Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237060 | XP_003593965.2 | 72.159 | 176 | 31 | 3 | 1 | 161 | 1 | 173 | 1.02e-74 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237060 | G7IPZ8 | 72.159 | 176 | 31 | 3 | 1 | 161 | 1 | 173 | 4.87e-75 | 239 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0237060 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0237060 | Msa0277550 | 0.959975 | 4.891595e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237060 | MtrunA17_Chr2g0286191 | 71.918 | 146 | 25 | 2 | 32 | 161 | 16 | 161 | 1.90e-58 | 187 |
| Msa0237060 | MtrunA17_Chr4g0067121 | 47.692 | 130 | 53 | 1 | 40 | 154 | 46 | 175 | 5.39e-31 | 115 |
| Msa0237060 | MtrunA17_Chr2g0295761 | 43.796 | 137 | 63 | 1 | 38 | 160 | 53 | 189 | 1.33e-29 | 112 |
| Msa0237060 | MtrunA17_Chr2g0295741 | 40.741 | 135 | 64 | 2 | 37 | 155 | 38 | 172 | 3.52e-27 | 105 |
| Msa0237060 | MtrunA17_Chr2g0296121 | 40.260 | 154 | 72 | 3 | 36 | 173 | 117 | 266 | 1.41e-26 | 104 |
| Msa0237060 | MtrunA17_Chr2g0295711 | 38.312 | 154 | 76 | 3 | 33 | 170 | 34 | 184 | 3.60e-26 | 99.4 |
| Msa0237060 | MtrunA17_Chr2g0296111 | 41.791 | 134 | 62 | 2 | 37 | 154 | 31 | 164 | 2.70e-25 | 100 |
| Msa0237060 | MtrunA17_Chr2g0296301 | 39.552 | 134 | 67 | 1 | 41 | 160 | 32 | 165 | 2.58e-24 | 97.8 |
| Msa0237060 | MtrunA17_Chr2g0295731 | 36.170 | 141 | 74 | 2 | 33 | 157 | 35 | 175 | 2.96e-24 | 97.8 |
| Msa0237060 | MtrunA17_Chr2g0295751 | 37.195 | 164 | 71 | 4 | 10 | 157 | 28 | 175 | 3.80e-24 | 98.2 |
| Msa0237060 | MtrunA17_Chr2g0296151 | 39.375 | 160 | 72 | 4 | 17 | 155 | 11 | 166 | 8.17e-24 | 96.7 |
| Msa0237060 | MtrunA17_Chr4g0067671 | 36.667 | 180 | 87 | 5 | 1 | 160 | 1 | 173 | 2.03e-23 | 95.1 |
| Msa0237060 | MtrunA17_Chr2g0296191 | 39.535 | 129 | 64 | 1 | 40 | 154 | 177 | 305 | 6.59e-23 | 95.1 |
| Msa0237060 | MtrunA17_Chr2g0296191 | 37.681 | 138 | 68 | 3 | 38 | 157 | 655 | 792 | 1.99e-18 | 82.4 |
| Msa0237060 | MtrunA17_Chr2g0296181 | 36.429 | 140 | 73 | 2 | 34 | 157 | 40 | 179 | 5.27e-21 | 89.0 |
| Msa0237060 | MtrunA17_Chr2g0296711 | 32.051 | 156 | 84 | 4 | 45 | 178 | 53 | 208 | 2.85e-19 | 84.3 |
| Msa0237060 | MtrunA17_Chr2g0296231 | 35.338 | 133 | 70 | 2 | 41 | 157 | 45 | 177 | 1.80e-18 | 81.6 |
| Msa0237060 | MtrunA17_Chr2g0296221 | 37.778 | 135 | 66 | 3 | 38 | 154 | 72 | 206 | 2.39e-18 | 81.6 |
| Msa0237060 | MtrunA17_Chr2g0315731 | 33.871 | 186 | 96 | 4 | 9 | 167 | 25 | 210 | 4.24e-18 | 80.9 |
| Msa0237060 | MtrunA17_Chr2g0296721 | 33.908 | 174 | 90 | 3 | 9 | 157 | 5 | 178 | 1.26e-17 | 79.3 |
| Msa0237060 | MtrunA17_Chr4g0067141 | 34.884 | 129 | 70 | 1 | 40 | 154 | 39 | 167 | 2.25e-17 | 78.6 |
| Msa0237060 | MtrunA17_Chr2g0296171 | 36.719 | 128 | 63 | 3 | 45 | 154 | 60 | 187 | 2.03e-16 | 76.3 |
| Msa0237060 | MtrunA17_Chr2g0296251 | 33.987 | 153 | 78 | 3 | 7 | 145 | 3 | 146 | 5.76e-16 | 74.7 |
| Msa0237060 | MtrunA17_Chr2g0296291 | 40.000 | 120 | 55 | 3 | 37 | 142 | 26 | 142 | 6.96e-16 | 74.7 |
| Msa0237060 | MtrunA17_Chr2g0296561 | 40.594 | 101 | 46 | 1 | 47 | 133 | 38 | 138 | 1.38e-15 | 70.5 |
| Msa0237060 | MtrunA17_Chr4g0001831 | 35.821 | 134 | 71 | 2 | 43 | 162 | 35 | 167 | 2.12e-15 | 73.2 |
| Msa0237060 | MtrunA17_Chr2g0296741 | 31.447 | 159 | 89 | 4 | 38 | 178 | 63 | 219 | 2.46e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237060 | AT5G07900.1 | 34.043 | 141 | 79 | 1 | 36 | 162 | 59 | 199 | 6.01e-20 | 86.3 |
| Msa0237060 | AT3G46950.1 | 31.788 | 151 | 83 | 3 | 21 | 152 | 23 | 172 | 3.64e-19 | 84.3 |
| Msa0237060 | AT1G61960.1 | 34.400 | 125 | 68 | 1 | 43 | 153 | 49 | 173 | 9.66e-19 | 83.2 |
| Msa0237060 | AT1G62085.1 | 32.812 | 128 | 72 | 1 | 40 | 153 | 49 | 176 | 2.27e-18 | 82.0 |
| Msa0237060 | AT1G62085.2 | 32.812 | 128 | 72 | 1 | 40 | 153 | 49 | 176 | 2.27e-18 | 82.0 |
| Msa0237060 | AT1G61970.2 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61970.7 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61970.6 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61970.3 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61970.5 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61970.4 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61970.1 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0237060 | AT1G61980.3 | 35.075 | 134 | 71 | 2 | 41 | 160 | 47 | 178 | 5.42e-18 | 80.9 |
| Msa0237060 | AT1G61980.2 | 35.075 | 134 | 71 | 2 | 41 | 160 | 47 | 178 | 5.42e-18 | 80.9 |
