Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227050 | XP_003597961.1 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 3.97e-56 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227050 | sp|A1XQR9|RUXE_PIG | 72.840 | 81 | 22 | 0 | 3 | 83 | 7 | 87 | 1.57e-40 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227050 | G7IMA2 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 1.90e-56 | 177 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0227050 | Msa0259850 | 0.875242 | 3.595607e-68 | -8.615850e-47 |
| Msa0227050 | Msa0305350 | 0.941710 | 2.588279e-101 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227050 | MtrunA17_Chr2g0333491 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 3.66e-60 | 177 |
| Msa0227050 | MtrunA17_Chr5g0431231 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 3.66e-60 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0227050 | AT4G30330.1 | 89.773 | 88 | 9 | 0 | 1 | 88 | 1 | 88 | 4.65e-55 | 165 |
| Msa0227050 | AT2G18740.1 | 89.773 | 88 | 9 | 0 | 1 | 88 | 1 | 88 | 6.18e-55 | 165 |
| Msa0227050 | AT2G18740.2 | 87.324 | 71 | 9 | 0 | 1 | 71 | 1 | 71 | 2.64e-42 | 133 |
Find 41 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTGACTTAGTATTAT+TGG | 0.147663 | 2_1:-77647236 | Msa0227040:intron |
| AATTCTTTCGCTCAATTTCT+AGG | 0.208973 | 2_1:+77647290 | Msa0227050:five_prime_UTR |
| ATCGGTGTTACAGTTGGTTT+TGG | 0.276706 | 2_1:-77651276 | None:intergenic |
| TGAATACATGAATTTGGTTT+TGG | 0.297744 | 2_1:+77650738 | Msa0227050:CDS |
| TCAGGGAGGATCCTTCTTAA+AGG | 0.324647 | 2_1:+77650885 | Msa0227050:intron |
| GCAAAGCGCGGATTCAGATT+TGG | 0.362553 | 2_1:+77647513 | Msa0227050:CDS |
| CTGAAAAGGTAGTGATAAAT+CGG | 0.379052 | 2_1:-77651071 | None:intergenic |
| CACACCCTCACCTGCTTCCA+TGG | 0.399962 | 2_1:+77647350 | Msa0227050:exon |
| CAAAAGGATTTGAGGATTGA+AGG | 0.404712 | 2_1:+77647545 | Msa0227050:CDS |
| GGACAAATGCTTTGGTTTGT+TGG | 0.411244 | 2_1:+77651175 | Msa0227050:three_prime_UTR |
| ATAACTGAAGGTTATTATAT+CGG | 0.427501 | 2_1:-77651294 | None:intergenic |
| TATGCACCGGACAAATGCTT+TGG | 0.449243 | 2_1:+77651167 | Msa0227050:three_prime_UTR |
| GGTCATGACCCTTTGAACTT+TGG | 0.450628 | 2_1:-77647379 | Msa0227040:intron |
| GTGTGCGGACGATGAAGGTT+TGG | 0.458492 | 2_1:-77647332 | Msa0227040:intron |
| TTATGTTGTCTCCTTTAAGA+AGG | 0.459912 | 2_1:-77650896 | None:intergenic |
| TGGAGTCTAGGCATTAATAC+AGG | 0.462291 | 2_1:-77651256 | None:intergenic |
| ACAAATTTCAGGGGTAAATG+AGG | 0.483171 | 2_1:+77651013 | Msa0227050:intron |
| GAGAAAGCATACAATGGGTT+GGG | 0.488064 | 2_1:-77647400 | Msa0227040:intron |
| AACAAACCAAAGCATTTGTC+CGG | 0.491794 | 2_1:-77651173 | None:intergenic |
| TTGGTGCTCGCCATGGAAGC+AGG | 0.496835 | 2_1:-77647360 | Msa0227040:intron |
| ATTCTTTCGCTCAATTTCTA+GGG | 0.497920 | 2_1:+77647291 | Msa0227050:five_prime_UTR |
| AAGTTGATATTAATACTTGT+AGG | 0.500713 | 2_1:+77647193 | Msa0227050:five_prime_UTR |
| GAAATAGTAACAAACTGAAA+AGG | 0.510259 | 2_1:-77651085 | None:intergenic |
| GGCGAGCACCAAAGTTCAAA+GGG | 0.524848 | 2_1:+77647371 | Msa0227050:CDS |
| TTGAACTTTGGTGCTCGCCA+TGG | 0.529943 | 2_1:-77647367 | Msa0227040:intron |
| GCTCGCCATGGAAGCAGGTG+AGG | 0.536688 | 2_1:-77647355 | Msa0227040:intron |
| TGAGGGTGTGCGGACGATGA+AGG | 0.546987 | 2_1:-77647337 | Msa0227040:intron |
| TGAGAAAGCATACAATGGGT+TGG | 0.551589 | 2_1:-77647401 | Msa0227040:intron |
| TGGAAGCAGGTGAGGGTGTG+CGG | 0.552852 | 2_1:-77647347 | Msa0227040:intron |
| TGGCGAGCACCAAAGTTCAA+AGG | 0.558128 | 2_1:+77647370 | Msa0227050:CDS |
| CTCGCCATGGAAGCAGGTGA+GGG | 0.558194 | 2_1:-77647354 | Msa0227040:intron |
| TATTATATCGGTGTTACAGT+TGG | 0.566830 | 2_1:-77651282 | None:intergenic |
| AAATCGGCCTTCTTGTTGAG+TGG | 0.570384 | 2_1:-77651055 | None:intergenic |
| CATGGTTCCACTCAACAAGA+AGG | 0.587905 | 2_1:+77651048 | Msa0227050:three_prime_UTR |
| AATAACCTTCAGTTATGTAG+AGG | 0.590223 | 2_1:+77651301 | Msa0227050:three_prime_UTR |
| AAGAACCTCTACATAACTGA+AGG | 0.607893 | 2_1:-77651306 | None:intergenic |
| TCTTGTCAACATGTTGAACA+TGG | 0.621702 | 2_1:+77651108 | Msa0227050:three_prime_UTR |
