Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259850 | XP_003597961.1 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 3.97e-56 | 177 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259850 | sp|A1XQR9|RUXE_PIG | 72.840 | 81 | 22 | 0 | 3 | 83 | 7 | 87 | 1.57e-40 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259850 | G7IMA2 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 1.90e-56 | 177 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0227050 | Msa0259850 | 0.875242 | 3.595607e-68 | -8.615850e-47 |
| Msa0259850 | Msa0305350 | 0.828690 | 7.814555e-55 | -8.615850e-47 |
| Msa0259850 | Msa0691760 | 0.804202 | 2.418696e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259850 | MtrunA17_Chr2g0333491 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 3.66e-60 | 177 |
| Msa0259850 | MtrunA17_Chr5g0431231 | 100.000 | 88 | 0 | 0 | 1 | 88 | 1 | 88 | 3.66e-60 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259850 | AT4G30330.1 | 89.773 | 88 | 9 | 0 | 1 | 88 | 1 | 88 | 4.65e-55 | 165 |
| Msa0259850 | AT2G18740.1 | 89.773 | 88 | 9 | 0 | 1 | 88 | 1 | 88 | 6.18e-55 | 165 |
| Msa0259850 | AT2G18740.2 | 87.324 | 71 | 9 | 0 | 1 | 71 | 1 | 71 | 2.64e-42 | 133 |
Find 41 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTGACTTAGTATTAT+TGG | 0.147663 | 2_2:+57209586 | Msa0259860:intron |
| AATTCTTTCGCTCAATTTCT+AGG | 0.208973 | 2_2:-57209532 | Msa0259850:five_prime_UTR |
| ATCGGTGTTACAGTTGGTTT+TGG | 0.276706 | 2_2:+57205561 | None:intergenic |
| TGAATACATGAATTTGGTTT+TGG | 0.297744 | 2_2:-57206097 | Msa0259850:CDS |
| TCAGGGAGGATCCTTCTTAA+AGG | 0.324647 | 2_2:-57205950 | Msa0259850:intron |
| GCAAAGCGCGGATTCAGATT+TGG | 0.362553 | 2_2:-57209308 | Msa0259850:CDS |
| CTGAAAAGGTAGTGATAAAT+CGG | 0.379052 | 2_2:+57205764 | None:intergenic |
| CACACCCTCACCTGCTTCCA+TGG | 0.399962 | 2_2:-57209472 | Msa0259850:exon |
| CAAAAGGATTTGAGGATTGA+AGG | 0.404712 | 2_2:-57209276 | Msa0259850:CDS |
| GGACAAATGCTTTGGTTTGT+TGG | 0.411244 | 2_2:-57205660 | Msa0259850:three_prime_UTR |
| ATAACTGAAGGTTATTATAT+CGG | 0.427501 | 2_2:+57205543 | None:intergenic |
| TATGCACCGGACAAATGCTT+TGG | 0.449243 | 2_2:-57205668 | Msa0259850:three_prime_UTR |
| GGTCATGACCCTTTGAACTT+TGG | 0.450628 | 2_2:+57209443 | Msa0259860:intron |
| GTGTGCGGACGATGAAGGTT+TGG | 0.458492 | 2_2:+57209490 | Msa0259860:intron |
| TTATGTTGTCTCCTTTAAGA+AGG | 0.459912 | 2_2:+57205939 | None:intergenic |
| TGGAGTCTAGGCATTAATAC+AGG | 0.462291 | 2_2:+57205581 | None:intergenic |
| ACAAATTTCAGGGGTAAATG+AGG | 0.483171 | 2_2:-57205822 | Msa0259850:intron |
| GAGAAAGCATACAATGGGTT+GGG | 0.488064 | 2_2:+57209422 | Msa0259860:intron |
| AACAAACCAAAGCATTTGTC+CGG | 0.491794 | 2_2:+57205662 | None:intergenic |
| TTGGTGCTCGCCATGGAAGC+AGG | 0.496835 | 2_2:+57209462 | Msa0259860:intron |
| ATTCTTTCGCTCAATTTCTA+GGG | 0.497920 | 2_2:-57209531 | Msa0259850:five_prime_UTR |
| AAGTTGATATTAATACTTGT+AGG | 0.500713 | 2_2:-57209629 | Msa0259850:five_prime_UTR |
| GAAATAGTAACAAACTGAAA+AGG | 0.510259 | 2_2:+57205750 | None:intergenic |
| GGCGAGCACCAAAGTTCAAA+GGG | 0.524848 | 2_2:-57209451 | Msa0259850:CDS |
| TTGAACTTTGGTGCTCGCCA+TGG | 0.529943 | 2_2:+57209455 | Msa0259860:intron |
| GCTCGCCATGGAAGCAGGTG+AGG | 0.536688 | 2_2:+57209467 | Msa0259860:intron |
| TGAGGGTGTGCGGACGATGA+AGG | 0.546987 | 2_2:+57209485 | Msa0259860:intron |
| TGAGAAAGCATACAATGGGT+TGG | 0.551589 | 2_2:+57209421 | Msa0259860:intron |
| TGGAAGCAGGTGAGGGTGTG+CGG | 0.552852 | 2_2:+57209475 | Msa0259860:intron |
| TGGCGAGCACCAAAGTTCAA+AGG | 0.558128 | 2_2:-57209452 | Msa0259850:CDS |
| CTCGCCATGGAAGCAGGTGA+GGG | 0.558194 | 2_2:+57209468 | Msa0259860:intron |
| TATTATATCGGTGTTACAGT+TGG | 0.566830 | 2_2:+57205555 | None:intergenic |
| AAATCGGCCTTCTTGTTGAG+TGG | 0.570384 | 2_2:+57205780 | None:intergenic |
| CATGGTTCCACTCAACAAGA+AGG | 0.587905 | 2_2:-57205787 | Msa0259850:three_prime_UTR |
| AATAACCTTCAGTTATGTAG+AGG | 0.590223 | 2_2:-57205536 | Msa0259850:three_prime_UTR |
| GTGTTTGAAAAGTATTATGT+TGG | 0.590315 | 2_2:-57205705 | Msa0259850:three_prime_UTR |
| AAGAACCTCTACATAACTGA+AGG | 0.607893 | 2_2:+57205531 | None:intergenic |
