AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0232730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0232730 MtrunA17_Chr2g0280181 97.831 415 9 0 1 415 1 415 0.0 816
Msa0232730 MtrunA17_Chr4g0076531 86.831 243 27 3 175 412 5 247 1.11e-140 401
Msa0232730 MtrunA17_Chr1g0154021 24.742 388 245 9 29 409 44 391 1.18e-25 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0232730 AT5G64510.1 66.194 423 121 8 5 415 12 424 0.0 541

Find 145 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTGGAGTGGAAGGTTC+TGG 0.145785 2_2:-4981814 None:intergenic
TGGCCTCTTGCCTCTCTTAA+TGG 0.159460 2_2:+4983500 Msa0232730:CDS
GCCCGGCAGCAAAGCCATTT+TGG 0.159921 2_2:-4983208 None:intergenic
CTTAAGCTTCAACCTGTTAT+TGG 0.177318 2_2:-4983348 None:intergenic
CAGGGAAGTGTCAACTAATT+TGG 0.230917 2_2:-4983414 None:intergenic
GTATCTTCAAGAAGCTTAAA+TGG 0.237264 2_2:-4982167 None:intergenic
TTTAGGGTTGAGGAGGAAAA+TGG 0.237498 2_2:+4982221 Msa0232730:CDS
CGGAAATGGGTTACCCGTTT+TGG 0.239349 2_2:+4982265 Msa0232730:CDS
TGCTGGACCCATGGAGATTT+GGG 0.243690 2_2:+4982301 Msa0232730:CDS
ATCCCCTCTACAATTCCTTT+TGG 0.251738 2_2:-4983946 None:intergenic
GAATCAATTGTGAAAGGATT+AGG 0.252586 2_2:+4982038 Msa0232730:CDS
TTGGCTCCGTTTCAGCTTGC+TGG 0.255772 2_2:+4982284 Msa0232730:CDS
TTGCTGGACCCATGGAGATT+TGG 0.273944 2_2:+4982300 Msa0232730:CDS
CCCTTTGCCTTGTAAATTAG+TGG 0.279939 2_2:+4983896 Msa0232730:exon
TCAGGCTTAGTCCTCCATTC+AGG 0.281632 2_2:-4983704 None:intergenic
TTAAAATCGGAAAATGCTTT+GGG 0.283004 2_2:-4982014 None:intergenic
CGGAAGCGAGGGAGGAATTA+AGG 0.287457 2_2:-4981974 None:intergenic
CTTAAAATCGGAAAATGCTT+TGG 0.290406 2_2:-4982015 None:intergenic
CCGTTAAACCGAACCCAAAA+TGG 0.291806 2_2:+4983194 Msa0232730:CDS
GAGGCCACAATGCGGTAAAC+TGG 0.300211 2_2:-4983484 None:intergenic
CACAATTGATTCCTTAAAAT+CGG 0.304203 2_2:-4982027 None:intergenic
CTTCTTTCACTTCGTATTGT+TGG 0.308122 2_2:+4983284 Msa0232730:CDS
TGTTTGGAGTGGAAGGTTCT+GGG 0.317287 2_2:-4981813 None:intergenic
AATCAATTGTGAAAGGATTA+GGG 0.318512 2_2:+4982039 Msa0232730:CDS
ACCCATGGAGATTTGGGTTC+AGG 0.327814 2_2:+4982307 Msa0232730:CDS
CGCAGATGATTTCAAGGTTA+CGG 0.334035 2_2:+4982067 Msa0232730:CDS
CCCAAAATGGCTTTGCTGCC+GGG 0.335455 2_2:+4983207 Msa0232730:CDS
GCAGATGATTTCAAGGTTAC+GGG 0.353614 2_2:+4982068 Msa0232730:CDS
ACACTGTCCTCCACGACAAC+AGG 0.360274 2_2:-4983806 None:intergenic
TCAACTATTCAGAGTTACTA+TGG 0.361332 2_2:+4984109 Msa0232730:three_prime_UTR
GGTCCTAAGGCGAATGAAAA+AGG 0.383211 2_2:+4983572 Msa0232730:CDS
TGGATCAAATGCAAACTTGT+TGG 0.387082 2_2:+4983520 Msa0232730:CDS
ACCCAAAATGGCTTTGCTGC+CGG 0.390746 2_2:+4983206 Msa0232730:CDS
TTGCCCATTTGCTTCTGATT+CGG 0.393820 2_2:+4984070 Msa0232730:three_prime_UTR
AGAAGTTGAAGGAAGGAGAT+GGG 0.402959 2_2:+4983663 Msa0232730:CDS
GGATCAAATGCAAACTTGTT+GGG 0.402992 2_2:+4983521 Msa0232730:CDS
TGCTTTGGGGTATGGAGGAT+TGG 0.403550 2_2:-4982000 None:intergenic
CATCAACCTCTTCCAATAAC+AGG 0.407635 2_2:+4983336 Msa0232730:CDS
GGTGTTGAAGAAAGTGGTTT+TGG 0.408885 2_2:+4983100 Msa0232730:CDS
GTTTCGAGGGTTTCCCTGAA+TGG 0.410584 2_2:+4983690 Msa0232730:CDS
TTAGGGTTGAGGAGGAAAAT+GGG 0.411301 2_2:+4982222 Msa0232730:CDS
ATCTTCTGTGTTGGGTCCTA+AGG 0.411358 2_2:+4983559 Msa0232730:CDS
CCTGTCTACCGTTGATCTCC+AGG 0.426754 2_2:+4983433 Msa0232730:CDS
AAATGCAACCTCACAGTCTC+AGG 0.426902 2_2:-4983722 None:intergenic
GAGGTGTTGGCTAAAGTTGA+TGG 0.432179 2_2:+4983746 Msa0232730:CDS
GGAGAGTCGGAGCTTCCTCC+TGG 0.433575 2_2:-4983451 None:intergenic
AGAAGCACAGGTTGGGCATT+CGG 0.434472 2_2:+4982103 Msa0232730:CDS
TGCTGCCGGGCTTCTAACGT+TGG 0.434900 2_2:+4983220 Msa0232730:CDS
AGCTGAAACGGAGCCAAAAC+GGG 0.439560 2_2:-4982278 None:intergenic
TCGGAAAATGCTTTGGGGTA+TGG 0.442147 2_2:-4982008 None:intergenic
CTTCAACCTGTTATTGGAAG+AGG 0.446577 2_2:-4983342 None:intergenic
AAGGCAAAGGGGATGGGCGG+AGG 0.452573 2_2:-4983884 None:intergenic
AGGAGATGGGATTAGTTTCG+AGG 0.452803 2_2:+4983676 Msa0232730:CDS
CGGTAAACTGGGTTGGAGTA+AGG 0.454457 2_2:-4983472 None:intergenic
AGATTGTTATCTTCTGTGTT+GGG 0.455474 2_2:+4983551 Msa0232730:CDS
CCACTAATTTACAAGGCAAA+GGG 0.456427 2_2:-4983896 None:intergenic
CCTGGAGATCAACGGTAGAC+AGG 0.458620 2_2:-4983433 None:intergenic
ATGCAGCATGATGTGGATGC+TGG 0.463221 2_2:+4983077 Msa0232730:intron
GAGATTGTTATCTTCTGTGT+TGG 0.464749 2_2:+4983550 Msa0232730:CDS
AAGAAGTTGAAGGAAGGAGA+TGG 0.470396 2_2:+4983662 Msa0232730:CDS
AAGCTGAAACGGAGCCAAAA+CGG 0.475289 2_2:-4982279 None:intergenic
GTTTAACGCAGATGATTTCA+AGG 0.479592 2_2:+4982061 Msa0232730:CDS
TTCACTTGCATGACTCTCTC+AGG 0.485508 2_2:-4983782 None:intergenic
ATCCTCGAGAAGCACAGGTT+GGG 0.486974 2_2:+4982096 Msa0232730:CDS
AACGGTAGAGGTAAAGTAAG+AGG 0.487215 2_2:-4983176 None:intergenic
GCCTTGTAAATTAGTGGCAA+GGG 0.492151 2_2:+4983902 Msa0232730:exon
TGGGTTCGGTTTAACGGTAG+AGG 0.500912 2_2:-4983188 None:intergenic
TCAGGCTGAGAAGAAGTTGA+AGG 0.503184 2_2:+4983652 Msa0232730:CDS
GTGAAAGAAGGGGAGCATCT+TGG 0.503890 2_2:-4983271 None:intergenic
ATGGGTCCAGCAAGCTGAAA+CGG 0.504325 2_2:-4982290 None:intergenic
ACCCTTGCCACTAATTTACA+AGG 0.504723 2_2:-4983903 None:intergenic
CAGGCTTAGTCCTCCATTCA+GGG 0.505236 2_2:-4983703 None:intergenic
TTATCCGAATCAGAAGCAAA+TGG 0.506731 2_2:-4984074 None:intergenic
GCGTCTTGCACCTGGTCTTG+TGG 0.507182 2_2:+4983370 Msa0232730:CDS
TGCCTTGTAAATTAGTGGCA+AGG 0.507310 2_2:+4983901 Msa0232730:exon
TCTTGAAGATACGAAACGTT+GGG 0.507488 2_2:+4982178 Msa0232730:CDS
CTCAGCCAACGTTAGAAGCC+CGG 0.510275 2_2:-4983225 None:intergenic
GCCACTAATTTACAAGGCAA+AGG 0.510330 2_2:-4983897 None:intergenic
GTTTCAGCTTGCTGGACCCA+TGG 0.510538 2_2:+4982292 Msa0232730:CDS
GTTTGGAGTGGAAGGTTCTG+GGG 0.511260 2_2:-4981812 None:intergenic
GAAGGGGCTTCAAGTGAAGA+AGG 0.512247 2_2:-4983308 None:intergenic
AATTTACAAGGCAAAGGGGA+TGG 0.512989 2_2:-4983891 None:intergenic
TTTAAGGAATCAATTGTGAA+AGG 0.515805 2_2:+4982032 Msa0232730:CDS
AAGCTTAAGCGTCTTGCACC+TGG 0.516176 2_2:+4983362 Msa0232730:CDS
ATTTACAAGGCAAAGGGGAT+GGG 0.517607 2_2:-4983890 None:intergenic
ATTTGATCCTCGAGAAGCAC+AGG 0.519830 2_2:+4982091 Msa0232730:CDS
CAACAATACGAAGTGAAAGA+AGG 0.520908 2_2:-4983283 None:intergenic
GCAGAAGTGATTATTGTGAA+TGG 0.524136 2_2:-4981907 None:intergenic
