Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343140 | XP_003593345.1 | 98.020 | 303 | 6 | 0 | 1 | 303 | 113 | 415 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343140 | G7IFB8 | 98.020 | 303 | 6 | 0 | 1 | 303 | 113 | 415 | 0.0 | 592 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0232730 | Msa1343140 | 0.964464 | 2.323626e-123 | -8.615850e-47 |
| Msa1343140 | Msa1346120 | 0.806248 | 9.021839e-50 | -8.615850e-47 |
| Msa0367140 | Msa1343140 | 0.801775 | 7.678129e-49 | -8.615850e-47 |
| Msa0459730 | Msa1343140 | 0.816508 | 5.332726e-52 | -8.615850e-47 |
| Msa0249690 | Msa1343140 | -0.807636 | 4.588642e-50 | -8.615850e-47 |
| Msa0506530 | Msa1343140 | 0.831684 | 1.452135e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343140 | MtrunA17_Chr2g0280181 | 98.020 | 303 | 6 | 0 | 1 | 303 | 113 | 415 | 0.0 | 592 |
| Msa1343140 | MtrunA17_Chr4g0076531 | 86.831 | 243 | 27 | 3 | 63 | 300 | 5 | 247 | 5.96e-143 | 402 |
| Msa1343140 | MtrunA17_Chr1g0154021 | 26.645 | 304 | 179 | 8 | 1 | 297 | 125 | 391 | 3.78e-22 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1343140 | AT5G64510.1 | 68.852 | 305 | 83 | 5 | 1 | 303 | 130 | 424 | 3.43e-144 | 412 |
Find 87 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCCTCTTGCCTCTCTTAA+TGG | 0.159460 | tig0006327:+1229 | Msa1343140:CDS |
| GCCCGGCAGCAAAGCCATTT+TGG | 0.159921 | tig0006327:-937 | None:intergenic |
| CTTAAGCTTCAACCTGTTAT+TGG | 0.177318 | tig0006327:-1077 | None:intergenic |
| CAGGGAAGTGTCAACTAATT+TGG | 0.230917 | tig0006327:-1143 | None:intergenic |
| TCAGGCTTAGTCCTCCATTC+AGG | 0.281632 | tig0006327:-1433 | None:intergenic |
| CCGTTAAACCGAACCCAAAA+TGG | 0.291806 | tig0006327:+923 | Msa1343140:CDS |
| GAGGCCACAATGCGGTAAAC+TGG | 0.300211 | tig0006327:-1213 | None:intergenic |
| CTTCTTTCACTTCGTATTGT+TGG | 0.308122 | tig0006327:+1013 | Msa1343140:CDS |
| CCCAAAATGGCTTTGCTGCC+GGG | 0.335455 | tig0006327:+936 | Msa1343140:CDS |
| ACACTGTCCTCCACGACAAC+AGG | 0.360274 | tig0006327:-1535 | None:intergenic |
| GGTCCTAAGGCGAATGAAAA+AGG | 0.383211 | tig0006327:+1301 | Msa1343140:CDS |
| TGGATCAAATGCAAACTTGT+TGG | 0.387082 | tig0006327:+1249 | Msa1343140:CDS |
| ACCCAAAATGGCTTTGCTGC+CGG | 0.390746 | tig0006327:+935 | Msa1343140:CDS |
| AGAAGTTGAAGGAAGGAGAT+GGG | 0.402959 | tig0006327:+1392 | Msa1343140:CDS |
| GGATCAAATGCAAACTTGTT+GGG | 0.402992 | tig0006327:+1250 | Msa1343140:CDS |
| CATCAACCTCTTCCAATAAC+AGG | 0.407635 | tig0006327:+1065 | Msa1343140:CDS |
| GGTGTTGAAGAAAGTGGTTT+TGG | 0.408885 | tig0006327:+829 | Msa1343140:CDS |
| GTTTCGAGGGTTTCCCTGAA+TGG | 0.410584 | tig0006327:+1419 | Msa1343140:CDS |
| ATCTTCTGTGTTGGGTCCTA+AGG | 0.411358 | tig0006327:+1288 | Msa1343140:CDS |
| CCTGTCTACCGTTGATCTCC+AGG | 0.426754 | tig0006327:+1162 | Msa1343140:CDS |
| AAATGCAACCTCACAGTCTC+AGG | 0.426902 | tig0006327:-1451 | None:intergenic |
| GAGGTGTTGGCTAAAGTTGA+TGG | 0.432179 | tig0006327:+1475 | Msa1343140:CDS |
| GGAGAGTCGGAGCTTCCTCC+TGG | 0.433575 | tig0006327:-1180 | None:intergenic |
| TGCTGCCGGGCTTCTAACGT+TGG | 0.434900 | tig0006327:+949 | Msa1343140:CDS |
| CTTCAACCTGTTATTGGAAG+AGG | 0.446577 | tig0006327:-1071 | None:intergenic |
| AAGGCAAAGGGGATGGGCGG+AGG | 0.452573 | tig0006327:-1613 | None:intergenic |
| AGGAGATGGGATTAGTTTCG+AGG | 0.452803 | tig0006327:+1405 | Msa1343140:CDS |
| CGGTAAACTGGGTTGGAGTA+AGG | 0.454457 | tig0006327:-1201 | None:intergenic |
| AGATTGTTATCTTCTGTGTT+GGG | 0.455474 | tig0006327:+1280 | Msa1343140:CDS |
| CCACTAATTTACAAGGCAAA+GGG | 0.456427 | tig0006327:-1625 | None:intergenic |
| CCTGGAGATCAACGGTAGAC+AGG | 0.458620 | tig0006327:-1162 | None:intergenic |
| ATGCAGCATGATGTGGATGC+TGG | 0.463221 | tig0006327:+806 | Msa1343140:intron |
| GAGATTGTTATCTTCTGTGT+TGG | 0.464749 | tig0006327:+1279 | Msa1343140:CDS |
| AAGAAGTTGAAGGAAGGAGA+TGG | 0.470396 | tig0006327:+1391 | Msa1343140:CDS |
| TTCACTTGCATGACTCTCTC+AGG | 0.485508 | tig0006327:-1511 | None:intergenic |
| AACGGTAGAGGTAAAGTAAG+AGG | 0.487215 | tig0006327:-905 | None:intergenic |
| TGGGTTCGGTTTAACGGTAG+AGG | 0.500912 | tig0006327:-917 | None:intergenic |
| TCAGGCTGAGAAGAAGTTGA+AGG | 0.503184 | tig0006327:+1381 | Msa1343140:CDS |
| GTGAAAGAAGGGGAGCATCT+TGG | 0.503890 | tig0006327:-1000 | None:intergenic |
| ACCCTTGCCACTAATTTACA+AGG | 0.504723 | tig0006327:-1632 | None:intergenic |
| CAGGCTTAGTCCTCCATTCA+GGG | 0.505236 | tig0006327:-1432 | None:intergenic |
| GCGTCTTGCACCTGGTCTTG+TGG | 0.507182 | tig0006327:+1099 | Msa1343140:CDS |
| CTCAGCCAACGTTAGAAGCC+CGG | 0.510275 | tig0006327:-954 | None:intergenic |
| GCCACTAATTTACAAGGCAA+AGG | 0.510330 | tig0006327:-1626 | None:intergenic |