| Msa0237060 | AT1G61980.1 | 35.075 | 134 | 71 | 2 | 41 | 160 | 47 | 178 | 5.42e-18 | 80.9 |
| Msa0237060 | AT1G21150.1 | 35.659 | 129 | 69 | 1 | 45 | 159 | 55 | 183 | 8.18e-18 | 80.5 |
| Msa0237060 | AT1G62120.1 | 32.308 | 130 | 74 | 1 | 38 | 153 | 48 | 177 | 9.94e-18 | 80.1 |
| Msa0237060 | AT1G21150.2 | 35.659 | 129 | 69 | 1 | 45 | 159 | 119 | 247 | 1.07e-17 | 80.1 |
| Msa0237060 | AT1G21150.3 | 34.000 | 150 | 82 | 2 | 24 | 159 | 1 | 147 | 1.82e-16 | 76.3 |
| Msa0237060 | AT5G23930.1 | 32.812 | 128 | 71 | 2 | 39 | 152 | 48 | 174 | 1.96e-14 | 70.9 |
| Msa0237060 | AT1G61990.2 | 31.111 | 135 | 76 | 2 | 43 | 163 | 49 | 180 | 1.78e-13 | 68.2 |
| Msa0237060 | AT1G61990.1 | 31.111 | 135 | 76 | 2 | 43 | 163 | 49 | 180 | 1.78e-13 | 68.2 |
| Msa0237060 | AT1G62150.1 | 27.344 | 128 | 79 | 1 | 40 | 153 | 52 | 179 | 1.97e-13 | 68.2 |
| Msa0237060 | AT1G62110.1 | 28.462 | 130 | 79 | 1 | 38 | 153 | 44 | 173 | 7.01e-13 | 66.2 |
Find 25 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAAAGATAGCAGGATTTC+TGG | 0.169200 | 2_2:-10127563 | None:intergenic |
| TGTCGTCCTCGGCTTGTTTC+CGG | 0.198431 | 2_2:+10131381 | Msa0237060:CDS |
| GAGAGTTTGGAAGCAGTTTC+TGG | 0.219164 | 2_2:-10127334 | None:intergenic |
| AACTATCTCATTCAAAATCT+TGG | 0.254769 | 2_2:+10127304 | Msa0237060:CDS |
| GAAACTGAATGTGAGGTTAT+TGG | 0.264454 | 2_2:-10127191 | None:intergenic |
| TGAGAGAAGAAAATTGAGTT+TGG | 0.273951 | 2_2:-10127503 | None:intergenic |
| ATGAAGATTGTGTTACTGTT+AGG | 0.281001 | 2_2:-10127219 | None:intergenic |
| GTCGTCCTCGGCTTGTTTCC+GGG | 0.297036 | 2_2:+10131382 | Msa0237060:CDS |
| TGGTTGTGAAAGTGTGATTT+TGG | 0.305443 | 2_2:-10127282 | None:intergenic |
| AAACTGAATGTGAGGTTATT+GGG | 0.314801 | 2_2:-10127190 | None:intergenic |
| AAAATTGAGTTTGGGAAGAA+TGG | 0.364283 | 2_2:-10127494 | None:intergenic |
| AATAATGAAAGGACTGAGTC+TGG | 0.403254 | 2_2:-10127388 | None:intergenic |
| GAGAGAAGAAAATTGAGTTT+GGG | 0.413372 | 2_2:-10127502 | None:intergenic |
| ACTATCTCATTCAAAATCTT+GGG | 0.413660 | 2_2:+10127305 | Msa0237060:CDS |
| TTGGGAAGATGAAGAAGAAA+AGG | 0.419196 | 2_2:-10127263 | None:intergenic |
| TGAAGATTGTGTTACTGTTA+GGG | 0.420451 | 2_2:-10127218 | None:intergenic |
| TGCAGCCTTTGTGTCGTCCT+CGG | 0.491420 | 2_2:+10131370 | Msa0237060:CDS |
| TGGGAAGATGAAGAAGAAAA+GGG | 0.491812 | 2_2:-10127262 | None:intergenic |
| AAGATGAAGAAGAAAAGGGT+TGG | 0.538838 | 2_2:-10127258 | None:intergenic |
| TTTGGAGCACAAGGAGTACC+CGG | 0.568225 | 2_2:-10131400 | None:intergenic |
| AACTGAATGTGAGGTTATTG+GGG | 0.569321 | 2_2:-10127189 | None:intergenic |
| TTTGATAAAATGATAACAAG+GGG | 0.581767 | 2_2:-10127608 | None:intergenic |
| TTCTGGTGATGATTTGAACA+AGG | 0.591029 | 2_2:-10127546 | None:intergenic |
| ACAAGCCGAGGACGACACAA+AGG | 0.613718 | 2_2:-10131375 | None:intergenic |
| GAGTACCCGGAAACAAGCCG+AGG | 0.703564 | 2_2:-10131387 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAAAAAAATCCTT+TGG | + | chr2_2:10127887-10127906 | Msa0237060:intron | 10.0% |
| !! | AATTAATAAAAAAATCCTTT+GGG | + | chr2_2:10127888-10127907 | Msa0237060:intron | 10.0% |
| !!! | TTTTGATAAAATGATAACAA+GGG | - | chr2_2:10127612-10127631 | None:intergenic | 15.0% |
| !! | AATTATATTTCAATACTTAC+TGG | + | chr2_2:10130725-10130744 | Msa0237060:intron | 15.0% |
| !! | TTTGATAAAATGATAACAAG+GGG | - | chr2_2:10127611-10127630 | None:intergenic | 20.0% |
| !!! | CTTTTGATAAAATGATAACA+AGG | - | chr2_2:10127613-10127632 | None:intergenic | 20.0% |
| !!! | GAAACATGAGTTATTTATTT+TGG | + | chr2_2:10128818-10128837 | Msa0237060:intron | 20.0% |
| !!! | AAGATGTCATATTTTTTATG+AGG | - | chr2_2:10129198-10129217 | None:intergenic | 20.0% |
| !! | AAAAATATGACATCTTGATT+TGG | + | chr2_2:10129202-10129221 | Msa0237060:intron | 20.0% |
| !! | AATATGGAAATAAAGATTCT+TGG | + | chr2_2:10129293-10129312 | Msa0237060:intron | 20.0% |
| !! | CTGAAATTCAAAACATTAAT+GGG | + | chr2_2:10129465-10129484 | Msa0237060:intron | 20.0% |
| !!! | TATTTTTCCTTATTAATCGA+TGG | + | chr2_2:10129681-10129700 | Msa0237060:intron | 20.0% |
| !!! | TAATACTTTAATTTAGTCGA+TGG | + | chr2_2:10129737-10129756 | Msa0237060:intron | 20.0% |
| !! | TAATTGTACACTTCATTATA+TGG | + | chr2_2:10129780-10129799 | Msa0237060:intron | 20.0% |
| !! | CATTTGAATAAAATTAGTGT+TGG | - | chr2_2:10130193-10130212 | None:intergenic | 20.0% |
| !!! | AATCATTCTAAAAGCATTTA+TGG | - | chr2_2:10130501-10130520 | None:intergenic | 20.0% |