| TCTTGTCAACATGTTGAACA+TGG | 0.621702 | 2_2:-57205727 | Msa0259850:three_prime_UTR |
| ATGAGGATGAGCACGCCACA+TGG | 0.629028 | 2_2:-57205805 | Msa0259850:exon |
| GATTTCTTCAAAGCAAAGCG+CGG | 0.674013 | 2_2:-57209320 | Msa0259850:CDS |
| TCTTGTTGAGTGGAACCATG+TGG | 0.713214 | 2_2:+57205790 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATCATTGTTTTTTA+TGG | - | chr2_2:57205921-57205940 | Msa0259850:intron | 10.0% |
| !!! | TTTTTAGATTTTTAATGAAT+TGG | - | chr2_2:57206907-57206926 | Msa0259850:intron | 10.0% |
| !!! | TTTTTCTTTTTGTTATAAAT+AGG | - | chr2_2:57209011-57209030 | Msa0259850:intron | 10.0% |
| !!! | TTTTCTTTTTGTTATAAATA+GGG | - | chr2_2:57209012-57209031 | Msa0259850:intron | 10.0% |
| !!! | TTTTATCATCATATTCTTTA+GGG | - | chr2_2:57205486-57205505 | Msa0259850:three_prime_UTR | 15.0% |
| !!! | TCTTGTTATTCATATAAAAA+AGG | - | chr2_2:57206594-57206613 | Msa0259850:intron | 15.0% |
| !!! | CTTGTTATTCATATAAAAAA+GGG | - | chr2_2:57206595-57206614 | Msa0259850:intron | 15.0% |
| !! | AGAATTAAATATTAGAAGTT+GGG | + | chr2_2:57206936-57206955 | None:intergenic | 15.0% |
| !! | AAGAATTAAATATTAGAAGT+TGG | + | chr2_2:57206937-57206956 | None:intergenic | 15.0% |
| !! | CTATATATAAAAAGGATATA+TGG | + | chr2_2:57207396-57207415 | None:intergenic | 15.0% |
| !!! | GTTTTATCATCATATTCTTT+AGG | - | chr2_2:57205485-57205504 | Msa0259850:three_prime_UTR | 20.0% |
| !!! | AAGTTGATATTAATACTTGT+AGG | - | chr2_2:57205509-57205528 | Msa0259850:three_prime_UTR | 20.0% |
| !! | TTGTTAAAGAGAAATTGAAA+GGG | + | chr2_2:57205754-57205773 | None:intergenic | 20.0% |
| !!! | AAGTTCTGAGAAAAAAAAAA+CGG | + | chr2_2:57205790-57205809 | None:intergenic | 20.0% |
| !!! | TATAAAAAAGGGTATATTGA+TGG | - | chr2_2:57206606-57206625 | Msa0259850:intron | 20.0% |
| !!! | ATAAAAAAGGGTATATTGAT+GGG | - | chr2_2:57206607-57206626 | Msa0259850:intron | 20.0% |
| !!! | CCTAAAAAAATTTGTTTCTT+GGG | + | chr2_2:57206809-57206828 | None:intergenic | 20.0% |
| !! | GAATTAAATATTAGAAGTTG+GGG | + | chr2_2:57206935-57206954 | None:intergenic | 20.0% |
| !!! | GCTAGTTTCTAATAAAAAAA+GGG | + | chr2_2:57206982-57207001 | None:intergenic | 20.0% |
| !!! | TGCTAGTTTCTAATAAAAAA+AGG | + | chr2_2:57206983-57207002 | None:intergenic | 20.0% |
| !!! | TTAGATCTTATTTTCAGTTA+AGG | + | chr2_2:57207474-57207493 | None:intergenic | 20.0% |
| !!! | TGAATCTAGCTAATTTTATA+GGG | + | chr2_2:57207814-57207833 | None:intergenic | 20.0% |
| !! | ATTTGTAAATTAGTTATGCT+GGG | + | chr2_2:57208097-57208116 | None:intergenic | 20.0% |
| !! | AATTTGTAAATTAGTTATGC+TGG | + | chr2_2:57208098-57208117 | None:intergenic | 20.0% |
| !! | AAATTAATAAACCAAAAGAC+AGG | + | chr2_2:57208328-57208347 | None:intergenic | 20.0% |
| !!! | TTCAAGTTAGTATTAAAGTT+AGG | + | chr2_2:57208645-57208664 | Msa0259860:CDS | 20.0% |
| !! | AACTTTAATACTAACTTGAA+AGG | - | chr2_2:57208645-57208664 | Msa0259850:intron | 20.0% |
| !!! | AAATGTTTGCTTATTGTTTT+TGG | - | chr2_2:57208925-57208944 | Msa0259850:intron | 20.0% |
| !!! | TTTTGATGAATACATGAATT+TGG | - | chr2_2:57209035-57209054 | Msa0259850:intron | 20.0% |
| !!! | ATTTGCTTTTACAAATTTCA+GGG | - | chr2_2:57209306-57209325 | Msa0259850:CDS | 20.0% |
| !!! | AATATGAAATTTTTATGCAC+CGG | - | chr2_2:57209457-57209476 | Msa0259850:exon | 20.0% |
| !! | ATAACTGAAGGTTATTATAT+CGG | + | chr2_2:57209598-57209617 | Msa0259860:intron | 20.0% |
| !! | GTAGGAATTTTTGTAAAGTT+AGG | - | chr2_2:57205527-57205546 | Msa0259850:three_prime_UTR | 25.0% |
| !! | AACAACTGACTTAGTATTAT+TGG | + | chr2_2:57205555-57205574 | None:intergenic | 25.0% |
| ! | GTTGTTAAAGAGAAATTGAA+AGG | + | chr2_2:57205755-57205774 | None:intergenic | 25.0% |
| ! | AGAAAAAAAAAACGGAGATT+AGG | + | chr2_2:57205782-57205801 | None:intergenic | 25.0% |
| !!! | TTTATGGCATGTTTTAGAAT+AGG | - | chr2_2:57205937-57205956 | Msa0259850:CDS | 25.0% |
| !! | TGAATCTAGCTAATTTTACA+TGG | + | chr2_2:57206074-57206093 | None:intergenic | 25.0% |
| !!! | TCGCAACATTTTGAAATTTA+GGG | + | chr2_2:57206166-57206185 | None:intergenic | 25.0% |
| !!! | ATCGCAACATTTTGAAATTT+AGG | + | chr2_2:57206167-57206186 | None:intergenic | 25.0% |