| GAAGGGGCTTCAAGTGAAGA+AGG | 0.512247 | tig0006327:-1037 | None:intergenic |
| AATTTACAAGGCAAAGGGGA+TGG | 0.512989 | tig0006327:-1620 | None:intergenic |
| AAGCTTAAGCGTCTTGCACC+TGG | 0.516176 | tig0006327:+1091 | Msa1343140:CDS |
| ATTTACAAGGCAAAGGGGAT+GGG | 0.517607 | tig0006327:-1619 | None:intergenic |
| CAACAATACGAAGTGAAAGA+AGG | 0.520908 | tig0006327:-1012 | None:intergenic |
| TGCTGGGGTGTTGAAGAAAG+TGG | 0.527473 | tig0006327:+823 | Msa1343140:CDS |
| AGAGGTTGATGCAGAGGAAG+GGG | 0.530015 | tig0006327:-1053 | None:intergenic |
| ATTGGAAGAGGTTGATGCAG+AGG | 0.530587 | tig0006327:-1059 | None:intergenic |
| TGCAGCATGATGTGGATGCT+GGG | 0.532335 | tig0006327:+807 | Msa1343140:intron |
| ATGGGCGGAGGCTGAACGAG+TGG | 0.546452 | tig0006327:-1601 | None:intergenic |
| AACAATACGAAGTGAAAGAA+GGG | 0.549371 | tig0006327:-1011 | None:intergenic |
| GACGATAACTCCACAAGACC+AGG | 0.550266 | tig0006327:-1109 | None:intergenic |
| GGAGATGGGATTAGTTTCGA+GGG | 0.550774 | tig0006327:+1406 | Msa1343140:CDS |
| GAAGAGGTTGATGCAGAGGA+AGG | 0.553179 | tig0006327:-1055 | None:intergenic |
| AGGCCACAATGCGGTAAACT+GGG | 0.554600 | tig0006327:-1212 | None:intergenic |
| TGCATTTGATCCATTAAGAG+AGG | 0.563952 | tig0006327:-1239 | None:intergenic |
| CATCTCCGCCATGCTTCTCG+TGG | 0.574647 | tig0006327:+977 | Msa1343140:CDS |
| CTGGAGATCAACGGTAGACA+GGG | 0.576437 | tig0006327:-1161 | None:intergenic |
| CATCTTGGCCACGAGAAGCA+TGG | 0.581167 | tig0006327:-985 | None:intergenic |
| AAGAGGTTGATGCAGAGGAA+GGG | 0.582205 | tig0006327:-1054 | None:intergenic |
| CACAATGCGGTAAACTGGGT+TGG | 0.588789 | tig0006327:-1208 | None:intergenic |
| TCGAGGGTTTCCCTGAATGG+AGG | 0.592424 | tig0006327:+1422 | Msa1343140:CDS |
| TGGGTTGGAGTAAGGAGAGT+CGG | 0.596767 | tig0006327:-1193 | None:intergenic |
| GGTGCAGTGGTTACTGTGAA+AGG | 0.598016 | tig0006327:+857 | Msa1343140:CDS |
| TACAAGGCAAAGGGGATGGG+CGG | 0.605840 | tig0006327:-1616 | None:intergenic |
| GCTGAGAAGAAGTTGAAGGA+AGG | 0.608223 | tig0006327:+1385 | Msa1343140:CDS |
| TTGGTATATGCAGCATGATG+TGG | 0.609482 | tig0006327:+799 | Msa1343140:intron |
| AGCTTCCTCCTGGAGATCAA+CGG | 0.614054 | tig0006327:-1170 | None:intergenic |
| GCAAGTGAACCCTGTTGTCG+TGG | 0.619738 | tig0006327:+1525 | Msa1343140:CDS |
| CAACCCAGTTTACCGCATTG+TGG | 0.622372 | tig0006327:+1209 | Msa1343140:CDS |
| CACTAATTTACAAGGCAAAG+GGG | 0.632588 | tig0006327:-1624 | None:intergenic |
| GTAGAGGTAAAGTAAGAGGA+TGG | 0.641794 | tig0006327:-901 | None:intergenic |
| ATCAGCTTTCAACAACCTGA+AGG | 0.665803 | tig0006327:-1326 | None:intergenic |
| GCAGCATGATGTGGATGCTG+GGG | 0.665872 | tig0006327:+808 | Msa1343140:intron |
| CACTGTCCTCCACGACAACA+GGG | 0.668924 | tig0006327:-1534 | None:intergenic |
| TGTTGTCGTGGAGGACAGTG+TGG | 0.679306 | tig0006327:+1537 | Msa1343140:CDS |
| ACAATACGAAGTGAAAGAAG+GGG | 0.685811 | tig0006327:-1010 | None:intergenic |
| GATCCATTAAGAGAGGCAAG+AGG | 0.685845 | tig0006327:-1232 | None:intergenic |
| GGACTAAGCCTGAGACTGTG+AGG | 0.704209 | tig0006327:+1443 | Msa1343140:CDS |
| AGTGAACCCTGTTGTCGTGG+AGG | 0.705653 | tig0006327:+1528 | Msa1343140:CDS |
| CTTGGCCACGAGAAGCATGG+CGG | 0.706435 | tig0006327:-982 | None:intergenic |
| GTCTACCGTTGATCTCCAGG+AGG | 0.718401 | tig0006327:+1165 | Msa1343140:CDS |
| AGAGGCAAGAGGCCACAATG+CGG | 0.786297 | tig0006327:-1221 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAATAGATATTATGATTA+TGG | - | tig0006327:575-594 | None:intergenic | 15.0% |
| !! | AAATTCCAATCATATATTTA+GGG | - | tig0006327:671-690 | None:intergenic | 15.0% |
| !! | TAAATTCCAATCATATATTT+AGG | - | tig0006327:672-691 | None:intergenic | 15.0% |
| !! | CATAATAGATATTATGATTA+TGG | - | tig0006327:575-594 | None:intergenic | 15.0% |
| !! | AAATTCCAATCATATATTTA+GGG | - | tig0006327:671-690 | None:intergenic | 15.0% |
| !! | TAAATTCCAATCATATATTT+AGG | - | tig0006327:672-691 | None:intergenic | 15.0% |
| !!! | AATTTTAATTGCACACATTA+TGG | + | tig0006327:227-246 | Msa1343140:intron | 20.0% |
| !!! | TTTTCAAATCATCACATAAA+CGG | - | tig0006327:332-351 | None:intergenic | 20.0% |
| !! | ATCACTATAAAATGACTTAA+AGG | - | tig0006327:427-446 | None:intergenic | 20.0% |
| !! | GTTTACAAAAGTAAATGATT+TGG | + | tig0006327:594-613 | Msa1343140:intron | 20.0% |
| !!! | AATTTTAATTGCACACATTA+TGG | + | tig0006327:227-246 | Msa1343140:intron | 20.0% |
| !!! | TTTTCAAATCATCACATAAA+CGG | - | tig0006327:332-351 | None:intergenic | 20.0% |
| !! | ATCACTATAAAATGACTTAA+AGG | - | tig0006327:427-446 | None:intergenic | 20.0% |
| !! | GTTTACAAAAGTAAATGATT+TGG | + | tig0006327:594-613 | Msa1343140:intron | 20.0% |
| ! | TGAGTACAATATTAGAAACT+AGG | + | tig0006327:300-319 | Msa1343140:intron | 25.0% |