| GTGTTTGAGAAGTATTATGT+TGG | 0.626764 | 2_1:+77651130 | Msa0227050:three_prime_UTR |
| ATGAGGATGAGCACGCCACA+TGG | 0.629028 | 2_1:+77651030 | Msa0227050:exon |
| GATTTCTTCAAAGCAAAGCG+CGG | 0.674013 | 2_1:+77647501 | Msa0227050:CDS |
| TCTTGTTGAGTGGAACCATG+TGG | 0.713214 | 2_1:-77651045 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATCATTGTTTTTTA+TGG | + | chr2_1:77647604-77647623 | Msa0227050:intron | 10.0% |
| !!! | TTTTTAGATTTTTAATGAAT+TGG | + | chr2_1:77648590-77648609 | Msa0227050:intron | 10.0% |
| !!! | TTTTTCTTTTTGTTATAAAT+AGG | + | chr2_1:77650708-77650727 | Msa0227050:intron | 10.0% |
| !!! | TTTTCTTTTTGTTATAAATA+GGG | + | chr2_1:77650709-77650728 | Msa0227050:intron | 10.0% |
| !!! | TTTTATCATCATATTCTTTA+GGG | + | chr2_1:77647170-77647189 | Msa0227050:five_prime_UTR | 15.0% |
| !!! | TCTTGTTATTCATATAAAAA+AGG | + | chr2_1:77648277-77648296 | Msa0227050:intron | 15.0% |
| !!! | CTTGTTATTCATATAAAAAA+GGG | + | chr2_1:77648278-77648297 | Msa0227050:intron | 15.0% |
| !! | AGAATTAAATATTAGAAGTT+GGG | - | chr2_1:77648619-77648638 | None:intergenic | 15.0% |
| !! | AAGAATTAAATATTAGAAGT+TGG | - | chr2_1:77648620-77648639 | None:intergenic | 15.0% |
| !! | CTATATATAAAAAGGATATA+TGG | - | chr2_1:77649078-77649097 | None:intergenic | 15.0% |
| !! | TTAAATTTGTATATGATGTT+TGG | - | chr2_1:77649286-77649305 | None:intergenic | 15.0% |
| !! | AAATCATTTCACTTAAATTT+AGG | - | chr2_1:77650987-77651006 | None:intergenic | 15.0% |
| !!! | GTTTTATCATCATATTCTTT+AGG | + | chr2_1:77647169-77647188 | Msa0227050:five_prime_UTR | 20.0% |
| !!! | AAGTTGATATTAATACTTGT+AGG | + | chr2_1:77647193-77647212 | Msa0227050:five_prime_UTR | 20.0% |
| !! | TTGTTAAAGAGAAATTGAAA+GGG | - | chr2_1:77647438-77647457 | Msa0227040:intron | 20.0% |
| !! | AAAAGAAGAGAAAAATGAAA+AGG | - | chr2_1:77648188-77648207 | Msa0227040:CDS | 20.0% |
| !!! | TATAAAAAAGGGTATATTGA+TGG | + | chr2_1:77648289-77648308 | Msa0227050:intron | 20.0% |
| !!! | ATAAAAAAGGGTATATTGAT+GGG | + | chr2_1:77648290-77648309 | Msa0227050:intron | 20.0% |
| !!! | CCTAAAAAAATTTGTTTCTT+GGG | - | chr2_1:77648492-77648511 | None:intergenic | 20.0% |
| !! | GAATTAAATATTAGAAGTTG+GGG | - | chr2_1:77648618-77648637 | None:intergenic | 20.0% |
| !!! | GCTAGTTTCTAATAAAAAAA+GGG | - | chr2_1:77648665-77648684 | None:intergenic | 20.0% |
| !!! | TGCTAGTTTCTAATAAAAAA+AGG | - | chr2_1:77648666-77648685 | None:intergenic | 20.0% |
| !!! | TTAGATCTTATTTTCAGTTA+AGG | - | chr2_1:77649156-77649175 | None:intergenic | 20.0% |
| !!! | TGAATCTAGCTAATTTTATA+GGG | - | chr2_1:77649507-77649526 | None:intergenic | 20.0% |
| !! | TTTGTAAATTAAGTTATGCT+GGG | - | chr2_1:77649790-77649809 | None:intergenic | 20.0% |
| !! | ATTTGTAAATTAAGTTATGC+TGG | - | chr2_1:77649791-77649810 | None:intergenic | 20.0% |
| !! | AAATTAATAAACCAAAAGAC+AGG | - | chr2_1:77650022-77650041 | None:intergenic | 20.0% |
| !! | TTGAAGTTAGTATTAAAGTT+AGG | - | chr2_1:77650342-77650361 | None:intergenic | 20.0% |
| !! | AACTTTAATACTAACTTCAA+AGG | + | chr2_1:77650342-77650361 | Msa0227050:intron | 20.0% |
| !!! | AAATGTTTGCTTATTGTTTT+TGG | + | chr2_1:77650622-77650641 | Msa0227050:intron | 20.0% |
| !!! | TTTTGATGAATACATGAATT+TGG | + | chr2_1:77650732-77650751 | Msa0227050:CDS | 20.0% |
| !!! | ATTTGCTTTTACAAATTTCA+GGG | + | chr2_1:77651003-77651022 | Msa0227050:intron | 20.0% |
| !!! | AATATGAAATTTTTATGCAC+CGG | + | chr2_1:77651154-77651173 | Msa0227050:three_prime_UTR | 20.0% |
| !! | ATAACTGAAGGTTATTATAT+CGG | - | chr2_1:77651297-77651316 | None:intergenic | 20.0% |
| !! | GTAGGAATTTTTGTAAAGTT+AGG | + | chr2_1:77647211-77647230 | Msa0227050:five_prime_UTR | 25.0% |
| !! | AACAACTGACTTAGTATTAT+TGG | - | chr2_1:77647239-77647258 | Msa0227040:intron | 25.0% |
| ! | GTTGTTAAAGAGAAATTGAA+AGG | - | chr2_1:77647439-77647458 | Msa0227040:intron | 25.0% |
| !!! | CAAGTTCTGAGAAAAAAAAA+CGG | - | chr2_1:77647474-77647493 | Msa0227040:intron | 25.0% |
| !!! | TTTATGGCATGTTTTAGAAT+AGG | + | chr2_1:77647620-77647639 | Msa0227050:intron | 25.0% |
| !! | TGAATCTAGCTAATTTTACA+TGG | - | chr2_1:77647757-77647776 | Msa0227040:intron | 25.0% |
