Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277550 | XP_003593965.2 | 72.159 | 176 | 31 | 3 | 1 | 161 | 1 | 173 | 1.02e-74 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277550 | G7IPZ8 | 72.159 | 176 | 31 | 3 | 1 | 161 | 1 | 173 | 4.87e-75 | 239 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0277550 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0237060 | Msa0277550 | 0.959975 | 4.891595e-118 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277550 | MtrunA17_Chr2g0286191 | 71.918 | 146 | 25 | 2 | 32 | 161 | 16 | 161 | 1.90e-58 | 187 |
| Msa0277550 | MtrunA17_Chr4g0067121 | 47.692 | 130 | 53 | 1 | 40 | 154 | 46 | 175 | 5.39e-31 | 115 |
| Msa0277550 | MtrunA17_Chr2g0295761 | 43.796 | 137 | 63 | 1 | 38 | 160 | 53 | 189 | 1.33e-29 | 112 |
| Msa0277550 | MtrunA17_Chr2g0295741 | 40.741 | 135 | 64 | 2 | 37 | 155 | 38 | 172 | 3.52e-27 | 105 |
| Msa0277550 | MtrunA17_Chr2g0296121 | 40.260 | 154 | 72 | 3 | 36 | 173 | 117 | 266 | 1.41e-26 | 104 |
| Msa0277550 | MtrunA17_Chr2g0295711 | 38.312 | 154 | 76 | 3 | 33 | 170 | 34 | 184 | 3.60e-26 | 99.4 |
| Msa0277550 | MtrunA17_Chr2g0296111 | 41.791 | 134 | 62 | 2 | 37 | 154 | 31 | 164 | 2.70e-25 | 100 |
| Msa0277550 | MtrunA17_Chr2g0296301 | 39.552 | 134 | 67 | 1 | 41 | 160 | 32 | 165 | 2.58e-24 | 97.8 |
| Msa0277550 | MtrunA17_Chr2g0295731 | 36.170 | 141 | 74 | 2 | 33 | 157 | 35 | 175 | 2.96e-24 | 97.8 |
| Msa0277550 | MtrunA17_Chr2g0295751 | 37.195 | 164 | 71 | 4 | 10 | 157 | 28 | 175 | 3.80e-24 | 98.2 |
| Msa0277550 | MtrunA17_Chr2g0296151 | 39.375 | 160 | 72 | 4 | 17 | 155 | 11 | 166 | 8.17e-24 | 96.7 |
| Msa0277550 | MtrunA17_Chr4g0067671 | 36.667 | 180 | 87 | 5 | 1 | 160 | 1 | 173 | 2.03e-23 | 95.1 |
| Msa0277550 | MtrunA17_Chr2g0296191 | 39.535 | 129 | 64 | 1 | 40 | 154 | 177 | 305 | 6.59e-23 | 95.1 |
| Msa0277550 | MtrunA17_Chr2g0296191 | 37.681 | 138 | 68 | 3 | 38 | 157 | 655 | 792 | 1.99e-18 | 82.4 |
| Msa0277550 | MtrunA17_Chr2g0296181 | 36.429 | 140 | 73 | 2 | 34 | 157 | 40 | 179 | 5.27e-21 | 89.0 |
| Msa0277550 | MtrunA17_Chr2g0296711 | 32.051 | 156 | 84 | 4 | 45 | 178 | 53 | 208 | 2.85e-19 | 84.3 |
| Msa0277550 | MtrunA17_Chr2g0296231 | 35.338 | 133 | 70 | 2 | 41 | 157 | 45 | 177 | 1.80e-18 | 81.6 |
| Msa0277550 | MtrunA17_Chr2g0296221 | 37.778 | 135 | 66 | 3 | 38 | 154 | 72 | 206 | 2.39e-18 | 81.6 |
| Msa0277550 | MtrunA17_Chr2g0315731 | 33.871 | 186 | 96 | 4 | 9 | 167 | 25 | 210 | 4.24e-18 | 80.9 |
| Msa0277550 | MtrunA17_Chr2g0296721 | 33.908 | 174 | 90 | 3 | 9 | 157 | 5 | 178 | 1.26e-17 | 79.3 |
| Msa0277550 | MtrunA17_Chr4g0067141 | 34.884 | 129 | 70 | 1 | 40 | 154 | 39 | 167 | 2.25e-17 | 78.6 |
| Msa0277550 | MtrunA17_Chr2g0296171 | 36.719 | 128 | 63 | 3 | 45 | 154 | 60 | 187 | 2.03e-16 | 76.3 |
| Msa0277550 | MtrunA17_Chr2g0296251 | 33.987 | 153 | 78 | 3 | 7 | 145 | 3 | 146 | 5.76e-16 | 74.7 |
| Msa0277550 | MtrunA17_Chr2g0296291 | 40.000 | 120 | 55 | 3 | 37 | 142 | 26 | 142 | 6.96e-16 | 74.7 |
| Msa0277550 | MtrunA17_Chr2g0296561 | 40.594 | 101 | 46 | 1 | 47 | 133 | 38 | 138 | 1.38e-15 | 70.5 |
| Msa0277550 | MtrunA17_Chr4g0001831 | 35.821 | 134 | 71 | 2 | 43 | 162 | 35 | 167 | 2.12e-15 | 73.2 |
| Msa0277550 | MtrunA17_Chr2g0296741 | 31.447 | 159 | 89 | 4 | 38 | 178 | 63 | 219 | 2.46e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0277550 | AT5G07900.1 | 34.043 | 141 | 79 | 1 | 36 | 162 | 59 | 199 | 6.01e-20 | 86.3 |
| Msa0277550 | AT3G46950.1 | 31.788 | 151 | 83 | 3 | 21 | 152 | 23 | 172 | 3.64e-19 | 84.3 |
| Msa0277550 | AT1G61960.1 | 34.400 | 125 | 68 | 1 | 43 | 153 | 49 | 173 | 9.66e-19 | 83.2 |
| Msa0277550 | AT1G62085.1 | 32.812 | 128 | 72 | 1 | 40 | 153 | 49 | 176 | 2.27e-18 | 82.0 |
| Msa0277550 | AT1G62085.2 | 32.812 | 128 | 72 | 1 | 40 | 153 | 49 | 176 | 2.27e-18 | 82.0 |
| Msa0277550 | AT1G61970.2 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61970.7 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61970.6 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61970.3 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61970.5 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61970.4 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61970.1 | 35.484 | 124 | 66 | 1 | 43 | 152 | 49 | 172 | 5.21e-18 | 80.9 |
| Msa0277550 | AT1G61980.3 | 35.075 | 134 | 71 | 2 | 41 | 160 | 47 | 178 | 5.42e-18 | 80.9 |