| ! | TGTGAAATTATGAAGATTGA+AGG | + | tig0006327:709-728 | Msa1343140:intron | 25.0% |
| ! | GTGAAATTATGAAGATTGAA+GGG | + | tig0006327:710-729 | Msa1343140:intron | 25.0% |
| !! | AAAATGACTTGATGTTGATT+TGG | + | tig0006327:780-799 | Msa1343140:intron | 25.0% |
| !! | CAAATATGCTGACTAAAAAT+GGG | + | tig0006327:1563-1582 | Msa1343140:CDS | 25.0% |
| ! | TGAGTACAATATTAGAAACT+AGG | + | tig0006327:300-319 | Msa1343140:intron | 25.0% |
| ! | TGTGAAATTATGAAGATTGA+AGG | + | tig0006327:709-728 | Msa1343140:intron | 25.0% |
| ! | GTGAAATTATGAAGATTGAA+GGG | + | tig0006327:710-729 | Msa1343140:intron | 25.0% |
| !! | AAAATGACTTGATGTTGATT+TGG | + | tig0006327:780-799 | Msa1343140:intron | 25.0% |
| !! | CAAATATGCTGACTAAAAAT+GGG | + | tig0006327:1563-1582 | Msa1343140:CDS | 25.0% |
| !! | ATTAGAGAAAAGCACTTACA+GGG | - | tig0006327:87-106 | None:intergenic | 30.0% |
| TTGCACACATTATGGTTATT+TGG | + | tig0006327:235-254 | Msa1343140:intron | 30.0% | |
| GTTATTTGGAGGATTAATCT+AGG | + | tig0006327:249-268 | Msa1343140:intron | 30.0% | |
| CCAATCATATATTTAGGGAA+TGG | - | tig0006327:666-685 | None:intergenic | 30.0% | |
| CCATTCCCTAAATATATGAT+TGG | + | tig0006327:663-682 | Msa1343140:intron | 30.0% | |
| GTGTAGTTTATAGAGTAAGA+TGG | + | tig0006327:734-753 | Msa1343140:intron | 30.0% | |
| AACAATACGAAGTGAAAGAA+GGG | - | tig0006327:1014-1033 | None:intergenic | 30.0% | |
| AGATTGTTATCTTCTGTGTT+GGG | + | tig0006327:1280-1299 | Msa1343140:CDS | 30.0% | |
| !!! | CCATTTTTAGTCAGCATATT+TGG | - | tig0006327:1565-1584 | None:intergenic | 30.0% |
| ! | CCAAATATGCTGACTAAAAA+TGG | + | tig0006327:1562-1581 | Msa1343140:CDS | 30.0% |
| !! | ATTAGAGAAAAGCACTTACA+GGG | - | tig0006327:87-106 | None:intergenic | 30.0% |
| TTGCACACATTATGGTTATT+TGG | + | tig0006327:235-254 | Msa1343140:intron | 30.0% | |
| GTTATTTGGAGGATTAATCT+AGG | + | tig0006327:249-268 | Msa1343140:intron | 30.0% | |
| CCAATCATATATTTAGGGAA+TGG | - | tig0006327:666-685 | None:intergenic | 30.0% | |
| CCATTCCCTAAATATATGAT+TGG | + | tig0006327:663-682 | Msa1343140:intron | 30.0% | |
| GTGTAGTTTATAGAGTAAGA+TGG | + | tig0006327:734-753 | Msa1343140:intron | 30.0% | |
| AACAATACGAAGTGAAAGAA+GGG | - | tig0006327:1014-1033 | None:intergenic | 30.0% | |
| AGATTGTTATCTTCTGTGTT+GGG | + | tig0006327:1280-1299 | Msa1343140:CDS | 30.0% | |
| !!! | CCATTTTTAGTCAGCATATT+TGG | - | tig0006327:1565-1584 | None:intergenic | 30.0% |
| ! | CCAAATATGCTGACTAAAAA+TGG | + | tig0006327:1562-1581 | Msa1343140:CDS | 30.0% |
| !! | GATTAGAGAAAAGCACTTAC+AGG | - | tig0006327:88-107 | None:intergenic | 35.0% |
| CACACATTATGGTTATTTGG+AGG | + | tig0006327:238-257 | Msa1343140:intron | 35.0% | |
| ATTTGGAGGATTAATCTAGG+TGG | + | tig0006327:252-271 | Msa1343140:intron | 35.0% | |
| ATTTGAAAATGCCCTCAAGA+GGG | + | tig0006327:343-362 | Msa1343140:intron | 35.0% | |
| GCTATAAATATCCCTCTTGA+GGG | - | tig0006327:357-376 | None:intergenic | 35.0% | |
| ATAAAATGACTTAAAGGCCC+AGG | - | tig0006327:421-440 | None:intergenic | 35.0% | |
| !! | ATACTTTTAGAAGCCTGTTG+AGG | + | tig0006327:451-470 | Msa1343140:intron | 35.0% |
| TTGTGCCCTTAAGGATATAT+TGG | + | tig0006327:545-564 | Msa1343140:intron | 35.0% | |
| GACTGCCAATATATCCTTAA+GGG | - | tig0006327:553-572 | None:intergenic | 35.0% | |
| ATATTACCTTATGTGACACC+TGG | + | tig0006327:638-657 | Msa1343140:intron | 35.0% | |
| TATATTTAGGGAATGGAACC+AGG | - | tig0006327:659-678 | None:intergenic | 35.0% | |
| TAAGATGGTGTAGTTGAATG+TGG | + | tig0006327:749-768 | Msa1343140:intron | 35.0% | |
| ACAATACGAAGTGAAAGAAG+GGG | - | tig0006327:1013-1032 | None:intergenic | 35.0% | |
| CAACAATACGAAGTGAAAGA+AGG | - | tig0006327:1015-1034 | None:intergenic | 35.0% | |
| CTTCTTTCACTTCGTATTGT+TGG | + | tig0006327:1013-1032 | Msa1343140:CDS | 35.0% | |
| CTTAAGCTTCAACCTGTTAT+TGG | - | tig0006327:1080-1099 | None:intergenic | 35.0% | |
| TGCATTTGATCCATTAAGAG+AGG | - | tig0006327:1242-1261 | None:intergenic | 35.0% | |
| TGGATCAAATGCAAACTTGT+TGG | + | tig0006327:1249-1268 | Msa1343140:CDS | 35.0% | |
| ! | GGATCAAATGCAAACTTGTT+GGG | + | tig0006327:1250-1269 | Msa1343140:CDS | 35.0% |
| GAGATTGTTATCTTCTGTGT+TGG | + | tig0006327:1279-1298 | Msa1343140:CDS | 35.0% | |
| ! | TTTTGTCAAGATAGGCTTTC+AGG | + | tig0006327:1363-1382 | Msa1343140:CDS | 35.0% |
| !! | GATTAGAGAAAAGCACTTAC+AGG | - | tig0006327:88-107 | None:intergenic | 35.0% |
| CACACATTATGGTTATTTGG+AGG | + | tig0006327:238-257 | Msa1343140:intron | 35.0% | |
| ATTTGGAGGATTAATCTAGG+TGG | + | tig0006327:252-271 | Msa1343140:intron | 35.0% | |
| ATTTGAAAATGCCCTCAAGA+GGG | + | tig0006327:343-362 | Msa1343140:intron | 35.0% | |