| !! | ATTTCAAAATGTTGCGATTT+TGG | - | chr2_2:57206169-57206188 | Msa0259850:intron | 25.0% |
| ! | AGACAATCATATATCATTTC+AGG | + | chr2_2:57206226-57206245 | None:intergenic | 25.0% |
| ! | AATGATATATGATTGTCTTG+AGG | - | chr2_2:57206228-57206247 | Msa0259850:intron | 25.0% |
| ! | TGGTTGTTTAATTATGGATT+TGG | + | chr2_2:57206321-57206340 | None:intergenic | 25.0% |
| ! | AATGAAAAGGAAAGAGATAA+AGG | + | chr2_2:57206492-57206511 | None:intergenic | 25.0% |
| ! | AAAAGAGGAGAAAAATGAAA+AGG | + | chr2_2:57206505-57206524 | None:intergenic | 25.0% |
| !! | TAAAAAAGGGTATATTGATG+GGG | - | chr2_2:57206608-57206627 | Msa0259850:intron | 25.0% |
| !!! | CCCAAGAAACAAATTTTTTT+AGG | - | chr2_2:57206806-57206825 | Msa0259850:intron | 25.0% |
| !! | GCCTAAAAAAATTTGTTTCT+TGG | + | chr2_2:57206810-57206829 | None:intergenic | 25.0% |
| !!! | TGTTGTATTTGCTATATTGT+TGG | + | chr2_2:57207141-57207160 | None:intergenic | 25.0% |
| !!! | TTGTCTGTTTTTCTTTTTTG+TGG | - | chr2_2:57207237-57207256 | Msa0259850:intron | 25.0% |
| !!! | ATCGGTTTGTCATTTTAATT+TGG | + | chr2_2:57207436-57207455 | None:intergenic | 25.0% |
| !! | AGGTTTTCAGTTATTTAGAT+CGG | + | chr2_2:57207454-57207473 | None:intergenic | 25.0% |
| ! | TGATGTTCTTGTATGAAAAA+TGG | - | chr2_2:57207665-57207684 | Msa0259850:intron | 25.0% |
| ! | GATGTTCTTGTATGAAAAAT+GGG | - | chr2_2:57207666-57207685 | Msa0259850:intron | 25.0% |
| !!! | TCGCAACATTTTGAAATTTA+GGG | + | chr2_2:57206166-57206185 | None:intergenic | 25.0% |
| !!! | ATCGCAACATTTTGAAATTT+AGG | + | chr2_2:57206167-57206186 | None:intergenic | 25.0% |
| !! | ATTTCAAAATGTTGCGATTT+TGG | - | chr2_2:57206169-57206188 | Msa0259850:intron | 25.0% |
| !! | AATCTAGCTAATTTTATAGG+GGG | + | chr2_2:57207812-57207831 | None:intergenic | 25.0% |
| !! | GAATCTAGCTAATTTTATAG+GGG | + | chr2_2:57207813-57207832 | None:intergenic | 25.0% |
| !! | GTGAATCTAGCTAATTTTAT+AGG | + | chr2_2:57207815-57207834 | None:intergenic | 25.0% |
| ! | AGTTACTAGAAAATGAATGA+TGG | + | chr2_2:57208242-57208261 | None:intergenic | 25.0% |
| !!! | ATTCAAAGTTTTGGATAACA+TGG | + | chr2_2:57208830-57208849 | Msa0259860:intron | 25.0% |
| !! | GAGATTCAAATTCAAAGTTT+TGG | + | chr2_2:57208839-57208858 | Msa0259860:intron | 25.0% |
| ! | TTTCAAATTGGATATTTGAG+TGG | - | chr2_2:57208970-57208989 | Msa0259850:intron | 25.0% |
| !!! | TGAATACATGAATTTGGTTT+TGG | - | chr2_2:57209041-57209060 | Msa0259850:intron | 25.0% |
| !!! | ATGATGTTATTGTTTTGATC+AGG | - | chr2_2:57209170-57209189 | Msa0259850:intron | 25.0% |
| !!! | TGATGTTATTGTTTTGATCA+GGG | - | chr2_2:57209171-57209190 | Msa0259850:intron | 25.0% |
| !!! | TGCATTTTCATCTATTTCTA+TGG | - | chr2_2:57209255-57209274 | Msa0259850:intron | 25.0% |
| !!! | GCATTTTCATCTATTTCTAT+GGG | - | chr2_2:57209256-57209275 | Msa0259850:intron | 25.0% |
| !!! | GATTTGCTTTTACAAATTTC+AGG | - | chr2_2:57209305-57209324 | Msa0259850:CDS | 25.0% |
| !!! | TTTGCTTTTACAAATTTCAG+GGG | - | chr2_2:57209307-57209326 | Msa0259850:CDS | 25.0% |
| ! | GAAATAGTAACAAACTGAAA+AGG | + | chr2_2:57209391-57209410 | Msa0259860:intron | 25.0% |
| !!! | GTGTTTGAAAAGTATTATGT+TGG | - | chr2_2:57209433-57209452 | Msa0259850:intron | 25.0% |
| AATTCTTTCGCTCAATTTCT+AGG | - | chr2_2:57205606-57205625 | Msa0259850:three_prime_UTR | 30.0% | |
| ATTCTTTCGCTCAATTTCTA+GGG | - | chr2_2:57205607-57205626 | Msa0259850:three_prime_UTR | 30.0% | |
| !! | TTTTTGAGCAAAAGGATTTG+AGG | - | chr2_2:57205854-57205873 | Msa0259850:intron | 30.0% |
| TTTGATACCTAGAGTTATTG+AGG | + | chr2_2:57206022-57206041 | None:intergenic | 30.0% | |
| GGAGCATAATGGTTATTTAT+TGG | - | chr2_2:57206121-57206140 | Msa0259850:intron | 30.0% | |
| !!! | GCAACATTTTGAAATTTAGG+GGG | + | chr2_2:57206164-57206183 | None:intergenic | 30.0% |
| !!! | CGCAACATTTTGAAATTTAG+GGG | + | chr2_2:57206165-57206184 | None:intergenic | 30.0% |
| !! | TGTGTGAAAGTTTTAATAGG+GGG | + | chr2_2:57206195-57206214 | None:intergenic | 30.0% |
| !! | GTGTGTGAAAGTTTTAATAG+GGG | + | chr2_2:57206196-57206215 | None:intergenic | 30.0% |
| !! | CGTGTGTGAAAGTTTTAATA+GGG | + | chr2_2:57206197-57206216 | None:intergenic | 30.0% |