| Msa0277550 | AT1G61980.2 | 35.075 | 134 | 71 | 2 | 41 | 160 | 47 | 178 | 5.42e-18 | 80.9 |
| Msa0277550 | AT1G61980.1 | 35.075 | 134 | 71 | 2 | 41 | 160 | 47 | 178 | 5.42e-18 | 80.9 |
| Msa0277550 | AT1G21150.1 | 35.659 | 129 | 69 | 1 | 45 | 159 | 55 | 183 | 8.18e-18 | 80.5 |
| Msa0277550 | AT1G62120.1 | 32.308 | 130 | 74 | 1 | 38 | 153 | 48 | 177 | 9.94e-18 | 80.1 |
| Msa0277550 | AT1G21150.2 | 35.659 | 129 | 69 | 1 | 45 | 159 | 119 | 247 | 1.07e-17 | 80.1 |
| Msa0277550 | AT1G21150.3 | 34.000 | 150 | 82 | 2 | 24 | 159 | 1 | 147 | 1.82e-16 | 76.3 |
| Msa0277550 | AT5G23930.1 | 32.812 | 128 | 71 | 2 | 39 | 152 | 48 | 174 | 1.96e-14 | 70.9 |
| Msa0277550 | AT1G61990.2 | 31.111 | 135 | 76 | 2 | 43 | 163 | 49 | 180 | 1.78e-13 | 68.2 |
| Msa0277550 | AT1G61990.1 | 31.111 | 135 | 76 | 2 | 43 | 163 | 49 | 180 | 1.78e-13 | 68.2 |
| Msa0277550 | AT1G62150.1 | 27.344 | 128 | 79 | 1 | 40 | 153 | 52 | 179 | 1.97e-13 | 68.2 |
| Msa0277550 | AT1G62110.1 | 28.462 | 130 | 79 | 1 | 38 | 153 | 44 | 173 | 7.01e-13 | 66.2 |
Find 25 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAAAGATAGCAGGATTTC+TGG | 0.169200 | 2_3:-10133956 | None:intergenic |
| TGTCGTCCTCGGCTTGTTTC+CGG | 0.198431 | 2_3:+10137774 | Msa0277550:CDS |
| GAGAGTTTGGAAGCAGTTTC+TGG | 0.219164 | 2_3:-10133727 | None:intergenic |
| AACTATCTCATTCAAAATCT+TGG | 0.254769 | 2_3:+10133697 | Msa0277550:CDS |
| GAAACTGAATGTGAGGTTAT+TGG | 0.264454 | 2_3:-10133584 | None:intergenic |
| TGAGAGAAGAAAATTGAGTT+TGG | 0.273951 | 2_3:-10133896 | None:intergenic |
| ATGAAGATTGTGTTACTGTT+AGG | 0.281001 | 2_3:-10133612 | None:intergenic |
| GTCGTCCTCGGCTTGTTTCC+GGG | 0.297036 | 2_3:+10137775 | Msa0277550:CDS |
| TGGTTGTGAAAGTGTGATTT+TGG | 0.305443 | 2_3:-10133675 | None:intergenic |
| AAACTGAATGTGAGGTTATT+GGG | 0.314801 | 2_3:-10133583 | None:intergenic |
| AAAATTGAGTTTGGGAAGAA+TGG | 0.364283 | 2_3:-10133887 | None:intergenic |
| AATAATGAAAGGACTGAGTC+TGG | 0.403254 | 2_3:-10133781 | None:intergenic |
| GAGAGAAGAAAATTGAGTTT+GGG | 0.413372 | 2_3:-10133895 | None:intergenic |
| ACTATCTCATTCAAAATCTT+GGG | 0.413660 | 2_3:+10133698 | Msa0277550:CDS |
| TTGGGAAGATGAAGAAGAAA+AGG | 0.419196 | 2_3:-10133656 | None:intergenic |
| TGAAGATTGTGTTACTGTTA+GGG | 0.420451 | 2_3:-10133611 | None:intergenic |
| TGCAGCCTTTGTGTCGTCCT+CGG | 0.491420 | 2_3:+10137763 | Msa0277550:CDS |
| TGGGAAGATGAAGAAGAAAA+GGG | 0.491812 | 2_3:-10133655 | None:intergenic |
| AAGATGAAGAAGAAAAGGGT+TGG | 0.538838 | 2_3:-10133651 | None:intergenic |
| TTTGGAGCACAAGGAGTACC+CGG | 0.568225 | 2_3:-10137793 | None:intergenic |
| AACTGAATGTGAGGTTATTG+GGG | 0.569321 | 2_3:-10133582 | None:intergenic |
| TTTGATAAAATGATAACAAG+GGG | 0.581767 | 2_3:-10134001 | None:intergenic |
| TTCTGGTGATGATTTGAACA+AGG | 0.591029 | 2_3:-10133939 | None:intergenic |
| ACAAGCCGAGGACGACACAA+AGG | 0.613718 | 2_3:-10137768 | None:intergenic |
| GAGTACCCGGAAACAAGCCG+AGG | 0.703564 | 2_3:-10137780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATAAAAAAATCCTT+TGG | + | chr2_3:10134280-10134299 | Msa0277550:intron | 10.0% |
| !! | AATTAATAAAAAAATCCTTT+GGG | + | chr2_3:10134281-10134300 | Msa0277550:intron | 10.0% |
| !!! | TTTTGATAAAATGATAACAA+GGG | - | chr2_3:10134005-10134024 | None:intergenic | 15.0% |
| !!! | TCAAAGTATAAATAATTTGT+AGG | + | chr2_3:10136925-10136944 | Msa0277550:intron | 15.0% |
| !! | AATTATATTTCAATACTTAC+TGG | + | chr2_3:10137118-10137137 | Msa0277550:intron | 15.0% |
| !! | TTTGATAAAATGATAACAAG+GGG | - | chr2_3:10134004-10134023 | None:intergenic | 20.0% |
| !!! | CTTTTGATAAAATGATAACA+AGG | - | chr2_3:10134006-10134025 | None:intergenic | 20.0% |
| !!! | GAAACATGAGTTATTTATTT+TGG | + | chr2_3:10135211-10135230 | Msa0277550:intron | 20.0% |
| !!! | AAGATGTCATATTTTTTATG+AGG | - | chr2_3:10135591-10135610 | None:intergenic | 20.0% |
| !! | AAAAATATGACATCTTGATT+TGG | + | chr2_3:10135595-10135614 | Msa0277550:intron | 20.0% |
| !! | AATATGGAAATAAAGATTCT+TGG | + | chr2_3:10135686-10135705 | Msa0277550:intron | 20.0% |
| !! | CTGAAATTCAAAACATTAAT+GGG | + | chr2_3:10135858-10135877 | Msa0277550:intron | 20.0% |
| !!! | TAATACTTTAATTTAGTCGA+TGG | + | chr2_3:10136130-10136149 | Msa0277550:intron | 20.0% |
| !! | TAATTGTACACTTCATTATA+TGG | + | chr2_3:10136173-10136192 | Msa0277550:intron | 20.0% |
| !! | CATTTGAATAAAATTAGTGT+TGG | - | chr2_3:10136586-10136605 | None:intergenic | 20.0% |
