Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237670 | XP_013462703.1 | 92.056 | 428 | 14 | 1 | 1 | 408 | 1 | 428 | 0.0 | 805 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237670 | sp|Q9XQ94|GLNA2_MEDSA | 89.720 | 428 | 24 | 1 | 1 | 408 | 1 | 428 | 0.0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237670 | E1ANG4 | 92.056 | 428 | 14 | 1 | 1 | 408 | 1 | 428 | 0.0 | 805 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0211590 | Msa0237670 | 0.801060 | 1.076099e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237670 | MtrunA17_Chr2g0287181 | 92.056 | 428 | 14 | 1 | 1 | 408 | 1 | 428 | 0.0 | 805 |
| Msa0237670 | MtrunA17_Chr2g0287211 | 89.019 | 428 | 27 | 1 | 1 | 408 | 1 | 428 | 0.0 | 786 |
| Msa0237670 | MtrunA17_Chr6g0479141 | 70.225 | 356 | 86 | 1 | 57 | 392 | 1 | 356 | 0.0 | 541 |
| Msa0237670 | MtrunA17_Chr3g0110261 | 70.506 | 356 | 85 | 1 | 57 | 392 | 1 | 356 | 0.0 | 538 |
| Msa0237670 | MtrunA17_Chr5g0434471 | 67.422 | 353 | 95 | 1 | 60 | 392 | 5 | 357 | 0.0 | 516 |
| Msa0237670 | MtrunA17_Chr8g0364341 | 73.846 | 65 | 17 | 0 | 288 | 352 | 9 | 73 | 7.05e-26 | 99.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237670 | AT5G35630.3 | 74.942 | 431 | 84 | 4 | 1 | 408 | 1 | 430 | 0.0 | 665 |
| Msa0237670 | AT5G35630.2 | 74.942 | 431 | 84 | 4 | 1 | 408 | 1 | 430 | 0.0 | 665 |
| Msa0237670 | AT5G35630.1 | 74.942 | 431 | 84 | 4 | 1 | 408 | 1 | 430 | 0.0 | 665 |
| Msa0237670 | AT5G16570.1 | 71.629 | 356 | 81 | 1 | 57 | 392 | 1 | 356 | 0.0 | 546 |
| Msa0237670 | AT5G37600.1 | 70.787 | 356 | 84 | 1 | 57 | 392 | 1 | 356 | 0.0 | 544 |
| Msa0237670 | AT1G66200.1 | 71.910 | 356 | 80 | 1 | 57 | 392 | 1 | 356 | 0.0 | 541 |
| Msa0237670 | AT1G66200.3 | 70.137 | 365 | 80 | 1 | 57 | 392 | 1 | 365 | 0.0 | 538 |
| Msa0237670 | AT3G17820.1 | 67.705 | 353 | 94 | 1 | 57 | 389 | 1 | 353 | 0.0 | 514 |
| Msa0237670 | AT1G48470.1 | 66.272 | 338 | 94 | 1 | 72 | 389 | 16 | 353 | 1.50e-175 | 494 |
| Msa0237670 | AT1G66200.2 | 69.841 | 252 | 56 | 1 | 57 | 288 | 1 | 252 | 4.23e-128 | 370 |
| Msa0237670 | AT5G16570.2 | 68.201 | 239 | 56 | 1 | 57 | 275 | 1 | 239 | 9.43e-120 | 348 |
Find 121 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAACATGGCACAGATTT+TGG | 0.188436 | 2_2:-10932710 | Msa0237670:exon |
| GGTTGAGGATCTACTTAATT+TGG | 0.214484 | 2_2:-10932527 | Msa0237670:CDS |
| TTGAAGCTGCTGACCATATC+TGG | 0.217821 | 2_2:-10930807 | Msa0237670:CDS |