| !! | ACGTGTGTGAAAGTTTTAAT+AGG | + | chr2_2:57206198-57206217 | None:intergenic | 30.0% |
| ! | TTATGGATTTGGTATTCACT+TGG | + | chr2_2:57206310-57206329 | None:intergenic | 30.0% |
| ! | ATATGGTTTAGTGCCATTAA+TGG | - | chr2_2:57206444-57206463 | Msa0259850:intron | 30.0% |
| GAATAACCAAACACCATTAA+TGG | + | chr2_2:57206460-57206479 | None:intergenic | 30.0% | |
| AAGAAACAGTGACAAAAAAG+AGG | + | chr2_2:57206520-57206539 | None:intergenic | 30.0% | |
| GAAACAAGAGATTAAAGAAG+AGG | + | chr2_2:57206544-57206563 | None:intergenic | 30.0% | |
| GCAATAAAAATGACGAACAA+GGG | + | chr2_2:57207010-57207029 | None:intergenic | 30.0% | |
| TGCAATAAAAATGACGAACA+AGG | + | chr2_2:57207011-57207030 | None:intergenic | 30.0% | |
| !! | TCTGTTTTTCTTTTTTGTGG+TGG | - | chr2_2:57207240-57207259 | Msa0259850:intron | 30.0% |
| TGCAGTATATATGTAAGATC+CGG | + | chr2_2:57207283-57207302 | None:intergenic | 30.0% | |
| ATACGTAGGTATATGATGTT+TGG | + | chr2_2:57207604-57207623 | None:intergenic | 30.0% | |
| CATACTAGTACAAAATACGT+AGG | + | chr2_2:57207618-57207637 | None:intergenic | 30.0% | |
| GGAGCATAATGGTTATTTAT+TGG | - | chr2_2:57206121-57206140 | Msa0259850:intron | 30.0% | |
| !!! | GCAACATTTTGAAATTTAGG+GGG | + | chr2_2:57206164-57206183 | None:intergenic | 30.0% |
| !!! | CGCAACATTTTGAAATTTAG+GGG | + | chr2_2:57206165-57206184 | None:intergenic | 30.0% |
| !!! | CCATTGTTTTAAACATGTCT+CGG | + | chr2_2:57207889-57207908 | None:intergenic | 30.0% |
| ! | ATAGTGTTTTGCACAATACA+AGG | + | chr2_2:57207969-57207988 | None:intergenic | 30.0% |
| !! | GTTTGTTGATGGTTTACATT+GGG | + | chr2_2:57208038-57208057 | None:intergenic | 30.0% |
| ACTAGAAAATGAATGATGGT+TGG | + | chr2_2:57208238-57208257 | None:intergenic | 30.0% | |
| ! | AACCTTGTAGTTTATCGATT+TGG | - | chr2_2:57208265-57208284 | Msa0259850:intron | 30.0% |
| TTCCAAATCGATAAACTACA+AGG | + | chr2_2:57208270-57208289 | None:intergenic | 30.0% | |
| AGTTATTTGGATTCTGATTC+TGG | - | chr2_2:57208396-57208415 | Msa0259850:intron | 30.0% | |
| !!! | ACTTAGGATTGGTTAGTTTT+TGG | - | chr2_2:57208498-57208517 | Msa0259850:intron | 30.0% |
| !!! | CTTAGGATTGGTTAGTTTTT+GGG | - | chr2_2:57208499-57208518 | Msa0259850:intron | 30.0% |
| !!! | TTAGGATTGGTTAGTTTTTG+GGG | - | chr2_2:57208500-57208519 | Msa0259850:intron | 30.0% |
| !! | TGTCTTATTTGTGGATGTTA+GGG | - | chr2_2:57208529-57208548 | Msa0259850:intron | 30.0% |
| AATTTCAGATCATCTCTTCT+AGG | + | chr2_2:57208573-57208592 | None:intergenic | 30.0% | |
| GAATTTCGTATTTCAAACTG+AGG | - | chr2_2:57208667-57208686 | Msa0259850:intron | 30.0% | |
| TTCTTATCTCTTCTTTCAGA+GGG | + | chr2_2:57208715-57208734 | Msa0259860:CDS | 30.0% | |
| TTTCTTATCTCTTCTTTCAG+AGG | + | chr2_2:57208716-57208735 | Msa0259860:CDS | 30.0% | |
| GAGTGTAATATTTCTTAGAG+AGG | + | chr2_2:57208768-57208787 | Msa0259860:CDS | 30.0% | |
| !!! | AGTTTTGGATAACATGGATT+TGG | + | chr2_2:57208824-57208843 | Msa0259860:intron | 30.0% |
| TTTGTCTCTTTCAACAGTTT+AGG | - | chr2_2:57208860-57208879 | Msa0259850:intron | 30.0% | |
| ATTCATGAGCTCATTTCTTA+GGG | - | chr2_2:57208900-57208919 | Msa0259850:intron | 30.0% | |
| !! | TTTTTGGTATAGAGTGTACA+TGG | - | chr2_2:57208941-57208960 | Msa0259850:intron | 30.0% |
| ACATGGTACTCATTTCAAAT+TGG | - | chr2_2:57208958-57208977 | Msa0259850:intron | 30.0% | |
| AAATTGGATATTTGAGTGGT+TGG | - | chr2_2:57208974-57208993 | Msa0259850:intron | 30.0% | |
| ! | TTATGTTGTCTCCTTTAAGA+AGG | + | chr2_2:57209202-57209221 | Msa0259860:intron | 30.0% |
| CTGAAAAGGTAGTGATAAAT+CGG | + | chr2_2:57209377-57209396 | Msa0259860:intron | 30.0% | |
| !! | TATTATATCGGTGTTACAGT+TGG | + | chr2_2:57209586-57209605 | Msa0259860:intron | 30.0% |
| AATAACCTTCAGTTATGTAG+AGG | - | chr2_2:57209602-57209621 | Msa0259850:five_prime_UTR | 30.0% | |
| ! | TTTTCTGTCGTCAATTTTGA+TGG | - | chr2_2:57209647-57209666 | Msa0259850:five_prime_UTR | 30.0% |
| !! | TTTCTGTCGTCAATTTTGAT+GGG | - | chr2_2:57209648-57209667 | Msa0259850:five_prime_UTR | 30.0% |
| ! | GTGATGAGAAAGCATACAAT+GGG | + | chr2_2:57205724-57205743 | None:intergenic | 35.0% |
| ! | AGTGATGAGAAAGCATACAA+TGG | + | chr2_2:57205725-57205744 | None:intergenic | 35.0% |