| !!! | AATCATTCTAAAAGCATTTA+TGG | - | chr2_3:10136894-10136913 | None:intergenic | 20.0% |
| !!! | ATGCTTTTAGAATGATTTTA+TGG | + | chr2_3:10136897-10136916 | Msa0277550:intron | 20.0% |
| !! | AAGATTTTGAATGAGATAGT+TGG | - | chr2_3:10133698-10133717 | None:intergenic | 25.0% |
| ! | AACTATCTCATTCAAAATCT+TGG | + | chr2_3:10133697-10133716 | Msa0277550:CDS | 25.0% |
| ! | ACTATCTCATTCAAAATCTT+GGG | + | chr2_3:10133698-10133717 | Msa0277550:CDS | 25.0% |
| ! | CATGTGATTTGAATAATGAA+AGG | - | chr2_3:10133795-10133814 | None:intergenic | 25.0% |
| ! | CTTTCATTATTCAAATCACA+TGG | + | chr2_3:10133793-10133812 | Msa0277550:intron | 25.0% |
| !! | GATCTAAAGAGAGAATTTTT+GGG | - | chr2_3:10133858-10133877 | None:intergenic | 25.0% |
| !! | AAGCTTTTATAAAAGATAGC+AGG | - | chr2_3:10133967-10133986 | None:intergenic | 25.0% |
| !! | TGCTATCTTTTATAAAAGCT+TGG | + | chr2_3:10133966-10133985 | Msa0277550:CDS | 25.0% |
| !!! | TCCTTATTTTGTTTCGAAAT+TGG | + | chr2_3:10134148-10134167 | Msa0277550:intron | 25.0% |
| ! | ACCAATTTCGAAACAAAATA+AGG | - | chr2_3:10134152-10134171 | None:intergenic | 25.0% |
| !!! | ACAATGAAAACAGTTGTTTT+GGG | - | chr2_3:10134246-10134265 | None:intergenic | 25.0% |
| !! | AACAATGAAAACAGTTGTTT+TGG | - | chr2_3:10134247-10134266 | None:intergenic | 25.0% |
| !! | ATAAAAAAATCCTTTGGGAA+AGG | + | chr2_3:10134286-10134305 | Msa0277550:intron | 25.0% |
| ! | AGATTGATGTGTATAAGAAA+TGG | + | chr2_3:10134310-10134329 | Msa0277550:intron | 25.0% |
| ! | GATTGATGTGTATAAGAAAT+GGG | + | chr2_3:10134311-10134330 | Msa0277550:intron | 25.0% |
| ! | ATTGATGTGTATAAGAAATG+GGG | + | chr2_3:10134312-10134331 | Msa0277550:intron | 25.0% |
| !!! | GAAATTTTTTGTTGATCACA+TGG | + | chr2_3:10134419-10134438 | Msa0277550:intron | 25.0% |
| ! | TTGAAATTTCTTGAGTCTAA+AGG | + | chr2_3:10134525-10134544 | Msa0277550:intron | 25.0% |
| ! | TTTGATTAAGGATGCTAAAT+TGG | + | chr2_3:10134548-10134567 | Msa0277550:intron | 25.0% |
| ! | AAAACAAACACTCAGAAATT+TGG | - | chr2_3:10134584-10134603 | None:intergenic | 25.0% |
| ! | AGAAAAAAGATGTTTCCAAT+AGG | + | chr2_3:10134664-10134683 | Msa0277550:intron | 25.0% |
| !!! | ATCTTTTTTCAACATCCTAT+TGG | - | chr2_3:10134682-10134701 | None:intergenic | 25.0% |
| ! | AATCAATGAAGGAATCTTAT+AGG | - | chr2_3:10134927-10134946 | None:intergenic | 25.0% |
| !! | AAGATTCCTTCATTGATTAA+AGG | + | chr2_3:10134929-10134948 | Msa0277550:intron | 25.0% |
| !! | AGATTCCTTCATTGATTAAA+GGG | + | chr2_3:10134930-10134949 | Msa0277550:intron | 25.0% |
| ! | AATATGGGTGAAAAATTCTA+AGG | + | chr2_3:10135146-10135165 | Msa0277550:intron | 25.0% |
| !!! | TGAAAAATTCTAAGGTCTTT+TGG | + | chr2_3:10135154-10135173 | Msa0277550:intron | 25.0% |
| !!! | GAGTTATTTATTTTGGTATG+CGG | + | chr2_3:10135218-10135237 | Msa0277550:intron | 25.0% |
| ! | GGTGATATCTCTATAAAATA+AGG | + | chr2_3:10135239-10135258 | Msa0277550:intron | 25.0% |
| !! | GTATAATACAATTTTGCTTG+TGG | + | chr2_3:10135333-10135352 | Msa0277550:intron | 25.0% |
| ! | ATATGTCTTAGAGTTGAATA+AGG | + | chr2_3:10135544-10135563 | Msa0277550:intron | 25.0% |
| ! | TATGTCTTAGAGTTGAATAA+GGG | + | chr2_3:10135545-10135564 | Msa0277550:intron | 25.0% |
| !!! | CCATTAATGTTTTGAATTTC+AGG | - | chr2_3:10135860-10135879 | None:intergenic | 25.0% |
| ! | CCTGAAATTCAAAACATTAA+TGG | + | chr2_3:10135857-10135876 | Msa0277550:intron | 25.0% |
| ! | AAATTCAAAACATTAATGGG+TGG | + | chr2_3:10135861-10135880 | Msa0277550:intron | 25.0% |
| !! | TATTTTTCCTTATTAGTCGA+TGG | + | chr2_3:10136074-10136093 | Msa0277550:intron | 25.0% |
| ! | TACCATAGAAAATAGGAATT+AGG | + | chr2_3:10136632-10136651 | Msa0277550:intron | 25.0% |
| !! | AACCTAATTCCTATTTTCTA+TGG | - | chr2_3:10136637-10136656 | None:intergenic | 25.0% |
| ! | TTGTTGAGGTTAAACATATA+TGG | + | chr2_3:10136774-10136793 | Msa0277550:intron | 25.0% |
| !! | AACATATATGGAGTTTGTTT+AGG | + | chr2_3:10136786-10136805 | Msa0277550:intron | 25.0% |
| ! | AGCAAATATGTATTACTTAC+AGG | + | chr2_3:10137152-10137171 | Msa0277550:intron | 25.0% |
| ! | ATATAAACTCAATCTAACTG+TGG | + | chr2_3:10137281-10137300 | Msa0277550:intron | 25.0% |
| ! | TAGAAGAACACAAGAAAAAA+GGG | - | chr2_3:10137736-10137755 | None:intergenic | 25.0% |
| AAACTGAATGTGAGGTTATT+GGG | - | chr2_3:10133586-10133605 | None:intergenic | 30.0% | |
| ! | TGAAGATTGTGTTACTGTTA+GGG | - | chr2_3:10133614-10133633 | None:intergenic | 30.0% |
| ! | ATGAAGATTGTGTTACTGTT+AGG | - | chr2_3:10133615-10133634 | None:intergenic | 30.0% |