TGCTGGGGTGTTGAAGAAAG+TGG 0.527473 2_2:+4983094 Msa0232730:CDS
TATCCGAATCAGAAGCAAAT+GGG 0.529398 2_2:-4984073 None:intergenic
AGAGGTTGATGCAGAGGAAG+GGG 0.530015 2_2:-4983324 None:intergenic
ATTGGAAGAGGTTGATGCAG+AGG 0.530587 2_2:-4983330 None:intergenic
TGCAGCATGATGTGGATGCT+GGG 0.532335 2_2:+4983078 Msa0232730:intron
TACCCAAAAGGAATTGTAGA+GGG 0.535027 2_2:+4983943 Msa0232730:three_prime_UTR
ATGGGCGGAGGCTGAACGAG+TGG 0.546452 2_2:-4983872 None:intergenic
TCCTGAACCCAAATCTCCAT+GGG 0.548373 2_2:-4982308 None:intergenic
AACAATACGAAGTGAAAGAA+GGG 0.549371 2_2:-4983282 None:intergenic
GACGATAACTCCACAAGACC+AGG 0.550266 2_2:-4983380 None:intergenic
GGAGATGGGATTAGTTTCGA+GGG 0.550774 2_2:+4983677 Msa0232730:CDS
GAAGAGGTTGATGCAGAGGA+AGG 0.553179 2_2:-4983326 None:intergenic
AGGCCACAATGCGGTAAACT+GGG 0.554600 2_2:-4983483 None:intergenic
ATCCTGAACCCAAATCTCCA+TGG 0.560019 2_2:-4982309 None:intergenic
GGGGTATGGAGGATTGGTAT+CGG 0.561559 2_2:-4981994 None:intergenic
GATCCTCGAGAAGCACAGGT+TGG 0.562913 2_2:+4982095 Msa0232730:CDS
TGCATTTGATCCATTAAGAG+AGG 0.563952 2_2:-4983510 None:intergenic
GATTTGGGTTCAGGATGCTA+AGG 0.567395 2_2:+4982316 Msa0232730:CDS
GGTTGAGGAGGAAAATGGGT+TGG 0.571456 2_2:+4982226 Msa0232730:CDS
TGAGGAGGAAAATGGGTTGG+TGG 0.571762 2_2:+4982229 Msa0232730:CDS
CATCTCCGCCATGCTTCTCG+TGG 0.574647 2_2:+4983248 Msa0232730:CDS
CTGGAGATCAACGGTAGACA+GGG 0.576437 2_2:-4983432 None:intergenic
CATCTTGGCCACGAGAAGCA+TGG 0.581167 2_2:-4983256 None:intergenic
AAGAGGTTGATGCAGAGGAA+GGG 0.582205 2_2:-4983325 None:intergenic
GAAAATGCTTTGGGGTATGG+AGG 0.583756 2_2:-4982005 None:intergenic
CACAATGCGGTAAACTGGGT+TGG 0.588789 2_2:-4983479 None:intergenic
TGCCCAACCTGTGCTTCTCG+AGG 0.589202 2_2:-4982098 None:intergenic
TCGAGGGTTTCCCTGAATGG+AGG 0.592424 2_2:+4983693 Msa0232730:CDS
ACCCAAAAGGAATTGTAGAG+GGG 0.595034 2_2:+4983944 Msa0232730:three_prime_UTR
TGGGTTGGAGTAAGGAGAGT+CGG 0.596767 2_2:-4983464 None:intergenic
GGTGCAGTGGTTACTGTGAA+AGG 0.598016 2_2:+4983128 Msa0232730:CDS
ATTGGTATCGGAAGCGAGGG+AGG 0.605329 2_2:-4981982 None:intergenic
TACAAGGCAAAGGGGATGGG+CGG 0.605840 2_2:-4983887 None:intergenic
GCTGAGAAGAAGTTGAAGGA+AGG 0.608223 2_2:+4983656 Msa0232730:CDS
TTGGTATATGCAGCATGATG+TGG 0.609482 2_2:+4983070 Msa0232730:intron
TTCTTGAAGATACGAAACGT+TGG 0.611285 2_2:+4982177 Msa0232730:CDS
GAGGATTGGTATCGGAAGCG+AGG 0.612928 2_2:-4981986 None:intergenic
AGCTTCCTCCTGGAGATCAA+CGG 0.614054 2_2:-4983441 None:intergenic
TTACCCAAAAGGAATTGTAG+AGG 0.618591 2_2:+4983942 Msa0232730:three_prime_UTR
GCAAGTGAACCCTGTTGTCG+TGG 0.619738 2_2:+4983796 Msa0232730:CDS
ACGTTTACTATATATATCAA+AGG 0.620747 2_2:-4983979 None:intergenic
CAACCCAGTTTACCGCATTG+TGG 0.622372 2_2:+4983480 Msa0232730:CDS
CACTAATTTACAAGGCAAAG+GGG 0.632588 2_2:-4983895 None:intergenic
GTAGAGGTAAAGTAAGAGGA+TGG 0.641794 2_2:-4983172 None:intergenic
AGGATTGGTATCGGAAGCGA+GGG 0.647115 2_2:-4981985 None:intergenic
TAAAATCGGAAAATGCTTTG+GGG 0.658109 2_2:-4982013 None:intergenic
ATCAGCTTTCAACAACCTGA+AGG 0.665803 2_2:-4983597 None:intergenic
GCAGCATGATGTGGATGCTG+GGG 0.665872 2_2:+4983079 Msa0232730:intron
CACTGTCCTCCACGACAACA+GGG 0.668924 2_2:-4983805 None:intergenic
TGTTGTCGTGGAGGACAGTG+TGG 0.679306 2_2:+4983808 Msa0232730:CDS
ACAATACGAAGTGAAAGAAG+GGG 0.685811 2_2:-4983281 None:intergenic
GATCCATTAAGAGAGGCAAG+AGG 0.685845 2_2:-4983503 None:intergenic
GGACTAAGCCTGAGACTGTG+AGG 0.704209 2_2:+4983714 Msa0232730:CDS
AGTGAACCCTGTTGTCGTGG+AGG 0.705653 2_2:+4983799 Msa0232730:CDS
CTTGGCCACGAGAAGCATGG+CGG 0.706435 2_2:-4983253 None:intergenic
GTCTACCGTTGATCTCCAGG+AGG 0.718401 2_2:+4983436 Msa0232730:CDS
AGAGGCAAGAGGCCACAATG+CGG 0.786297 2_2:-4983492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTGGTTAAATAAATA+GGG - chr2_2:4981845-4981864 None:intergenic 15.0%
!!! TGTTTTTTGGTTAAATAAAT+AGG - chr2_2:4981846-4981865 None:intergenic 15.0%
!!! TGTAATTTTTACTTGTTTTT+TGG - chr2_2:4981859-4981878 None:intergenic 15.0%
!! CATAATAGATATTATGATTA+TGG - chr2_2:4982846-4982865 None:intergenic 15.0%
!! AAATTCCAATCATATATTTA+GGG - chr2_2:4982942-4982961 None:intergenic 15.0%
!! TAAATTCCAATCATATATTT+AGG - chr2_2:4982943-4982962 None:intergenic 15.0%
!!! GTTTTTTGGTTAAATAAATA+GGG - chr2_2:4981845-4981864 None:intergenic 15.0%
!!! TGTTTTTTGGTTAAATAAAT+AGG - chr2_2:4981846-4981865 None:intergenic 15.0%
!!! TGTAATTTTTACTTGTTTTT+TGG - chr2_2:4981859-4981878 None:intergenic 15.0%
!! CATAATAGATATTATGATTA+TGG - chr2_2:4982846-4982865 None:intergenic 15.0%
!! AAATTCCAATCATATATTTA+GGG - chr2_2:4982942-4982961 None:intergenic 15.0%
!! TAAATTCCAATCATATATTT+AGG - chr2_2:4982943-4982962 None:intergenic 15.0%
!!! AATTTTAATTGCACACATTA+TGG + chr2_2:4982498-4982517 Msa0232730:intron 20.0%
!!! TTTTCAAATCATCACATAAA+CGG - chr2_2:4982603-4982622 None:intergenic 20.0%
!! ATCACTATAAAATGACTTAA+AGG - chr2_2:4982698-4982717 None:intergenic 20.0%
!! GTTTACAAAAGTAAATGATT+TGG + chr2_2:4982865-4982884 Msa0232730:intron 20.0%
!! ACGTTTACTATATATATCAA+AGG - chr2_2:4983982-4984001 None:intergenic 20.0%
!! AAAAAAACTTTCTCATTACT+CGG - chr2_2:4984028-4984047 None:intergenic 20.0%
!!! AATTTTAATTGCACACATTA+TGG + chr2_2:4982498-4982517 Msa0232730:intron 20.0%
!!! TTTTCAAATCATCACATAAA+CGG - chr2_2:4982603-4982622 None:intergenic 20.0%
!! ATCACTATAAAATGACTTAA+AGG - chr2_2:4982698-4982717 None:intergenic 20.0%
!! GTTTACAAAAGTAAATGATT+TGG + chr2_2:4982865-4982884 Msa0232730:intron 20.0%
!! ACGTTTACTATATATATCAA+AGG - chr2_2:4983982-4984001 None:intergenic 20.0%
!! AAAAAAACTTTCTCATTACT+CGG - chr2_2:4984028-4984047 None:intergenic 20.0%
!! ATAAATAGGGAGTTTTTGTT+TGG - chr2_2:4981832-4981851 None:intergenic 25.0%
!!! ACAATGAAATCGCTTATTTT+CGG + chr2_2:4981936-4981955 Msa0232730:exon 25.0%
! TTAAAATCGGAAAATGCTTT+GGG - chr2_2:4982017-4982036 None:intergenic 25.0%
!! CACAATTGATTCCTTAAAAT+CGG - chr2_2:4982030-4982049 None:intergenic 25.0%
! TTTAAGGAATCAATTGTGAA+AGG + chr2_2:4982032-4982051 Msa0232730:CDS 25.0%
! AATCAATTGTGAAAGGATTA+GGG + chr2_2:4982039-4982058 Msa0232730:CDS 25.0%
! TGAGTACAATATTAGAAACT+AGG + chr2_2:4982571-4982590 Msa0232730:intron 25.0%