| !!! | TCGCAACATTTTGAAATTTA+GGG | - | chr2_1:77647849-77647868 | Msa0227040:intron | 25.0% |
| !!! | ATCGCAACATTTTGAAATTT+AGG | - | chr2_1:77647850-77647869 | Msa0227040:intron | 25.0% |
| !! | ATTTCAAAATGTTGCGATTT+TGG | + | chr2_1:77647852-77647871 | Msa0227050:intron | 25.0% |
| ! | AGACAATCATATATCATTTC+AGG | - | chr2_1:77647909-77647928 | Msa0227040:intron | 25.0% |
| ! | AATGATATATGATTGTCTTG+AGG | + | chr2_1:77647911-77647930 | Msa0227050:intron | 25.0% |
| ! | AATGAAAAGGAAAGAGATAA+AGG | - | chr2_1:77648175-77648194 | Msa0227040:CDS | 25.0% |
| ! | GAAACAAGAGATTAAAGAAA+AGG | - | chr2_1:77648227-77648246 | Msa0227040:CDS | 25.0% |
| !! | TAAAAAAGGGTATATTGATG+GGG | + | chr2_1:77648291-77648310 | Msa0227050:intron | 25.0% |
| !!! | CCCAAGAAACAAATTTTTTT+AGG | + | chr2_1:77648489-77648508 | Msa0227050:intron | 25.0% |
| !! | GCCTAAAAAAATTTGTTTCT+TGG | - | chr2_1:77648493-77648512 | None:intergenic | 25.0% |
| !!! | TGTTGTATTTGCTATATTGT+TGG | - | chr2_1:77648824-77648843 | None:intergenic | 25.0% |
| !!! | TTGTCTGTTTTTCTTTTTTG+TGG | + | chr2_1:77648920-77648939 | Msa0227050:intron | 25.0% |
| !!! | ATCGGTTTGTCATTTTAATT+TGG | - | chr2_1:77649118-77649137 | None:intergenic | 25.0% |
| !! | AGGTTTTCAGTTATTTAGAT+CGG | - | chr2_1:77649136-77649155 | None:intergenic | 25.0% |
| ! | TGATGTTCTTGTATGAAAAA+TGG | + | chr2_1:77649358-77649377 | Msa0227050:intron | 25.0% |
| ! | GATGTTCTTGTATGAAAAAT+GGG | + | chr2_1:77649359-77649378 | Msa0227050:intron | 25.0% |
| !!! | TCGCAACATTTTGAAATTTA+GGG | - | chr2_1:77647849-77647868 | Msa0227040:intron | 25.0% |
| !!! | ATCGCAACATTTTGAAATTT+AGG | - | chr2_1:77647850-77647869 | Msa0227040:intron | 25.0% |
| !! | ATTTCAAAATGTTGCGATTT+TGG | + | chr2_1:77647852-77647871 | Msa0227050:intron | 25.0% |
| !! | AATCTAGCTAATTTTATAGG+GGG | - | chr2_1:77649505-77649524 | None:intergenic | 25.0% |
| !! | GAATCTAGCTAATTTTATAG+GGG | - | chr2_1:77649506-77649525 | None:intergenic | 25.0% |
| !! | GTGAATCTAGCTAATTTTAT+AGG | - | chr2_1:77649508-77649527 | None:intergenic | 25.0% |
| ! | AGTTACTAGAAAATGAATGA+TGG | - | chr2_1:77649936-77649955 | None:intergenic | 25.0% |
| !! | GAATTTTGTATTTCAAACTG+AGG | + | chr2_1:77650364-77650383 | Msa0227050:intron | 25.0% |
| ! | AAGTGTAATATTTCTTAGAG+AGG | - | chr2_1:77650465-77650484 | None:intergenic | 25.0% |
| !!! | ATTCAAAGTTTTGGATAACA+TGG | - | chr2_1:77650527-77650546 | None:intergenic | 25.0% |
| !! | GAGATTCAAATTCAAAGTTT+TGG | - | chr2_1:77650536-77650555 | None:intergenic | 25.0% |
| ! | TTTCAAATTGGATATTTGAG+TGG | + | chr2_1:77650667-77650686 | Msa0227050:intron | 25.0% |
| !!! | TGAATACATGAATTTGGTTT+TGG | + | chr2_1:77650738-77650757 | Msa0227050:CDS | 25.0% |
| !!! | ATGATGTTATTGTTTTGATC+AGG | + | chr2_1:77650867-77650886 | Msa0227050:intron | 25.0% |
| !!! | TGATGTTATTGTTTTGATCA+GGG | + | chr2_1:77650868-77650887 | Msa0227050:intron | 25.0% |
| !!! | TGCATTTTCATCTATTTCTA+TGG | + | chr2_1:77650952-77650971 | Msa0227050:intron | 25.0% |
| !!! | GCATTTTCATCTATTTCTAT+GGG | + | chr2_1:77650953-77650972 | Msa0227050:intron | 25.0% |
| !!! | GATTTGCTTTTACAAATTTC+AGG | + | chr2_1:77651002-77651021 | Msa0227050:intron | 25.0% |
| !!! | TTTGCTTTTACAAATTTCAG+GGG | + | chr2_1:77651004-77651023 | Msa0227050:intron | 25.0% |
| ! | GAAATAGTAACAAACTGAAA+AGG | - | chr2_1:77651088-77651107 | None:intergenic | 25.0% |
| AATTCTTTCGCTCAATTTCT+AGG | + | chr2_1:77647290-77647309 | Msa0227050:five_prime_UTR | 30.0% | |
| ATTCTTTCGCTCAATTTCTA+GGG | + | chr2_1:77647291-77647310 | Msa0227050:five_prime_UTR | 30.0% | |
| GAGAAAAAAAAACGGAGATT+AGG | - | chr2_1:77647466-77647485 | Msa0227040:intron | 30.0% | |
| !! | TTTTTGAGCAAAAGGATTTG+AGG | + | chr2_1:77647537-77647556 | Msa0227050:CDS | 30.0% |
| TTTGATACCTAGAGTTATTG+AGG | - | chr2_1:77647705-77647724 | Msa0227040:intron | 30.0% | |
| GGAGCATAATGGTTATTTAT+TGG | + | chr2_1:77647804-77647823 | Msa0227050:intron | 30.0% | |
| !!! | GCAACATTTTGAAATTTAGG+GGG | - | chr2_1:77647847-77647866 | Msa0227040:intron | 30.0% |
| !!! | CGCAACATTTTGAAATTTAG+GGG | - | chr2_1:77647848-77647867 | Msa0227040:intron | 30.0% |