| ! | TTGAATTTTGTTGGAGAGTT+TGG | - | chr2_3:10133743-10133762 | None:intergenic | 30.0% |
| ! | GGATCTAAAGAGAGAATTTT+TGG | - | chr2_3:10133859-10133878 | None:intergenic | 30.0% |
| !!! | TTGGGAAGAATGGTTTTATT+GGG | - | chr2_3:10133880-10133899 | None:intergenic | 30.0% |
| !!! | TTTGGGAAGAATGGTTTTAT+TGG | - | chr2_3:10133881-10133900 | None:intergenic | 30.0% |
| AAAATTGAGTTTGGGAAGAA+TGG | - | chr2_3:10133890-10133909 | None:intergenic | 30.0% | |
| GAGAGAAGAAAATTGAGTTT+GGG | - | chr2_3:10133898-10133917 | None:intergenic | 30.0% | |
| TGAGAGAAGAAAATTGAGTT+TGG | - | chr2_3:10133899-10133918 | None:intergenic | 30.0% | |
| ! | ACTCAATTTTCTTCTCTCAA+AGG | + | chr2_3:10133900-10133919 | Msa0277550:CDS | 30.0% |
| ! | CTCAATTTTCTTCTCTCAAA+GGG | + | chr2_3:10133901-10133920 | Msa0277550:CDS | 30.0% |
| ATAAAAGATAGCAGGATTTC+TGG | - | chr2_3:10133959-10133978 | None:intergenic | 30.0% | |
| ATTCAAATCCTGCTTCAAAA+TGG | + | chr2_3:10134108-10134127 | Msa0277550:intron | 30.0% | |
| TTCAAATCCTGCTTCAAAAT+GGG | + | chr2_3:10134109-10134128 | Msa0277550:intron | 30.0% | |
| AAAATAAGGACTTTAGACTC+AGG | - | chr2_3:10134138-10134157 | None:intergenic | 30.0% | |
| TTGGTGGAAGTAAATGAATT+AGG | + | chr2_3:10134213-10134232 | Msa0277550:intron | 30.0% | |
| !! | CAATGAAAACAGTTGTTTTG+GGG | - | chr2_3:10134245-10134264 | None:intergenic | 30.0% |
| ! | TTTTTGTTGATCACATGGAT+TGG | + | chr2_3:10134424-10134443 | Msa0277550:intron | 30.0% |
| AATTTCAAGACAAAAGCTCT+AGG | - | chr2_3:10134513-10134532 | None:intergenic | 30.0% | |
| TGAGTCTAAAGGTTTGATTA+AGG | + | chr2_3:10134536-10134555 | Msa0277550:intron | 30.0% | |
| AAACACTCAGAAATTTGGAA+AGG | - | chr2_3:10134579-10134598 | None:intergenic | 30.0% | |
| AATCTGAGAAGTTACATCAA+GGG | + | chr2_3:10134727-10134746 | Msa0277550:intron | 30.0% | |
| !!! | TAGAAGCTTGTTTTGAAGAT+AGG | + | chr2_3:10134801-10134820 | Msa0277550:intron | 30.0% |
| !!! | TCTCACATCTGTGATTTTTT+GGG | + | chr2_3:10134842-10134861 | Msa0277550:intron | 30.0% |
| ! | GTTTTCCCTTTAATCAATGA+AGG | - | chr2_3:10134938-10134957 | None:intergenic | 30.0% |
| ACAAGTAATCCTAGTCTAAA+TGG | - | chr2_3:10134966-10134985 | None:intergenic | 30.0% | |
| TCTTGACAAAATGATACACA+TGG | - | chr2_3:10135079-10135098 | None:intergenic | 30.0% | |
| ! | CACCAGAGCATTTAAAATAT+GGG | + | chr2_3:10135131-10135150 | Msa0277550:intron | 30.0% |
| !!! | AAATTCTAAGGTCTTTTGGA+TGG | + | chr2_3:10135158-10135177 | Msa0277550:intron | 30.0% |
| TCTCTATAAAATAAGGTCGT+TGG | + | chr2_3:10135246-10135265 | Msa0277550:intron | 30.0% | |
| AATTTCTGTCAAACCGAAAA+GGG | - | chr2_3:10135480-10135499 | None:intergenic | 30.0% | |
| AAATTTCTGTCAAACCGAAA+AGG | - | chr2_3:10135481-10135500 | None:intergenic | 30.0% | |
| !! | TTTTCGGTTTGACAGAAATT+TGG | + | chr2_3:10135480-10135499 | Msa0277550:intron | 30.0% |
| ATGTCTTAGAGTTGAATAAG+GGG | + | chr2_3:10135546-10135565 | Msa0277550:intron | 30.0% | |
| ATTGTTATGTGTTCCTTACA+TGG | + | chr2_3:10135714-10135733 | Msa0277550:intron | 30.0% | |
| TTGTTATGTGTTCCTTACAT+GGG | + | chr2_3:10135715-10135734 | Msa0277550:intron | 30.0% | |
| ACTCAACTTGATATTTGAGT+AGG | - | chr2_3:10135799-10135818 | None:intergenic | 30.0% | |
| !! | ACTCAAATATCAAGTTGAGT+TGG | + | chr2_3:10135799-10135818 | Msa0277550:intron | 30.0% |
| ! | GTTGTTTACAATTCTAGAGA+TGG | + | chr2_3:10135821-10135840 | Msa0277550:intron | 30.0% |
| AATGTGATATCAAACTTTCC+TGG | - | chr2_3:10135904-10135923 | None:intergenic | 30.0% | |
| GTTTATAAAGAACTCACTAC+TGG | + | chr2_3:10135985-10136004 | Msa0277550:intron | 30.0% | |
| TAAAGTAACCAGCAAACATA+AGG | - | chr2_3:10136049-10136068 | None:intergenic | 30.0% | |
| ! | ACATATTCCATCGACTAATA+AGG | - | chr2_3:10136084-10136103 | None:intergenic | 30.0% |
| ACACTTCATTATATGGTTAG+CGG | + | chr2_3:10136180-10136199 | Msa0277550:intron | 30.0% | |
| GAATCACAATTCTTTGCATT+TGG | - | chr2_3:10136368-10136387 | None:intergenic | 30.0% | |
| !! | TATCGCTGTTTTCTATACTT+AGG | + | chr2_3:10136487-10136506 | Msa0277550:intron | 30.0% |
| CTCATAAAGGGTTCAAAATT+TGG | - | chr2_3:10136544-10136563 | None:intergenic | 30.0% | |
| ! | CAAATTTTGAACCCTTTATG+AGG | + | chr2_3:10136542-10136561 | Msa0277550:intron | 30.0% |
| AATCATATGCTGATAGAATG+AGG | - | chr2_3:10136957-10136976 | None:intergenic | 30.0% | |
| ATATGCATGAGGAATTAACA+TGG | - | chr2_3:10137056-10137075 | None:intergenic | 30.0% | |