| AACAATACCTCAATTGGTTT+TGG | 0.237863 | 2_2:+10930480 | None:intergenic |
| ATAAATATAAATAATCTAAA+AGG | 0.299519 | 2_2:+10929561 | None:intergenic |
| ATATGTGGTAACAGCATTAT+TGG | 0.304333 | 2_2:-10929737 | Msa0237670:CDS |
| GGTCTAAATCTATTGATTAA+TGG | 0.315795 | 2_2:-10929644 | Msa0237670:exon |
| AGCTCAGAAGCTTGCATTGA+AGG | 0.328927 | 2_2:-10929665 | Msa0237670:CDS |
| TTCTTATATATGCAGGGAAT+TGG | 0.339641 | 2_2:-10929964 | Msa0237670:intron |
| GGAATTTCAGCCTCAACCTT+TGG | 0.339649 | 2_2:+10931514 | None:intergenic |
| AGCTCAGAGGGATGCTCAAC+AGG | 0.340393 | 2_2:+10931916 | None:intergenic |
| CAGGATGTCATACCAATTAC+AGG | 0.346174 | 2_2:-10930335 | Msa0237670:intron |
| AATAATGCTGTTACCACATA+TGG | 0.356454 | 2_2:+10929739 | None:intergenic |
| GCCCCGGCACCACAGTAATA+AGG | 0.359395 | 2_2:+10931149 | None:intergenic |
| TTAGTGTCGTGTCTGGTGTC+TGG | 0.361232 | 2_2:-10932789 | Msa0237670:five_prime_UTR |
| AGTATTAATATCTTGTTGTC+TGG | 0.361664 | 2_2:-10929538 | Msa0237670:three_prime_UTR |
| TGGCCTGTTGGTGGCTATCC+TGG | 0.366008 | 2_2:-10931280 | Msa0237670:CDS |
| AAGCATAACAATACCTCAAT+TGG | 0.369129 | 2_2:+10930474 | None:intergenic |
| TCGTTGTCTGTGTTAACATA+TGG | 0.369289 | 2_2:-10929449 | Msa0237670:three_prime_UTR |
| GAATTTCAGCCTCAACCTTT+GGG | 0.369895 | 2_2:+10931515 | None:intergenic |
| TTTCACATCTGTTTGAAGTA+AGG | 0.375190 | 2_2:+10931315 | None:intergenic |
| TCAACTCTGGCACCATCAAC+AGG | 0.381942 | 2_2:-10932549 | Msa0237670:CDS |
| ACTAGTAATAATTAAGATAA+TGG | 0.387761 | 2_2:+10932839 | None:intergenic |
| TTGATTAATGGCGTTCTAGA+TGG | 0.391098 | 2_2:-10929632 | Msa0237670:three_prime_UTR |
| CTAAACAGGATTGGTGGAAC+AGG | 0.406866 | 2_2:-10932331 | Msa0237670:intron |
| TACAAGGCTTGTTTATATGC+TGG | 0.409312 | 2_2:-10931089 | Msa0237670:CDS |
| TAGATCCTCAACCCTGTTGA+TGG | 0.410630 | 2_2:+10932537 | None:intergenic |
| GGTCCTTATTACTGTGGTGC+CGG | 0.411618 | 2_2:-10931152 | Msa0237670:CDS |
| GGAAATGAGAGAAGGTTGAC+AGG | 0.416285 | 2_2:-10930113 | Msa0237670:CDS |
| TTTAACCTTGACAGGGTGAC+TGG | 0.422533 | 2_2:-10930365 | Msa0237670:intron |
| GCCGGGGCAGATAAGTCATT+TGG | 0.423725 | 2_2:-10931134 | Msa0237670:CDS |
| CTGACCATATCTGGGCTTCA+AGG | 0.425233 | 2_2:-10930798 | Msa0237670:CDS |
| GTCCTTATTACTGTGGTGCC+GGG | 0.426651 | 2_2:-10931151 | Msa0237670:CDS |
| ACAGATGTGAAATGGCCATT+AGG | 0.428436 | 2_2:-10931304 | Msa0237670:CDS |