! TGTGAAATTATGAAGATTGA+AGG + chr2_2:4982980-4982999 Msa0232730:intron 25.0%
! GTGAAATTATGAAGATTGAA+GGG + chr2_2:4982981-4983000 Msa0232730:intron 25.0%
!! AAAATGACTTGATGTTGATT+TGG + chr2_2:4983051-4983070 Msa0232730:intron 25.0%
!! CAAATATGCTGACTAAAAAT+GGG + chr2_2:4983834-4983853 Msa0232730:CDS 25.0%
!! TTTTGTAAACTTTACCCAAA+AGG + chr2_2:4983931-4983950 Msa0232730:three_prime_UTR 25.0%
! TTAACTGTATTCTTAGTTTC+TGG + chr2_2:4984200-4984219 Msa0232730:three_prime_UTR 25.0%
!! ATAAATAGGGAGTTTTTGTT+TGG - chr2_2:4981832-4981851 None:intergenic 25.0%
!!! ACAATGAAATCGCTTATTTT+CGG + chr2_2:4981936-4981955 Msa0232730:exon 25.0%
! TTAAAATCGGAAAATGCTTT+GGG - chr2_2:4982017-4982036 None:intergenic 25.0%
!! CACAATTGATTCCTTAAAAT+CGG - chr2_2:4982030-4982049 None:intergenic 25.0%
! TTTAAGGAATCAATTGTGAA+AGG + chr2_2:4982032-4982051 Msa0232730:CDS 25.0%
! AATCAATTGTGAAAGGATTA+GGG + chr2_2:4982039-4982058 Msa0232730:CDS 25.0%
! TGAGTACAATATTAGAAACT+AGG + chr2_2:4982571-4982590 Msa0232730:intron 25.0%
! TGTGAAATTATGAAGATTGA+AGG + chr2_2:4982980-4982999 Msa0232730:intron 25.0%
! GTGAAATTATGAAGATTGAA+GGG + chr2_2:4982981-4983000 Msa0232730:intron 25.0%
!! AAAATGACTTGATGTTGATT+TGG + chr2_2:4983051-4983070 Msa0232730:intron 25.0%
!! CAAATATGCTGACTAAAAAT+GGG + chr2_2:4983834-4983853 Msa0232730:CDS 25.0%
!! TTTTGTAAACTTTACCCAAA+AGG + chr2_2:4983931-4983950 Msa0232730:three_prime_UTR 25.0%
TAAAATCGGAAAATGCTTTG+GGG - chr2_2:4982016-4982035 None:intergenic 30.0%
CTTAAAATCGGAAAATGCTT+TGG - chr2_2:4982018-4982037 None:intergenic 30.0%
!! CAAAGCATTTTCCGATTTTA+AGG + chr2_2:4982016-4982035 Msa0232730:CDS 30.0%
GAATCAATTGTGAAAGGATT+AGG + chr2_2:4982038-4982057 Msa0232730:CDS 30.0%
GTATCTTCAAGAAGCTTAAA+TGG - chr2_2:4982170-4982189 None:intergenic 30.0%
!! ATGTTGATCTTCCCATTTTT+AGG + chr2_2:4982204-4982223 Msa0232730:CDS 30.0%
!! TGTTGATCTTCCCATTTTTA+GGG + chr2_2:4982205-4982224 Msa0232730:CDS 30.0%
!! ATTAGAGAAAAGCACTTACA+GGG - chr2_2:4982358-4982377 None:intergenic 30.0%
TTGCACACATTATGGTTATT+TGG + chr2_2:4982506-4982525 Msa0232730:intron 30.0%
GTTATTTGGAGGATTAATCT+AGG + chr2_2:4982520-4982539 Msa0232730:intron 30.0%
CCAATCATATATTTAGGGAA+TGG - chr2_2:4982937-4982956 None:intergenic 30.0%
CCATTCCCTAAATATATGAT+TGG + chr2_2:4982934-4982953 Msa0232730:intron 30.0%
GTGTAGTTTATAGAGTAAGA+TGG + chr2_2:4983005-4983024 Msa0232730:intron 30.0%
AACAATACGAAGTGAAAGAA+GGG - chr2_2:4983285-4983304 None:intergenic 30.0%
AGATTGTTATCTTCTGTGTT+GGG + chr2_2:4983551-4983570 Msa0232730:CDS 30.0%
!!! CCATTTTTAGTCAGCATATT+TGG - chr2_2:4983836-4983855 None:intergenic 30.0%
! CCAAATATGCTGACTAAAAA+TGG + chr2_2:4983833-4983852 Msa0232730:CDS 30.0%
TCAACTATTCAGAGTTACTA+TGG + chr2_2:4984109-4984128 Msa0232730:three_prime_UTR 30.0%
TAAAATCGGAAAATGCTTTG+GGG - chr2_2:4982016-4982035 None:intergenic 30.0%
CTTAAAATCGGAAAATGCTT+TGG - chr2_2:4982018-4982037 None:intergenic 30.0%
!! CAAAGCATTTTCCGATTTTA+AGG + chr2_2:4982016-4982035 Msa0232730:CDS 30.0%
GAATCAATTGTGAAAGGATT+AGG + chr2_2:4982038-4982057 Msa0232730:CDS 30.0%
GTATCTTCAAGAAGCTTAAA+TGG - chr2_2:4982170-4982189 None:intergenic 30.0%
!! ATGTTGATCTTCCCATTTTT+AGG + chr2_2:4982204-4982223 Msa0232730:CDS 30.0%
!! TGTTGATCTTCCCATTTTTA+GGG + chr2_2:4982205-4982224 Msa0232730:CDS 30.0%
!! ATTAGAGAAAAGCACTTACA+GGG - chr2_2:4982358-4982377 None:intergenic 30.0%
TTGCACACATTATGGTTATT+TGG + chr2_2:4982506-4982525 Msa0232730:intron 30.0%
GTTATTTGGAGGATTAATCT+AGG + chr2_2:4982520-4982539 Msa0232730:intron 30.0%
CCAATCATATATTTAGGGAA+TGG - chr2_2:4982937-4982956 None:intergenic 30.0%
CCATTCCCTAAATATATGAT+TGG + chr2_2:4982934-4982953 Msa0232730:intron 30.0%
GTGTAGTTTATAGAGTAAGA+TGG + chr2_2:4983005-4983024 Msa0232730:intron 30.0%
AACAATACGAAGTGAAAGAA+GGG - chr2_2:4983285-4983304 None:intergenic 30.0%
AGATTGTTATCTTCTGTGTT+GGG + chr2_2:4983551-4983570 Msa0232730:CDS 30.0%
!!! CCATTTTTAGTCAGCATATT+TGG - chr2_2:4983836-4983855 None:intergenic 30.0%
! CCAAATATGCTGACTAAAAA+TGG + chr2_2:4983833-4983852 Msa0232730:CDS 30.0%
TCAACTATTCAGAGTTACTA+TGG + chr2_2:4984109-4984128 Msa0232730:three_prime_UTR 30.0%
GCAGAAGTGATTATTGTGAA+TGG - chr2_2:4981910-4981929 None:intergenic 35.0%
GTTTAACGCAGATGATTTCA+AGG + chr2_2:4982061-4982080 Msa0232730:CDS 35.0%
TTCTTGAAGATACGAAACGT+TGG + chr2_2:4982177-4982196 Msa0232730:CDS 35.0%
TCTTGAAGATACGAAACGTT+GGG + chr2_2:4982178-4982197 Msa0232730:CDS 35.0%
!! AAAATGGGTTGGTGGAAAAA+CGG + chr2_2:4982237-4982256 Msa0232730:CDS 35.0%
!! GATTAGAGAAAAGCACTTAC+AGG - chr2_2:4982359-4982378 None:intergenic 35.0%
CACACATTATGGTTATTTGG+AGG + chr2_2:4982509-4982528 Msa0232730:intron 35.0%
ATTTGGAGGATTAATCTAGG+TGG + chr2_2:4982523-4982542 Msa0232730:intron 35.0%
ATTTGAAAATGCCCTCAAGA+GGG + chr2_2:4982614-4982633 Msa0232730:intron 35.0%
GCTATAAATATCCCTCTTGA+GGG - chr2_2:4982628-4982647 None:intergenic 35.0%
ATAAAATGACTTAAAGGCCC+AGG - chr2_2:4982692-4982711 None:intergenic 35.0%
!! ATACTTTTAGAAGCCTGTTG+AGG + chr2_2:4982722-4982741 Msa0232730:intron 35.0%
TTGTGCCCTTAAGGATATAT+TGG + chr2_2:4982816-4982835 Msa0232730:intron 35.0%
GACTGCCAATATATCCTTAA+GGG - chr2_2:4982824-4982843 None:intergenic 35.0%
ATATTACCTTATGTGACACC+TGG + chr2_2:4982909-4982928 Msa0232730:intron 35.0%
TATATTTAGGGAATGGAACC+AGG - chr2_2:4982930-4982949 None:intergenic 35.0%
TAAGATGGTGTAGTTGAATG+TGG + chr2_2:4983020-4983039 Msa0232730:intron 35.0%
ACAATACGAAGTGAAAGAAG+GGG - chr2_2:4983284-4983303 None:intergenic 35.0%
CAACAATACGAAGTGAAAGA+AGG - chr2_2:4983286-4983305 None:intergenic 35.0%
CTTCTTTCACTTCGTATTGT+TGG + chr2_2:4983284-4983303 Msa0232730:CDS 35.0%
CTTAAGCTTCAACCTGTTAT+TGG - chr2_2:4983351-4983370 None:intergenic 35.0%
TGCATTTGATCCATTAAGAG+AGG - chr2_2:4983513-4983532 None:intergenic 35.0%
TGGATCAAATGCAAACTTGT+TGG + chr2_2:4983520-4983539 Msa0232730:CDS 35.0%
! GGATCAAATGCAAACTTGTT+GGG + chr2_2:4983521-4983540 Msa0232730:CDS 35.0%
GAGATTGTTATCTTCTGTGT+TGG + chr2_2:4983550-4983569 Msa0232730:CDS 35.0%
! TTTTGTCAAGATAGGCTTTC+AGG + chr2_2:4983634-4983653 Msa0232730:CDS 35.0%
CACTAATTTACAAGGCAAAG+GGG - chr2_2:4983898-4983917 None:intergenic 35.0%
CCACTAATTTACAAGGCAAA+GGG - chr2_2:4983899-4983918 None:intergenic 35.0%