| GTTTCTCAGAAAAGATGTAT+CGG | + | chr2_3:10137311-10137330 | Msa0277550:intron | 30.0% | |
| AGCCATTTACTGATCAAATA+AGG | + | chr2_3:10137421-10137440 | Msa0277550:intron | 30.0% | |
| ! | CACCTTATTTGATCAGTAAA+TGG | - | chr2_3:10137426-10137445 | None:intergenic | 30.0% |
| !!! | TTGTTTTTGCAGTTCTGTTT+TGG | + | chr2_3:10137682-10137701 | Msa0277550:intron | 30.0% |
| GTAGAAGAACACAAGAAAAA+AGG | - | chr2_3:10137737-10137756 | None:intergenic | 30.0% | |
| AACTGAATGTGAGGTTATTG+GGG | - | chr2_3:10133585-10133604 | None:intergenic | 35.0% | |
| GAAACTGAATGTGAGGTTAT+TGG | - | chr2_3:10133587-10133606 | None:intergenic | 35.0% | |
| AAGATGAAGAAGAAAAGGGT+TGG | - | chr2_3:10133654-10133673 | None:intergenic | 35.0% | |
| TGGGAAGATGAAGAAGAAAA+GGG | - | chr2_3:10133658-10133677 | None:intergenic | 35.0% | |
| TTGGGAAGATGAAGAAGAAA+AGG | - | chr2_3:10133659-10133678 | None:intergenic | 35.0% | |
| !! | GGTTGTGAAAGTGTGATTTT+GGG | - | chr2_3:10133677-10133696 | None:intergenic | 35.0% |
| !! | TGGTTGTGAAAGTGTGATTT+TGG | - | chr2_3:10133678-10133697 | None:intergenic | 35.0% |
| !!! | GTCGTTGAGTTGAATTTTGT+TGG | - | chr2_3:10133752-10133771 | None:intergenic | 35.0% |
| AATAATGAAAGGACTGAGTC+TGG | - | chr2_3:10133784-10133803 | None:intergenic | 35.0% | |
| !! | TTTGATGAGAGTTGATAGCT+GGG | - | chr2_3:10133830-10133849 | None:intergenic | 35.0% |
| !!! | TTTTGATGAGAGTTGATAGC+TGG | - | chr2_3:10133831-10133850 | None:intergenic | 35.0% |
| ! | TTCTGGTGATGATTTGAACA+AGG | - | chr2_3:10133942-10133961 | None:intergenic | 35.0% |
| TCAAATCCTGCTTCAAAATG+GGG | + | chr2_3:10134110-10134129 | Msa0277550:intron | 35.0% | |
| AATGCCTTCTCAAATCTTGA+AGG | - | chr2_3:10134195-10134214 | None:intergenic | 35.0% | |
| ! | TTCAAGATTTGAGAAGGCAT+TGG | + | chr2_3:10134194-10134213 | Msa0277550:intron | 35.0% |
| ATGTGTATAAGAAATGGGGT+TGG | + | chr2_3:10134316-10134335 | Msa0277550:intron | 35.0% | |
| !!! | CAGCATTTTTGAAGTATCCA+TGG | + | chr2_3:10134358-10134377 | Msa0277550:intron | 35.0% |
| !! | GACTCAGCAAAAGAAGTATT+GGG | - | chr2_3:10134473-10134492 | None:intergenic | 35.0% |
| ! | AGACTCAGCAAAAGAAGTAT+TGG | - | chr2_3:10134474-10134493 | None:intergenic | 35.0% |
| ! | TTTTGCTGAGTCTTGAGAAA+AGG | + | chr2_3:10134481-10134500 | Msa0277550:intron | 35.0% |
| TTTGCTGAGTCTTGAGAAAA+GGG | + | chr2_3:10134482-10134501 | Msa0277550:intron | 35.0% | |
| ATTAAGGATGCTAAATTGGC+TGG | + | chr2_3:10134552-10134571 | Msa0277550:intron | 35.0% | |
| ! | AAGATTTTAAGCCGTGAGAT+TGG | + | chr2_3:10134697-10134716 | Msa0277550:intron | 35.0% |
| CAATCTGAGAAGTTACATCA+AGG | + | chr2_3:10134726-10134745 | Msa0277550:intron | 35.0% | |
| !!! | GTCTCACATCTGTGATTTTT+TGG | + | chr2_3:10134841-10134860 | Msa0277550:intron | 35.0% |
| !!! | CTCACATCTGTGATTTTTTG+GGG | + | chr2_3:10134843-10134862 | Msa0277550:intron | 35.0% |
| !!! | TCACATCTGTGATTTTTTGG+GGG | + | chr2_3:10134844-10134863 | Msa0277550:intron | 35.0% |
| AAACCACAACCATTTAGACT+AGG | + | chr2_3:10134954-10134973 | Msa0277550:intron | 35.0% | |
| AATCCTAGTCTAAATGGTTG+TGG | - | chr2_3:10134960-10134979 | None:intergenic | 35.0% | |
| AATAGGCAAAAGATGGAAGA+CGG | - | chr2_3:10135046-10135065 | None:intergenic | 35.0% | |
| TGCAACAAATAGGCAAAAGA+TGG | - | chr2_3:10135053-10135072 | None:intergenic | 35.0% | |
| CACATGGATATGCAACAAAT+AGG | - | chr2_3:10135063-10135082 | None:intergenic | 35.0% | |
| ! | GGATTTATTGCTCCATGTTT+TGG | - | chr2_3:10135112-10135131 | None:intergenic | 35.0% |
| !! | CCATATTTTAAATGCTCTGG+TGG | - | chr2_3:10135133-10135152 | None:intergenic | 35.0% |
| ! | CCACCAGAGCATTTAAAATA+TGG | + | chr2_3:10135130-10135149 | Msa0277550:intron | 35.0% |
| !! | CACCCATATTTTAAATGCTC+TGG | - | chr2_3:10135136-10135155 | None:intergenic | 35.0% |
| !! | ATCTTGATTTGGAGTGTTGA+GGG | + | chr2_3:10135606-10135625 | Msa0277550:intron | 35.0% |
| GTGATACTTCTTCAGATGTT+TGG | + | chr2_3:10135653-10135672 | Msa0277550:intron | 35.0% | |
| ! | TTCAGATGTTTGGCTTATGA+AGG | + | chr2_3:10135663-10135682 | Msa0277550:intron | 35.0% |
| ! | GTTTGGCTTATGAAGGAATA+TGG | + | chr2_3:10135670-10135689 | Msa0277550:intron | 35.0% |
| TTGATATTTGAGTAGGCACT+TGG | - | chr2_3:10135792-10135811 | None:intergenic | 35.0% | |
| ! | TCAAAACATTAATGGGTGGA+TGG | + | chr2_3:10135865-10135884 | Msa0277550:intron | 35.0% |
| TTATAAACCTCATGCACAAG+TGG | - | chr2_3:10135973-10135992 | None:intergenic | 35.0% | |