| !!! | GATTTGGCTTTTTGAGCAAA+AGG | - | chr2_2:57205846-57205865 | Msa0259850:intron | 35.0% |
| CAAAAGGATTTGAGGATTGA+AGG | - | chr2_2:57205862-57205881 | Msa0259850:intron | 35.0% | |
| !!! | ATGGCATGTTTTAGAATAGG+AGG | - | chr2_2:57205940-57205959 | Msa0259850:CDS | 35.0% |
| ! | GTCACTATGCTTTTCAATCT+CGG | - | chr2_2:57205973-57205992 | Msa0259850:intron | 35.0% |
| GGTGCTTGGTTGTTTAATTA+TGG | + | chr2_2:57206327-57206346 | None:intergenic | 35.0% | |
| !!! | TTTTGGATTTTGAAGGTGCT+TGG | + | chr2_2:57206341-57206360 | None:intergenic | 35.0% |
| !!! | CCTCAAGTTTTGGATTTTGA+AGG | + | chr2_2:57206348-57206367 | None:intergenic | 35.0% |
| CCTTCAAAATCCAAAACTTG+AGG | - | chr2_2:57206345-57206364 | Msa0259850:intron | 35.0% | |
| !!! | ACTTTTACACAAAGGTGTTG+GGG | + | chr2_2:57206389-57206408 | None:intergenic | 35.0% |
| !!! | GACTTTTACACAAAGGTGTT+GGG | + | chr2_2:57206390-57206409 | None:intergenic | 35.0% |
| !! | AGACTTTTACACAAAGGTGT+TGG | + | chr2_2:57206391-57206410 | None:intergenic | 35.0% |
| CACCTTTGTGTAAAAGTCTA+TGG | - | chr2_2:57206392-57206411 | Msa0259850:intron | 35.0% | |
| ! | GTCCATAGACTTTTACACAA+AGG | + | chr2_2:57206397-57206416 | None:intergenic | 35.0% |
| TGGCACTAAACCATATTTCA+AGG | + | chr2_2:57206440-57206459 | None:intergenic | 35.0% | |
| ! | TTAGTGCCATTAATGGTGTT+TGG | - | chr2_2:57206451-57206470 | Msa0259850:intron | 35.0% |
| TGGTGTTTGGTTATTCTCTT+CGG | - | chr2_2:57206464-57206483 | Msa0259850:intron | 35.0% | |
| TCTGCATTGTCATTCTATTG+CGG | - | chr2_2:57206562-57206581 | Msa0259850:intron | 35.0% | |
| TAAAGACGCAATATTCGATC+TGG | - | chr2_2:57206722-57206741 | Msa0259850:intron | 35.0% | |
| !!! | CAATAAGCTGTTTTTGCATG+CGG | - | chr2_2:57206772-57206791 | Msa0259850:intron | 35.0% |
| ACCGATTAAGCAAGCTAAAA+AGG | - | chr2_2:57206861-57206880 | Msa0259850:intron | 35.0% | |
| !!! | CCCTTTTTAGCTTGCTTAAT+CGG | + | chr2_2:57206865-57206884 | None:intergenic | 35.0% |
| CCGATTAAGCAAGCTAAAAA+GGG | - | chr2_2:57206862-57206881 | Msa0259850:intron | 35.0% | |
| !! | GTTTTTCTTTTTTGTGGTGG+TGG | - | chr2_2:57207243-57207262 | Msa0259850:intron | 35.0% |
| CAGTATATATGTAAGATCCG+GGG | + | chr2_2:57207281-57207300 | None:intergenic | 35.0% | |
| GCAGTATATATGTAAGATCC+GGG | + | chr2_2:57207282-57207301 | None:intergenic | 35.0% | |
| ! | CCGAGACATGTTTAAAACAA+TGG | - | chr2_2:57207886-57207905 | Msa0259850:intron | 35.0% |
| ! | GTTTGTTAAGAAACCCCAAA+TGG | - | chr2_2:57207918-57207937 | Msa0259850:intron | 35.0% |
| !! | CGTTTGTTGATGGTTTACAT+TGG | + | chr2_2:57208039-57208058 | None:intergenic | 35.0% |
| ATGTAAACCATCAACAAACG+AGG | - | chr2_2:57208039-57208058 | Msa0259850:intron | 35.0% | |
| ! | ATTCACCAAGTTAGTCTGTT+AGG | + | chr2_2:57208157-57208176 | None:intergenic | 35.0% |
| ATAAACTACAAGGCTGAGTT+GGG | + | chr2_2:57208183-57208202 | None:intergenic | 35.0% | |
| AATAAACTACAAGGCTGAGT+TGG | + | chr2_2:57208184-57208203 | None:intergenic | 35.0% | |
| GAATTCTGATGCTATGATTG+TGG | - | chr2_2:57208361-57208380 | Msa0259850:intron | 35.0% | |
| GATTCGTTGCTCTAGTTATT+TGG | - | chr2_2:57208383-57208402 | Msa0259850:intron | 35.0% | |
| AATCCTAAGTTTATGAGCTG+GGG | + | chr2_2:57208488-57208507 | None:intergenic | 35.0% | |
| CAATCCTAAGTTTATGAGCT+GGG | + | chr2_2:57208489-57208508 | None:intergenic | 35.0% | |
| !! | CTGTCTTATTTGTGGATGTT+AGG | - | chr2_2:57208528-57208547 | Msa0259850:intron | 35.0% |
| ATCAACCACTGTATAGACTA+TGG | - | chr2_2:57208596-57208615 | Msa0259850:intron | 35.0% | |
| TCTTATCTCTTCTTTCAGAG+GGG | + | chr2_2:57208714-57208733 | Msa0259860:CDS | 35.0% | |
| TGCACTGTCTACATTTATCT+TGG | - | chr2_2:57208798-57208817 | Msa0259850:intron | 35.0% | |
| GATTCATGAGCTCATTTCTT+AGG | - | chr2_2:57208899-57208918 | Msa0259850:intron | 35.0% | |
| TTCATGAGCTCATTTCTTAG+GGG | - | chr2_2:57208901-57208920 | Msa0259850:intron | 35.0% | |
| ! | GATATTTGAGTGGTTGGTTA+AGG | - | chr2_2:57208980-57208999 | Msa0259850:intron | 35.0% |
| AAGAAGAGCAAAAAGACACT+AGG | - | chr2_2:57209090-57209109 | Msa0259850:intron | 35.0% | |
| CAGAAAATGCATATGTTGCA+AGG | + | chr2_2:57209149-57209168 | Msa0259860:intron | 35.0% | |