TTACCCAAAAGGAATTGTAG+AGG + chr2_2:4983942-4983961 Msa0232730:three_prime_UTR 35.0%
TACCCAAAAGGAATTGTAGA+GGG + chr2_2:4983943-4983962 Msa0232730:three_prime_UTR 35.0%
TATCCGAATCAGAAGCAAAT+GGG - chr2_2:4984076-4984095 None:intergenic 35.0%
TTATCCGAATCAGAAGCAAA+TGG - chr2_2:4984077-4984096 None:intergenic 35.0%
GCAGAAGTGATTATTGTGAA+TGG - chr2_2:4981910-4981929 None:intergenic 35.0%
GTTTAACGCAGATGATTTCA+AGG + chr2_2:4982061-4982080 Msa0232730:CDS 35.0%
TTCTTGAAGATACGAAACGT+TGG + chr2_2:4982177-4982196 Msa0232730:CDS 35.0%
TCTTGAAGATACGAAACGTT+GGG + chr2_2:4982178-4982197 Msa0232730:CDS 35.0%
!! AAAATGGGTTGGTGGAAAAA+CGG + chr2_2:4982237-4982256 Msa0232730:CDS 35.0%
!! GATTAGAGAAAAGCACTTAC+AGG - chr2_2:4982359-4982378 None:intergenic 35.0%
CACACATTATGGTTATTTGG+AGG + chr2_2:4982509-4982528 Msa0232730:intron 35.0%
ATTTGGAGGATTAATCTAGG+TGG + chr2_2:4982523-4982542 Msa0232730:intron 35.0%
ATTTGAAAATGCCCTCAAGA+GGG + chr2_2:4982614-4982633 Msa0232730:intron 35.0%
GCTATAAATATCCCTCTTGA+GGG - chr2_2:4982628-4982647 None:intergenic 35.0%
ATAAAATGACTTAAAGGCCC+AGG - chr2_2:4982692-4982711 None:intergenic 35.0%
!! ATACTTTTAGAAGCCTGTTG+AGG + chr2_2:4982722-4982741 Msa0232730:intron 35.0%
TTGTGCCCTTAAGGATATAT+TGG + chr2_2:4982816-4982835 Msa0232730:intron 35.0%
GACTGCCAATATATCCTTAA+GGG - chr2_2:4982824-4982843 None:intergenic 35.0%
ATATTACCTTATGTGACACC+TGG + chr2_2:4982909-4982928 Msa0232730:intron 35.0%
TATATTTAGGGAATGGAACC+AGG - chr2_2:4982930-4982949 None:intergenic 35.0%
TAAGATGGTGTAGTTGAATG+TGG + chr2_2:4983020-4983039 Msa0232730:intron 35.0%
ACAATACGAAGTGAAAGAAG+GGG - chr2_2:4983284-4983303 None:intergenic 35.0%
CAACAATACGAAGTGAAAGA+AGG - chr2_2:4983286-4983305 None:intergenic 35.0%
CTTCTTTCACTTCGTATTGT+TGG + chr2_2:4983284-4983303 Msa0232730:CDS 35.0%
CTTAAGCTTCAACCTGTTAT+TGG - chr2_2:4983351-4983370 None:intergenic 35.0%
TGCATTTGATCCATTAAGAG+AGG - chr2_2:4983513-4983532 None:intergenic 35.0%
TGGATCAAATGCAAACTTGT+TGG + chr2_2:4983520-4983539 Msa0232730:CDS 35.0%
! GGATCAAATGCAAACTTGTT+GGG + chr2_2:4983521-4983540 Msa0232730:CDS 35.0%
GAGATTGTTATCTTCTGTGT+TGG + chr2_2:4983550-4983569 Msa0232730:CDS 35.0%
! TTTTGTCAAGATAGGCTTTC+AGG + chr2_2:4983634-4983653 Msa0232730:CDS 35.0%
CACTAATTTACAAGGCAAAG+GGG - chr2_2:4983898-4983917 None:intergenic 35.0%
CCACTAATTTACAAGGCAAA+GGG - chr2_2:4983899-4983918 None:intergenic 35.0%
TTACCCAAAAGGAATTGTAG+AGG + chr2_2:4983942-4983961 Msa0232730:three_prime_UTR 35.0%
TACCCAAAAGGAATTGTAGA+GGG + chr2_2:4983943-4983962 Msa0232730:three_prime_UTR 35.0%
TATCCGAATCAGAAGCAAAT+GGG - chr2_2:4984076-4984095 None:intergenic 35.0%
TTATCCGAATCAGAAGCAAA+TGG - chr2_2:4984077-4984096 None:intergenic 35.0%
!! GAGTTTTTGTTTGGAGTGGA+AGG - chr2_2:4981823-4981842 None:intergenic 40.0%
!! TAGGGAGTTTTTGTTTGGAG+TGG - chr2_2:4981827-4981846 None:intergenic 40.0%
CGCAGATGATTTCAAGGTTA+CGG + chr2_2:4982067-4982086 Msa0232730:CDS 40.0%
GCAGATGATTTCAAGGTTAC+GGG + chr2_2:4982068-4982087 Msa0232730:CDS 40.0%
!!! TCTTCCCATTTTTAGGGTTG+AGG + chr2_2:4982211-4982230 Msa0232730:CDS 40.0%
TCCTCCTCAACCCTAAAAAT+GGG - chr2_2:4982218-4982237 None:intergenic 40.0%
TTCCTCCTCAACCCTAAAAA+TGG - chr2_2:4982219-4982238 None:intergenic 40.0%
! TTTAGGGTTGAGGAGGAAAA+TGG + chr2_2:4982221-4982240 Msa0232730:CDS 40.0%
TTAGGGTTGAGGAGGAAAAT+GGG + chr2_2:4982222-4982241 Msa0232730:CDS 40.0%
!! AAATGGGTTGGTGGAAAAAC+GGG + chr2_2:4982238-4982257 Msa0232730:CDS 40.0%
!! AAAAACGGGTTGACGGAAAT+GGG + chr2_2:4982252-4982271 Msa0232730:CDS 40.0%
GATTTGAAAATGCCCTCAAG+AGG + chr2_2:4982613-4982632 Msa0232730:intron 40.0%
GGCTATAAATATCCCTCTTG+AGG - chr2_2:4982629-4982648 None:intergenic 40.0%
GGATATTTATAGCCCTTCGT+GGG + chr2_2:4982635-4982654 Msa0232730:intron 40.0%
GGACTGCCAATATATCCTTA+AGG - chr2_2:4982825-4982844 None:intergenic 40.0%
TTGGTATATGCAGCATGATG+TGG + chr2_2:4983070-4983089 Msa0232730:intron 40.0%
!! GGTGTTGAAGAAAGTGGTTT+TGG + chr2_2:4983100-4983119 Msa0232730:CDS 40.0%
!!! AAGAAAGTGGTTTTGGCTGA+TGG + chr2_2:4983107-4983126 Msa0232730:CDS 40.0%
GTAGAGGTAAAGTAAGAGGA+TGG - chr2_2:4983175-4983194 None:intergenic 40.0%
AACGGTAGAGGTAAAGTAAG+AGG - chr2_2:4983179-4983198 None:intergenic 40.0%
!!! CCATTTTGGGTTCGGTTTAA+CGG - chr2_2:4983197-4983216 None:intergenic 40.0%
CATCAACCTCTTCCAATAAC+AGG + chr2_2:4983336-4983355 Msa0232730:CDS 40.0%
CTTCAACCTGTTATTGGAAG+AGG - chr2_2:4983345-4983364 None:intergenic 40.0%
!! CAGGGAAGTGTCAACTAATT+TGG - chr2_2:4983417-4983436 None:intergenic 40.0%
!! GAACCTTTTTCATTCGCCTT+AGG - chr2_2:4983578-4983597 None:intergenic 40.0%
CGAATGAAAAAGGTTCCTTC+AGG + chr2_2:4983582-4983601 Msa0232730:CDS 40.0%
ATCAGCTTTCAACAACCTGA+AGG - chr2_2:4983600-4983619 None:intergenic 40.0%
! GCTCAGACTTTTGTCAAGAT+AGG + chr2_2:4983626-4983645 Msa0232730:CDS 40.0%
AAGAAGTTGAAGGAAGGAGA+TGG + chr2_2:4983662-4983681 Msa0232730:CDS 40.0%
AGAAGTTGAAGGAAGGAGAT+GGG + chr2_2:4983663-4983682 Msa0232730:CDS 40.0%
ATTTACAAGGCAAAGGGGAT+GGG - chr2_2:4983893-4983912 None:intergenic 40.0%
AATTTACAAGGCAAAGGGGA+TGG - chr2_2:4983894-4983913 None:intergenic 40.0%
CCCTTTGCCTTGTAAATTAG+TGG + chr2_2:4983896-4983915 Msa0232730:exon 40.0%
GCCACTAATTTACAAGGCAA+AGG - chr2_2:4983900-4983919 None:intergenic 40.0%
TGCCTTGTAAATTAGTGGCA+AGG + chr2_2:4983901-4983920 Msa0232730:exon 40.0%
GCCTTGTAAATTAGTGGCAA+GGG + chr2_2:4983902-4983921 Msa0232730:exon 40.0%
ACCCTTGCCACTAATTTACA+AGG - chr2_2:4983906-4983925 None:intergenic 40.0%
ACCCAAAAGGAATTGTAGAG+GGG + chr2_2:4983944-4983963 Msa0232730:three_prime_UTR 40.0%
! TCCCCTCTACAATTCCTTTT+GGG - chr2_2:4983948-4983967 None:intergenic 40.0%
! ATCCCCTCTACAATTCCTTT+TGG - chr2_2:4983949-4983968 None:intergenic 40.0%
TTGCCCATTTGCTTCTGATT+CGG + chr2_2:4984070-4984089 Msa0232730:three_prime_UTR 40.0%
!! GAGTTTTTGTTTGGAGTGGA+AGG - chr2_2:4981823-4981842 None:intergenic 40.0%
!! TAGGGAGTTTTTGTTTGGAG+TGG - chr2_2:4981827-4981846 None:intergenic 40.0%
CGCAGATGATTTCAAGGTTA+CGG + chr2_2:4982067-4982086 Msa0232730:CDS 40.0%
GCAGATGATTTCAAGGTTAC+GGG + chr2_2:4982068-4982087 Msa0232730:CDS 40.0%