| TAACATACAAGTTGCAGCTA+GGG | - | chr2_3:10136022-10136041 | None:intergenic | 35.0% | |
| TTAACATACAAGTTGCAGCT+AGG | - | chr2_3:10136023-10136042 | None:intergenic | 35.0% | |
| !!! | GTCGATGGATAGTTTTTTGT+TGG | + | chr2_3:10136145-10136164 | Msa0277550:intron | 35.0% |
| TCATTATATGGTTAGCGGTT+TGG | + | chr2_3:10136185-10136204 | Msa0277550:intron | 35.0% | |
| !! | GAATTAGGTTTTATGCCCTT+TGG | + | chr2_3:10136207-10136226 | Msa0277550:intron | 35.0% |
| CTCGTGATACCATAGAAAAT+AGG | + | chr2_3:10136625-10136644 | Msa0277550:intron | 35.0% | |
| ! | TATATGGAGTTTGTTTAGGC+TGG | + | chr2_3:10136790-10136809 | Msa0277550:intron | 35.0% |
| !! | TAAAAGCATTTATGGAGACC+AGG | - | chr2_3:10136886-10136905 | None:intergenic | 35.0% |
| GTGTTTGAGAAATATGCATG+AGG | - | chr2_3:10137067-10137086 | None:intergenic | 35.0% | |
| AGTGTAAGAGTTCTACGTAT+TGG | - | chr2_3:10137223-10137242 | None:intergenic | 35.0% | |
| ! | GGGTTTTTACATAAGGATCA+TGG | - | chr2_3:10137385-10137404 | None:intergenic | 35.0% |
| !! | CAGGGGCTTCTTTAAAATTT+CGG | + | chr2_3:10137648-10137667 | Msa0277550:intron | 35.0% |
| !!! | GGGTTTTGAAACTGAATGTG+AGG | - | chr2_3:10133594-10133613 | None:intergenic | 40.0% |
| GAAGCCTTCAAGATTTGAGA+AGG | + | chr2_3:10134188-10134207 | Msa0277550:intron | 40.0% | |
| !! | AAGATTTGAGAAGGCATTGG+TGG | + | chr2_3:10134197-10134216 | Msa0277550:intron | 40.0% |
| CATCAATCTTCCTTTCCCAA+AGG | - | chr2_3:10134299-10134318 | None:intergenic | 40.0% | |
| ! | GAAGTATCCATGGTGTATGT+TGG | + | chr2_3:10134368-10134387 | Msa0277550:intron | 40.0% |
| GGCATCTGTTCGTAAAATTG+AGG | + | chr2_3:10134389-10134408 | Msa0277550:intron | 40.0% | |
| GAAGTTTGTGTATTGCTTCG+AGG | + | chr2_3:10134608-10134627 | Msa0277550:intron | 40.0% | |
| TCAAATCCAGTAGATGACCA+TGG | - | chr2_3:10134767-10134786 | None:intergenic | 40.0% | |
| TGGTCATCTACTGGATTTGA+TGG | + | chr2_3:10134767-10134786 | Msa0277550:intron | 40.0% | |
| ATAGGCAAAAGATGGAAGAC+GGG | - | chr2_3:10135045-10135064 | None:intergenic | 40.0% | |
| GAGTCTTGCTTACCAAAACA+TGG | + | chr2_3:10135097-10135116 | Msa0277550:intron | 40.0% | |
| !! | CATTGTTTCTAACTCCCAGT+TGG | + | chr2_3:10135375-10135394 | Msa0277550:intron | 40.0% |
| TATATGAAGTCACACACCAC+CGG | - | chr2_3:10135420-10135439 | None:intergenic | 40.0% | |
| ! | AGTTTGTGTACTGCCCTTTT+CGG | + | chr2_3:10135464-10135483 | Msa0277550:intron | 40.0% |
| !! | CATCTTGATTTGGAGTGTTG+AGG | + | chr2_3:10135605-10135624 | Msa0277550:intron | 40.0% |
| TTCCTTACATGGGAGATGTT+GGG | + | chr2_3:10135725-10135744 | Msa0277550:intron | 40.0% | |
| TGGGTCGTATCTTTATACCA+AGG | + | chr2_3:10135744-10135763 | Msa0277550:intron | 40.0% | |
| ! | CTCAGTAAGATAAAGTGCCT+TGG | - | chr2_3:10135764-10135783 | None:intergenic | 40.0% |
| ! | CAAGGCACTTTATCTTACTG+AGG | + | chr2_3:10135762-10135781 | Msa0277550:intron | 40.0% |
| AACTTTCCTGGTAGACTTCA+GGG | - | chr2_3:10135892-10135911 | None:intergenic | 40.0% | |
| AAACTTTCCTGGTAGACTTC+AGG | - | chr2_3:10135893-10135912 | None:intergenic | 40.0% | |
| GTTAAGTGCCTTATGTTTGC+TGG | + | chr2_3:10136038-10136057 | Msa0277550:intron | 40.0% | |
| ! | ATGGTTAGCGGTTTGGAATT+AGG | + | chr2_3:10136192-10136211 | Msa0277550:intron | 40.0% |
| ACACAAAAGTGACAGCCAAA+GGG | - | chr2_3:10136225-10136244 | None:intergenic | 40.0% | |
| TACACAAAAGTGACAGCCAA+AGG | - | chr2_3:10136226-10136245 | None:intergenic | 40.0% | |
| ACATATAACCGTTGCGATGA+CGG | - | chr2_3:10136420-10136439 | None:intergenic | 40.0% | |
| ATTGTGTGACAGAGAAAGTG+TGG | - | chr2_3:10136445-10136464 | None:intergenic | 40.0% | |
| !! | GCTGTTTTCTATACTTAGGC+TGG | + | chr2_3:10136491-10136510 | Msa0277550:intron | 40.0% |
| GGCTGGATCTCATTGTTTAA+TGG | + | chr2_3:10136508-10136527 | Msa0277550:intron | 40.0% | |
| ACCTAGCACTTCCTCATAAA+GGG | - | chr2_3:10136556-10136575 | None:intergenic | 40.0% | |
| AACCTAGCACTTCCTCATAA+AGG | - | chr2_3:10136557-10136576 | None:intergenic | 40.0% | |
| TCCAGTTGCACAGAGATTTA+GGG | - | chr2_3:10136752-10136771 | None:intergenic | 40.0% | |
| CTTGAATGCTGTCTCTTGAT+TGG | + | chr2_3:10136852-10136871 | Msa0277550:intron | 40.0% | |
| CAGAGACAAGCATGTTTCTT+TGG | + | chr2_3:10136980-10136999 | Msa0277550:intron | 40.0% | |
| ! | GTTGTATTTTCAGCTCTCCT+TGG | + | chr2_3:10137023-10137042 | Msa0277550:intron | 40.0% |
| ATTAACATGGAGATCGACCA+AGG | - | chr2_3:10137043-10137062 | None:intergenic | 40.0% | |