| ATGCTCAACAGGCTTTGATA+TGG | 0.434596 | 2_2:+10931927 | None:intergenic |
| GCATAATTGCTGAGTACATC+TGG | 0.436205 | 2_2:-10932483 | Msa0237670:intron |
| TACTTCAAACAGATGTGAAA+TGG | 0.440857 | 2_2:-10931312 | Msa0237670:CDS |
| TGCTGCAGTCTGTGAGGAGC+TGG | 0.442125 | 2_2:-10929600 | Msa0237670:three_prime_UTR |
| ACAAAGAGCATGAGGGAAGA+TGG | 0.452148 | 2_2:-10930212 | Msa0237670:CDS |
| TGTACCTTGAAGCCCAGATA+TGG | 0.456041 | 2_2:+10930794 | None:intergenic |
| CTTGTCTGACATTGTGTAGA+AGG | 0.457305 | 2_2:+10932685 | None:intergenic |
| CCATGTGGACCTTGTGGCGA+AGG | 0.460628 | 2_2:+10930150 | None:intergenic |
| CTCCACATCTTTGATGAGGT+TGG | 0.462942 | 2_2:+10932634 | None:intergenic |
| GAGACTGAGAAGAATGGAAA+AGG | 0.472602 | 2_2:-10929910 | Msa0237670:intron |
| GGCAGAGAGTACATTATTGT+GGG | 0.479550 | 2_2:-10929716 | Msa0237670:CDS |
| GAGGGAAGATGGAGGATTTG+AGG | 0.482374 | 2_2:-10930201 | Msa0237670:CDS |
| CCACCAACAGGCCAACCTAA+TGG | 0.483275 | 2_2:+10931289 | None:intergenic |
| CTTCCTAAGTGGAACTATGA+TGG | 0.483826 | 2_2:-10931895 | Msa0237670:CDS |
| AGAAGGAGATTTACCTGGCC+AGG | 0.485726 | 2_2:+10931032 | None:intergenic |
| GCAATTATGCTGTTAGTGAA+TGG | 0.489752 | 2_2:+10932496 | None:intergenic |
| TGGTGGCTATCCTGGTCCTC+AGG | 0.500616 | 2_2:-10931272 | Msa0237670:intron |
| GGTTGGAGTTGCAATGGAAG+AGG | 0.502865 | 2_2:+10932651 | None:intergenic |
| CCATTAGGTTGGCCTGTTGG+TGG | 0.503990 | 2_2:-10931289 | Msa0237670:CDS |
| GGACCAGGATAGCCACCAAC+AGG | 0.504091 | 2_2:+10931277 | None:intergenic |
| TTCTGATAAATTCAGAGTAA+TGG | 0.507890 | 2_2:-10932575 | Msa0237670:CDS |
| TGGCAGAGAGTACATTATTG+TGG | 0.507952 | 2_2:-10929717 | Msa0237670:CDS |
| ACATGTGTTAGTGTCGTGTC+TGG | 0.508859 | 2_2:-10932796 | Msa0237670:five_prime_UTR |
| GGAAGAGAGACTGAGAAGAA+TGG | 0.511936 | 2_2:-10929916 | Msa0237670:CDS |
| AGAGTAATGGCAATCAACTC+TGG | 0.512452 | 2_2:-10932562 | Msa0237670:CDS |
| TAGTGTCGTGTCTGGTGTCT+GGG | 0.514839 | 2_2:-10932788 | Msa0237670:five_prime_UTR |
| ACTAATGCAGAGGTTATGCC+TGG | 0.517765 | 2_2:-10931050 | Msa0237670:CDS |
| TGCAGAGGTTATGCCTGGCC+AGG | 0.520775 | 2_2:-10931045 | Msa0237670:intron |
| AAGGTCCACATGGAAGCATA+TGG | 0.524565 | 2_2:-10930140 | Msa0237670:CDS |
| TATGGATCCATGTTTGAAGC+TGG | 0.531181 | 2_2:+10929757 | None:intergenic |
| CTTCAGAAACCCAAAGGTTG+AGG | 0.531193 | 2_2:-10931524 | Msa0237670:CDS |
| TATCTCTTATTTGTAGCGAT+AGG | 0.538893 | 2_2:+10931562 | None:intergenic |