!!! TCTTCCCATTTTTAGGGTTG+AGG + chr2_2:4982211-4982230 Msa0232730:CDS 40.0%
TCCTCCTCAACCCTAAAAAT+GGG - chr2_2:4982218-4982237 None:intergenic 40.0%
TTCCTCCTCAACCCTAAAAA+TGG - chr2_2:4982219-4982238 None:intergenic 40.0%
! TTTAGGGTTGAGGAGGAAAA+TGG + chr2_2:4982221-4982240 Msa0232730:CDS 40.0%
TTAGGGTTGAGGAGGAAAAT+GGG + chr2_2:4982222-4982241 Msa0232730:CDS 40.0%
!! AAATGGGTTGGTGGAAAAAC+GGG + chr2_2:4982238-4982257 Msa0232730:CDS 40.0%
!! AAAAACGGGTTGACGGAAAT+GGG + chr2_2:4982252-4982271 Msa0232730:CDS 40.0%
GATTTGAAAATGCCCTCAAG+AGG + chr2_2:4982613-4982632 Msa0232730:intron 40.0%
GGCTATAAATATCCCTCTTG+AGG - chr2_2:4982629-4982648 None:intergenic 40.0%
GGATATTTATAGCCCTTCGT+GGG + chr2_2:4982635-4982654 Msa0232730:intron 40.0%
GGACTGCCAATATATCCTTA+AGG - chr2_2:4982825-4982844 None:intergenic 40.0%
TTGGTATATGCAGCATGATG+TGG + chr2_2:4983070-4983089 Msa0232730:intron 40.0%
!! GGTGTTGAAGAAAGTGGTTT+TGG + chr2_2:4983100-4983119 Msa0232730:CDS 40.0%
!!! AAGAAAGTGGTTTTGGCTGA+TGG + chr2_2:4983107-4983126 Msa0232730:CDS 40.0%
GTAGAGGTAAAGTAAGAGGA+TGG - chr2_2:4983175-4983194 None:intergenic 40.0%
AACGGTAGAGGTAAAGTAAG+AGG - chr2_2:4983179-4983198 None:intergenic 40.0%
!!! CCATTTTGGGTTCGGTTTAA+CGG - chr2_2:4983197-4983216 None:intergenic 40.0%
CATCAACCTCTTCCAATAAC+AGG + chr2_2:4983336-4983355 Msa0232730:CDS 40.0%
CTTCAACCTGTTATTGGAAG+AGG - chr2_2:4983345-4983364 None:intergenic 40.0%
!! CAGGGAAGTGTCAACTAATT+TGG - chr2_2:4983417-4983436 None:intergenic 40.0%
!! GAACCTTTTTCATTCGCCTT+AGG - chr2_2:4983578-4983597 None:intergenic 40.0%
CGAATGAAAAAGGTTCCTTC+AGG + chr2_2:4983582-4983601 Msa0232730:CDS 40.0%
ATCAGCTTTCAACAACCTGA+AGG - chr2_2:4983600-4983619 None:intergenic 40.0%
! GCTCAGACTTTTGTCAAGAT+AGG + chr2_2:4983626-4983645 Msa0232730:CDS 40.0%
AAGAAGTTGAAGGAAGGAGA+TGG + chr2_2:4983662-4983681 Msa0232730:CDS 40.0%
AGAAGTTGAAGGAAGGAGAT+GGG + chr2_2:4983663-4983682 Msa0232730:CDS 40.0%
ATTTACAAGGCAAAGGGGAT+GGG - chr2_2:4983893-4983912 None:intergenic 40.0%
AATTTACAAGGCAAAGGGGA+TGG - chr2_2:4983894-4983913 None:intergenic 40.0%
CCCTTTGCCTTGTAAATTAG+TGG + chr2_2:4983896-4983915 Msa0232730:exon 40.0%
GCCACTAATTTACAAGGCAA+AGG - chr2_2:4983900-4983919 None:intergenic 40.0%
TGCCTTGTAAATTAGTGGCA+AGG + chr2_2:4983901-4983920 Msa0232730:exon 40.0%
GCCTTGTAAATTAGTGGCAA+GGG + chr2_2:4983902-4983921 Msa0232730:exon 40.0%
ACCCTTGCCACTAATTTACA+AGG - chr2_2:4983906-4983925 None:intergenic 40.0%
ACCCAAAAGGAATTGTAGAG+GGG + chr2_2:4983944-4983963 Msa0232730:three_prime_UTR 40.0%
! TCCCCTCTACAATTCCTTTT+GGG - chr2_2:4983948-4983967 None:intergenic 40.0%
! ATCCCCTCTACAATTCCTTT+TGG - chr2_2:4983949-4983968 None:intergenic 40.0%
TTGCCCATTTGCTTCTGATT+CGG + chr2_2:4984070-4984089 Msa0232730:three_prime_UTR 40.0%
! TGTTTGGAGTGGAAGGTTCT+GGG - chr2_2:4981816-4981835 None:intergenic 45.0%
! TTGTTTGGAGTGGAAGGTTC+TGG - chr2_2:4981817-4981836 None:intergenic 45.0%
!! GAAAATGCTTTGGGGTATGG+AGG - chr2_2:4982008-4982027 None:intergenic 45.0%
!! TCGGAAAATGCTTTGGGGTA+TGG - chr2_2:4982011-4982030 None:intergenic 45.0%
! ATTTGATCCTCGAGAAGCAC+AGG + chr2_2:4982091-4982110 Msa0232730:CDS 45.0%
!!! TCCCATTTTTAGGGTTGAGG+AGG + chr2_2:4982214-4982233 Msa0232730:CDS 45.0%
!! TTGGTGGAAAAACGGGTTGA+CGG + chr2_2:4982245-4982264 Msa0232730:CDS 45.0%
!! GAAAAACGGGTTGACGGAAA+TGG + chr2_2:4982251-4982270 Msa0232730:CDS 45.0%
AAGCTGAAACGGAGCCAAAA+CGG - chr2_2:4982282-4982301 None:intergenic 45.0%
TCCTGAACCCAAATCTCCAT+GGG - chr2_2:4982311-4982330 None:intergenic 45.0%
ATCCTGAACCCAAATCTCCA+TGG - chr2_2:4982312-4982331 None:intergenic 45.0%
! GATTTGGGTTCAGGATGCTA+AGG + chr2_2:4982316-4982335 Msa0232730:CDS 45.0%
GGGATATTTATAGCCCTTCG+TGG + chr2_2:4982634-4982653 Msa0232730:intron 45.0%
CTAGAAAACAAGCCCACGAA+GGG - chr2_2:4982650-4982669 None:intergenic 45.0%
ACTAGAAAACAAGCCCACGA+AGG - chr2_2:4982651-4982670 None:intergenic 45.0%
!! CTTTTAGAAGCCTGTTGAGG+CGG + chr2_2:4982725-4982744 Msa0232730:intron 45.0%
! ATGGAACCAGGTGTCACATA+AGG - chr2_2:4982918-4982937 None:intergenic 45.0%
CCGTTAAACCGAACCCAAAA+TGG + chr2_2:4983194-4983213 Msa0232730:CDS 45.0%
!!! CAGCAAAGCCATTTTGGGTT+CGG - chr2_2:4983205-4983224 None:intergenic 45.0%
!! AAGAGGTTGATGCAGAGGAA+GGG - chr2_2:4983328-4983347 None:intergenic 45.0%
!! ATTGGAAGAGGTTGATGCAG+AGG - chr2_2:4983333-4983352 None:intergenic 45.0%
GATCCATTAAGAGAGGCAAG+AGG - chr2_2:4983506-4983525 None:intergenic 45.0%
ATCTTCTGTGTTGGGTCCTA+AGG + chr2_2:4983559-4983578 Msa0232730:CDS 45.0%
GGTCCTAAGGCGAATGAAAA+AGG + chr2_2:4983572-4983591 Msa0232730:CDS 45.0%
TCAGGCTGAGAAGAAGTTGA+AGG + chr2_2:4983652-4983671 Msa0232730:CDS 45.0%
GCTGAGAAGAAGTTGAAGGA+AGG + chr2_2:4983656-4983675 Msa0232730:CDS 45.0%
!! AGGAGATGGGATTAGTTTCG+AGG + chr2_2:4983676-4983695 Msa0232730:CDS 45.0%
!! GGAGATGGGATTAGTTTCGA+GGG + chr2_2:4983677-4983696 Msa0232730:CDS 45.0%
AAATGCAACCTCACAGTCTC+AGG - chr2_2:4983725-4983744 None:intergenic 45.0%
! GACTGTGAGGTTGCATTTTG+AGG + chr2_2:4983727-4983746 Msa0232730:CDS 45.0%
!!! GAGGTTGCATTTTGAGGTGT+TGG + chr2_2:4983733-4983752 Msa0232730:CDS 45.0%
!! GAGGTGTTGGCTAAAGTTGA+TGG + chr2_2:4983746-4983765 Msa0232730:CDS 45.0%
TTCACTTGCATGACTCTCTC+AGG - chr2_2:4983785-4983804 None:intergenic 45.0%
! TGTTTGGAGTGGAAGGTTCT+GGG - chr2_2:4981816-4981835 None:intergenic 45.0%
! TTGTTTGGAGTGGAAGGTTC+TGG - chr2_2:4981817-4981836 None:intergenic 45.0%
!! GAAAATGCTTTGGGGTATGG+AGG - chr2_2:4982008-4982027 None:intergenic 45.0%
!! TCGGAAAATGCTTTGGGGTA+TGG - chr2_2:4982011-4982030 None:intergenic 45.0%
! ATTTGATCCTCGAGAAGCAC+AGG + chr2_2:4982091-4982110 Msa0232730:CDS 45.0%
!!! TCCCATTTTTAGGGTTGAGG+AGG + chr2_2:4982214-4982233 Msa0232730:CDS 45.0%
!! TTGGTGGAAAAACGGGTTGA+CGG + chr2_2:4982245-4982264 Msa0232730:CDS 45.0%
!! GAAAAACGGGTTGACGGAAA+TGG + chr2_2:4982251-4982270 Msa0232730:CDS 45.0%
AAGCTGAAACGGAGCCAAAA+CGG - chr2_2:4982282-4982301 None:intergenic 45.0%
TCCTGAACCCAAATCTCCAT+GGG - chr2_2:4982311-4982330 None:intergenic 45.0%
ATCCTGAACCCAAATCTCCA+TGG - chr2_2:4982312-4982331 None:intergenic 45.0%
! GATTTGGGTTCAGGATGCTA+AGG + chr2_2:4982316-4982335 Msa0232730:CDS 45.0%