| !! | TGTGTGAAAGTTTTAATAGG+GGG | - | chr2_1:77647878-77647897 | Msa0227040:intron | 30.0% |
| !! | GTGTGTGAAAGTTTTAATAG+GGG | - | chr2_1:77647879-77647898 | Msa0227040:intron | 30.0% |
| !! | CGTGTGTGAAAGTTTTAATA+GGG | - | chr2_1:77647880-77647899 | Msa0227040:intron | 30.0% |
| !! | ACGTGTGTGAAAGTTTTAAT+AGG | - | chr2_1:77647881-77647900 | Msa0227040:intron | 30.0% |
| TGGTTGTTTAATTATGGAGT+TGG | - | chr2_1:77648004-77648023 | Msa0227040:intron | 30.0% | |
| ! | ATATGGTTTAGTGCCATTAA+TGG | + | chr2_1:77648127-77648146 | Msa0227050:intron | 30.0% |
| GAATAACCAAACACCATTAA+TGG | - | chr2_1:77648143-77648162 | Msa0227040:CDS | 30.0% | |
| ! | TCTGCATTGTTATTCTATTG+CGG | + | chr2_1:77648245-77648264 | Msa0227050:intron | 30.0% |
| GCAATAAAAATGACGAACAA+GGG | - | chr2_1:77648693-77648712 | None:intergenic | 30.0% | |
| TGCAATAAAAATGACGAACA+AGG | - | chr2_1:77648694-77648713 | None:intergenic | 30.0% | |
| !! | TCTGTTTTTCTTTTTTGTGG+TGG | + | chr2_1:77648923-77648942 | Msa0227050:intron | 30.0% |
| TGCAGTATATATGTAAGATC+CGG | - | chr2_1:77648966-77648985 | None:intergenic | 30.0% | |
| CATACTAGTACAAAATACGT+AGG | - | chr2_1:77649311-77649330 | None:intergenic | 30.0% | |
| GGAGCATAATGGTTATTTAT+TGG | + | chr2_1:77647804-77647823 | Msa0227050:intron | 30.0% | |
| !!! | GCAACATTTTGAAATTTAGG+GGG | - | chr2_1:77647847-77647866 | Msa0227040:intron | 30.0% |
| !!! | CGCAACATTTTGAAATTTAG+GGG | - | chr2_1:77647848-77647867 | Msa0227040:intron | 30.0% |
| !!! | CCATTGTTTTAAACATGTCT+CGG | - | chr2_1:77649582-77649601 | None:intergenic | 30.0% |
| ! | ATAGTGTTTTGCACAATACA+AGG | - | chr2_1:77649662-77649681 | None:intergenic | 30.0% |
| !! | GTTTGTTGATGGTTTACATT+GGG | - | chr2_1:77649731-77649750 | None:intergenic | 30.0% |
| ACTAGAAAATGAATGATGGT+TGG | - | chr2_1:77649932-77649951 | None:intergenic | 30.0% | |
| ! | AACCTTGTAGTTTATCGATT+TGG | + | chr2_1:77649959-77649978 | Msa0227050:intron | 30.0% |
| TTCCAAATCGATAAACTACA+AGG | - | chr2_1:77649964-77649983 | None:intergenic | 30.0% | |
| AGTTATTTGGATTCTGATTC+TGG | + | chr2_1:77650090-77650109 | Msa0227050:intron | 30.0% | |
| !! | TGTCTTATTTGTGGATGTTA+GGG | + | chr2_1:77650226-77650245 | Msa0227050:intron | 30.0% |
| AATTTCAGATCATCTCTTCT+AGG | - | chr2_1:77650270-77650289 | None:intergenic | 30.0% | |
| TTCTTATCTCTTCTTTCAGA+GGG | - | chr2_1:77650412-77650431 | None:intergenic | 30.0% | |
| TTTCTTATCTCTTCTTTCAG+AGG | - | chr2_1:77650413-77650432 | None:intergenic | 30.0% | |
| !!! | AGTTTTGGATAACATGGATT+TGG | - | chr2_1:77650521-77650540 | None:intergenic | 30.0% |
| TTTGTCTCTTTCAACAGTTT+AGG | + | chr2_1:77650557-77650576 | Msa0227050:intron | 30.0% | |
| ATTCATGAGCTCATTTCTTA+GGG | + | chr2_1:77650597-77650616 | Msa0227050:intron | 30.0% | |
| !! | TTTTTGGTATAGAGTGTACA+TGG | + | chr2_1:77650638-77650657 | Msa0227050:intron | 30.0% |
| ACATGGTACTCATTTCAAAT+TGG | + | chr2_1:77650655-77650674 | Msa0227050:intron | 30.0% | |
| AAATTGGATATTTGAGTGGT+TGG | + | chr2_1:77650671-77650690 | Msa0227050:intron | 30.0% | |
| ! | TTATGTTGTCTCCTTTAAGA+AGG | - | chr2_1:77650899-77650918 | None:intergenic | 30.0% |
| CTGAAAAGGTAGTGATAAAT+CGG | - | chr2_1:77651074-77651093 | None:intergenic | 30.0% | |
| !! | GTGTTTGAGAAGTATTATGT+TGG | + | chr2_1:77651130-77651149 | Msa0227050:three_prime_UTR | 30.0% |
| !! | TATTATATCGGTGTTACAGT+TGG | - | chr2_1:77651285-77651304 | None:intergenic | 30.0% |
| AATAACCTTCAGTTATGTAG+AGG | + | chr2_1:77651301-77651320 | Msa0227050:three_prime_UTR | 30.0% | |
| ! | TTTTCTGTCGTCAATTTTGA+TGG | + | chr2_1:77651346-77651365 | Msa0227050:three_prime_UTR | 30.0% |
| !! | TTTCTGTCGTCAATTTTGAT+GGG | + | chr2_1:77651347-77651366 | Msa0227050:three_prime_UTR | 30.0% |
| ! | GTGATGAGAAAGCATACAAT+GGG | - | chr2_1:77647408-77647427 | Msa0227040:intron | 35.0% |
| ! | AGTGATGAGAAAGCATACAA+TGG | - | chr2_1:77647409-77647428 | Msa0227040:intron | 35.0% |
| !!! | GATTTGGCTTTTTGAGCAAA+AGG | + | chr2_1:77647529-77647548 | Msa0227050:CDS | 35.0% |
| CAAAAGGATTTGAGGATTGA+AGG | + | chr2_1:77647545-77647564 | Msa0227050:CDS | 35.0% | |
| !!! | ATGGCATGTTTTAGAATAGG+AGG | + | chr2_1:77647623-77647642 | Msa0227050:intron | 35.0% |