| GCTATAAATATCCCTCTTGA+GGG | - | tig0006327:357-376 | None:intergenic | 35.0% | |
| ATAAAATGACTTAAAGGCCC+AGG | - | tig0006327:421-440 | None:intergenic | 35.0% | |
| !! | ATACTTTTAGAAGCCTGTTG+AGG | + | tig0006327:451-470 | Msa1343140:intron | 35.0% |
| TTGTGCCCTTAAGGATATAT+TGG | + | tig0006327:545-564 | Msa1343140:intron | 35.0% | |
| GACTGCCAATATATCCTTAA+GGG | - | tig0006327:553-572 | None:intergenic | 35.0% | |
| ATATTACCTTATGTGACACC+TGG | + | tig0006327:638-657 | Msa1343140:intron | 35.0% | |
| TATATTTAGGGAATGGAACC+AGG | - | tig0006327:659-678 | None:intergenic | 35.0% | |
| TAAGATGGTGTAGTTGAATG+TGG | + | tig0006327:749-768 | Msa1343140:intron | 35.0% | |
| ACAATACGAAGTGAAAGAAG+GGG | - | tig0006327:1013-1032 | None:intergenic | 35.0% | |
| CAACAATACGAAGTGAAAGA+AGG | - | tig0006327:1015-1034 | None:intergenic | 35.0% | |
| CTTCTTTCACTTCGTATTGT+TGG | + | tig0006327:1013-1032 | Msa1343140:CDS | 35.0% | |
| CTTAAGCTTCAACCTGTTAT+TGG | - | tig0006327:1080-1099 | None:intergenic | 35.0% | |
| TGCATTTGATCCATTAAGAG+AGG | - | tig0006327:1242-1261 | None:intergenic | 35.0% | |
| TGGATCAAATGCAAACTTGT+TGG | + | tig0006327:1249-1268 | Msa1343140:CDS | 35.0% | |
| ! | GGATCAAATGCAAACTTGTT+GGG | + | tig0006327:1250-1269 | Msa1343140:CDS | 35.0% |
| GAGATTGTTATCTTCTGTGT+TGG | + | tig0006327:1279-1298 | Msa1343140:CDS | 35.0% | |
| ! | TTTTGTCAAGATAGGCTTTC+AGG | + | tig0006327:1363-1382 | Msa1343140:CDS | 35.0% |
| GATTTGAAAATGCCCTCAAG+AGG | + | tig0006327:342-361 | Msa1343140:intron | 40.0% | |
| GGCTATAAATATCCCTCTTG+AGG | - | tig0006327:358-377 | None:intergenic | 40.0% | |
| GGATATTTATAGCCCTTCGT+GGG | + | tig0006327:364-383 | Msa1343140:intron | 40.0% | |
| GGACTGCCAATATATCCTTA+AGG | - | tig0006327:554-573 | None:intergenic | 40.0% | |
| TTGGTATATGCAGCATGATG+TGG | + | tig0006327:799-818 | Msa1343140:intron | 40.0% | |
| !! | GGTGTTGAAGAAAGTGGTTT+TGG | + | tig0006327:829-848 | Msa1343140:CDS | 40.0% |
| !!! | AAGAAAGTGGTTTTGGCTGA+TGG | + | tig0006327:836-855 | Msa1343140:CDS | 40.0% |
| GTAGAGGTAAAGTAAGAGGA+TGG | - | tig0006327:904-923 | None:intergenic | 40.0% | |
| AACGGTAGAGGTAAAGTAAG+AGG | - | tig0006327:908-927 | None:intergenic | 40.0% | |
| !!! | CCATTTTGGGTTCGGTTTAA+CGG | - | tig0006327:926-945 | None:intergenic | 40.0% |
| CATCAACCTCTTCCAATAAC+AGG | + | tig0006327:1065-1084 | Msa1343140:CDS | 40.0% | |
| CTTCAACCTGTTATTGGAAG+AGG | - | tig0006327:1074-1093 | None:intergenic | 40.0% | |
| !! | CAGGGAAGTGTCAACTAATT+TGG | - | tig0006327:1146-1165 | None:intergenic | 40.0% |
| !! | GAACCTTTTTCATTCGCCTT+AGG | - | tig0006327:1307-1326 | None:intergenic | 40.0% |
| CGAATGAAAAAGGTTCCTTC+AGG | + | tig0006327:1311-1330 | Msa1343140:CDS | 40.0% | |
| ATCAGCTTTCAACAACCTGA+AGG | - | tig0006327:1329-1348 | None:intergenic | 40.0% | |
| ! | GCTCAGACTTTTGTCAAGAT+AGG | + | tig0006327:1355-1374 | Msa1343140:CDS | 40.0% |
| AAGAAGTTGAAGGAAGGAGA+TGG | + | tig0006327:1391-1410 | Msa1343140:CDS | 40.0% | |
| AGAAGTTGAAGGAAGGAGAT+GGG | + | tig0006327:1392-1411 | Msa1343140:CDS | 40.0% | |
| GATTTGAAAATGCCCTCAAG+AGG | + | tig0006327:342-361 | Msa1343140:intron | 40.0% | |
| GGCTATAAATATCCCTCTTG+AGG | - | tig0006327:358-377 | None:intergenic | 40.0% | |
| GGATATTTATAGCCCTTCGT+GGG | + | tig0006327:364-383 | Msa1343140:intron | 40.0% | |
| GGACTGCCAATATATCCTTA+AGG | - | tig0006327:554-573 | None:intergenic | 40.0% | |
| TTGGTATATGCAGCATGATG+TGG | + | tig0006327:799-818 | Msa1343140:intron | 40.0% | |
| !! | GGTGTTGAAGAAAGTGGTTT+TGG | + | tig0006327:829-848 | Msa1343140:CDS | 40.0% |
| !!! | AAGAAAGTGGTTTTGGCTGA+TGG | + | tig0006327:836-855 | Msa1343140:CDS | 40.0% |
| GTAGAGGTAAAGTAAGAGGA+TGG | - | tig0006327:904-923 | None:intergenic | 40.0% | |
| AACGGTAGAGGTAAAGTAAG+AGG | - | tig0006327:908-927 | None:intergenic | 40.0% | |
| !!! | CCATTTTGGGTTCGGTTTAA+CGG | - | tig0006327:926-945 | None:intergenic | 40.0% |
| CATCAACCTCTTCCAATAAC+AGG | + | tig0006327:1065-1084 | Msa1343140:CDS | 40.0% | |
| CTTCAACCTGTTATTGGAAG+AGG | - | tig0006327:1074-1093 | None:intergenic | 40.0% | |
| !! | CAGGGAAGTGTCAACTAATT+TGG | - | tig0006327:1146-1165 | None:intergenic | 40.0% |
| !! | GAACCTTTTTCATTCGCCTT+AGG | - | tig0006327:1307-1326 | None:intergenic | 40.0% |
| CGAATGAAAAAGGTTCCTTC+AGG | + | tig0006327:1311-1330 | Msa1343140:CDS | 40.0% | |
| ATCAGCTTTCAACAACCTGA+AGG | - | tig0006327:1329-1348 | None:intergenic | 40.0% | |
| ! | GCTCAGACTTTTGTCAAGAT+AGG | + | tig0006327:1355-1374 | Msa1343140:CDS | 40.0% |
| AAGAAGTTGAAGGAAGGAGA+TGG | + | tig0006327:1391-1410 | Msa1343140:CDS | 40.0% | |
| AGAAGTTGAAGGAAGGAGAT+GGG | + | tig0006327:1392-1411 | Msa1343140:CDS | 40.0% | |