GGGATATTTATAGCCCTTCG+TGG + chr2_2:4982634-4982653 Msa0232730:intron 45.0%
CTAGAAAACAAGCCCACGAA+GGG - chr2_2:4982650-4982669 None:intergenic 45.0%
ACTAGAAAACAAGCCCACGA+AGG - chr2_2:4982651-4982670 None:intergenic 45.0%
!! CTTTTAGAAGCCTGTTGAGG+CGG + chr2_2:4982725-4982744 Msa0232730:intron 45.0%
! ATGGAACCAGGTGTCACATA+AGG - chr2_2:4982918-4982937 None:intergenic 45.0%
CCGTTAAACCGAACCCAAAA+TGG + chr2_2:4983194-4983213 Msa0232730:CDS 45.0%
!!! CAGCAAAGCCATTTTGGGTT+CGG - chr2_2:4983205-4983224 None:intergenic 45.0%
!! AAGAGGTTGATGCAGAGGAA+GGG - chr2_2:4983328-4983347 None:intergenic 45.0%
!! ATTGGAAGAGGTTGATGCAG+AGG - chr2_2:4983333-4983352 None:intergenic 45.0%
GATCCATTAAGAGAGGCAAG+AGG - chr2_2:4983506-4983525 None:intergenic 45.0%
ATCTTCTGTGTTGGGTCCTA+AGG + chr2_2:4983559-4983578 Msa0232730:CDS 45.0%
GGTCCTAAGGCGAATGAAAA+AGG + chr2_2:4983572-4983591 Msa0232730:CDS 45.0%
TCAGGCTGAGAAGAAGTTGA+AGG + chr2_2:4983652-4983671 Msa0232730:CDS 45.0%
GCTGAGAAGAAGTTGAAGGA+AGG + chr2_2:4983656-4983675 Msa0232730:CDS 45.0%
!! AGGAGATGGGATTAGTTTCG+AGG + chr2_2:4983676-4983695 Msa0232730:CDS 45.0%
!! GGAGATGGGATTAGTTTCGA+GGG + chr2_2:4983677-4983696 Msa0232730:CDS 45.0%
AAATGCAACCTCACAGTCTC+AGG - chr2_2:4983725-4983744 None:intergenic 45.0%
! GACTGTGAGGTTGCATTTTG+AGG + chr2_2:4983727-4983746 Msa0232730:CDS 45.0%
!!! GAGGTTGCATTTTGAGGTGT+TGG + chr2_2:4983733-4983752 Msa0232730:CDS 45.0%
!! GAGGTGTTGGCTAAAGTTGA+TGG + chr2_2:4983746-4983765 Msa0232730:CDS 45.0%
TTCACTTGCATGACTCTCTC+AGG - chr2_2:4983785-4983804 None:intergenic 45.0%
! GTTTGGAGTGGAAGGTTCTG+GGG - chr2_2:4981815-4981834 None:intergenic 50.0%
! AGGATTGGTATCGGAAGCGA+GGG - chr2_2:4981988-4982007 None:intergenic 50.0%
! GGGGTATGGAGGATTGGTAT+CGG - chr2_2:4981997-4982016 None:intergenic 50.0%
!! TGCTTTGGGGTATGGAGGAT+TGG - chr2_2:4982003-4982022 None:intergenic 50.0%
! ATCCTCGAGAAGCACAGGTT+GGG + chr2_2:4982096-4982115 Msa0232730:CDS 50.0%
! AGAAGCACAGGTTGGGCATT+CGG + chr2_2:4982103-4982122 Msa0232730:CDS 50.0%
GGTTGAGGAGGAAAATGGGT+TGG + chr2_2:4982226-4982245 Msa0232730:CDS 50.0%
!! TGAGGAGGAAAATGGGTTGG+TGG + chr2_2:4982229-4982248 Msa0232730:CDS 50.0%
!!! CGGAAATGGGTTACCCGTTT+TGG + chr2_2:4982265-4982284 Msa0232730:CDS 50.0%
AGCTGAAACGGAGCCAAAAC+GGG - chr2_2:4982281-4982300 None:intergenic 50.0%
ATGGGTCCAGCAAGCTGAAA+CGG - chr2_2:4982293-4982312 None:intergenic 50.0%
TTGCTGGACCCATGGAGATT+TGG + chr2_2:4982300-4982319 Msa0232730:CDS 50.0%
TGCTGGACCCATGGAGATTT+GGG + chr2_2:4982301-4982320 Msa0232730:CDS 50.0%
! ACCCATGGAGATTTGGGTTC+AGG + chr2_2:4982307-4982326 Msa0232730:CDS 50.0%
ACTTAAGCCCCAAGCAACCT+GGG + chr2_2:4982672-4982691 Msa0232730:intron 50.0%
TTAAAGGCCCAGGTTGCTTG+GGG - chr2_2:4982682-4982701 None:intergenic 50.0%
CTTAAAGGCCCAGGTTGCTT+GGG - chr2_2:4982683-4982702 None:intergenic 50.0%
ACTTAAAGGCCCAGGTTGCT+TGG - chr2_2:4982684-4982703 None:intergenic 50.0%
AGTTTAGGAGCCCTTCTGGA+GGG + chr2_2:4982769-4982788 Msa0232730:intron 50.0%
ATGCAGCATGATGTGGATGC+TGG + chr2_2:4983077-4983096 Msa0232730:intron 50.0%
TGCAGCATGATGTGGATGCT+GGG + chr2_2:4983078-4983097 Msa0232730:intron 50.0%
!! TGCTGGGGTGTTGAAGAAAG+TGG + chr2_2:4983094-4983113 Msa0232730:CDS 50.0%
GGTGCAGTGGTTACTGTGAA+AGG + chr2_2:4983128-4983147 Msa0232730:CDS 50.0%
! TGGGTTCGGTTTAACGGTAG+AGG - chr2_2:4983191-4983210 None:intergenic 50.0%
! ACCCAAAATGGCTTTGCTGC+CGG + chr2_2:4983206-4983225 Msa0232730:CDS 50.0%
!! GTGAAAGAAGGGGAGCATCT+TGG - chr2_2:4983274-4983293 None:intergenic 50.0%
GAAGGGGCTTCAAGTGAAGA+AGG - chr2_2:4983311-4983330 None:intergenic 50.0%
!! AGAGGTTGATGCAGAGGAAG+GGG - chr2_2:4983327-4983346 None:intergenic 50.0%
!! GAAGAGGTTGATGCAGAGGA+AGG - chr2_2:4983329-4983348 None:intergenic 50.0%
AAGCTTAAGCGTCTTGCACC+TGG + chr2_2:4983362-4983381 Msa0232730:CDS 50.0%
GACGATAACTCCACAAGACC+AGG - chr2_2:4983383-4983402 None:intergenic 50.0%
CTGGAGATCAACGGTAGACA+GGG - chr2_2:4983435-4983454 None:intergenic 50.0%
AGCTTCCTCCTGGAGATCAA+CGG - chr2_2:4983444-4983463 None:intergenic 50.0%
! TGGGTTGGAGTAAGGAGAGT+CGG - chr2_2:4983467-4983486 None:intergenic 50.0%
! CGGTAAACTGGGTTGGAGTA+AGG - chr2_2:4983475-4983494 None:intergenic 50.0%
CACAATGCGGTAAACTGGGT+TGG - chr2_2:4983482-4983501 None:intergenic 50.0%
CAACCCAGTTTACCGCATTG+TGG + chr2_2:4983480-4983499 Msa0232730:CDS 50.0%
AGGCCACAATGCGGTAAACT+GGG - chr2_2:4983486-4983505 None:intergenic 50.0%
TGGCCTCTTGCCTCTCTTAA+TGG + chr2_2:4983500-4983519 Msa0232730:CDS 50.0%
GTTTCGAGGGTTTCCCTGAA+TGG + chr2_2:4983690-4983709 Msa0232730:CDS 50.0%
CAGGCTTAGTCCTCCATTCA+GGG - chr2_2:4983706-4983725 None:intergenic 50.0%
TCAGGCTTAGTCCTCCATTC+AGG - chr2_2:4983707-4983726 None:intergenic 50.0%
! GTTTGGAGTGGAAGGTTCTG+GGG - chr2_2:4981815-4981834 None:intergenic 50.0%
! AGGATTGGTATCGGAAGCGA+GGG - chr2_2:4981988-4982007 None:intergenic 50.0%
! GGGGTATGGAGGATTGGTAT+CGG - chr2_2:4981997-4982016 None:intergenic 50.0%
!! TGCTTTGGGGTATGGAGGAT+TGG - chr2_2:4982003-4982022 None:intergenic 50.0%
! ATCCTCGAGAAGCACAGGTT+GGG + chr2_2:4982096-4982115 Msa0232730:CDS 50.0%
! AGAAGCACAGGTTGGGCATT+CGG + chr2_2:4982103-4982122 Msa0232730:CDS 50.0%
GGTTGAGGAGGAAAATGGGT+TGG + chr2_2:4982226-4982245 Msa0232730:CDS 50.0%
!! TGAGGAGGAAAATGGGTTGG+TGG + chr2_2:4982229-4982248 Msa0232730:CDS 50.0%
!!! CGGAAATGGGTTACCCGTTT+TGG + chr2_2:4982265-4982284 Msa0232730:CDS 50.0%
AGCTGAAACGGAGCCAAAAC+GGG - chr2_2:4982281-4982300 None:intergenic 50.0%
ATGGGTCCAGCAAGCTGAAA+CGG - chr2_2:4982293-4982312 None:intergenic 50.0%
TTGCTGGACCCATGGAGATT+TGG + chr2_2:4982300-4982319 Msa0232730:CDS 50.0%
TGCTGGACCCATGGAGATTT+GGG + chr2_2:4982301-4982320 Msa0232730:CDS 50.0%
! ACCCATGGAGATTTGGGTTC+AGG + chr2_2:4982307-4982326 Msa0232730:CDS 50.0%
ACTTAAGCCCCAAGCAACCT+GGG + chr2_2:4982672-4982691 Msa0232730:intron 50.0%
TTAAAGGCCCAGGTTGCTTG+GGG - chr2_2:4982682-4982701 None:intergenic 50.0%
CTTAAAGGCCCAGGTTGCTT+GGG - chr2_2:4982683-4982702 None:intergenic 50.0%
ACTTAAAGGCCCAGGTTGCT+TGG - chr2_2:4982684-4982703 None:intergenic 50.0%
AGTTTAGGAGCCCTTCTGGA+GGG + chr2_2:4982769-4982788 Msa0232730:intron 50.0%
ATGCAGCATGATGTGGATGC+TGG + chr2_2:4983077-4983096 Msa0232730:intron 50.0%