| !!! | TGTTATTGTTTTGATCAGGG+AGG | - | chr2_2:57209174-57209193 | Msa0259850:intron | 35.0% |
| ACAAATTTCAGGGGTAAATG+AGG | - | chr2_2:57209316-57209335 | Msa0259850:CDS | 35.0% | |
| TCTTGTCAACATGTTGAACA+TGG | - | chr2_2:57209411-57209430 | Msa0259850:intron | 35.0% | |
| ! | AACAAACCAAAGCATTTGTC+CGG | + | chr2_2:57209479-57209498 | Msa0259860:intron | 35.0% |
| AAGAACCTCTACATAACTGA+AGG | + | chr2_2:57209610-57209629 | Msa0259860:intron | 35.0% | |
| ! | GAGAAAGCATACAATGGGTT+GGG | + | chr2_2:57205719-57205738 | None:intergenic | 40.0% |
| ! | TGAGAAAGCATACAATGGGT+TGG | + | chr2_2:57205720-57205739 | None:intergenic | 40.0% |
| GATTTCTTCAAAGCAAAGCG+CGG | - | chr2_2:57205818-57205837 | Msa0259850:intron | 40.0% | |
| TCATGTGCCTCAATAACTCT+AGG | - | chr2_2:57206012-57206031 | Msa0259850:intron | 40.0% | |
| ! | TGAACATGTCTGGAGCATAA+TGG | - | chr2_2:57206110-57206129 | Msa0259850:intron | 40.0% |
| AGGCAATTTGTGTTCCTCTT+TGG | - | chr2_2:57206278-57206297 | Msa0259850:intron | 40.0% | |
| !!! | TGGGGTTTGTTTTGATTGAG+AGG | + | chr2_2:57206371-57206390 | None:intergenic | 40.0% |
| ! | CTCTGCATAGCCTTGAAATA+TGG | - | chr2_2:57206427-57206446 | Msa0259850:intron | 40.0% |
| ! | AAAAGGGTATATTGATGGGG+TGG | - | chr2_2:57206611-57206630 | Msa0259850:intron | 40.0% |
| TATTGATGGGGTGGTGAAAA+TGG | - | chr2_2:57206620-57206639 | Msa0259850:intron | 40.0% | |
| ATTGATGGGGTGGTGAAAAT+GGG | - | chr2_2:57206621-57206640 | Msa0259850:intron | 40.0% | |
| TGGGAAAGAGGAAAAATGCA+TGG | - | chr2_2:57206640-57206659 | Msa0259850:intron | 40.0% | |
| AAATGCATGGATTTGACACG+TGG | - | chr2_2:57206653-57206672 | Msa0259850:intron | 40.0% | |
| ! | TGAACATGTCTGGAGCATAA+TGG | - | chr2_2:57206110-57206129 | Msa0259850:intron | 40.0% |
| ! | TGAACATGTCTGGAGCATAA+TGG | - | chr2_2:57206110-57206129 | Msa0259850:intron | 40.0% |
| ! | CAATACAAGGCATTACCCTT+CGG | + | chr2_2:57207956-57207975 | None:intergenic | 40.0% |
| GAGTGCTACAACTGTAAGAT+AGG | + | chr2_2:57207992-57208011 | None:intergenic | 40.0% | |
| TAAACCATCAACAAACGAGG+TGG | - | chr2_2:57208042-57208061 | Msa0259850:intron | 40.0% | |
| TTAGTTATGCTGGGAGCTAT+GGG | + | chr2_2:57208088-57208107 | None:intergenic | 40.0% | |
| ATTAGTTATGCTGGGAGCTA+TGG | + | chr2_2:57208089-57208108 | None:intergenic | 40.0% | |
| TGAATAAGCCCATTATTGCG+AGG | - | chr2_2:57208126-57208145 | Msa0259850:intron | 40.0% | |
| TTGCACCTAACAGACTAACT+TGG | - | chr2_2:57208149-57208168 | Msa0259850:intron | 40.0% | |
| GACTTGGCGAATAAACTACA+AGG | + | chr2_2:57208193-57208212 | None:intergenic | 40.0% | |
| AAATGAATGATGGTTGGACG+AGG | + | chr2_2:57208232-57208251 | None:intergenic | 40.0% | |
| ! | ATTCTGATTCTGGTTAGACC+AGG | - | chr2_2:57208406-57208425 | Msa0259850:intron | 40.0% |
| CCAATCCTAAGTTTATGAGC+TGG | + | chr2_2:57208490-57208509 | None:intergenic | 40.0% | |
| CCAGCTCATAAACTTAGGAT+TGG | - | chr2_2:57208487-57208506 | Msa0259850:intron | 40.0% | |
| AACCACTGTATAGACTATGG+AGG | - | chr2_2:57208599-57208618 | Msa0259850:intron | 40.0% | |
| !! | GGACAAATGCTTTGGTTTGT+TGG | - | chr2_2:57209478-57209497 | Msa0259850:five_prime_UTR | 40.0% |
| TGGAGTCTAGGCATTAATAC+AGG | + | chr2_2:57209560-57209579 | Msa0259860:intron | 40.0% | |
| !!! | TACAGTTGGTTTTGGAGTCT+AGG | + | chr2_2:57209572-57209591 | Msa0259860:intron | 40.0% |
| !!! | ATCGGTGTTACAGTTGGTTT+TGG | + | chr2_2:57209580-57209599 | Msa0259860:intron | 40.0% |
| GGTCATGACCCTTTGAACTT+TGG | + | chr2_2:57205698-57205717 | None:intergenic | 45.0% | |
| TAGCTAGATTCACGAGCTTG+AGG | - | chr2_2:57206082-57206101 | Msa0259850:CDS | 45.0% | |
| TGAGGACGATTGAACATGTC+TGG | - | chr2_2:57206100-57206119 | Msa0259850:CDS | 45.0% | |
| ACCTGATGCTCAACATGACT+GGG | + | chr2_2:57206256-57206275 | None:intergenic | 45.0% | |
| TCATGTTGAGCATCAGGTGA+AGG | - | chr2_2:57206258-57206277 | Msa0259850:intron | 45.0% | |
| ! | GATTGAGAGGCCTCAAGTTT+TGG | + | chr2_2:57206358-57206377 | None:intergenic | 45.0% |
| AAGGCTATGCAGAGATGTGA+AGG | + | chr2_2:57206421-57206440 | None:intergenic | 45.0% | |
| GTATACGTGTGCGAATGTGT+TGG | - | chr2_2:57206698-57206717 | Msa0259850:intron | 45.0% | |