| !!! | ATGCTTTTAGAATGATTTTA+TGG | + | chr2_2:10130504-10130523 | Msa0237060:intron | 20.0% |
| !!! | TCAGAGTATAAATAATTTGT+AGG | + | chr2_2:10130532-10130551 | Msa0237060:intron | 20.0% |
| !! | AAGATTTTGAATGAGATAGT+TGG | - | chr2_2:10127305-10127324 | None:intergenic | 25.0% |
| ! | AACTATCTCATTCAAAATCT+TGG | + | chr2_2:10127304-10127323 | Msa0237060:CDS | 25.0% |
| ! | ACTATCTCATTCAAAATCTT+GGG | + | chr2_2:10127305-10127324 | Msa0237060:CDS | 25.0% |
| ! | CATGTGATTTGAATAATGAA+AGG | - | chr2_2:10127402-10127421 | None:intergenic | 25.0% |
| ! | CTTTCATTATTCAAATCACA+TGG | + | chr2_2:10127400-10127419 | Msa0237060:intron | 25.0% |
| !! | GATCTAAAGAGAGAATTTTT+GGG | - | chr2_2:10127465-10127484 | None:intergenic | 25.0% |
| !! | AAGCTTTTATAAAAGATAGC+AGG | - | chr2_2:10127574-10127593 | None:intergenic | 25.0% |
| !! | TGCTATCTTTTATAAAAGCT+TGG | + | chr2_2:10127573-10127592 | Msa0237060:CDS | 25.0% |
| !!! | TCCTTATTTTGTTTCGAAAT+TGG | + | chr2_2:10127755-10127774 | Msa0237060:intron | 25.0% |
| ! | ACCAATTTCGAAACAAAATA+AGG | - | chr2_2:10127759-10127778 | None:intergenic | 25.0% |
| !!! | ACAATGAAAACAGTTGTTTT+GGG | - | chr2_2:10127853-10127872 | None:intergenic | 25.0% |
| !! | AACAATGAAAACAGTTGTTT+TGG | - | chr2_2:10127854-10127873 | None:intergenic | 25.0% |
| !! | ATAAAAAAATCCTTTGGGAA+AGG | + | chr2_2:10127893-10127912 | Msa0237060:intron | 25.0% |
| ! | AGATTGATGTGTATAAGAAA+TGG | + | chr2_2:10127917-10127936 | Msa0237060:intron | 25.0% |
| ! | GATTGATGTGTATAAGAAAT+GGG | + | chr2_2:10127918-10127937 | Msa0237060:intron | 25.0% |
| ! | ATTGATGTGTATAAGAAATG+GGG | + | chr2_2:10127919-10127938 | Msa0237060:intron | 25.0% |
| !!! | GAAATTTTTTGTTGATCACA+TGG | + | chr2_2:10128026-10128045 | Msa0237060:intron | 25.0% |
| ! | TTGAAATTTCTTGAGTCTAA+AGG | + | chr2_2:10128132-10128151 | Msa0237060:intron | 25.0% |
| ! | TTTGATTAAGGATGCTAAAT+TGG | + | chr2_2:10128155-10128174 | Msa0237060:intron | 25.0% |
| ! | AAAACAAACACTCAGAAATT+TGG | - | chr2_2:10128191-10128210 | None:intergenic | 25.0% |
| ! | AGAAAAAAGATGTTTCCAAT+AGG | + | chr2_2:10128271-10128290 | Msa0237060:intron | 25.0% |
| !!! | ATCTTTTTTCAACATCCTAT+TGG | - | chr2_2:10128289-10128308 | None:intergenic | 25.0% |
| ! | AATCAATGAAGGAATCTTAT+AGG | - | chr2_2:10128534-10128553 | None:intergenic | 25.0% |
| !! | AAGATTCCTTCATTGATTAA+AGG | + | chr2_2:10128536-10128555 | Msa0237060:intron | 25.0% |
| !! | AGATTCCTTCATTGATTAAA+GGG | + | chr2_2:10128537-10128556 | Msa0237060:intron | 25.0% |
| ! | AATATGGGTGAAAAATTCTA+AGG | + | chr2_2:10128753-10128772 | Msa0237060:intron | 25.0% |
| !!! | TGAAAAATTCTAAGGTCTTT+TGG | + | chr2_2:10128761-10128780 | Msa0237060:intron | 25.0% |
| !!! | GAGTTATTTATTTTGGTATG+CGG | + | chr2_2:10128825-10128844 | Msa0237060:intron | 25.0% |
| ! | GGTGATATCTCTATAAAATA+AGG | + | chr2_2:10128846-10128865 | Msa0237060:intron | 25.0% |
| !! | GTATAATACAATTTTGCTTG+TGG | + | chr2_2:10128940-10128959 | Msa0237060:intron | 25.0% |
| ! | ATATGTCTTAGAGTTGAATA+AGG | + | chr2_2:10129151-10129170 | Msa0237060:intron | 25.0% |
| ! | TATGTCTTAGAGTTGAATAA+GGG | + | chr2_2:10129152-10129171 | Msa0237060:intron | 25.0% |
| !!! | CCATTAATGTTTTGAATTTC+AGG | - | chr2_2:10129467-10129486 | None:intergenic | 25.0% |
| ! | CCTGAAATTCAAAACATTAA+TGG | + | chr2_2:10129464-10129483 | Msa0237060:intron | 25.0% |
| ! | AAATTCAAAACATTAATGGG+TGG | + | chr2_2:10129468-10129487 | Msa0237060:intron | 25.0% |
| !! | ACATATTCCATCGATTAATA+AGG | - | chr2_2:10129691-10129710 | None:intergenic | 25.0% |
| ! | TACCATAGAAAATAGGAATT+AGG | + | chr2_2:10130239-10130258 | Msa0237060:intron | 25.0% |
| !! | AACCTAATTCCTATTTTCTA+TGG | - | chr2_2:10130244-10130263 | None:intergenic | 25.0% |
| ! | TTGTTGAGGTTAAACATATA+TGG | + | chr2_2:10130381-10130400 | Msa0237060:intron | 25.0% |
| !! | AACATATATGGAGTTTGTTT+AGG | + | chr2_2:10130393-10130412 | Msa0237060:intron | 25.0% |
| ! | AGCAAATATGTATTACTTAC+AGG | + | chr2_2:10130759-10130778 | Msa0237060:intron | 25.0% |
| ! | ATATAAACTCAATCTAACTG+TGG | + | chr2_2:10130888-10130907 | Msa0237060:intron | 25.0% |
| ! | TAGAAGAACACAAGAAAAAA+GGG | - | chr2_2:10131343-10131362 | None:intergenic | 25.0% |
| AAACTGAATGTGAGGTTATT+GGG | - | chr2_2:10127193-10127212 | None:intergenic | 30.0% | |
| ! | TGAAGATTGTGTTACTGTTA+GGG | - | chr2_2:10127221-10127240 | None:intergenic | 30.0% |