| GAATTTATCCCTTCGCCACA+AGG | 0.546223 | 2_2:-10930159 | Msa0237670:CDS |
| CCTTGATCCAAAACCAATTG+AGG | 0.548996 | 2_2:-10930487 | Msa0237670:intron |
| TGGCACCATCAACAGGGTTG+AGG | 0.550831 | 2_2:-10932542 | Msa0237670:CDS |
| TGAAGCTGCTGACCATATCT+GGG | 0.554602 | 2_2:-10930806 | Msa0237670:CDS |
| GTCTGTGTTAACATATGGTA+TGG | 0.558902 | 2_2:-10929444 | Msa0237670:three_prime_UTR |
| AACTATGATGGATCTAGCAC+TGG | 0.560911 | 2_2:-10931883 | Msa0237670:CDS |
| CAGACGTCCAGCTTCAAACA+TGG | 0.561716 | 2_2:-10929764 | Msa0237670:CDS |
| GATCCATCATAGTTCCACTT+AGG | 0.563451 | 2_2:+10931892 | None:intergenic |
| TGATGGATCTAGCACTGGAC+AGG | 0.564127 | 2_2:-10931878 | Msa0237670:CDS |
| AGGATTTGAGGTCATAAAGA+AGG | 0.566148 | 2_2:-10930189 | Msa0237670:CDS |
| TATATCTGATGCTCATTACA+AGG | 0.567381 | 2_2:-10931105 | Msa0237670:CDS |
| AGAGCTTCAGCCTCTAGAGT+TGG | 0.568683 | 2_2:+10929691 | None:intergenic |
| TTCAAACATGGATCCATATG+TGG | 0.571364 | 2_2:-10929752 | Msa0237670:CDS |
| TGGCCATTAGGTTGGCCTGT+TGG | 0.578206 | 2_2:-10931292 | Msa0237670:CDS |
| TCCAAATGACTTATCTGCCC+CGG | 0.580834 | 2_2:+10931133 | None:intergenic |
| CAGGGTGACTGGAATGGTGC+AGG | 0.581852 | 2_2:-10930354 | Msa0237670:CDS |
| ATGGAGAAGGAAATGAGAGA+AGG | 0.582440 | 2_2:-10930121 | Msa0237670:CDS |
| CCTTCGCCACAAGGTCCACA+TGG | 0.585660 | 2_2:-10930150 | Msa0237670:CDS |
| CCAAGAAAATGTGTTGATGC+TGG | 0.585913 | 2_2:+10930076 | None:intergenic |
| ATGTGAAATGGCCATTAGGT+TGG | 0.587256 | 2_2:-10931300 | Msa0237670:CDS |
| CTCCAACCTCATCAAAGATG+TGG | 0.593992 | 2_2:-10932636 | Msa0237670:CDS |
| GTATTAGTTACCTGAGGACC+AGG | 0.594950 | 2_2:+10931262 | None:intergenic |
| CATGTGGACCTTGTGGCGAA+GGG | 0.595534 | 2_2:+10930151 | None:intergenic |
| ACGTGGATGCTCAATTCGTG+TGG | 0.598946 | 2_2:-10929938 | Msa0237670:CDS |
| CACATGGAAGCATATGGAGA+AGG | 0.600933 | 2_2:-10930134 | Msa0237670:CDS |
| TATCAAGTTGGTCCTAGTGT+AGG | 0.601050 | 2_2:-10930832 | Msa0237670:CDS |
| ATCCCTCTGAGCTTCCTAAG+TGG | 0.601311 | 2_2:-10931906 | Msa0237670:CDS |
| TCCTTATTACTGTGGTGCCG+GGG | 0.602095 | 2_2:-10931150 | Msa0237670:CDS |
| TTGCAGTGGGAGTATCAAGT+TGG | 0.608671 | 2_2:-10930844 | Msa0237670:intron |
| TGATGAGGTTGGAGTTGCAA+TGG | 0.610094 | 2_2:+10932645 | None:intergenic |
| CAGAGAATTACTGAACAAGC+TGG | 0.610576 | 2_2:-10930522 | Msa0237670:CDS |
| AGGTTGAGGCTGAAATTCCA+TGG | 0.614181 | 2_2:-10931510 | Msa0237670:intron |
| CTTCTCCATATGCTTCCATG+TGG | 0.614984 | 2_2:+10930135 | None:intergenic |