| AAGCTGAAACGGAGCCAAAA+CGG | - | tig0006327:11-30 | None:intergenic | 45.0% | |
| TCCTGAACCCAAATCTCCAT+GGG | - | tig0006327:40-59 | None:intergenic | 45.0% | |
| ATCCTGAACCCAAATCTCCA+TGG | - | tig0006327:41-60 | None:intergenic | 45.0% | |
| ! | GATTTGGGTTCAGGATGCTA+AGG | + | tig0006327:45-64 | Msa1343140:CDS | 45.0% |
| GGGATATTTATAGCCCTTCG+TGG | + | tig0006327:363-382 | Msa1343140:intron | 45.0% | |
| CTAGAAAACAAGCCCACGAA+GGG | - | tig0006327:379-398 | None:intergenic | 45.0% | |
| ACTAGAAAACAAGCCCACGA+AGG | - | tig0006327:380-399 | None:intergenic | 45.0% | |
| ! | ATGGAACCAGGTGTCACATA+AGG | - | tig0006327:647-666 | None:intergenic | 45.0% |
| CCGTTAAACCGAACCCAAAA+TGG | + | tig0006327:923-942 | Msa1343140:CDS | 45.0% | |
| !!! | CAGCAAAGCCATTTTGGGTT+CGG | - | tig0006327:934-953 | None:intergenic | 45.0% |
| !! | AAGAGGTTGATGCAGAGGAA+GGG | - | tig0006327:1057-1076 | None:intergenic | 45.0% |
| !! | ATTGGAAGAGGTTGATGCAG+AGG | - | tig0006327:1062-1081 | None:intergenic | 45.0% |
| GATCCATTAAGAGAGGCAAG+AGG | - | tig0006327:1235-1254 | None:intergenic | 45.0% | |
| ATCTTCTGTGTTGGGTCCTA+AGG | + | tig0006327:1288-1307 | Msa1343140:CDS | 45.0% | |
| GGTCCTAAGGCGAATGAAAA+AGG | + | tig0006327:1301-1320 | Msa1343140:CDS | 45.0% | |
| TCAGGCTGAGAAGAAGTTGA+AGG | + | tig0006327:1381-1400 | Msa1343140:CDS | 45.0% | |
| GCTGAGAAGAAGTTGAAGGA+AGG | + | tig0006327:1385-1404 | Msa1343140:CDS | 45.0% | |
| !! | AGGAGATGGGATTAGTTTCG+AGG | + | tig0006327:1405-1424 | Msa1343140:CDS | 45.0% |
| !! | GGAGATGGGATTAGTTTCGA+GGG | + | tig0006327:1406-1425 | Msa1343140:CDS | 45.0% |
| AAATGCAACCTCACAGTCTC+AGG | - | tig0006327:1454-1473 | None:intergenic | 45.0% | |
| ! | GACTGTGAGGTTGCATTTTG+AGG | + | tig0006327:1456-1475 | Msa1343140:CDS | 45.0% |
| !!! | GAGGTTGCATTTTGAGGTGT+TGG | + | tig0006327:1462-1481 | Msa1343140:CDS | 45.0% |
| !! | GAGGTGTTGGCTAAAGTTGA+TGG | + | tig0006327:1475-1494 | Msa1343140:CDS | 45.0% |
| TTCACTTGCATGACTCTCTC+AGG | - | tig0006327:1514-1533 | None:intergenic | 45.0% | |
| AAGCTGAAACGGAGCCAAAA+CGG | - | tig0006327:11-30 | None:intergenic | 45.0% | |
| TCCTGAACCCAAATCTCCAT+GGG | - | tig0006327:40-59 | None:intergenic | 45.0% | |
| ATCCTGAACCCAAATCTCCA+TGG | - | tig0006327:41-60 | None:intergenic | 45.0% | |
| ! | GATTTGGGTTCAGGATGCTA+AGG | + | tig0006327:45-64 | Msa1343140:CDS | 45.0% |
| GGGATATTTATAGCCCTTCG+TGG | + | tig0006327:363-382 | Msa1343140:intron | 45.0% | |
| CTAGAAAACAAGCCCACGAA+GGG | - | tig0006327:379-398 | None:intergenic | 45.0% | |
| ACTAGAAAACAAGCCCACGA+AGG | - | tig0006327:380-399 | None:intergenic | 45.0% | |
| ! | ATGGAACCAGGTGTCACATA+AGG | - | tig0006327:647-666 | None:intergenic | 45.0% |
| CCGTTAAACCGAACCCAAAA+TGG | + | tig0006327:923-942 | Msa1343140:CDS | 45.0% | |
| !!! | CAGCAAAGCCATTTTGGGTT+CGG | - | tig0006327:934-953 | None:intergenic | 45.0% |
| !! | AAGAGGTTGATGCAGAGGAA+GGG | - | tig0006327:1057-1076 | None:intergenic | 45.0% |
| !! | ATTGGAAGAGGTTGATGCAG+AGG | - | tig0006327:1062-1081 | None:intergenic | 45.0% |
| GATCCATTAAGAGAGGCAAG+AGG | - | tig0006327:1235-1254 | None:intergenic | 45.0% | |
| ATCTTCTGTGTTGGGTCCTA+AGG | + | tig0006327:1288-1307 | Msa1343140:CDS | 45.0% | |
| GGTCCTAAGGCGAATGAAAA+AGG | + | tig0006327:1301-1320 | Msa1343140:CDS | 45.0% | |
| TCAGGCTGAGAAGAAGTTGA+AGG | + | tig0006327:1381-1400 | Msa1343140:CDS | 45.0% | |
| GCTGAGAAGAAGTTGAAGGA+AGG | + | tig0006327:1385-1404 | Msa1343140:CDS | 45.0% | |
| !! | AGGAGATGGGATTAGTTTCG+AGG | + | tig0006327:1405-1424 | Msa1343140:CDS | 45.0% |
| !! | GGAGATGGGATTAGTTTCGA+GGG | + | tig0006327:1406-1425 | Msa1343140:CDS | 45.0% |
| AAATGCAACCTCACAGTCTC+AGG | - | tig0006327:1454-1473 | None:intergenic | 45.0% | |
| ! | GACTGTGAGGTTGCATTTTG+AGG | + | tig0006327:1456-1475 | Msa1343140:CDS | 45.0% |
| !!! | GAGGTTGCATTTTGAGGTGT+TGG | + | tig0006327:1462-1481 | Msa1343140:CDS | 45.0% |
| !! | GAGGTGTTGGCTAAAGTTGA+TGG | + | tig0006327:1475-1494 | Msa1343140:CDS | 45.0% |
| TTCACTTGCATGACTCTCTC+AGG | - | tig0006327:1514-1533 | None:intergenic | 45.0% | |
| AGCTGAAACGGAGCCAAAAC+GGG | - | tig0006327:10-29 | None:intergenic | 50.0% | |
| ATGGGTCCAGCAAGCTGAAA+CGG | - | tig0006327:22-41 | None:intergenic | 50.0% | |
| TTGCTGGACCCATGGAGATT+TGG | + | tig0006327:29-48 | Msa1343140:CDS | 50.0% | |
| TGCTGGACCCATGGAGATTT+GGG | + | tig0006327:30-49 | Msa1343140:CDS | 50.0% | |
| ! | ACCCATGGAGATTTGGGTTC+AGG | + | tig0006327:36-55 | Msa1343140:CDS | 50.0% |
| ACTTAAGCCCCAAGCAACCT+GGG | + | tig0006327:401-420 | Msa1343140:intron | 50.0% | |
| TTAAAGGCCCAGGTTGCTTG+GGG | - | tig0006327:411-430 | None:intergenic | 50.0% | |