| TCACATACGTTCCAACTTGA+GGG | - | chr2_3:10137247-10137266 | None:intergenic | 40.0% | |
| !! | ATAAGGTGTCGAAGACTTGT+TGG | + | chr2_3:10137438-10137457 | Msa0277550:intron | 40.0% |
| TGAAACTCCACAATGAATCC+AGG | - | chr2_3:10137529-10137548 | None:intergenic | 40.0% | |
| GGATTCATTGTGGAGTTTCA+CGG | + | chr2_3:10137529-10137548 | Msa0277550:intron | 40.0% | |
| !! | TAAACAGAAGTGCTACAGCA+GGG | - | chr2_3:10137625-10137644 | None:intergenic | 40.0% |
| !! | CGAAATTTTAAAGAAGCCCC+TGG | - | chr2_3:10137650-10137669 | None:intergenic | 40.0% |
| !! | GGGCTTCTTTAAAATTTCGG+AGG | + | chr2_3:10137651-10137670 | Msa0277550:intron | 40.0% |
| !!! | ACACTTGATTTTGGAGCACA+AGG | - | chr2_3:10137805-10137824 | None:intergenic | 40.0% |
| GAGAGTTTGGAAGCAGTTTC+TGG | - | chr2_3:10133730-10133749 | None:intergenic | 45.0% | |
| !! | GCAGTTTTTGAGAGATGCGA+TGG | - | chr2_3:10134052-10134071 | None:intergenic | 45.0% |
| ACAGATGCCAACATACACCA+TGG | - | chr2_3:10134378-10134397 | None:intergenic | 45.0% | |
| ! | GGGTGTTTTGCAAGCACAAT+AGG | - | chr2_3:10134453-10134472 | None:intergenic | 45.0% |
| GATTGTGATCGCCAATCTCA+CGG | - | chr2_3:10134711-10134730 | None:intergenic | 45.0% | |
| AGATAGGACTCGTATGCAAG+TGG | + | chr2_3:10134817-10134836 | Msa0277550:intron | 45.0% | |
| ! | TGTTTCTAACTCCCAGTTGG+CGG | + | chr2_3:10135378-10135397 | Msa0277550:intron | 45.0% |
| AAACCTATAAGCAGCCAGTG+AGG | - | chr2_3:10135516-10135535 | None:intergenic | 45.0% | |
| ! | TCACTGGCTGCTTATAGGTT+TGG | + | chr2_3:10135515-10135534 | Msa0277550:intron | 45.0% |
| AGTTGAATAAGGGGCAGAAG+AGG | + | chr2_3:10135555-10135574 | Msa0277550:intron | 45.0% | |
| GTTCCTTACATGGGAGATGT+TGG | + | chr2_3:10135724-10135743 | Msa0277550:intron | 45.0% | |
| ! | TGTTATGCCACTTGTGCATG+AGG | + | chr2_3:10135963-10135982 | Msa0277550:intron | 45.0% |
| TGAAGCAACATGAAGCTTCG+TGG | + | chr2_3:10136316-10136335 | Msa0277550:intron | 45.0% | |
| !! | ACCCTTTATGAGGAAGTGCT+AGG | + | chr2_3:10136552-10136571 | Msa0277550:intron | 45.0% |
| !! | GTGTTGACTGCTTGAATGAG+TGG | + | chr2_3:10136674-10136693 | Msa0277550:intron | 45.0% |
| TCCCTAAATCTCTGTGCAAC+TGG | + | chr2_3:10136748-10136767 | Msa0277550:intron | 45.0% | |
| CTCCAGTTGCACAGAGATTT+AGG | - | chr2_3:10136753-10136772 | None:intergenic | 45.0% | |
| !! | TGTGCAACTGGAGTTTGTTG+AGG | + | chr2_3:10136760-10136779 | Msa0277550:intron | 45.0% |
| !! | TCTTGATTGGAAAGTGCTCC+TGG | + | chr2_3:10136865-10136884 | Msa0277550:intron | 45.0% |
| CTCTTACACTACCCTCAAGT+TGG | + | chr2_3:10137233-10137252 | Msa0277550:intron | 45.0% | |
| CTCACATACGTTCCAACTTG+AGG | - | chr2_3:10137248-10137267 | None:intergenic | 45.0% | |
| AGATGTATCGGACATTCTCG+AGG | + | chr2_3:10137323-10137342 | Msa0277550:intron | 45.0% | |
| GATGTATCGGACATTCTCGA+GGG | + | chr2_3:10137324-10137343 | Msa0277550:intron | 45.0% | |
| ! | CAGGGAGGGGTTTTTACATA+AGG | - | chr2_3:10137392-10137411 | None:intergenic | 45.0% |
| TAAATGGCTCCTCCTGTACA+GGG | - | chr2_3:10137410-10137429 | None:intergenic | 45.0% | |
| GCAAAGAAGCAGGAGGAAAA+AGG | - | chr2_3:10137559-10137578 | None:intergenic | 45.0% | |
| !! | AAACAGAAGTGCTACAGCAG+GGG | - | chr2_3:10137624-10137643 | None:intergenic | 45.0% |
| !! | CTAAACAGAAGTGCTACAGC+AGG | - | chr2_3:10137626-10137645 | None:intergenic | 45.0% |
| CTGCTGTAGCACTTCTGTTT+AGG | + | chr2_3:10137624-10137643 | Msa0277550:intron | 45.0% | |
| TAGCACTTCTGTTTAGGCCA+GGG | + | chr2_3:10137630-10137649 | Msa0277550:intron | 45.0% | |
| !!! | CAGGAACCCCATTTTGAAGC+AGG | - | chr2_3:10134119-10134138 | None:intergenic | 50.0% |
| ACACGACCATGGTCATCTAC+TGG | + | chr2_3:10134758-10134777 | Msa0277550:intron | 50.0% | |
| CAGAAGGATTACCGCCAACT+GGG | - | chr2_3:10135392-10135411 | None:intergenic | 50.0% | |
| TCAGAAGGATTACCGCCAAC+TGG | - | chr2_3:10135393-10135412 | None:intergenic | 50.0% | |
| AGTTGGCGGTAATCCTTCTG+AGG | + | chr2_3:10135392-10135411 | Msa0277550:intron | 50.0% | |
| ! | CGGTAATCCTTCTGAGGATC+CGG | + | chr2_3:10135398-10135417 | Msa0277550:intron | 50.0% |
| ! | TAATCCTTCTGAGGATCCGG+TGG | + | chr2_3:10135401-10135420 | Msa0277550:intron | 50.0% |
| TTGGTTAACACCAGCCTCAC+TGG | + | chr2_3:10135499-10135518 | Msa0277550:intron | 50.0% | |
| GACCCAACATCTCCCATGTA+AGG | - | chr2_3:10135730-10135749 | None:intergenic | 50.0% | |
| !! | ATAACCGTTGCGATGACGGA+TGG | - | chr2_3:10136416-10136435 | None:intergenic | 50.0% |