| ! | GTCACTATGCTTTTCAATCT+CGG | + | chr2_1:77647656-77647675 | Msa0227050:intron | 35.0% |
| !! | TTATGGAGTTGGTATTCACT+TGG | - | chr2_1:77647993-77648012 | Msa0227040:intron | 35.0% |
| GGTGCTTGGTTGTTTAATTA+TGG | - | chr2_1:77648010-77648029 | Msa0227040:intron | 35.0% | |
| !!! | TTTTGGATTTTGAAGGTGCT+TGG | - | chr2_1:77648024-77648043 | Msa0227040:intron | 35.0% |
| !!! | CCTCAAGTTTTGGATTTTGA+AGG | - | chr2_1:77648031-77648050 | Msa0227040:CDS | 35.0% |
| CCTTCAAAATCCAAAACTTG+AGG | + | chr2_1:77648028-77648047 | Msa0227050:intron | 35.0% | |
| !!! | ACTTTTACACAAAGGTGTTG+GGG | - | chr2_1:77648072-77648091 | Msa0227040:CDS | 35.0% |
| !!! | GACTTTTACACAAAGGTGTT+GGG | - | chr2_1:77648073-77648092 | Msa0227040:CDS | 35.0% |
| !! | AGACTTTTACACAAAGGTGT+TGG | - | chr2_1:77648074-77648093 | Msa0227040:CDS | 35.0% |
| CACCTTTGTGTAAAAGTCTA+TGG | + | chr2_1:77648075-77648094 | Msa0227050:intron | 35.0% | |
| ! | GTCCATAGACTTTTACACAA+AGG | - | chr2_1:77648080-77648099 | Msa0227040:CDS | 35.0% |
| TGGCACTAAACCATATTTCA+AGG | - | chr2_1:77648123-77648142 | Msa0227040:CDS | 35.0% | |
| ! | TTAGTGCCATTAATGGTGTT+TGG | + | chr2_1:77648134-77648153 | Msa0227050:intron | 35.0% |
| TGGTGTTTGGTTATTCTCTT+CGG | + | chr2_1:77648147-77648166 | Msa0227050:intron | 35.0% | |
| TAAAGACGCAATATTCGATC+TGG | + | chr2_1:77648405-77648424 | Msa0227050:intron | 35.0% | |
| !!! | CAATAAGCTGTTTTTGCATG+CGG | + | chr2_1:77648455-77648474 | Msa0227050:intron | 35.0% |
| ACCGATTAAGCAAGCTAAAA+AGG | + | chr2_1:77648544-77648563 | Msa0227050:intron | 35.0% | |
| !!! | CCCTTTTTAGCTTGCTTAAT+CGG | - | chr2_1:77648548-77648567 | None:intergenic | 35.0% |
| CCGATTAAGCAAGCTAAAAA+GGG | + | chr2_1:77648545-77648564 | Msa0227050:intron | 35.0% | |
| !! | GTTTTTCTTTTTTGTGGTGG+TGG | + | chr2_1:77648926-77648945 | Msa0227050:intron | 35.0% |
| CAGTATATATGTAAGATCCG+GGG | - | chr2_1:77648964-77648983 | None:intergenic | 35.0% | |
| GCAGTATATATGTAAGATCC+GGG | - | chr2_1:77648965-77648984 | None:intergenic | 35.0% | |
| !! | GTGAGCTTAGTTTGTTGATA+TGG | - | chr2_1:77648993-77649012 | None:intergenic | 35.0% |
| ATCAACAAACTAAGCTCACA+AGG | + | chr2_1:77648994-77649013 | Msa0227050:intron | 35.0% | |
| ! | CCGAGACATGTTTAAAACAA+TGG | + | chr2_1:77649579-77649598 | Msa0227050:intron | 35.0% |
| ! | GTTTGTTAAGAAACCCCAAA+TGG | + | chr2_1:77649611-77649630 | Msa0227050:intron | 35.0% |
| !! | CGTTTGTTGATGGTTTACAT+TGG | - | chr2_1:77649732-77649751 | None:intergenic | 35.0% |
| ATGTAAACCATCAACAAACG+AGG | + | chr2_1:77649732-77649751 | Msa0227050:intron | 35.0% | |
| ! | ATTCACCAAGTTAGTCTGTT+AGG | - | chr2_1:77649851-77649870 | None:intergenic | 35.0% |
| ATAAACTACAAGGCTGAGTT+GGG | - | chr2_1:77649877-77649896 | None:intergenic | 35.0% | |
| AATAAACTACAAGGCTGAGT+TGG | - | chr2_1:77649878-77649897 | None:intergenic | 35.0% | |
| GAATTCTGATGCTATGATTG+TGG | + | chr2_1:77650055-77650074 | Msa0227050:intron | 35.0% | |
| GATTCGTTGCTCTAGTTATT+TGG | + | chr2_1:77650077-77650096 | Msa0227050:intron | 35.0% | |
| AATCCTAAGTTTATGAGCTG+GGG | - | chr2_1:77650182-77650201 | None:intergenic | 35.0% | |
| CAATCCTAAGTTTATGAGCT+GGG | - | chr2_1:77650183-77650202 | None:intergenic | 35.0% | |
| !!! | TAGGATTGGTGGTTAGTTTT+TGG | + | chr2_1:77650195-77650214 | Msa0227050:intron | 35.0% |
| !!! | AGGATTGGTGGTTAGTTTTT+GGG | + | chr2_1:77650196-77650215 | Msa0227050:intron | 35.0% |
| !! | CTGTCTTATTTGTGGATGTT+AGG | + | chr2_1:77650225-77650244 | Msa0227050:intron | 35.0% |
| ATCAACCACTGTATAGACTA+TGG | + | chr2_1:77650293-77650312 | Msa0227050:intron | 35.0% | |
| TCTTATCTCTTCTTTCAGAG+GGG | - | chr2_1:77650411-77650430 | None:intergenic | 35.0% | |
| TGCACTGTCTACATTTATCT+TGG | + | chr2_1:77650495-77650514 | Msa0227050:intron | 35.0% | |
| GATTCATGAGCTCATTTCTT+AGG | + | chr2_1:77650596-77650615 | Msa0227050:intron | 35.0% | |
| TTCATGAGCTCATTTCTTAG+GGG | + | chr2_1:77650598-77650617 | Msa0227050:intron | 35.0% | |
| ! | GATATTTGAGTGGTTGGTTA+AGG | + | chr2_1:77650677-77650696 | Msa0227050:intron | 35.0% |
| AAGAAGAGCAAAAAGACACT+AGG | + | chr2_1:77650787-77650806 | Msa0227050:CDS | 35.0% | |