| CTTAAAGGCCCAGGTTGCTT+GGG | - | tig0006327:412-431 | None:intergenic | 50.0% | |
| ACTTAAAGGCCCAGGTTGCT+TGG | - | tig0006327:413-432 | None:intergenic | 50.0% | |
| AGTTTAGGAGCCCTTCTGGA+GGG | + | tig0006327:498-517 | Msa1343140:intron | 50.0% | |
| ATGCAGCATGATGTGGATGC+TGG | + | tig0006327:806-825 | Msa1343140:intron | 50.0% | |
| TGCAGCATGATGTGGATGCT+GGG | + | tig0006327:807-826 | Msa1343140:intron | 50.0% | |
| !! | TGCTGGGGTGTTGAAGAAAG+TGG | + | tig0006327:823-842 | Msa1343140:CDS | 50.0% |
| GGTGCAGTGGTTACTGTGAA+AGG | + | tig0006327:857-876 | Msa1343140:CDS | 50.0% | |
| ! | TGGGTTCGGTTTAACGGTAG+AGG | - | tig0006327:920-939 | None:intergenic | 50.0% |
| ! | ACCCAAAATGGCTTTGCTGC+CGG | + | tig0006327:935-954 | Msa1343140:CDS | 50.0% |
| !! | GTGAAAGAAGGGGAGCATCT+TGG | - | tig0006327:1003-1022 | None:intergenic | 50.0% |
| GAAGGGGCTTCAAGTGAAGA+AGG | - | tig0006327:1040-1059 | None:intergenic | 50.0% | |
| !! | AGAGGTTGATGCAGAGGAAG+GGG | - | tig0006327:1056-1075 | None:intergenic | 50.0% |
| !! | GAAGAGGTTGATGCAGAGGA+AGG | - | tig0006327:1058-1077 | None:intergenic | 50.0% |
| AAGCTTAAGCGTCTTGCACC+TGG | + | tig0006327:1091-1110 | Msa1343140:CDS | 50.0% | |
| GACGATAACTCCACAAGACC+AGG | - | tig0006327:1112-1131 | None:intergenic | 50.0% | |
| CTGGAGATCAACGGTAGACA+GGG | - | tig0006327:1164-1183 | None:intergenic | 50.0% | |
| AGCTTCCTCCTGGAGATCAA+CGG | - | tig0006327:1173-1192 | None:intergenic | 50.0% | |
| ! | TGGGTTGGAGTAAGGAGAGT+CGG | - | tig0006327:1196-1215 | None:intergenic | 50.0% |
| ! | CGGTAAACTGGGTTGGAGTA+AGG | - | tig0006327:1204-1223 | None:intergenic | 50.0% |
| CACAATGCGGTAAACTGGGT+TGG | - | tig0006327:1211-1230 | None:intergenic | 50.0% | |
| CAACCCAGTTTACCGCATTG+TGG | + | tig0006327:1209-1228 | Msa1343140:CDS | 50.0% | |
| AGGCCACAATGCGGTAAACT+GGG | - | tig0006327:1215-1234 | None:intergenic | 50.0% | |
| TGGCCTCTTGCCTCTCTTAA+TGG | + | tig0006327:1229-1248 | Msa1343140:CDS | 50.0% | |
| GTTTCGAGGGTTTCCCTGAA+TGG | + | tig0006327:1419-1438 | Msa1343140:CDS | 50.0% | |
| CAGGCTTAGTCCTCCATTCA+GGG | - | tig0006327:1435-1454 | None:intergenic | 50.0% | |
| TCAGGCTTAGTCCTCCATTC+AGG | - | tig0006327:1436-1455 | None:intergenic | 50.0% | |
| AGCTGAAACGGAGCCAAAAC+GGG | - | tig0006327:10-29 | None:intergenic | 50.0% | |
| ATGGGTCCAGCAAGCTGAAA+CGG | - | tig0006327:22-41 | None:intergenic | 50.0% | |
| TTGCTGGACCCATGGAGATT+TGG | + | tig0006327:29-48 | Msa1343140:CDS | 50.0% | |
| TGCTGGACCCATGGAGATTT+GGG | + | tig0006327:30-49 | Msa1343140:CDS | 50.0% | |
| ! | ACCCATGGAGATTTGGGTTC+AGG | + | tig0006327:36-55 | Msa1343140:CDS | 50.0% |
| ACTTAAGCCCCAAGCAACCT+GGG | + | tig0006327:401-420 | Msa1343140:intron | 50.0% | |
| TTAAAGGCCCAGGTTGCTTG+GGG | - | tig0006327:411-430 | None:intergenic | 50.0% | |
| CTTAAAGGCCCAGGTTGCTT+GGG | - | tig0006327:412-431 | None:intergenic | 50.0% | |
| ACTTAAAGGCCCAGGTTGCT+TGG | - | tig0006327:413-432 | None:intergenic | 50.0% | |
| AGTTTAGGAGCCCTTCTGGA+GGG | + | tig0006327:498-517 | Msa1343140:intron | 50.0% | |
| ATGCAGCATGATGTGGATGC+TGG | + | tig0006327:806-825 | Msa1343140:intron | 50.0% | |
| TGCAGCATGATGTGGATGCT+GGG | + | tig0006327:807-826 | Msa1343140:intron | 50.0% | |
| !! | TGCTGGGGTGTTGAAGAAAG+TGG | + | tig0006327:823-842 | Msa1343140:CDS | 50.0% |
| GGTGCAGTGGTTACTGTGAA+AGG | + | tig0006327:857-876 | Msa1343140:CDS | 50.0% | |
| ! | TGGGTTCGGTTTAACGGTAG+AGG | - | tig0006327:920-939 | None:intergenic | 50.0% |
| ! | ACCCAAAATGGCTTTGCTGC+CGG | + | tig0006327:935-954 | Msa1343140:CDS | 50.0% |
| !! | GTGAAAGAAGGGGAGCATCT+TGG | - | tig0006327:1003-1022 | None:intergenic | 50.0% |
| GAAGGGGCTTCAAGTGAAGA+AGG | - | tig0006327:1040-1059 | None:intergenic | 50.0% | |
| !! | AGAGGTTGATGCAGAGGAAG+GGG | - | tig0006327:1056-1075 | None:intergenic | 50.0% |
| !! | GAAGAGGTTGATGCAGAGGA+AGG | - | tig0006327:1058-1077 | None:intergenic | 50.0% |
| AAGCTTAAGCGTCTTGCACC+TGG | + | tig0006327:1091-1110 | Msa1343140:CDS | 50.0% | |
| GACGATAACTCCACAAGACC+AGG | - | tig0006327:1112-1131 | None:intergenic | 50.0% | |
| CTGGAGATCAACGGTAGACA+GGG | - | tig0006327:1164-1183 | None:intergenic | 50.0% | |
| AGCTTCCTCCTGGAGATCAA+CGG | - | tig0006327:1173-1192 | None:intergenic | 50.0% | |
| ! | TGGGTTGGAGTAAGGAGAGT+CGG | - | tig0006327:1196-1215 | None:intergenic | 50.0% |
| ! | CGGTAAACTGGGTTGGAGTA+AGG | - | tig0006327:1204-1223 | None:intergenic | 50.0% |
| CACAATGCGGTAAACTGGGT+TGG | - | tig0006327:1211-1230 | None:intergenic | 50.0% | |
| CAACCCAGTTTACCGCATTG+TGG | + | tig0006327:1209-1228 | Msa1343140:CDS | 50.0% | |
| AGGCCACAATGCGGTAAACT+GGG | - | tig0006327:1215-1234 | None:intergenic | 50.0% | |