| ! | ATGAAGATTGTGTTACTGTT+AGG | - | chr2_2:10127222-10127241 | None:intergenic | 30.0% |
| ! | TTGAATTTTGTTGGAGAGTT+TGG | - | chr2_2:10127350-10127369 | None:intergenic | 30.0% |
| ! | GGATCTAAAGAGAGAATTTT+TGG | - | chr2_2:10127466-10127485 | None:intergenic | 30.0% |
| !!! | TTGGGAAGAATGGTTTTATT+GGG | - | chr2_2:10127487-10127506 | None:intergenic | 30.0% |
| !!! | TTTGGGAAGAATGGTTTTAT+TGG | - | chr2_2:10127488-10127507 | None:intergenic | 30.0% |
| AAAATTGAGTTTGGGAAGAA+TGG | - | chr2_2:10127497-10127516 | None:intergenic | 30.0% | |
| GAGAGAAGAAAATTGAGTTT+GGG | - | chr2_2:10127505-10127524 | None:intergenic | 30.0% | |
| TGAGAGAAGAAAATTGAGTT+TGG | - | chr2_2:10127506-10127525 | None:intergenic | 30.0% | |
| ! | ACTCAATTTTCTTCTCTCAA+AGG | + | chr2_2:10127507-10127526 | Msa0237060:CDS | 30.0% |
| ! | CTCAATTTTCTTCTCTCAAA+GGG | + | chr2_2:10127508-10127527 | Msa0237060:CDS | 30.0% |
| ATAAAAGATAGCAGGATTTC+TGG | - | chr2_2:10127566-10127585 | None:intergenic | 30.0% | |
| ATTCAAATCCTGCTTCAAAA+TGG | + | chr2_2:10127715-10127734 | Msa0237060:intron | 30.0% | |
| TTCAAATCCTGCTTCAAAAT+GGG | + | chr2_2:10127716-10127735 | Msa0237060:intron | 30.0% | |
| AAAATAAGGACTTTAGACTC+AGG | - | chr2_2:10127745-10127764 | None:intergenic | 30.0% | |
| TTGGTGGAAGTAAATGAATT+AGG | + | chr2_2:10127820-10127839 | Msa0237060:intron | 30.0% | |
| !! | CAATGAAAACAGTTGTTTTG+GGG | - | chr2_2:10127852-10127871 | None:intergenic | 30.0% |
| ! | TTTTTGTTGATCACATGGAT+TGG | + | chr2_2:10128031-10128050 | Msa0237060:intron | 30.0% |
| AATTTCAAGACAAAAGCTCT+AGG | - | chr2_2:10128120-10128139 | None:intergenic | 30.0% | |
| TGAGTCTAAAGGTTTGATTA+AGG | + | chr2_2:10128143-10128162 | Msa0237060:intron | 30.0% | |
| AAACACTCAGAAATTTGGAA+AGG | - | chr2_2:10128186-10128205 | None:intergenic | 30.0% | |
| AATCTGAGAAGTTACATCAA+GGG | + | chr2_2:10128334-10128353 | Msa0237060:intron | 30.0% | |
| !!! | TAGAAGCTTGTTTTGAAGAT+AGG | + | chr2_2:10128408-10128427 | Msa0237060:intron | 30.0% |
| !!! | TCTCACATCTGTGATTTTTT+GGG | + | chr2_2:10128449-10128468 | Msa0237060:intron | 30.0% |
| ! | GTTTTCCCTTTAATCAATGA+AGG | - | chr2_2:10128545-10128564 | None:intergenic | 30.0% |
| ACAAGTAATCCTAGTCTAAA+TGG | - | chr2_2:10128573-10128592 | None:intergenic | 30.0% | |
| ! | CACCAGAGCATTTAAAATAT+GGG | + | chr2_2:10128738-10128757 | Msa0237060:intron | 30.0% |
| !!! | AAATTCTAAGGTCTTTTGGA+TGG | + | chr2_2:10128765-10128784 | Msa0237060:intron | 30.0% |
| TCTCTATAAAATAAGGTCGT+TGG | + | chr2_2:10128853-10128872 | Msa0237060:intron | 30.0% | |
| AATTTCTGTCAAACCGAAAA+GGG | - | chr2_2:10129087-10129106 | None:intergenic | 30.0% | |
| AAATTTCTGTCAAACCGAAA+AGG | - | chr2_2:10129088-10129107 | None:intergenic | 30.0% | |
| !! | TTTTCGGTTTGACAGAAATT+TGG | + | chr2_2:10129087-10129106 | Msa0237060:intron | 30.0% |
| ATGTCTTAGAGTTGAATAAG+GGG | + | chr2_2:10129153-10129172 | Msa0237060:intron | 30.0% | |
| ATTGTTATGTGTTCCTTACA+TGG | + | chr2_2:10129321-10129340 | Msa0237060:intron | 30.0% | |
| TTGTTATGTGTTCCTTACAT+GGG | + | chr2_2:10129322-10129341 | Msa0237060:intron | 30.0% | |
| ACTCAACTTGATATTTGAGT+AGG | - | chr2_2:10129406-10129425 | None:intergenic | 30.0% | |
| !! | ACTCAAATATCAAGTTGAGT+TGG | + | chr2_2:10129406-10129425 | Msa0237060:intron | 30.0% |
| ! | GTTGTTTACAATTCTAGAGA+TGG | + | chr2_2:10129428-10129447 | Msa0237060:intron | 30.0% |
| AATGTGATATCAAACTTTCC+TGG | - | chr2_2:10129511-10129530 | None:intergenic | 30.0% | |
| GTTTATAAAGAACTCACTAC+TGG | + | chr2_2:10129592-10129611 | Msa0237060:intron | 30.0% | |
| TAAAGTAACCAGCAAACATA+AGG | - | chr2_2:10129656-10129675 | None:intergenic | 30.0% | |
| ACACTTCATTATATGGTTAG+TGG | + | chr2_2:10129787-10129806 | Msa0237060:intron | 30.0% | |
| TCATTATATGGTTAGTGGTT+TGG | + | chr2_2:10129792-10129811 | Msa0237060:intron | 30.0% | |
| GAATCACAATTCTTTGCATT+TGG | - | chr2_2:10129975-10129994 | None:intergenic | 30.0% | |
| !! | TATCGCTGTTTTCTATACTT+AGG | + | chr2_2:10130094-10130113 | Msa0237060:intron | 30.0% |
| CTCATAAAGGGTTCAAAATT+TGG | - | chr2_2:10130151-10130170 | None:intergenic | 30.0% | |
| ! | CAAATTTTGAACCCTTTATG+AGG | + | chr2_2:10130149-10130168 | Msa0237060:intron | 30.0% |
| CTCATGATACCATAGAAAAT+AGG | + | chr2_2:10130232-10130251 | Msa0237060:intron | 30.0% | |
| AATCATATGCTGATAGAATG+AGG | - | chr2_2:10130564-10130583 | None:intergenic | 30.0% | |