TGCAGCATGATGTGGATGCT+GGG + chr2_2:4983078-4983097 Msa0232730:intron 50.0%
!! TGCTGGGGTGTTGAAGAAAG+TGG + chr2_2:4983094-4983113 Msa0232730:CDS 50.0%
GGTGCAGTGGTTACTGTGAA+AGG + chr2_2:4983128-4983147 Msa0232730:CDS 50.0%
! TGGGTTCGGTTTAACGGTAG+AGG - chr2_2:4983191-4983210 None:intergenic 50.0%
! ACCCAAAATGGCTTTGCTGC+CGG + chr2_2:4983206-4983225 Msa0232730:CDS 50.0%
!! GTGAAAGAAGGGGAGCATCT+TGG - chr2_2:4983274-4983293 None:intergenic 50.0%
GAAGGGGCTTCAAGTGAAGA+AGG - chr2_2:4983311-4983330 None:intergenic 50.0%
!! AGAGGTTGATGCAGAGGAAG+GGG - chr2_2:4983327-4983346 None:intergenic 50.0%
!! GAAGAGGTTGATGCAGAGGA+AGG - chr2_2:4983329-4983348 None:intergenic 50.0%
AAGCTTAAGCGTCTTGCACC+TGG + chr2_2:4983362-4983381 Msa0232730:CDS 50.0%
GACGATAACTCCACAAGACC+AGG - chr2_2:4983383-4983402 None:intergenic 50.0%
CTGGAGATCAACGGTAGACA+GGG - chr2_2:4983435-4983454 None:intergenic 50.0%
AGCTTCCTCCTGGAGATCAA+CGG - chr2_2:4983444-4983463 None:intergenic 50.0%
! TGGGTTGGAGTAAGGAGAGT+CGG - chr2_2:4983467-4983486 None:intergenic 50.0%
! CGGTAAACTGGGTTGGAGTA+AGG - chr2_2:4983475-4983494 None:intergenic 50.0%
CACAATGCGGTAAACTGGGT+TGG - chr2_2:4983482-4983501 None:intergenic 50.0%
CAACCCAGTTTACCGCATTG+TGG + chr2_2:4983480-4983499 Msa0232730:CDS 50.0%
AGGCCACAATGCGGTAAACT+GGG - chr2_2:4983486-4983505 None:intergenic 50.0%
TGGCCTCTTGCCTCTCTTAA+TGG + chr2_2:4983500-4983519 Msa0232730:CDS 50.0%
GTTTCGAGGGTTTCCCTGAA+TGG + chr2_2:4983690-4983709 Msa0232730:CDS 50.0%
CAGGCTTAGTCCTCCATTCA+GGG - chr2_2:4983706-4983725 None:intergenic 50.0%
TCAGGCTTAGTCCTCCATTC+AGG - chr2_2:4983707-4983726 None:intergenic 50.0%
CGGAAGCGAGGGAGGAATTA+AGG - chr2_2:4981977-4981996 None:intergenic 55.0%
! ATTGGTATCGGAAGCGAGGG+AGG - chr2_2:4981985-4982004 None:intergenic 55.0%
! GAGGATTGGTATCGGAAGCG+AGG - chr2_2:4981989-4982008 None:intergenic 55.0%
! GATCCTCGAGAAGCACAGGT+TGG + chr2_2:4982095-4982114 Msa0232730:CDS 55.0%
TTGGCTCCGTTTCAGCTTGC+TGG + chr2_2:4982284-4982303 Msa0232730:CDS 55.0%
!! GTTTCAGCTTGCTGGACCCA+TGG + chr2_2:4982292-4982311 Msa0232730:CDS 55.0%
GACTTAAGCCCCAAGCAACC+TGG + chr2_2:4982671-4982690 Msa0232730:intron 55.0%
CCAGAAGGGCTCCTAAACTC+AGG - chr2_2:4982768-4982787 None:intergenic 55.0%
CCTGAGTTTAGGAGCCCTTC+TGG + chr2_2:4982765-4982784 Msa0232730:intron 55.0%
GAGTTTAGGAGCCCTTCTGG+AGG + chr2_2:4982768-4982787 Msa0232730:intron 55.0%
AATGCCCTCCAGAGAGGCTT+AGG - chr2_2:4982797-4982816 None:intergenic 55.0%
!! GGAGGGCATTTGTGCCCTTA+AGG + chr2_2:4982807-4982826 Msa0232730:intron 55.0%
GCAGCATGATGTGGATGCTG+GGG + chr2_2:4983079-4983098 Msa0232730:intron 55.0%
!!! GGTTTTGGCTGATGGTGCAG+TGG + chr2_2:4983115-4983134 Msa0232730:CDS 55.0%
!! CCCGGCAGCAAAGCCATTTT+GGG - chr2_2:4983210-4983229 None:intergenic 55.0%
! CCCAAAATGGCTTTGCTGCC+GGG + chr2_2:4983207-4983226 Msa0232730:CDS 55.0%
CTCAGCCAACGTTAGAAGCC+CGG - chr2_2:4983228-4983247 None:intergenic 55.0%
CATCTTGGCCACGAGAAGCA+TGG - chr2_2:4983259-4983278 None:intergenic 55.0%
CCTGGAGATCAACGGTAGAC+AGG - chr2_2:4983436-4983455 None:intergenic 55.0%
CCTGTCTACCGTTGATCTCC+AGG + chr2_2:4983433-4983452 Msa0232730:CDS 55.0%
GTCTACCGTTGATCTCCAGG+AGG + chr2_2:4983436-4983455 Msa0232730:CDS 55.0%
GAGGCCACAATGCGGTAAAC+TGG - chr2_2:4983487-4983506 None:intergenic 55.0%
AGAGGCAAGAGGCCACAATG+CGG - chr2_2:4983495-4983514 None:intergenic 55.0%
TCGAGGGTTTCCCTGAATGG+AGG + chr2_2:4983693-4983712 Msa0232730:CDS 55.0%
GGACTAAGCCTGAGACTGTG+AGG + chr2_2:4983714-4983733 Msa0232730:CDS 55.0%
GCAAGTGAACCCTGTTGTCG+TGG + chr2_2:4983796-4983815 Msa0232730:CDS 55.0%
AGTGAACCCTGTTGTCGTGG+AGG + chr2_2:4983799-4983818 Msa0232730:CDS 55.0%
CACTGTCCTCCACGACAACA+GGG - chr2_2:4983808-4983827 None:intergenic 55.0%
ACACTGTCCTCCACGACAAC+AGG - chr2_2:4983809-4983828 None:intergenic 55.0%
TGTTGTCGTGGAGGACAGTG+TGG + chr2_2:4983808-4983827 Msa0232730:CDS 55.0%
TACAAGGCAAAGGGGATGGG+CGG - chr2_2:4983890-4983909 None:intergenic 55.0%
CGGAAGCGAGGGAGGAATTA+AGG - chr2_2:4981977-4981996 None:intergenic 55.0%
! ATTGGTATCGGAAGCGAGGG+AGG - chr2_2:4981985-4982004 None:intergenic 55.0%
! GAGGATTGGTATCGGAAGCG+AGG - chr2_2:4981989-4982008 None:intergenic 55.0%
! GATCCTCGAGAAGCACAGGT+TGG + chr2_2:4982095-4982114 Msa0232730:CDS 55.0%
TTGGCTCCGTTTCAGCTTGC+TGG + chr2_2:4982284-4982303 Msa0232730:CDS 55.0%
!! GTTTCAGCTTGCTGGACCCA+TGG + chr2_2:4982292-4982311 Msa0232730:CDS 55.0%
GACTTAAGCCCCAAGCAACC+TGG + chr2_2:4982671-4982690 Msa0232730:intron 55.0%
CCAGAAGGGCTCCTAAACTC+AGG - chr2_2:4982768-4982787 None:intergenic 55.0%
CCTGAGTTTAGGAGCCCTTC+TGG + chr2_2:4982765-4982784 Msa0232730:intron 55.0%
GAGTTTAGGAGCCCTTCTGG+AGG + chr2_2:4982768-4982787 Msa0232730:intron 55.0%
AATGCCCTCCAGAGAGGCTT+AGG - chr2_2:4982797-4982816 None:intergenic 55.0%
!! GGAGGGCATTTGTGCCCTTA+AGG + chr2_2:4982807-4982826 Msa0232730:intron 55.0%
GCAGCATGATGTGGATGCTG+GGG + chr2_2:4983079-4983098 Msa0232730:intron 55.0%
!!! GGTTTTGGCTGATGGTGCAG+TGG + chr2_2:4983115-4983134 Msa0232730:CDS 55.0%
!! CCCGGCAGCAAAGCCATTTT+GGG - chr2_2:4983210-4983229 None:intergenic 55.0%
! CCCAAAATGGCTTTGCTGCC+GGG + chr2_2:4983207-4983226 Msa0232730:CDS 55.0%
CTCAGCCAACGTTAGAAGCC+CGG - chr2_2:4983228-4983247 None:intergenic 55.0%
CATCTTGGCCACGAGAAGCA+TGG - chr2_2:4983259-4983278 None:intergenic 55.0%
CCTGGAGATCAACGGTAGAC+AGG - chr2_2:4983436-4983455 None:intergenic 55.0%
CCTGTCTACCGTTGATCTCC+AGG + chr2_2:4983433-4983452 Msa0232730:CDS 55.0%
GTCTACCGTTGATCTCCAGG+AGG + chr2_2:4983436-4983455 Msa0232730:CDS 55.0%
GAGGCCACAATGCGGTAAAC+TGG - chr2_2:4983487-4983506 None:intergenic 55.0%
AGAGGCAAGAGGCCACAATG+CGG - chr2_2:4983495-4983514 None:intergenic 55.0%
TCGAGGGTTTCCCTGAATGG+AGG + chr2_2:4983693-4983712 Msa0232730:CDS 55.0%
GGACTAAGCCTGAGACTGTG+AGG + chr2_2:4983714-4983733 Msa0232730:CDS 55.0%
GCAAGTGAACCCTGTTGTCG+TGG + chr2_2:4983796-4983815 Msa0232730:CDS 55.0%
AGTGAACCCTGTTGTCGTGG+AGG + chr2_2:4983799-4983818 Msa0232730:CDS 55.0%
CACTGTCCTCCACGACAACA+GGG - chr2_2:4983808-4983827 None:intergenic 55.0%
ACACTGTCCTCCACGACAAC+AGG - chr2_2:4983809-4983828 None:intergenic 55.0%
TGTTGTCGTGGAGGACAGTG+TGG + chr2_2:4983808-4983827 Msa0232730:CDS 55.0%