| CAGAAAATGCATATGTTGCA+AGG | - | chr2_1:77650846-77650865 | None:intergenic | 35.0% | |
| !!! | TGTTATTGTTTTGATCAGGG+AGG | + | chr2_1:77650871-77650890 | Msa0227050:intron | 35.0% |
| ACAAATTTCAGGGGTAAATG+AGG | + | chr2_1:77651013-77651032 | Msa0227050:intron | 35.0% | |
| TCTTGTCAACATGTTGAACA+TGG | + | chr2_1:77651108-77651127 | Msa0227050:three_prime_UTR | 35.0% | |
| ! | AACAAACCAAAGCATTTGTC+CGG | - | chr2_1:77651176-77651195 | None:intergenic | 35.0% |
| AAGAACCTCTACATAACTGA+AGG | - | chr2_1:77651309-77651328 | None:intergenic | 35.0% | |
| ! | GAGAAAGCATACAATGGGTT+GGG | - | chr2_1:77647403-77647422 | Msa0227040:intron | 40.0% |
| ! | TGAGAAAGCATACAATGGGT+TGG | - | chr2_1:77647404-77647423 | Msa0227040:intron | 40.0% |
| GATTTCTTCAAAGCAAAGCG+CGG | + | chr2_1:77647501-77647520 | Msa0227050:CDS | 40.0% | |
| TCATGTGCCTCAATAACTCT+AGG | + | chr2_1:77647695-77647714 | Msa0227050:intron | 40.0% | |
| ! | TGAACATGTCTGGAGCATAA+TGG | + | chr2_1:77647793-77647812 | Msa0227050:intron | 40.0% |
| AGGCAATTTGTGTTCCTCTT+TGG | + | chr2_1:77647961-77647980 | Msa0227050:intron | 40.0% | |
| !!! | TGGGGTTTGTTTTGATTGAG+AGG | - | chr2_1:77648054-77648073 | Msa0227040:CDS | 40.0% |
| ! | CTCTGCATAGCCTTGAAATA+TGG | + | chr2_1:77648110-77648129 | Msa0227050:intron | 40.0% |
| ! | AAAAGGGTATATTGATGGGG+TGG | + | chr2_1:77648294-77648313 | Msa0227050:intron | 40.0% |
| TATTGATGGGGTGGTGAAAA+TGG | + | chr2_1:77648303-77648322 | Msa0227050:intron | 40.0% | |
| ATTGATGGGGTGGTGAAAAT+GGG | + | chr2_1:77648304-77648323 | Msa0227050:intron | 40.0% | |
| TGGGAAAGAGGAAAAATGCA+TGG | + | chr2_1:77648323-77648342 | Msa0227050:intron | 40.0% | |
| AAATGCATGGATTTGACACG+TGG | + | chr2_1:77648336-77648355 | Msa0227050:intron | 40.0% | |
| ! | TGAACATGTCTGGAGCATAA+TGG | + | chr2_1:77647793-77647812 | Msa0227050:intron | 40.0% |
| ! | TGAACATGTCTGGAGCATAA+TGG | + | chr2_1:77647793-77647812 | Msa0227050:intron | 40.0% |
| ! | CAATACAAGGCATTACCCTT+CGG | - | chr2_1:77649649-77649668 | None:intergenic | 40.0% |
| GAGTGCTACAACTGTAAGAT+AGG | - | chr2_1:77649685-77649704 | None:intergenic | 40.0% | |
| ! | ACATACACCTCGTTTGTTGA+TGG | - | chr2_1:77649742-77649761 | None:intergenic | 40.0% |
| TAAGTTATGCTGGGAGCTAT+GGG | - | chr2_1:77649781-77649800 | None:intergenic | 40.0% | |
| TTAAGTTATGCTGGGAGCTA+TGG | - | chr2_1:77649782-77649801 | None:intergenic | 40.0% | |
| TGAATAAGCCCATTATTGCG+AGG | + | chr2_1:77649820-77649839 | Msa0227050:intron | 40.0% | |
| TTGCACCTAACAGACTAACT+TGG | + | chr2_1:77649843-77649862 | Msa0227050:intron | 40.0% | |
| GACTTGGCGAATAAACTACA+AGG | - | chr2_1:77649887-77649906 | None:intergenic | 40.0% | |
| AAATGAATGATGGTTGGACG+AGG | - | chr2_1:77649926-77649945 | None:intergenic | 40.0% | |
| ! | ATTCTGATTCTGGTTAGACC+AGG | + | chr2_1:77650100-77650119 | Msa0227050:intron | 40.0% |
| CCAATCCTAAGTTTATGAGC+TGG | - | chr2_1:77650184-77650203 | None:intergenic | 40.0% | |
| CCAGCTCATAAACTTAGGAT+TGG | + | chr2_1:77650181-77650200 | Msa0227050:intron | 40.0% | |
| GCTCATAAACTTAGGATTGG+TGG | + | chr2_1:77650184-77650203 | Msa0227050:intron | 40.0% | |
| !!! | GGATTGGTGGTTAGTTTTTG+GGG | + | chr2_1:77650197-77650216 | Msa0227050:intron | 40.0% |
| AACCACTGTATAGACTATGG+AGG | + | chr2_1:77650296-77650315 | Msa0227050:intron | 40.0% | |
| !! | GGACAAATGCTTTGGTTTGT+TGG | + | chr2_1:77651175-77651194 | Msa0227050:three_prime_UTR | 40.0% |
| TGGAGTCTAGGCATTAATAC+AGG | - | chr2_1:77651259-77651278 | None:intergenic | 40.0% | |
| !!! | TACAGTTGGTTTTGGAGTCT+AGG | - | chr2_1:77651271-77651290 | None:intergenic | 40.0% |
| !!! | ATCGGTGTTACAGTTGGTTT+TGG | - | chr2_1:77651279-77651298 | None:intergenic | 40.0% |
| GGTCATGACCCTTTGAACTT+TGG | - | chr2_1:77647382-77647401 | Msa0227040:intron | 45.0% | |
| TAGCTAGATTCACGAGCTTG+AGG | + | chr2_1:77647765-77647784 | Msa0227050:intron | 45.0% | |
| TGAGGACGATTGAACATGTC+TGG | + | chr2_1:77647783-77647802 | Msa0227050:intron | 45.0% | |
| TCCAAGTCATGTTGAGCATC+AGG | + | chr2_1:77647935-77647954 | Msa0227050:intron | 45.0% | |