| ATATGCATGAGGAATTAACA+TGG | - | chr2_2:10130663-10130682 | None:intergenic | 30.0% | |
| GTTTCTCAGAAAAGATGTAT+CGG | + | chr2_2:10130918-10130937 | Msa0237060:intron | 30.0% | |
| AGCCATTTACTGATCAAATA+AGG | + | chr2_2:10131028-10131047 | Msa0237060:intron | 30.0% | |
| ! | CACCTTATTTGATCAGTAAA+TGG | - | chr2_2:10131033-10131052 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGCAGTTCTGTTT+TGG | + | chr2_2:10131289-10131308 | Msa0237060:intron | 30.0% |
| GTAGAAGAACACAAGAAAAA+AGG | - | chr2_2:10131344-10131363 | None:intergenic | 30.0% | |
| AACTGAATGTGAGGTTATTG+GGG | - | chr2_2:10127192-10127211 | None:intergenic | 35.0% | |
| GAAACTGAATGTGAGGTTAT+TGG | - | chr2_2:10127194-10127213 | None:intergenic | 35.0% | |
| AAGATGAAGAAGAAAAGGGT+TGG | - | chr2_2:10127261-10127280 | None:intergenic | 35.0% | |
| TGGGAAGATGAAGAAGAAAA+GGG | - | chr2_2:10127265-10127284 | None:intergenic | 35.0% | |
| TTGGGAAGATGAAGAAGAAA+AGG | - | chr2_2:10127266-10127285 | None:intergenic | 35.0% | |
| !! | GGTTGTGAAAGTGTGATTTT+GGG | - | chr2_2:10127284-10127303 | None:intergenic | 35.0% |
| !! | TGGTTGTGAAAGTGTGATTT+TGG | - | chr2_2:10127285-10127304 | None:intergenic | 35.0% |
| !!! | GTCGTTGAGTTGAATTTTGT+TGG | - | chr2_2:10127359-10127378 | None:intergenic | 35.0% |
| AATAATGAAAGGACTGAGTC+TGG | - | chr2_2:10127391-10127410 | None:intergenic | 35.0% | |
| !! | TTTGATGAGAGTTGATAGCT+GGG | - | chr2_2:10127437-10127456 | None:intergenic | 35.0% |
| !!! | TTTTGATGAGAGTTGATAGC+TGG | - | chr2_2:10127438-10127457 | None:intergenic | 35.0% |
| ! | TTCTGGTGATGATTTGAACA+AGG | - | chr2_2:10127549-10127568 | None:intergenic | 35.0% |
| TCAAATCCTGCTTCAAAATG+GGG | + | chr2_2:10127717-10127736 | Msa0237060:intron | 35.0% | |
| ATGTGTATAAGAAATGGGGT+TGG | + | chr2_2:10127923-10127942 | Msa0237060:intron | 35.0% | |
| !!! | CAGCATTTTTGAAGTATCCA+TGG | + | chr2_2:10127965-10127984 | Msa0237060:intron | 35.0% |
| !! | GACTCAGCAAAAGAAGTATT+GGG | - | chr2_2:10128080-10128099 | None:intergenic | 35.0% |
| ! | AGACTCAGCAAAAGAAGTAT+TGG | - | chr2_2:10128081-10128100 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTCTTGAGAAA+AGG | + | chr2_2:10128088-10128107 | Msa0237060:intron | 35.0% |
| TTTGCTGAGTCTTGAGAAAA+GGG | + | chr2_2:10128089-10128108 | Msa0237060:intron | 35.0% | |
| ATTAAGGATGCTAAATTGGC+TGG | + | chr2_2:10128159-10128178 | Msa0237060:intron | 35.0% | |
| ! | AAGATTTTAAGCCGTGAGAT+TGG | + | chr2_2:10128304-10128323 | Msa0237060:intron | 35.0% |
| CAATCTGAGAAGTTACATCA+AGG | + | chr2_2:10128333-10128352 | Msa0237060:intron | 35.0% | |
| !!! | GTCTCACATCTGTGATTTTT+TGG | + | chr2_2:10128448-10128467 | Msa0237060:intron | 35.0% |
| !!! | CTCACATCTGTGATTTTTTG+GGG | + | chr2_2:10128450-10128469 | Msa0237060:intron | 35.0% |
| !!! | TCACATCTGTGATTTTTTGG+GGG | + | chr2_2:10128451-10128470 | Msa0237060:intron | 35.0% |
| AAACCACAACCATTTAGACT+AGG | + | chr2_2:10128561-10128580 | Msa0237060:intron | 35.0% | |
| AATCCTAGTCTAAATGGTTG+TGG | - | chr2_2:10128567-10128586 | None:intergenic | 35.0% | |
| AATAGGCAAAAGATGGAAGA+CGG | - | chr2_2:10128653-10128672 | None:intergenic | 35.0% | |
| TGCAACAAATAGGCAAAAGA+TGG | - | chr2_2:10128660-10128679 | None:intergenic | 35.0% | |
| CACATGGATATGCAACAAAT+AGG | - | chr2_2:10128670-10128689 | None:intergenic | 35.0% | |
| ! | GGATTTATTGCTCCATGTTT+TGG | - | chr2_2:10128719-10128738 | None:intergenic | 35.0% |
| !! | CCATATTTTAAATGCTCTGG+TGG | - | chr2_2:10128740-10128759 | None:intergenic | 35.0% |
| ! | CCACCAGAGCATTTAAAATA+TGG | + | chr2_2:10128737-10128756 | Msa0237060:intron | 35.0% |
| !! | CACCCATATTTTAAATGCTC+TGG | - | chr2_2:10128743-10128762 | None:intergenic | 35.0% |
| !! | ATCTTGATTTGGAGTGTTGA+GGG | + | chr2_2:10129213-10129232 | Msa0237060:intron | 35.0% |
| GTGATACTTCTTCAGATGTT+TGG | + | chr2_2:10129260-10129279 | Msa0237060:intron | 35.0% | |
| ! | TTCAGATGTTTGGCTTATGA+AGG | + | chr2_2:10129270-10129289 | Msa0237060:intron | 35.0% |
| ! | GTTTGGCTTATGAAGGAATA+TGG | + | chr2_2:10129277-10129296 | Msa0237060:intron | 35.0% |
| TTGATATTTGAGTAGGCACT+TGG | - | chr2_2:10129399-10129418 | None:intergenic | 35.0% | |
| ! | TCAAAACATTAATGGGTGGA+TGG | + | chr2_2:10129472-10129491 | Msa0237060:intron | 35.0% |
| TTATAAACCTCATGCACAAG+TGG | - | chr2_2:10129580-10129599 | None:intergenic | 35.0% | |
| TAACATACAAGTTGCAGCTA+GGG | - | chr2_2:10129629-10129648 | None:intergenic | 35.0% | |