TACAAGGCAAAGGGGATGGG+CGG - chr2_2:4983890-4983909 None:intergenic 55.0%
TGCCCAACCTGTGCTTCTCG+AGG - chr2_2:4982101-4982120 None:intergenic 60.0%
GGCACAAATGCCCTCCAGAG+AGG - chr2_2:4982803-4982822 None:intergenic 60.0%
! GCCCGGCAGCAAAGCCATTT+TGG - chr2_2:4983211-4983230 None:intergenic 60.0%
TGCTGCCGGGCTTCTAACGT+TGG + chr2_2:4983220-4983239 Msa0232730:CDS 60.0%
CATCTCCGCCATGCTTCTCG+TGG + chr2_2:4983248-4983267 Msa0232730:CDS 60.0%
! CTTGGCCACGAGAAGCATGG+CGG - chr2_2:4983256-4983275 None:intergenic 60.0%
!! GCGTCTTGCACCTGGTCTTG+TGG + chr2_2:4983370-4983389 Msa0232730:CDS 60.0%
TGCCCAACCTGTGCTTCTCG+AGG - chr2_2:4982101-4982120 None:intergenic 60.0%
GGCACAAATGCCCTCCAGAG+AGG - chr2_2:4982803-4982822 None:intergenic 60.0%
! GCCCGGCAGCAAAGCCATTT+TGG - chr2_2:4983211-4983230 None:intergenic 60.0%
TGCTGCCGGGCTTCTAACGT+TGG + chr2_2:4983220-4983239 Msa0232730:CDS 60.0%
CATCTCCGCCATGCTTCTCG+TGG + chr2_2:4983248-4983267 Msa0232730:CDS 60.0%
! CTTGGCCACGAGAAGCATGG+CGG - chr2_2:4983256-4983275 None:intergenic 60.0%
!! GCGTCTTGCACCTGGTCTTG+TGG + chr2_2:4983370-4983389 Msa0232730:CDS 60.0%
AACTCAGGCGCGTCCCCCAA+GGG - chr2_2:4982753-4982772 None:intergenic 65.0%
AAACTCAGGCGCGTCCCCCA+AGG - chr2_2:4982754-4982773 None:intergenic 65.0%
TGGGGGACGCGCCTGAGTTT+AGG + chr2_2:4982754-4982773 Msa0232730:intron 65.0%
GGCTTAGGCGCCCTCCAGAA+GGG - chr2_2:4982782-4982801 None:intergenic 65.0%
AGGCTTAGGCGCCCTCCAGA+AGG - chr2_2:4982783-4982802 None:intergenic 65.0%
GGCGCCTAAGCCTCTCTGGA+GGG + chr2_2:4982790-4982809 Msa0232730:intron 65.0%
GGAGAGTCGGAGCTTCCTCC+TGG - chr2_2:4983454-4983473 None:intergenic 65.0%
ATGGGCGGAGGCTGAACGAG+TGG - chr2_2:4983875-4983894 None:intergenic 65.0%
AAGGCAAAGGGGATGGGCGG+AGG - chr2_2:4983887-4983906 None:intergenic 65.0%
AACTCAGGCGCGTCCCCCAA+GGG - chr2_2:4982753-4982772 None:intergenic 65.0%
AAACTCAGGCGCGTCCCCCA+AGG - chr2_2:4982754-4982773 None:intergenic 65.0%
TGGGGGACGCGCCTGAGTTT+AGG + chr2_2:4982754-4982773 Msa0232730:intron 65.0%
GGCTTAGGCGCCCTCCAGAA+GGG - chr2_2:4982782-4982801 None:intergenic 65.0%
AGGCTTAGGCGCCCTCCAGA+AGG - chr2_2:4982783-4982802 None:intergenic 65.0%
GGCGCCTAAGCCTCTCTGGA+GGG + chr2_2:4982790-4982809 Msa0232730:intron 65.0%
GGAGAGTCGGAGCTTCCTCC+TGG - chr2_2:4983454-4983473 None:intergenic 65.0%
ATGGGCGGAGGCTGAACGAG+TGG - chr2_2:4983875-4983894 None:intergenic 65.0%
AAGGCAAAGGGGATGGGCGG+AGG - chr2_2:4983887-4983906 None:intergenic 65.0%
CCTGTTGAGGCGGCGCCCTT+GGG + chr2_2:4982735-4982754 Msa0232730:intron 70.0%
CTGTTGAGGCGGCGCCCTTG+GGG + chr2_2:4982736-4982755 Msa0232730:intron 70.0%
TGTTGAGGCGGCGCCCTTGG+GGG + chr2_2:4982737-4982756 Msa0232730:intron 70.0%
!! GGAGGGCGCCTAAGCCTCTC+TGG + chr2_2:4982786-4982805 Msa0232730:intron 70.0%
GGGCGCCTAAGCCTCTCTGG+AGG + chr2_2:4982789-4982808 Msa0232730:intron 70.0%
CCTGTTGAGGCGGCGCCCTT+GGG + chr2_2:4982735-4982754 Msa0232730:intron 70.0%
CTGTTGAGGCGGCGCCCTTG+GGG + chr2_2:4982736-4982755 Msa0232730:intron 70.0%
TGTTGAGGCGGCGCCCTTGG+GGG + chr2_2:4982737-4982756 Msa0232730:intron 70.0%
!! GGAGGGCGCCTAAGCCTCTC+TGG + chr2_2:4982786-4982805 Msa0232730:intron 70.0%
GGGCGCCTAAGCCTCTCTGG+AGG + chr2_2:4982789-4982808 Msa0232730:intron 70.0%
GCCTGTTGAGGCGGCGCCCT+TGG + chr2_2:4982734-4982753 Msa0232730:intron 75.0%
!! CCCAAGGGCGCCGCCTCAAC+AGG - chr2_2:4982738-4982757 None:intergenic 75.0%
GCCTGTTGAGGCGGCGCCCT+TGG + chr2_2:4982734-4982753 Msa0232730:intron 75.0%
!! CCCAAGGGCGCCGCCTCAAC+AGG - chr2_2:4982738-4982757 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 4981805 4984221 4981805 ID=Msa0232730;Name=Msa0232730
chr2_2 mRNA 4981805 4984221 4981805 ID=Msa0232730-mRNA-1;Parent=Msa0232730;Name=Msa0232730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=134|1|1|1|1|1|2|311|415
chr2_2 exon 4981805 4982358 4981805 ID=Msa0232730-mRNA-1:exon:2117;Parent=Msa0232730-mRNA-1
chr2_2 exon 4983083 4984221 4983083 ID=Msa0232730-mRNA-1:exon:2118;Parent=Msa0232730-mRNA-1
chr2_2 five_prime_UTR 4981805 4981938 4981805 ID=Msa0232730-mRNA-1:five_prime_utr;Parent=Msa0232730-mRNA-1
chr2_2 CDS 4981939 4982358 4981939 ID=Msa0232730-mRNA-1:cds;Parent=Msa0232730-mRNA-1
chr2_2 CDS 4983083 4983910 4983083 ID=Msa0232730-mRNA-1:cds;Parent=Msa0232730-mRNA-1
chr2_2 three_prime_UTR 4983911 4984221 4983911 ID=Msa0232730-mRNA-1:three_prime_utr;Parent=Msa0232730-mRNA-1
Gene Sequence

>Msa0232730

ATGAAATCGCTTATTTTCGGAATCGCTTTTCTTCTCCTTAATTCCTCCCTCGCTTCCGATACCAATCCTCCATACCCCAAAGCATTTTCCGATTTTAAGGAATCAATTGTGAAAGGATTAGGGTTTAACGCAGATGATTTCAAGGTTACGGGATTTGATCCTCGAGAAGCACAGGTTGGGCATTCGGTAGAATATCAATTCGACGTTGAAATTGATGATAAAGTTGTTCCATTTAAGCTTCTTGAAGATACGAAACGTTGGGATTATGTTGATCTTCCCATTTTTAGGGTTGAGGAGGAAAATGGGTTGGTGGAAAAACGGGTTGACGGAAATGGGTTACCCGTTTTGGCTCCGTTTCAGCTTGCTGGACCCATGGAGATTTGGGTTCAGGATGCTAAGGATATGAGACTCTCTCTCCCTCATGATGTGGATGCTGGGGTGTTGAAGAAAGTGGTTTTGGCTGATGGTGCAGTGGTTACTGTGAAAGGTGCAAGATCAGTGAGTCTTCGCCATCCTCTTACTTTACCTCTACCGTTAAACCGAACCCAAAATGGCTTTGCTGCCGGGCTTCTAACGTTGGCTGAGCATCTCCGCCATGCTTCTCGTGGCCAAGATGCTCCCCTTCTTTCACTTCGTATTGTTGGTCCTTCTTCACTTGAAGCCCCTTCCTCTGCATCAACCTCTTCCAATAACAGGTTGAAGCTTAAGCGTCTTGCACCTGGTCTTGTGGAGTTATCGTCTCAATCAAAAGCCAAATTAGTTGACACTTCCCTGTCTACCGTTGATCTCCAGGAGGAAGCTCCGACTCTCCTTACTCCAACCCAGTTTACCGCATTGTGGCCTCTTGCCTCTCTTAATGGATCAAATGCAAACTTGTTGGGTTTTGAGAGATTGTTATCTTCTGTGTTGGGTCCTAAGGCGAATGAAAAAGGTTCCTTCAGGTTGTTGAAAGCTGATGTTTCTGCTCAGACTTTTGTCAAGATAGGCTTTCAGGCTGAGAAGAAGTTGAAGGAAGGAGATGGGATTAGTTTCGAGGGTTTCCCTGAATGGAGGACTAAGCCTGAGACTGTGAGGTTGCATTTTGAGGTGTTGGCTAAAGTTGATGGTGATAAAGTCATACCTGAGAGAGTCATGCAAGTGAACCCTGTTGTCGTGGAGGACAGTGTGGCGCCAAATATGCTGACTAAAAATGGGACAATGTCAAAGATGCCACTCGTTCAGCCTCCGCCCATCCCCTTTGCCTTGTAA
Protein sequence

>Msa0232730

MKSLIFGIAFLLLNSSLASDTNPPYPKAFSDFKESIVKGLGFNADDFKVTGFDPREAQVGHSVEYQFDVEIDDKVVPFKLLEDTKRWDYVDLPIFRVEEENGLVEKRVDGNGLPVLAPFQLAGPMEIWVQDAKDMRLSLPHDVDAGVLKKVVLADGAVVTVKGARSVSLRHPLTLPLPLNRTQNGFAAGLLTLAEHLRHASRGQDAPLLSLRIVGPSSLEAPSSASTSSNNRLKLKRLAPGLVELSSQSKAKLVDTSLSTVDLQEEAPTLLTPTQFTALWPLASLNGSNANLLGFERLLSSVLGPKANEKGSFRLLKADVSAQTFVKIGFQAEKKLKEGDGISFEGFPEWRTKPETVRLHFEVLAKVDGDKVIPERVMQVNPVVVEDSVAPNMLTKNGTMSKMPLVQPPPIPFAL*