| ACCTGATGCTCAACATGACT+TGG | - | chr2_1:77647939-77647958 | Msa0227040:intron | 45.0% | |
| TCATGTTGAGCATCAGGTGA+AGG | + | chr2_1:77647941-77647960 | Msa0227050:intron | 45.0% | |
| ! | GATTGAGAGGCCTCAAGTTT+TGG | - | chr2_1:77648041-77648060 | Msa0227040:CDS | 45.0% |
| AAGGCTATGCAGAGATGTGA+AGG | - | chr2_1:77648104-77648123 | Msa0227040:CDS | 45.0% | |
| GTATACGTGTGCGAATGTGT+TGG | + | chr2_1:77648381-77648400 | Msa0227050:intron | 45.0% | |
| GCTCATATTAACCGCATCTG+TGG | + | chr2_1:77648511-77648530 | Msa0227050:intron | 45.0% | |
| !!! | TTCTTTTTTGTGGTGGTGGC+CGG | + | chr2_1:77648930-77648949 | Msa0227050:intron | 45.0% |
| TGAGGACGATTGAACATGTC+TGG | + | chr2_1:77647783-77647802 | Msa0227050:intron | 45.0% | |
| TAGCTAGATTCACGAGCTTG+AGG | + | chr2_1:77647765-77647784 | Msa0227050:intron | 45.0% | |
| TGAGGACGATTGAACATGTC+TGG | + | chr2_1:77647783-77647802 | Msa0227050:intron | 45.0% | |
| GATGGTTTACATTGGGCTGT+TGG | - | chr2_1:77649724-77649743 | None:intergenic | 45.0% | |
| AACGAGGTGTATGTGTTGTC+TGG | + | chr2_1:77649748-77649767 | Msa0227050:intron | 45.0% | |
| AAGTTATGCTGGGAGCTATG+GGG | - | chr2_1:77649780-77649799 | None:intergenic | 45.0% | |
| AGGTGCAACCTCGCAATAAT+GGG | - | chr2_1:77649831-77649850 | None:intergenic | 45.0% | |
| TAGGTGCAACCTCGCAATAA+TGG | - | chr2_1:77649832-77649851 | None:intergenic | 45.0% | |
| TTATGCTGTTGTTGTGTGCC+AGG | + | chr2_1:77649989-77650008 | Msa0227050:intron | 45.0% | |
| CAAAAGACAGGTTCACAACC+TGG | - | chr2_1:77650010-77650029 | None:intergenic | 45.0% | |
| ! | CAGGTTGTGAACCTGTCTTT+TGG | + | chr2_1:77650008-77650027 | Msa0227050:intron | 45.0% |
| CTAAGTTTATGAGCTGGGGT+GGG | - | chr2_1:77650178-77650197 | None:intergenic | 45.0% | |
| !! | GGGTTCAGCTGTCTTATTTG+TGG | + | chr2_1:77650217-77650236 | Msa0227050:intron | 45.0% |
| TGCCTCCATAGTCTATACAG+TGG | - | chr2_1:77650301-77650320 | None:intergenic | 45.0% | |
| TCAGGGAGGATCCTTCTTAA+AGG | + | chr2_1:77650885-77650904 | Msa0227050:intron | 45.0% | |
| TCTTGTTGAGTGGAACCATG+TGG | - | chr2_1:77651048-77651067 | None:intergenic | 45.0% | |
| CATGGTTCCACTCAACAAGA+AGG | + | chr2_1:77651048-77651067 | Msa0227050:three_prime_UTR | 45.0% | |
| AAATCGGCCTTCTTGTTGAG+TGG | - | chr2_1:77651058-77651077 | None:intergenic | 45.0% | |
| TATGCACCGGACAAATGCTT+TGG | + | chr2_1:77651167-77651186 | Msa0227050:three_prime_UTR | 45.0% | |
| !!! | AAAATTTTGATTAAAATTAT+AGG | + | chr2_1:77648740-77648759 | Msa0227050:intron | 5.0% |
| !! | AATATATACTATATATAAAA+AGG | - | chr2_1:77649086-77649105 | None:intergenic | 5.0% |
| !! | TTGAACTTTGGTGCTCGCCA+TGG | - | chr2_1:77647370-77647389 | Msa0227040:intron | 50.0% |
| TGGCGAGCACCAAAGTTCAA+AGG | + | chr2_1:77647370-77647389 | Msa0227050:CDS | 50.0% | |
| GGCGAGCACCAAAGTTCAAA+GGG | + | chr2_1:77647371-77647390 | Msa0227050:CDS | 50.0% | |
| GCAAAGCGCGGATTCAGATT+TGG | + | chr2_1:77647513-77647532 | Msa0227050:CDS | 50.0% | |
| !! | TCACTTGGTGCAGTCCAAAG+AGG | - | chr2_1:77647978-77647997 | Msa0227040:intron | 50.0% |
| GGGTGGTGAAAATGGGAAAG+AGG | + | chr2_1:77648311-77648330 | Msa0227050:intron | 50.0% | |
| CGCAATATTCGATCTGGACG+AGG | + | chr2_1:77648411-77648430 | Msa0227050:intron | 50.0% | |
| !!! | TCTTTTTTGTGGTGGTGGCC+GGG | + | chr2_1:77648931-77648950 | Msa0227050:intron | 50.0% |
| ! | GCTCGTGAATCTAGCTCAAG+AGG | - | chr2_1:77649389-77649408 | None:intergenic | 50.0% |
| GAGCTAGATTCACGAGCTTG+AGG | + | chr2_1:77649392-77649411 | Msa0227050:intron | 50.0% | |
| ! | GCTGTTGCATCTGCCATTTG+GGG | - | chr2_1:77649627-77649646 | None:intergenic | 50.0% |
| ! | GGCTGTTGCATCTGCCATTT+GGG | - | chr2_1:77649628-77649647 | None:intergenic | 50.0% |
| TGGGCTGTTGGATGCATACA+TGG | - | chr2_1:77649712-77649731 | None:intergenic | 50.0% | |
| ATTCGCCAAGTCAGCCTGTT+AGG | + | chr2_1:77649895-77649914 | Msa0227050:intron | 50.0% | |
| TTGCACCTAACAGGCTGACT+TGG | - | chr2_1:77649903-77649922 | None:intergenic | 50.0% | |
| TAGTCTGGTCTGGTTAGACC+AGG | + | chr2_1:77650139-77650158 | Msa0227050:intron | 50.0% | |
| CCTAAGTTTATGAGCTGGGG+TGG | - | chr2_1:77650179-77650198 | None:intergenic | 50.0% | |
| CCACCCCAGCTCATAAACTT+AGG | + | chr2_1:77650176-77650195 | Msa0227050:intron | 50.0% | |