| TGGCCTCTTGCCTCTCTTAA+TGG | + | tig0006327:1229-1248 | Msa1343140:CDS | 50.0% | |
| GTTTCGAGGGTTTCCCTGAA+TGG | + | tig0006327:1419-1438 | Msa1343140:CDS | 50.0% | |
| CAGGCTTAGTCCTCCATTCA+GGG | - | tig0006327:1435-1454 | None:intergenic | 50.0% | |
| TCAGGCTTAGTCCTCCATTC+AGG | - | tig0006327:1436-1455 | None:intergenic | 50.0% | |
| TTGGCTCCGTTTCAGCTTGC+TGG | + | tig0006327:13-32 | Msa1343140:CDS | 55.0% | |
| !! | GTTTCAGCTTGCTGGACCCA+TGG | + | tig0006327:21-40 | Msa1343140:CDS | 55.0% |
| GACTTAAGCCCCAAGCAACC+TGG | + | tig0006327:400-419 | Msa1343140:intron | 55.0% | |
| CCAGAAGGGCTCCTAAACTC+AGG | - | tig0006327:497-516 | None:intergenic | 55.0% | |
| CCTGAGTTTAGGAGCCCTTC+TGG | + | tig0006327:494-513 | Msa1343140:intron | 55.0% | |
| GAGTTTAGGAGCCCTTCTGG+AGG | + | tig0006327:497-516 | Msa1343140:intron | 55.0% | |
| AATGCCCTCCAGAGAGGCTT+AGG | - | tig0006327:526-545 | None:intergenic | 55.0% | |
| !! | GGAGGGCATTTGTGCCCTTA+AGG | + | tig0006327:536-555 | Msa1343140:intron | 55.0% |
| GCAGCATGATGTGGATGCTG+GGG | + | tig0006327:808-827 | Msa1343140:intron | 55.0% | |
| !!! | GGTTTTGGCTGATGGTGCAG+TGG | + | tig0006327:844-863 | Msa1343140:CDS | 55.0% |
| !! | CCCGGCAGCAAAGCCATTTT+GGG | - | tig0006327:939-958 | None:intergenic | 55.0% |
| ! | CCCAAAATGGCTTTGCTGCC+GGG | + | tig0006327:936-955 | Msa1343140:CDS | 55.0% |
| CTCAGCCAACGTTAGAAGCC+CGG | - | tig0006327:957-976 | None:intergenic | 55.0% | |
| CATCTTGGCCACGAGAAGCA+TGG | - | tig0006327:988-1007 | None:intergenic | 55.0% | |
| CCTGGAGATCAACGGTAGAC+AGG | - | tig0006327:1165-1184 | None:intergenic | 55.0% | |
| CCTGTCTACCGTTGATCTCC+AGG | + | tig0006327:1162-1181 | Msa1343140:CDS | 55.0% | |
| GTCTACCGTTGATCTCCAGG+AGG | + | tig0006327:1165-1184 | Msa1343140:CDS | 55.0% | |
| GAGGCCACAATGCGGTAAAC+TGG | - | tig0006327:1216-1235 | None:intergenic | 55.0% | |
| AGAGGCAAGAGGCCACAATG+CGG | - | tig0006327:1224-1243 | None:intergenic | 55.0% | |
| TCGAGGGTTTCCCTGAATGG+AGG | + | tig0006327:1422-1441 | Msa1343140:CDS | 55.0% | |
| GGACTAAGCCTGAGACTGTG+AGG | + | tig0006327:1443-1462 | Msa1343140:CDS | 55.0% | |
| GCAAGTGAACCCTGTTGTCG+TGG | + | tig0006327:1525-1544 | Msa1343140:CDS | 55.0% | |
| AGTGAACCCTGTTGTCGTGG+AGG | + | tig0006327:1528-1547 | Msa1343140:CDS | 55.0% | |
| CACTGTCCTCCACGACAACA+GGG | - | tig0006327:1537-1556 | None:intergenic | 55.0% | |
| ACACTGTCCTCCACGACAAC+AGG | - | tig0006327:1538-1557 | None:intergenic | 55.0% | |
| TGTTGTCGTGGAGGACAGTG+TGG | + | tig0006327:1537-1556 | Msa1343140:CDS | 55.0% | |
| TACAAGGCAAAGGGGATGGG+CGG | - | tig0006327:1619-1638 | None:intergenic | 55.0% | |
| TTGGCTCCGTTTCAGCTTGC+TGG | + | tig0006327:13-32 | Msa1343140:CDS | 55.0% | |
| !! | GTTTCAGCTTGCTGGACCCA+TGG | + | tig0006327:21-40 | Msa1343140:CDS | 55.0% |
| GACTTAAGCCCCAAGCAACC+TGG | + | tig0006327:400-419 | Msa1343140:intron | 55.0% | |
| CCAGAAGGGCTCCTAAACTC+AGG | - | tig0006327:497-516 | None:intergenic | 55.0% | |
| CCTGAGTTTAGGAGCCCTTC+TGG | + | tig0006327:494-513 | Msa1343140:intron | 55.0% | |
| GAGTTTAGGAGCCCTTCTGG+AGG | + | tig0006327:497-516 | Msa1343140:intron | 55.0% | |
| AATGCCCTCCAGAGAGGCTT+AGG | - | tig0006327:526-545 | None:intergenic | 55.0% | |
| !! | GGAGGGCATTTGTGCCCTTA+AGG | + | tig0006327:536-555 | Msa1343140:intron | 55.0% |
| GCAGCATGATGTGGATGCTG+GGG | + | tig0006327:808-827 | Msa1343140:intron | 55.0% | |
| !!! | GGTTTTGGCTGATGGTGCAG+TGG | + | tig0006327:844-863 | Msa1343140:CDS | 55.0% |
| !! | CCCGGCAGCAAAGCCATTTT+GGG | - | tig0006327:939-958 | None:intergenic | 55.0% |
| ! | CCCAAAATGGCTTTGCTGCC+GGG | + | tig0006327:936-955 | Msa1343140:CDS | 55.0% |
| CTCAGCCAACGTTAGAAGCC+CGG | - | tig0006327:957-976 | None:intergenic | 55.0% | |
| CATCTTGGCCACGAGAAGCA+TGG | - | tig0006327:988-1007 | None:intergenic | 55.0% | |
| CCTGGAGATCAACGGTAGAC+AGG | - | tig0006327:1165-1184 | None:intergenic | 55.0% | |
| CCTGTCTACCGTTGATCTCC+AGG | + | tig0006327:1162-1181 | Msa1343140:CDS | 55.0% | |
| GTCTACCGTTGATCTCCAGG+AGG | + | tig0006327:1165-1184 | Msa1343140:CDS | 55.0% | |
| GAGGCCACAATGCGGTAAAC+TGG | - | tig0006327:1216-1235 | None:intergenic | 55.0% | |
| AGAGGCAAGAGGCCACAATG+CGG | - | tig0006327:1224-1243 | None:intergenic | 55.0% | |
| TCGAGGGTTTCCCTGAATGG+AGG | + | tig0006327:1422-1441 | Msa1343140:CDS | 55.0% | |
| GGACTAAGCCTGAGACTGTG+AGG | + | tig0006327:1443-1462 | Msa1343140:CDS | 55.0% | |
| GCAAGTGAACCCTGTTGTCG+TGG | + | tig0006327:1525-1544 | Msa1343140:CDS | 55.0% | |
| AGTGAACCCTGTTGTCGTGG+AGG | + | tig0006327:1528-1547 | Msa1343140:CDS | 55.0% | |
| CACTGTCCTCCACGACAACA+GGG | - | tig0006327:1537-1556 | None:intergenic | 55.0% | |