| GCTCATATTAACCGCATCTG+TGG | - | chr2_2:57206828-57206847 | Msa0259850:intron | 45.0% | |
| !!! | TTCTTTTTTGTGGTGGTGGC+CGG | - | chr2_2:57207247-57207266 | Msa0259850:intron | 45.0% |
| TGAGCTTAGCTCAGCTGATA+TGG | + | chr2_2:57207310-57207329 | None:intergenic | 45.0% | |
| TGAGGACGATTGAACATGTC+TGG | - | chr2_2:57206100-57206119 | Msa0259850:CDS | 45.0% | |
| TAGCTAGATTCACGAGCTTG+AGG | - | chr2_2:57206082-57206101 | Msa0259850:CDS | 45.0% | |
| TGAGGACGATTGAACATGTC+TGG | - | chr2_2:57206100-57206119 | Msa0259850:CDS | 45.0% | |
| GATGGTTTACATTGGGCTGT+TGG | + | chr2_2:57208031-57208050 | None:intergenic | 45.0% | |
| ! | ACATCCACCTCGTTTGTTGA+TGG | + | chr2_2:57208049-57208068 | None:intergenic | 45.0% |
| TAGTTATGCTGGGAGCTATG+GGG | + | chr2_2:57208087-57208106 | None:intergenic | 45.0% | |
| AGGTGCAACCTCGCAATAAT+GGG | + | chr2_2:57208137-57208156 | None:intergenic | 45.0% | |
| TAGGTGCAACCTCGCAATAA+TGG | + | chr2_2:57208138-57208157 | None:intergenic | 45.0% | |
| TTATGCTGTTGTTGTGTGCC+AGG | - | chr2_2:57208295-57208314 | Msa0259850:intron | 45.0% | |
| CAAAAGACAGGTTCACAACC+TGG | + | chr2_2:57208316-57208335 | None:intergenic | 45.0% | |
| ! | CAGGTTGTGAACCTGTCTTT+TGG | - | chr2_2:57208314-57208333 | Msa0259850:intron | 45.0% |
| CTAAGTTTATGAGCTGGGGT+GGG | + | chr2_2:57208484-57208503 | None:intergenic | 45.0% | |
| !! | GGGTTCAGCTGTCTTATTTG+TGG | - | chr2_2:57208520-57208539 | Msa0259850:intron | 45.0% |
| TGCCTCCATAGTCTATACAG+TGG | + | chr2_2:57208604-57208623 | Msa0259860:CDS | 45.0% | |
| TCAGGGAGGATCCTTCTTAA+AGG | - | chr2_2:57209188-57209207 | Msa0259850:intron | 45.0% | |
| TCTTGTTGAGTGGAACCATG+TGG | + | chr2_2:57209351-57209370 | Msa0259860:intron | 45.0% | |
| CATGGTTCCACTCAACAAGA+AGG | - | chr2_2:57209351-57209370 | Msa0259850:intron | 45.0% | |
| AAATCGGCCTTCTTGTTGAG+TGG | + | chr2_2:57209361-57209380 | Msa0259860:intron | 45.0% | |
| TATGCACCGGACAAATGCTT+TGG | - | chr2_2:57209470-57209489 | Msa0259850:exon | 45.0% | |
| !!! | AAAATTTTGATTAAAATTAT+AGG | - | chr2_2:57207057-57207076 | Msa0259850:intron | 5.0% |
| !! | AATATATACTATATATAAAA+AGG | + | chr2_2:57207404-57207423 | None:intergenic | 5.0% |
| !! | TTGAACTTTGGTGCTCGCCA+TGG | + | chr2_2:57205686-57205705 | None:intergenic | 50.0% |
| TGGCGAGCACCAAAGTTCAA+AGG | - | chr2_2:57205686-57205705 | Msa0259850:three_prime_UTR | 50.0% | |
| GGCGAGCACCAAAGTTCAAA+GGG | - | chr2_2:57205687-57205706 | Msa0259850:three_prime_UTR | 50.0% | |
| GCAAAGCGCGGATTCAGATT+TGG | - | chr2_2:57205830-57205849 | Msa0259850:intron | 50.0% | |
| TCCCAGTCATGTTGAGCATC+AGG | - | chr2_2:57206252-57206271 | Msa0259850:intron | 50.0% | |
| CACCTGATGCTCAACATGAC+TGG | + | chr2_2:57206257-57206276 | None:intergenic | 50.0% | |
| !! | TCACTTGGTGCAGTCCAAAG+AGG | + | chr2_2:57206295-57206314 | None:intergenic | 50.0% |
| GGGTGGTGAAAATGGGAAAG+AGG | - | chr2_2:57206628-57206647 | Msa0259850:intron | 50.0% | |
| CGCAATATTCGATCTGGACG+AGG | - | chr2_2:57206728-57206747 | Msa0259850:intron | 50.0% | |
| !!! | TCTTTTTTGTGGTGGTGGCC+GGG | - | chr2_2:57207248-57207267 | Msa0259850:intron | 50.0% |
| TCAGCTGAGCTAAGCTCACA+AGG | - | chr2_2:57207312-57207331 | Msa0259850:intron | 50.0% | |
| ! | GCTCGTGAATCTAGCTCAAG+AGG | + | chr2_2:57207696-57207715 | None:intergenic | 50.0% |
| GAGCTAGATTCACGAGCTTG+AGG | - | chr2_2:57207699-57207718 | Msa0259850:intron | 50.0% | |
| ! | GCTGTTGCATCTGCCATTTG+GGG | + | chr2_2:57207934-57207953 | None:intergenic | 50.0% |
| ! | GGCTGTTGCATCTGCCATTT+GGG | + | chr2_2:57207935-57207954 | None:intergenic | 50.0% |
| TGGGCTGTTGGATGCATACA+TGG | + | chr2_2:57208019-57208038 | None:intergenic | 50.0% | |
| AACGAGGTGGATGTGTTGTC+TGG | - | chr2_2:57208055-57208074 | Msa0259850:intron | 50.0% | |
| ATTCGCCAAGTCAGCCTGTT+AGG | - | chr2_2:57208201-57208220 | Msa0259850:intron | 50.0% | |
| TTGCACCTAACAGGCTGACT+TGG | + | chr2_2:57208209-57208228 | None:intergenic | 50.0% | |
| TAGTCTGGTCTGGTTAGACC+AGG | - | chr2_2:57208445-57208464 | Msa0259850:intron | 50.0% | |
| CCTAAGTTTATGAGCTGGGG+TGG | + | chr2_2:57208485-57208504 | None:intergenic | 50.0% | |