| TTAACATACAAGTTGCAGCT+AGG | - | chr2_2:10129630-10129649 | None:intergenic | 35.0% | |
| !!! | GTCGATGGATAGTTTTTTGT+TGG | + | chr2_2:10129752-10129771 | Msa0237060:intron | 35.0% |
| ! | ATGGTTAGTGGTTTGGAATT+AGG | + | chr2_2:10129799-10129818 | Msa0237060:intron | 35.0% |
| !! | GAATTAGGTTTTATGCCCTT+TGG | + | chr2_2:10129814-10129833 | Msa0237060:intron | 35.0% |
| ! | TATATGGAGTTTGTTTAGGC+TGG | + | chr2_2:10130397-10130416 | Msa0237060:intron | 35.0% |
| !! | TAAAAGCATTTATGGAGACC+AGG | - | chr2_2:10130493-10130512 | None:intergenic | 35.0% |
| GTGTTTGAGAAATATGCATG+AGG | - | chr2_2:10130674-10130693 | None:intergenic | 35.0% | |
| AGTGTAAGAGTTCTACGTAT+TGG | - | chr2_2:10130830-10130849 | None:intergenic | 35.0% | |
| ! | GGGTTTTTACATAAGGATCA+TGG | - | chr2_2:10130992-10131011 | None:intergenic | 35.0% |
| !! | CAGGGGCTTCTTTAAAATTT+CGG | + | chr2_2:10131255-10131274 | Msa0237060:intron | 35.0% |
| !!! | GGGTTTTGAAACTGAATGTG+AGG | - | chr2_2:10127201-10127220 | None:intergenic | 40.0% |
| GAAGCCTTCAAGATTTGAGA+AGG | + | chr2_2:10127795-10127814 | Msa0237060:intron | 40.0% | |
| AACGCCTTCTCAAATCTTGA+AGG | - | chr2_2:10127802-10127821 | None:intergenic | 40.0% | |
| ! | TTCAAGATTTGAGAAGGCGT+TGG | + | chr2_2:10127801-10127820 | Msa0237060:intron | 40.0% |
| CATCAATCTTCCTTTCCCAA+AGG | - | chr2_2:10127906-10127925 | None:intergenic | 40.0% | |
| ! | GAAGTATCCATGGTGTATGT+TGG | + | chr2_2:10127975-10127994 | Msa0237060:intron | 40.0% |
| GGCATCTGTTCGTAAAATTG+AGG | + | chr2_2:10127996-10128015 | Msa0237060:intron | 40.0% | |
| GAAGTTTGTGTATTGCTTCG+AGG | + | chr2_2:10128215-10128234 | Msa0237060:intron | 40.0% | |
| TCAAATCCAGTAGATGACCA+TGG | - | chr2_2:10128374-10128393 | None:intergenic | 40.0% | |
| TGGTCATCTACTGGATTTGA+TGG | + | chr2_2:10128374-10128393 | Msa0237060:intron | 40.0% | |
| AGATAGGACTCATATGCAAG+TGG | + | chr2_2:10128424-10128443 | Msa0237060:intron | 40.0% | |
| ATAGGCAAAAGATGGAAGAC+GGG | - | chr2_2:10128652-10128671 | None:intergenic | 40.0% | |
| TCTTGACAGAATGACACACA+TGG | - | chr2_2:10128686-10128705 | None:intergenic | 40.0% | |
| GAGTCTTGCTTACCAAAACA+TGG | + | chr2_2:10128704-10128723 | Msa0237060:intron | 40.0% | |
| !! | CATTGTTTCTAACTCCCAGT+TGG | + | chr2_2:10128982-10129001 | Msa0237060:intron | 40.0% |
| TATATGAAGTCACACACCAC+CGG | - | chr2_2:10129027-10129046 | None:intergenic | 40.0% | |
| ! | AGTTTGTGTACTGCCCTTTT+CGG | + | chr2_2:10129071-10129090 | Msa0237060:intron | 40.0% |
| !! | CATCTTGATTTGGAGTGTTG+AGG | + | chr2_2:10129212-10129231 | Msa0237060:intron | 40.0% |
| TTCCTTACATGGGAGATGTT+GGG | + | chr2_2:10129332-10129351 | Msa0237060:intron | 40.0% | |
| TGGGTCGTATCTTTATACCA+AGG | + | chr2_2:10129351-10129370 | Msa0237060:intron | 40.0% | |
| ! | CTCAGTAAGATAAAGTGCCT+TGG | - | chr2_2:10129371-10129390 | None:intergenic | 40.0% |
| ! | CAAGGCACTTTATCTTACTG+AGG | + | chr2_2:10129369-10129388 | Msa0237060:intron | 40.0% |
| AACTTTCCTGGTAGACTTCA+GGG | - | chr2_2:10129499-10129518 | None:intergenic | 40.0% | |
| AAACTTTCCTGGTAGACTTC+AGG | - | chr2_2:10129500-10129519 | None:intergenic | 40.0% | |
| GTTAAGTGCCTTATGTTTGC+TGG | + | chr2_2:10129645-10129664 | Msa0237060:intron | 40.0% | |
| ACACAAAAGTGACAGCCAAA+GGG | - | chr2_2:10129832-10129851 | None:intergenic | 40.0% | |
| TACACAAAAGTGACAGCCAA+AGG | - | chr2_2:10129833-10129852 | None:intergenic | 40.0% | |
| GCTACTCTAACTATTGACCA+CGG | - | chr2_2:10129943-10129962 | None:intergenic | 40.0% | |
| ACATATAACCGTTGCGATGA+CGG | - | chr2_2:10130027-10130046 | None:intergenic | 40.0% | |
| ATTGTGTGACAGAGAAAGTG+TGG | - | chr2_2:10130052-10130071 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCTATACTTAGGC+TGG | + | chr2_2:10130098-10130117 | Msa0237060:intron | 40.0% |
| GGCTGGATCTCATTGTTTAA+TGG | + | chr2_2:10130115-10130134 | Msa0237060:intron | 40.0% | |
| ACCTAGCACTTCCTCATAAA+GGG | - | chr2_2:10130163-10130182 | None:intergenic | 40.0% | |
| AACCTAGCACTTCCTCATAA+AGG | - | chr2_2:10130164-10130183 | None:intergenic | 40.0% | |
| TCCAGTTGCACAGAGATTTA+GGG | - | chr2_2:10130359-10130378 | None:intergenic | 40.0% | |
| CTTGAATGCTGTCTCTTGAT+TGG | + | chr2_2:10130459-10130478 | Msa0237060:intron | 40.0% | |
| CAGAGACAAGCATGTTTCTT+TGG | + | chr2_2:10130587-10130606 | Msa0237060:intron | 40.0% | |
| ! | GTTGTATTTTCAGCTCTCCT+TGG | + | chr2_2:10130630-10130649 | Msa0237060:intron | 40.0% |