| ACACTGTCCTCCACGACAAC+AGG | - | tig0006327:1538-1557 | None:intergenic | 55.0% | |
| TGTTGTCGTGGAGGACAGTG+TGG | + | tig0006327:1537-1556 | Msa1343140:CDS | 55.0% | |
| TACAAGGCAAAGGGGATGGG+CGG | - | tig0006327:1619-1638 | None:intergenic | 55.0% | |
| GGCACAAATGCCCTCCAGAG+AGG | - | tig0006327:532-551 | None:intergenic | 60.0% | |
| ! | GCCCGGCAGCAAAGCCATTT+TGG | - | tig0006327:940-959 | None:intergenic | 60.0% |
| TGCTGCCGGGCTTCTAACGT+TGG | + | tig0006327:949-968 | Msa1343140:CDS | 60.0% | |
| CATCTCCGCCATGCTTCTCG+TGG | + | tig0006327:977-996 | Msa1343140:CDS | 60.0% | |
| ! | CTTGGCCACGAGAAGCATGG+CGG | - | tig0006327:985-1004 | None:intergenic | 60.0% |
| !! | GCGTCTTGCACCTGGTCTTG+TGG | + | tig0006327:1099-1118 | Msa1343140:CDS | 60.0% |
| GGCACAAATGCCCTCCAGAG+AGG | - | tig0006327:532-551 | None:intergenic | 60.0% | |
| ! | GCCCGGCAGCAAAGCCATTT+TGG | - | tig0006327:940-959 | None:intergenic | 60.0% |
| TGCTGCCGGGCTTCTAACGT+TGG | + | tig0006327:949-968 | Msa1343140:CDS | 60.0% | |
| CATCTCCGCCATGCTTCTCG+TGG | + | tig0006327:977-996 | Msa1343140:CDS | 60.0% | |
| ! | CTTGGCCACGAGAAGCATGG+CGG | - | tig0006327:985-1004 | None:intergenic | 60.0% |
| !! | GCGTCTTGCACCTGGTCTTG+TGG | + | tig0006327:1099-1118 | Msa1343140:CDS | 60.0% |
| CCTGTTGAGGCAGCGCCCTT+GGG | + | tig0006327:464-483 | Msa1343140:intron | 65.0% | |
| CTGTTGAGGCAGCGCCCTTG+GGG | + | tig0006327:465-484 | Msa1343140:intron | 65.0% | |
| TGTTGAGGCAGCGCCCTTGG+GGG | + | tig0006327:466-485 | Msa1343140:intron | 65.0% | |
| AACTCAGGCGCGTCCCCCAA+GGG | - | tig0006327:482-501 | None:intergenic | 65.0% | |
| AAACTCAGGCGCGTCCCCCA+AGG | - | tig0006327:483-502 | None:intergenic | 65.0% | |
| TGGGGGACGCGCCTGAGTTT+AGG | + | tig0006327:483-502 | Msa1343140:intron | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | - | tig0006327:511-530 | None:intergenic | 65.0% | |
| AGGCTTAGGCGCCCTCCAGA+AGG | - | tig0006327:512-531 | None:intergenic | 65.0% | |
| GGCGCCTAAGCCTCTCTGGA+GGG | + | tig0006327:519-538 | Msa1343140:intron | 65.0% | |
| GGAGAGTCGGAGCTTCCTCC+TGG | - | tig0006327:1183-1202 | None:intergenic | 65.0% | |
| ATGGGCGGAGGCTGAACGAG+TGG | - | tig0006327:1604-1623 | None:intergenic | 65.0% | |
| AAGGCAAAGGGGATGGGCGG+AGG | - | tig0006327:1616-1635 | None:intergenic | 65.0% | |
| CCTGTTGAGGCAGCGCCCTT+GGG | + | tig0006327:464-483 | Msa1343140:intron | 65.0% | |
| CTGTTGAGGCAGCGCCCTTG+GGG | + | tig0006327:465-484 | Msa1343140:intron | 65.0% | |
| TGTTGAGGCAGCGCCCTTGG+GGG | + | tig0006327:466-485 | Msa1343140:intron | 65.0% | |
| AACTCAGGCGCGTCCCCCAA+GGG | - | tig0006327:482-501 | None:intergenic | 65.0% | |
| AAACTCAGGCGCGTCCCCCA+AGG | - | tig0006327:483-502 | None:intergenic | 65.0% | |
| TGGGGGACGCGCCTGAGTTT+AGG | + | tig0006327:483-502 | Msa1343140:intron | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | - | tig0006327:511-530 | None:intergenic | 65.0% | |
| AGGCTTAGGCGCCCTCCAGA+AGG | - | tig0006327:512-531 | None:intergenic | 65.0% | |
| GGCGCCTAAGCCTCTCTGGA+GGG | + | tig0006327:519-538 | Msa1343140:intron | 65.0% | |
| GGAGAGTCGGAGCTTCCTCC+TGG | - | tig0006327:1183-1202 | None:intergenic | 65.0% | |
| ATGGGCGGAGGCTGAACGAG+TGG | - | tig0006327:1604-1623 | None:intergenic | 65.0% | |
| AAGGCAAAGGGGATGGGCGG+AGG | - | tig0006327:1616-1635 | None:intergenic | 65.0% | |
| GCCTGTTGAGGCAGCGCCCT+TGG | + | tig0006327:463-482 | Msa1343140:intron | 70.0% | |
| !! | CCCAAGGGCGCTGCCTCAAC+AGG | - | tig0006327:467-486 | None:intergenic | 70.0% |
| !! | GGAGGGCGCCTAAGCCTCTC+TGG | + | tig0006327:515-534 | Msa1343140:intron | 70.0% |
| GGGCGCCTAAGCCTCTCTGG+AGG | + | tig0006327:518-537 | Msa1343140:intron | 70.0% | |
| GCCTGTTGAGGCAGCGCCCT+TGG | + | tig0006327:463-482 | Msa1343140:intron | 70.0% | |
| !! | CCCAAGGGCGCTGCCTCAAC+AGG | - | tig0006327:467-486 | None:intergenic | 70.0% |
| !! | GGAGGGCGCCTAAGCCTCTC+TGG | + | tig0006327:515-534 | Msa1343140:intron | 70.0% |
| GGGCGCCTAAGCCTCTCTGG+AGG | + | tig0006327:518-537 | Msa1343140:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006327 | gene | 4 | 1639 | 4 | ID=Msa1343140;Name=Msa1343140 |
| tig0006327 | mRNA | 4 | 1639 | 4 | ID=Msa1343140-mRNA-1;Parent=Msa1343140;Name=Msa1343140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|303 |
| tig0006327 | exon | 4 | 87 | 4 | ID=Msa1343140-mRNA-1:exon:3983;Parent=Msa1343140-mRNA-1 |
| tig0006327 | exon | 812 | 1639 | 812 | ID=Msa1343140-mRNA-1:exon:3984;Parent=Msa1343140-mRNA-1 |
| tig0006327 | CDS | 4 | 87 | 4 | ID=Msa1343140-mRNA-1:cds;Parent=Msa1343140-mRNA-1 |
| tig0006327 | CDS | 812 | 1639 | 812 | ID=Msa1343140-mRNA-1:cds;Parent=Msa1343140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