| CCACCCCAGCTCATAAACTT+AGG | - | chr2_2:57208482-57208501 | Msa0259850:intron | 50.0% | |
| GTGTGCGGACGATGAAGGTT+TGG | + | chr2_2:57205651-57205670 | None:intergenic | 55.0% | |
| TCGATCTGGACGAGGTTGCT+TGG | - | chr2_2:57206736-57206755 | Msa0259850:intron | 55.0% | |
| AACCGCATCTGTGGCAGTGA+TGG | - | chr2_2:57206837-57206856 | Msa0259850:intron | 55.0% | |
| TGCCATCACTGCCACAGATG+CGG | + | chr2_2:57206842-57206861 | None:intergenic | 55.0% | |
| !!! | CTTTTTTGTGGTGGTGGCCG+GGG | - | chr2_2:57207249-57207268 | Msa0259850:intron | 55.0% |
| CGGCTGTTGCATCTGCCATT+TGG | + | chr2_2:57207936-57207955 | None:intergenic | 55.0% | |
| ATGGCAGATGCAACAGCCGA+AGG | - | chr2_2:57207937-57207956 | Msa0259850:intron | 55.0% | |
| TGGCAGATGCAACAGCCGAA+GGG | - | chr2_2:57207938-57207957 | Msa0259850:intron | 55.0% | |
| TGGACGAGGTTGCACCTAAC+AGG | + | chr2_2:57208218-57208237 | None:intergenic | 55.0% | |
| AGACCAGACTAGAGCAGACC+TGG | + | chr2_2:57208436-57208455 | None:intergenic | 55.0% | |
| AGGTCTGCTCTAGTCTGGTC+TGG | - | chr2_2:57208435-57208454 | Msa0259850:intron | 55.0% | |
| ATGAGGATGAGCACGCCACA+TGG | - | chr2_2:57209333-57209352 | Msa0259850:CDS | 55.0% | |
| ! | TGAGGGTGTGCGGACGATGA+AGG | + | chr2_2:57205656-57205675 | None:intergenic | 60.0% |
| ! | TGGAAGCAGGTGAGGGTGTG+CGG | + | chr2_2:57205666-57205685 | None:intergenic | 60.0% |
| CACACCCTCACCTGCTTCCA+TGG | - | chr2_2:57205666-57205685 | Msa0259850:three_prime_UTR | 60.0% | |
| CTCGCCATGGAAGCAGGTGA+GGG | + | chr2_2:57205673-57205692 | None:intergenic | 60.0% | |
| ! | TTGGTGCTCGCCATGGAAGC+AGG | + | chr2_2:57205679-57205698 | None:intergenic | 60.0% |
| AAGATCCGGGGTTCGAACCC+CGG | + | chr2_2:57207269-57207288 | None:intergenic | 60.0% | |
| CAGACTAGAGCAGACCTGGC+TGG | + | chr2_2:57208432-57208451 | None:intergenic | 60.0% | |
| CAGCCAGGTCTGCTCTAGTC+TGG | - | chr2_2:57208430-57208449 | Msa0259850:intron | 60.0% | |
| GCTCGCCATGGAAGCAGGTG+AGG | + | chr2_2:57205674-57205693 | None:intergenic | 65.0% | |
| CTGGTTAGACCAGGCCAGCC+AGG | - | chr2_2:57208415-57208434 | Msa0259850:intron | 65.0% | |
| ! | TAGAGCAGACCTGGCTGGCC+TGG | + | chr2_2:57208427-57208446 | None:intergenic | 65.0% |
| TGAGCTGGGGTGGGCAGACG+TGG | + | chr2_2:57208475-57208494 | None:intergenic | 70.0% | |
| GGTGGCCGGGGTTCGAACCC+CGG | - | chr2_2:57207261-57207280 | Msa0259850:intron | 75.0% | |
| ! | GTGGGCAGACGTGGCTGGCC+TGG | + | chr2_2:57208466-57208485 | None:intergenic | 75.0% |
| CTGGGGTGGGCAGACGTGGC+TGG | + | chr2_2:57208471-57208490 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 57205481 | 57209679 | 57205481 | ID=Msa0259850;Name=Msa0259850 |
| chr2_2 | mRNA | 57205481 | 57209679 | 57205481 | ID=Msa0259850-mRNA-1;Parent=Msa0259850;Name=Msa0259850-mRNA-1;_AED=0.09;_eAED=0.09;_QI=204|1|1|1|0.75|0.6|5|343|88 |
| chr2_2 | exon | 57205481 | 57205833 | 57205481 | ID=Msa0259850-mRNA-1:exon:17405;Parent=Msa0259850-mRNA-1 |
| chr2_2 | exon | 57205923 | 57205968 | 57205923 | ID=Msa0259850-mRNA-1:exon:17404;Parent=Msa0259850-mRNA-1 |
| chr2_2 | exon | 57206049 | 57206127 | 57206049 | ID=Msa0259850-mRNA-1:exon:17403;Parent=Msa0259850-mRNA-1 |
| chr2_2 | exon | 57209266 | 57209355 | 57209266 | ID=Msa0259850-mRNA-1:exon:17402;Parent=Msa0259850-mRNA-1 |
| chr2_2 | exon | 57209434 | 57209679 | 57209434 | ID=Msa0259850-mRNA-1:exon:17401;Parent=Msa0259850-mRNA-1 |
| chr2_2 | five_prime_UTR | 57209476 | 57209679 | 57209476 | ID=Msa0259850-mRNA-1:five_prime_utr;Parent=Msa0259850-mRNA-1 |
| chr2_2 | CDS | 57209434 | 57209475 | 57209434 | ID=Msa0259850-mRNA-1:cds;Parent=Msa0259850-mRNA-1 |
| chr2_2 | CDS | 57209266 | 57209355 | 57209266 | ID=Msa0259850-mRNA-1:cds;Parent=Msa0259850-mRNA-1 |
| chr2_2 | CDS | 57206049 | 57206127 | 57206049 | ID=Msa0259850-mRNA-1:cds;Parent=Msa0259850-mRNA-1 |
| chr2_2 | CDS | 57205923 | 57205968 | 57205923 | ID=Msa0259850-mRNA-1:cds;Parent=Msa0259850-mRNA-1 |
| chr2_2 | CDS | 57205824 | 57205833 | 57205824 | ID=Msa0259850-mRNA-1:cds;Parent=Msa0259850-mRNA-1 |
| chr2_2 | three_prime_UTR | 57205481 | 57205823 | 57205481 | ID=Msa0259850-mRNA-1:three_prime_utr;Parent=Msa0259850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