| GTAAAAACCCCTCCCTGTAC+AGG | + | chr2_3:10137395-10137414 | Msa0277550:intron | 50.0% | |
| GTAAATGGCTCCTCCTGTAC+AGG | - | chr2_3:10137411-10137430 | None:intergenic | 50.0% | |
| AAGAGCAGCAAAGAAGCAGG+AGG | - | chr2_3:10137566-10137585 | None:intergenic | 50.0% | |
| ACGAAGAGCAGCAAAGAAGC+AGG | - | chr2_3:10137569-10137588 | None:intergenic | 50.0% | |
| GGGAAAATACCAGCAGAGAG+CGG | - | chr2_3:10137604-10137623 | None:intergenic | 50.0% | |
| GTAGCACTTCTGTTTAGGCC+AGG | + | chr2_3:10137629-10137648 | Msa0277550:intron | 50.0% | |
| AGCACTTCTGTTTAGGCCAG+GGG | + | chr2_3:10137631-10137650 | Msa0277550:intron | 50.0% | |
| !! | TTTGGAGCACAAGGAGTACC+CGG | - | chr2_3:10137796-10137815 | None:intergenic | 50.0% |
| CTATAAGCAGCCAGTGAGGC+TGG | - | chr2_3:10135512-10135531 | None:intergenic | 55.0% | |
| ! | CAGCCTCACTGGCTGCTTAT+AGG | + | chr2_3:10135510-10135529 | Msa0277550:intron | 55.0% |
| GATGGTCCCTGAAGTCTACC+AGG | + | chr2_3:10135883-10135902 | Msa0277550:intron | 55.0% | |
| TGCTCAAAACCGCGTGTTGC+TGG | + | chr2_3:10136287-10136306 | Msa0277550:intron | 55.0% | |
| ! | GCTCAAAACCGCGTGTTGCT+GGG | + | chr2_3:10136288-10136307 | Msa0277550:intron | 55.0% |
| TCAGACATCCCAGCAACACG+CGG | - | chr2_3:10136299-10136318 | None:intergenic | 55.0% | |
| TCCACCATCCGTCATCGCAA+CGG | + | chr2_3:10136409-10136428 | Msa0277550:intron | 55.0% | |
| AAAACCCCTCCCTGTACAGG+AGG | + | chr2_3:10137398-10137417 | Msa0277550:intron | 55.0% | |
| TTGCTGCGACTCTTTCCGAG+CGG | + | chr2_3:10137502-10137521 | Msa0277550:intron | 55.0% | |
| ACAATGAATCCAGGCCCGCT+CGG | - | chr2_3:10137520-10137539 | None:intergenic | 55.0% | |
| TGCAGCCTTTGTGTCGTCCT+CGG | + | chr2_3:10137763-10137782 | Msa0277550:CDS | 55.0% | |
| ACAAGCCGAGGACGACACAA+AGG | - | chr2_3:10137771-10137790 | None:intergenic | 55.0% | |
| ! | TGTCGTCCTCGGCTTGTTTC+CGG | + | chr2_3:10137774-10137793 | Msa0277550:CDS | 55.0% |
| CACACCACCGGATCCTCAGA+AGG | - | chr2_3:10135408-10135427 | None:intergenic | 60.0% | |
| !! | GTTGCGATGACGGATGGTGG+AGG | - | chr2_3:10136410-10136429 | None:intergenic | 60.0% |
| !! | ACCGTTGCGATGACGGATGG+TGG | - | chr2_3:10136413-10136432 | None:intergenic | 60.0% |
| TGGCTCCTCCTGTACAGGGA+GGG | - | chr2_3:10137406-10137425 | None:intergenic | 60.0% | |
| ATGGCTCCTCCTGTACAGGG+AGG | - | chr2_3:10137407-10137426 | None:intergenic | 60.0% | |
| TGCTGCGACTCTTTCCGAGC+GGG | + | chr2_3:10137503-10137522 | Msa0277550:intron | 60.0% | |
| GAGCGGGCCTGGATTCATTG+TGG | + | chr2_3:10137519-10137538 | Msa0277550:intron | 60.0% | |
| GCTGCTCTTCGTCATGCTGC+TGG | + | chr2_3:10137577-10137596 | Msa0277550:intron | 60.0% | |
| ! | GTCGTCCTCGGCTTGTTTCC+GGG | + | chr2_3:10137775-10137794 | Msa0277550:CDS | 60.0% |
| GAGTACCCGGAAACAAGCCG+AGG | - | chr2_3:10137783-10137802 | None:intergenic | 60.0% | |
| GGGTCTCTGCGACACGACCA+TGG | + | chr2_3:10134747-10134766 | Msa0277550:intron | 65.0% | |
| GGCTCCTCCTGTACAGGGAG+GGG | - | chr2_3:10137405-10137424 | None:intergenic | 65.0% | |
| CGACTCTTTCCGAGCGGGCC+TGG | + | chr2_3:10137508-10137527 | Msa0277550:intron | 70.0% | |
| GCTGCTGGTCCGCTCTCTGC+TGG | + | chr2_3:10137592-10137611 | Msa0277550:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 10133550 | 10137830 | 10133550 | ID=Msa0277550;Name=Msa0277550 |
| chr2_3 | mRNA | 10133550 | 10137830 | 10133550 | ID=Msa0277550-mRNA-1;Parent=Msa0277550;Name=Msa0277550-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.5|0|0|4|0|185 |
| chr2_3 | exon | 10133550 | 10133789 | 10133550 | ID=Msa0277550-mRNA-1:exon:4549;Parent=Msa0277550-mRNA-1 |
| chr2_3 | exon | 10133832 | 10134075 | 10133832 | ID=Msa0277550-mRNA-1:exon:4550;Parent=Msa0277550-mRNA-1 |
| chr2_3 | exon | 10135394 | 10135399 | 10135394 | ID=Msa0277550-mRNA-1:exon:4551;Parent=Msa0277550-mRNA-1 |
| chr2_3 | exon | 10137763 | 10137830 | 10137763 | ID=Msa0277550-mRNA-1:exon:4552;Parent=Msa0277550-mRNA-1 |
| chr2_3 | CDS | 10133550 | 10133789 | 10133550 | ID=Msa0277550-mRNA-1:cds;Parent=Msa0277550-mRNA-1 |
| chr2_3 | CDS | 10133832 | 10134075 | 10133832 | ID=Msa0277550-mRNA-1:cds;Parent=Msa0277550-mRNA-1 |
| chr2_3 | CDS | 10135394 | 10135399 | 10135394 | ID=Msa0277550-mRNA-1:cds;Parent=Msa0277550-mRNA-1 |
| chr2_3 | CDS | 10137763 | 10137830 | 10137763 | ID=Msa0277550-mRNA-1:cds;Parent=Msa0277550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