| ATTAACATGGAGATCGACCA+AGG | - | chr2_2:10130650-10130669 | None:intergenic | 40.0% | |
| TCACATACGTTCCAACTTGA+GGG | - | chr2_2:10130854-10130873 | None:intergenic | 40.0% | |
| !! | ATAAGGTGTCGAAGACTTGT+TGG | + | chr2_2:10131045-10131064 | Msa0237060:intron | 40.0% |
| TGAAACTCCACAATGAATCC+AGG | - | chr2_2:10131136-10131155 | None:intergenic | 40.0% | |
| GGATTCATTGTGGAGTTTCA+CGG | + | chr2_2:10131136-10131155 | Msa0237060:intron | 40.0% | |
| !! | TAAACAGAAGTGCTACAGCA+GGG | - | chr2_2:10131232-10131251 | None:intergenic | 40.0% |
| !! | CGAAATTTTAAAGAAGCCCC+TGG | - | chr2_2:10131257-10131276 | None:intergenic | 40.0% |
| !! | GGGCTTCTTTAAAATTTCGG+AGG | + | chr2_2:10131258-10131277 | Msa0237060:intron | 40.0% |
| !!! | ACACTTGATTTTGGAGCACA+AGG | - | chr2_2:10131412-10131431 | None:intergenic | 40.0% |
| GAGAGTTTGGAAGCAGTTTC+TGG | - | chr2_2:10127337-10127356 | None:intergenic | 45.0% | |
| !! | GCAGTTTTTGAGAGATGCGA+TGG | - | chr2_2:10127659-10127678 | None:intergenic | 45.0% |
| !! | AAGATTTGAGAAGGCGTTGG+TGG | + | chr2_2:10127804-10127823 | Msa0237060:intron | 45.0% |
| ACAGATGCCAACATACACCA+TGG | - | chr2_2:10127985-10128004 | None:intergenic | 45.0% | |
| ! | GGGTGTTTTGCAAGCACAAT+AGG | - | chr2_2:10128060-10128079 | None:intergenic | 45.0% |
| GATTGTGATCGCCAATCTCA+CGG | - | chr2_2:10128318-10128337 | None:intergenic | 45.0% | |
| ! | TGTTTCTAACTCCCAGTTGG+CGG | + | chr2_2:10128985-10129004 | Msa0237060:intron | 45.0% |
| AAACCTATAAGCAGCCAGTG+AGG | - | chr2_2:10129123-10129142 | None:intergenic | 45.0% | |
| ! | TCACTGGCTGCTTATAGGTT+TGG | + | chr2_2:10129122-10129141 | Msa0237060:intron | 45.0% |
| AGTTGAATAAGGGGCAGAAG+AGG | + | chr2_2:10129162-10129181 | Msa0237060:intron | 45.0% | |
| GTTCCTTACATGGGAGATGT+TGG | + | chr2_2:10129331-10129350 | Msa0237060:intron | 45.0% | |
| ! | TGTTATGCCACTTGTGCATG+AGG | + | chr2_2:10129570-10129589 | Msa0237060:intron | 45.0% |
| !! | ACCCTTTATGAGGAAGTGCT+AGG | + | chr2_2:10130159-10130178 | Msa0237060:intron | 45.0% |
| !! | GTGTTGACTGCTTGAATGAG+TGG | + | chr2_2:10130281-10130300 | Msa0237060:intron | 45.0% |
| TCCCTAAATCTCTGTGCAAC+TGG | + | chr2_2:10130355-10130374 | Msa0237060:intron | 45.0% | |
| CTCCAGTTGCACAGAGATTT+AGG | - | chr2_2:10130360-10130379 | None:intergenic | 45.0% | |
| !! | TGTGCAACTGGAGTTTGTTG+AGG | + | chr2_2:10130367-10130386 | Msa0237060:intron | 45.0% |
| !! | TCTTGATTGGAAAGTGCTCC+TGG | + | chr2_2:10130472-10130491 | Msa0237060:intron | 45.0% |
| CTCTTACACTACCCTCAAGT+TGG | + | chr2_2:10130840-10130859 | Msa0237060:intron | 45.0% | |
| CTCACATACGTTCCAACTTG+AGG | - | chr2_2:10130855-10130874 | None:intergenic | 45.0% | |
| AGATGTATCGGACATTCTCG+AGG | + | chr2_2:10130930-10130949 | Msa0237060:intron | 45.0% | |
| GATGTATCGGACATTCTCGA+GGG | + | chr2_2:10130931-10130950 | Msa0237060:intron | 45.0% | |
| ! | CAGGGAGGGGTTTTTACATA+AGG | - | chr2_2:10130999-10131018 | None:intergenic | 45.0% |
| TAAATGGCTCCTCCTGTACA+GGG | - | chr2_2:10131017-10131036 | None:intergenic | 45.0% | |
| GCAAAGAAGCAGGAGGAAAA+AGG | - | chr2_2:10131166-10131185 | None:intergenic | 45.0% | |
| !! | AAACAGAAGTGCTACAGCAG+GGG | - | chr2_2:10131231-10131250 | None:intergenic | 45.0% |
| !! | CTAAACAGAAGTGCTACAGC+AGG | - | chr2_2:10131233-10131252 | None:intergenic | 45.0% |
| CTGCTGTAGCACTTCTGTTT+AGG | + | chr2_2:10131231-10131250 | Msa0237060:intron | 45.0% | |
| TAGCACTTCTGTTTAGGCCA+GGG | + | chr2_2:10131237-10131256 | Msa0237060:intron | 45.0% | |
| !!! | CAGGAACCCCATTTTGAAGC+AGG | - | chr2_2:10127726-10127745 | None:intergenic | 50.0% |
| ACACGACCATGGTCATCTAC+TGG | + | chr2_2:10128365-10128384 | Msa0237060:intron | 50.0% | |
| CAGAAGGATTACCGCCAACT+GGG | - | chr2_2:10128999-10129018 | None:intergenic | 50.0% | |
| TCAGAAGGATTACCGCCAAC+TGG | - | chr2_2:10129000-10129019 | None:intergenic | 50.0% | |
| AGTTGGCGGTAATCCTTCTG+AGG | + | chr2_2:10128999-10129018 | Msa0237060:intron | 50.0% | |
| ! | CGGTAATCCTTCTGAGGATC+CGG | + | chr2_2:10129005-10129024 | Msa0237060:intron | 50.0% |
| ! | TAATCCTTCTGAGGATCCGG+TGG | + | chr2_2:10129008-10129027 | Msa0237060:intron | 50.0% |
| TTGGTTAACACCAGCCTCAC+TGG | + | chr2_2:10129106-10129125 | Msa0237060:intron | 50.0% | |
| GACCCAACATCTCCCATGTA+AGG | - | chr2_2:10129337-10129356 | None:intergenic | 50.0% | |
| TGAAGCAACATGAAGCTCCG+TGG | + | chr2_2:10129923-10129942 | Msa0237060:intron | 50.0% | |