| GTGTGCGGACGATGAAGGTT+TGG | - | chr2_1:77647335-77647354 | Msa0227040:intron | 55.0% | |
| TCGATCTGGACGAGGTTGCT+TGG | + | chr2_1:77648419-77648438 | Msa0227050:intron | 55.0% | |
| AACCGCATCTGTGGCAGTGA+TGG | + | chr2_1:77648520-77648539 | Msa0227050:intron | 55.0% | |
| TGCCATCACTGCCACAGATG+CGG | - | chr2_1:77648525-77648544 | None:intergenic | 55.0% | |
| !!! | CTTTTTTGTGGTGGTGGCCG+GGG | + | chr2_1:77648932-77648951 | Msa0227050:intron | 55.0% |
| CGGCTGTTGCATCTGCCATT+TGG | - | chr2_1:77649629-77649648 | None:intergenic | 55.0% | |
| ATGGCAGATGCAACAGCCGA+AGG | + | chr2_1:77649630-77649649 | Msa0227050:intron | 55.0% | |
| TGGCAGATGCAACAGCCGAA+GGG | + | chr2_1:77649631-77649650 | Msa0227050:intron | 55.0% | |
| TGGACGAGGTTGCACCTAAC+AGG | - | chr2_1:77649912-77649931 | None:intergenic | 55.0% | |
| AGACCAGACTAGAGCAGACC+TGG | - | chr2_1:77650130-77650149 | None:intergenic | 55.0% | |
| AGGTCTGCTCTAGTCTGGTC+TGG | + | chr2_1:77650129-77650148 | Msa0227050:intron | 55.0% | |
| ATGAGGATGAGCACGCCACA+TGG | + | chr2_1:77651030-77651049 | Msa0227050:exon | 55.0% | |
| ! | TGAGGGTGTGCGGACGATGA+AGG | - | chr2_1:77647340-77647359 | Msa0227040:intron | 60.0% |
| ! | TGGAAGCAGGTGAGGGTGTG+CGG | - | chr2_1:77647350-77647369 | Msa0227040:intron | 60.0% |
| CACACCCTCACCTGCTTCCA+TGG | + | chr2_1:77647350-77647369 | Msa0227050:exon | 60.0% | |
| CTCGCCATGGAAGCAGGTGA+GGG | - | chr2_1:77647357-77647376 | Msa0227040:intron | 60.0% | |
| ! | TTGGTGCTCGCCATGGAAGC+AGG | - | chr2_1:77647363-77647382 | Msa0227040:intron | 60.0% |
| AAGATCCGGGGTTCGAACCC+CGG | - | chr2_1:77648952-77648971 | None:intergenic | 60.0% | |
| CAGACTAGAGCAGACCTGGC+TGG | - | chr2_1:77650126-77650145 | None:intergenic | 60.0% | |
| CAGCCAGGTCTGCTCTAGTC+TGG | + | chr2_1:77650124-77650143 | Msa0227050:intron | 60.0% | |
| GCTCGCCATGGAAGCAGGTG+AGG | - | chr2_1:77647358-77647377 | Msa0227040:intron | 65.0% | |
| CTGGTTAGACCAGGCCAGCC+AGG | + | chr2_1:77650109-77650128 | Msa0227050:intron | 65.0% | |
| ! | TAGAGCAGACCTGGCTGGCC+TGG | - | chr2_1:77650121-77650140 | None:intergenic | 65.0% |
| TGAGCTGGGGTGGGCAGACG+TGG | - | chr2_1:77650169-77650188 | None:intergenic | 70.0% | |
| GGTGGCCGGGGTTCGAACCC+CGG | + | chr2_1:77648944-77648963 | Msa0227050:intron | 75.0% | |
| ! | GTGGGCAGACGTGGCTGGCC+TGG | - | chr2_1:77650160-77650179 | None:intergenic | 75.0% |
| CTGGGGTGGGCAGACGTGGC+TGG | - | chr2_1:77650165-77650184 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 77647165 | 77651378 | 77647165 | ID=Msa0227050;Name=Msa0227050 |
| chr2_1 | mRNA | 77647165 | 77651378 | 77647165 | ID=Msa0227050-mRNA-1;Parent=Msa0227050;Name=Msa0227050-mRNA-1;_AED=0.06;_eAED=0.06;_QI=204|1|1|1|0.5|0.6|5|345|88 |
| chr2_1 | exon | 77647165 | 77647410 | 77647165 | ID=Msa0227050-mRNA-1:exon:23630;Parent=Msa0227050-mRNA-1 |
| chr2_1 | exon | 77647488 | 77647577 | 77647488 | ID=Msa0227050-mRNA-1:exon:23631;Parent=Msa0227050-mRNA-1 |
| chr2_1 | exon | 77650730 | 77650808 | 77650730 | ID=Msa0227050-mRNA-1:exon:23632;Parent=Msa0227050-mRNA-1 |
| chr2_1 | exon | 77650889 | 77650934 | 77650889 | ID=Msa0227050-mRNA-1:exon:23633;Parent=Msa0227050-mRNA-1 |
| chr2_1 | exon | 77651024 | 77651378 | 77651024 | ID=Msa0227050-mRNA-1:exon:23634;Parent=Msa0227050-mRNA-1 |
| chr2_1 | five_prime_UTR | 77647165 | 77647368 | 77647165 | ID=Msa0227050-mRNA-1:five_prime_utr;Parent=Msa0227050-mRNA-1 |
| chr2_1 | CDS | 77647369 | 77647410 | 77647369 | ID=Msa0227050-mRNA-1:cds;Parent=Msa0227050-mRNA-1 |
| chr2_1 | CDS | 77647488 | 77647577 | 77647488 | ID=Msa0227050-mRNA-1:cds;Parent=Msa0227050-mRNA-1 |
| chr2_1 | CDS | 77650730 | 77650808 | 77650730 | ID=Msa0227050-mRNA-1:cds;Parent=Msa0227050-mRNA-1 |
| chr2_1 | CDS | 77650889 | 77650934 | 77650889 | ID=Msa0227050-mRNA-1:cds;Parent=Msa0227050-mRNA-1 |
| chr2_1 | CDS | 77651024 | 77651033 | 77651024 | ID=Msa0227050-mRNA-1:cds;Parent=Msa0227050-mRNA-1 |
| chr2_1 | three_prime_UTR | 77651034 | 77651378 | 77651034 | ID=Msa0227050-mRNA-1:three_prime_utr;Parent=Msa0227050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
