACTGATGTTTGCTGAGTTGCAAATGTTAACACCAATGGTTCCAACTAGAGAAGTGTATTTTGTCAGATACTGCAAGCAGTTGAGTGGTGAAAAATGGGCTATTGTTGATGTGTCCATAGACAAAGTAGAAGACAACATTGACAAGTCCCTAGTGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGACATTGCAAAGTAGTATGGGTGGAGCATTTGGAGTGTCAAAAGAGTGTAGTTCATTCAATGTATCGCACCATTGTCAACAGTGGCCTAGCTTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGCGAACGTCTAGTTTTCTTCATGGCAACAAACGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGAAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGTCAAGCAATTAGTGCATCAAGCTTCCATACATGGACTAAGGTTACTAGTAAAACTGGAGAAGACATAAGGATTAGCTCTAGAAAGAACTTGAATGATCCTAGTGAACATCTTGGATTGATAGTTTGTGCTGTTTCTTCTATATGGTTGCCTATATCTCCTAATGTTTTGTTTGATTTCTTGAGGGATGAAACTCGTCGAACTGAGTGGGATATAATGTCTAATGGTGGGACAGTGCAATCCATTGCAAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACTATCCAAACAATTAAATCAAAAGAAAACAATATGTGGATACTGCAAGATAGCTGCACAAATTCTTACGAATCAATGGTGGTATACGCACCCGTGGATATTACCGGTATTCAATCCGTGATGACCGGATGTGATTCGAGCAATCTAGCCATACTGCCCTCAGGATTTTCAATTGTTTCTGATGGTTTGGAGTCAAGGCAAATGGTAATTACTTCGAGGCGGGAAGAGAAAAATACAGAAGGAGGATCTTTGTTTACAATAGCATTCCAAATCCTTACAAATGCTTCTCCTACAGCCAAATTAACAATGGAGTCTGTGGACTCTGTCAACTCTCTTGTATCATGTACATTGAGACACATCAAAACAAGTCTAAATTGTGAAGATGGTTAG
Protein sequence

>Msa0266280

MTQPLLLLLKKHNTLLSSLTLSMCADMSNNNPPSTSKAKDFFPSPALSLSLAGIFRHGGAAAEGEGGSISNMEVEEGEEGSTVGGERVEEISSEYSGPTKSKSMDEFEGDEDDEGEDDEGDGDGDNKNKKKKRKKYHRHTSEQIRVMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLREKNKTLRETINKACCPNCGVPTTNRDGAMATEEQQLRIENAKLKAEVERLRAALGKYASGTMSPSCSTSHDQENIKSSLDFYTGIFGLDESRIMDVVNQAMEELIKMATMGEPMWLRSLETGREILNYDEYMKEFAVENSDHGRPKRSIEASRDTGVVFADLPRIVQCFLDANQWKEMFPCLISKAATVDTICKGEGSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDKSLVKCRKRPSGCIIEDKSNGHCKVVWVEHLECQKSVVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCQAISASSFHTWTKVTSKTGEDIRISSRKNLNDPSEHLGLIVCAVSSIWLPISPNVLFDFLRDETRRTEWDIMSNGGTVQSIANLAKGQDRGNAVTIQTIKSKENNMWILQDSCTNSYESMVVYAPVDITGIQSVMTGCDSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPTAKLTMESVDSVNSLVSCTLRHIKTSLNCEDG*