| !! | ATAACCGTTGCGATGACGGA+TGG | - | chr2_2:10130023-10130042 | None:intergenic | 50.0% |
| GTAAAAACCCCTCCCTGTAC+AGG | + | chr2_2:10131002-10131021 | Msa0237060:intron | 50.0% | |
| GTAAATGGCTCCTCCTGTAC+AGG | - | chr2_2:10131018-10131037 | None:intergenic | 50.0% | |
| AAGAGCAGCAAAGAAGCAGG+AGG | - | chr2_2:10131173-10131192 | None:intergenic | 50.0% | |
| ACGAAGAGCAGCAAAGAAGC+AGG | - | chr2_2:10131176-10131195 | None:intergenic | 50.0% | |
| GGGAAAATACCAGCAGAGAG+CGG | - | chr2_2:10131211-10131230 | None:intergenic | 50.0% | |
| GTAGCACTTCTGTTTAGGCC+AGG | + | chr2_2:10131236-10131255 | Msa0237060:intron | 50.0% | |
| AGCACTTCTGTTTAGGCCAG+GGG | + | chr2_2:10131238-10131257 | Msa0237060:intron | 50.0% | |
| !! | TTTGGAGCACAAGGAGTACC+CGG | - | chr2_2:10131403-10131422 | None:intergenic | 50.0% |
| CTATAAGCAGCCAGTGAGGC+TGG | - | chr2_2:10129119-10129138 | None:intergenic | 55.0% | |
| ! | CAGCCTCACTGGCTGCTTAT+AGG | + | chr2_2:10129117-10129136 | Msa0237060:intron | 55.0% |
| GATGGTCCCTGAAGTCTACC+AGG | + | chr2_2:10129490-10129509 | Msa0237060:intron | 55.0% | |
| TGCTCAAAACCGCGTGTTGC+TGG | + | chr2_2:10129894-10129913 | Msa0237060:intron | 55.0% | |
| ! | GCTCAAAACCGCGTGTTGCT+GGG | + | chr2_2:10129895-10129914 | Msa0237060:intron | 55.0% |
| TCAGACATCCCAGCAACACG+CGG | - | chr2_2:10129906-10129925 | None:intergenic | 55.0% | |
| TCCACCATCCGTCATCGCAA+CGG | + | chr2_2:10130016-10130035 | Msa0237060:intron | 55.0% | |
| AAAACCCCTCCCTGTACAGG+AGG | + | chr2_2:10131005-10131024 | Msa0237060:intron | 55.0% | |
| TTGCTGCGACTCTTTCCGAG+CGG | + | chr2_2:10131109-10131128 | Msa0237060:intron | 55.0% | |
| ACAATGAATCCAGGCCCGCT+CGG | - | chr2_2:10131127-10131146 | None:intergenic | 55.0% | |
| TGCAGCCTTTGTGTCGTCCT+CGG | + | chr2_2:10131370-10131389 | Msa0237060:CDS | 55.0% | |
| ACAAGCCGAGGACGACACAA+AGG | - | chr2_2:10131378-10131397 | None:intergenic | 55.0% | |
| ! | TGTCGTCCTCGGCTTGTTTC+CGG | + | chr2_2:10131381-10131400 | Msa0237060:CDS | 55.0% |
| CACACCACCGGATCCTCAGA+AGG | - | chr2_2:10129015-10129034 | None:intergenic | 60.0% | |
| !! | GTTGCGATGACGGATGGTGG+AGG | - | chr2_2:10130017-10130036 | None:intergenic | 60.0% |
| !! | ACCGTTGCGATGACGGATGG+TGG | - | chr2_2:10130020-10130039 | None:intergenic | 60.0% |
| TGGCTCCTCCTGTACAGGGA+GGG | - | chr2_2:10131013-10131032 | None:intergenic | 60.0% | |
| ATGGCTCCTCCTGTACAGGG+AGG | - | chr2_2:10131014-10131033 | None:intergenic | 60.0% | |
| TGCTGCGACTCTTTCCGAGC+GGG | + | chr2_2:10131110-10131129 | Msa0237060:intron | 60.0% | |
| GAGCGGGCCTGGATTCATTG+TGG | + | chr2_2:10131126-10131145 | Msa0237060:intron | 60.0% | |
| GCTGCTCTTCGTCATGCTGC+TGG | + | chr2_2:10131184-10131203 | Msa0237060:intron | 60.0% | |
| ! | GTCGTCCTCGGCTTGTTTCC+GGG | + | chr2_2:10131382-10131401 | Msa0237060:CDS | 60.0% |
| GAGTACCCGGAAACAAGCCG+AGG | - | chr2_2:10131390-10131409 | None:intergenic | 60.0% | |
| GGGTCTCTGCGACACGACCA+TGG | + | chr2_2:10128354-10128373 | Msa0237060:intron | 65.0% | |
| GGCTCCTCCTGTACAGGGAG+GGG | - | chr2_2:10131012-10131031 | None:intergenic | 65.0% | |
| CGACTCTTTCCGAGCGGGCC+TGG | + | chr2_2:10131115-10131134 | Msa0237060:intron | 70.0% | |
| GCTGCTGGTCCGCTCTCTGC+TGG | + | chr2_2:10131199-10131218 | Msa0237060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 10127157 | 10131437 | 10127157 | ID=Msa0237060;Name=Msa0237060 |
| chr2_2 | mRNA | 10127157 | 10131437 | 10127157 | ID=Msa0237060-mRNA-1;Parent=Msa0237060;Name=Msa0237060-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.5|0|0|4|0|185 |
| chr2_2 | exon | 10127157 | 10127396 | 10127157 | ID=Msa0237060-mRNA-1:exon:4380;Parent=Msa0237060-mRNA-1 |
| chr2_2 | exon | 10127439 | 10127682 | 10127439 | ID=Msa0237060-mRNA-1:exon:4381;Parent=Msa0237060-mRNA-1 |
| chr2_2 | exon | 10129001 | 10129006 | 10129001 | ID=Msa0237060-mRNA-1:exon:4382;Parent=Msa0237060-mRNA-1 |
| chr2_2 | exon | 10131370 | 10131437 | 10131370 | ID=Msa0237060-mRNA-1:exon:4383;Parent=Msa0237060-mRNA-1 |
| chr2_2 | CDS | 10127157 | 10127396 | 10127157 | ID=Msa0237060-mRNA-1:cds;Parent=Msa0237060-mRNA-1 |
| chr2_2 | CDS | 10127439 | 10127682 | 10127439 | ID=Msa0237060-mRNA-1:cds;Parent=Msa0237060-mRNA-1 |
| chr2_2 | CDS | 10129001 | 10129006 | 10129001 | ID=Msa0237060-mRNA-1:cds;Parent=Msa0237060-mRNA-1 |
| chr2_2 | CDS | 10131370 | 10131437 | 10131370 | ID=Msa0237060-mRNA-1:cds;Parent=Msa0237060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