| TGCGATGCTTATACAACACA+AGG | 0.616318 | 2_2:-10931589 | Msa0237670:CDS |
| TTCCACTTAGGAAGCTCAGA+GGG | 0.616333 | 2_2:+10931904 | None:intergenic |
| AGAACTCCACATCTTTGATG+AGG | 0.618211 | 2_2:+10932630 | None:intergenic |
| TATGCTGGAATTAACATCAG+TGG | 0.620743 | 2_2:-10931074 | Msa0237670:CDS |
| GCAGCTTCAATACCTACACT+AGG | 0.626988 | 2_2:+10930820 | None:intergenic |
| CGTGGATGCTCAATTCGTGT+GGG | 0.628426 | 2_2:-10929937 | Msa0237670:CDS |
| ATGCTTCCATGTGGACCTTG+TGG | 0.630433 | 2_2:+10930144 | None:intergenic |
| CCTTGACAGGGTGACTGGAA+TGG | 0.632303 | 2_2:-10930360 | Msa0237670:intron |
| CGGCACTGCTGCAGTCTGTG+AGG | 0.634575 | 2_2:-10929606 | Msa0237670:three_prime_UTR |
| TATCAGGGTCCTTATTACTG+TGG | 0.636323 | 2_2:-10931158 | Msa0237670:intron |
| AATGGCGTTCTAGATGGAGT+CGG | 0.642104 | 2_2:-10929626 | Msa0237670:three_prime_UTR |
| ATGCAGGGAATTGGTAAACG+TGG | 0.644180 | 2_2:-10929955 | Msa0237670:intron |
| GGCTTCAAGGTACATCCTTG+AGG | 0.647096 | 2_2:-10930785 | Msa0237670:intron |
| TGAAATCTTCAGAAACCCAA+AGG | 0.650810 | 2_2:-10931530 | Msa0237670:CDS |
| CATCAGTGGCACTAATGCAG+AGG | 0.657463 | 2_2:-10931060 | Msa0237670:CDS |
| AAGAGCATGAGGGAAGATGG+AGG | 0.657505 | 2_2:-10930209 | Msa0237670:CDS |
| CAACTCTGGCACCATCAACA+GGG | 0.659254 | 2_2:-10932548 | Msa0237670:CDS |
| ATTGTGGGAACCAACTCTAG+AGG | 0.660710 | 2_2:-10929701 | Msa0237670:CDS |
| CACTTCAGTATCTTCACGAG+GGG | 0.662399 | 2_2:+10931855 | None:intergenic |
| ATCACTTCAGTATCTTCACG+AGG | 0.668751 | 2_2:+10931853 | None:intergenic |
| TCACTTCAGTATCTTCACGA+GGG | 0.689367 | 2_2:+10931854 | None:intergenic |
| GTTCCACTTAGGAAGCTCAG+AGG | 0.715738 | 2_2:+10931903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTTTTTTTTTTGG+TGG | + | chr2_2:10931827-10931846 | None:intergenic | 10.0% |
| !!! | AAAAAATTTACTAATTGTTT+TGG | - | chr2_2:10931838-10931857 | Msa0237670:intron | 10.0% |
| !! | ACTAGTAATAATTAAGATAA+TGG | + | chr2_2:10929391-10929410 | None:intergenic | 15.0% |
| !! | TATATACTCATAATTTGATT+AGG | + | chr2_2:10929811-10929830 | None:intergenic | 15.0% |
| !! | AAAAAAGATCAAATTAAATC+TGG | + | chr2_2:10930463-10930482 | None:intergenic | 15.0% |
| !!! | GTTGGTAATATTAAAAAATA+AGG | + | chr2_2:10930756-10930775 | None:intergenic | 15.0% |
| !!! | TGTTTTATTTCAAATTTCAT+AGG | - | chr2_2:10930999-10931018 | Msa0237670:intron | 15.0% |
| !! | AAACAATTCAAATAATTACA+AGG | + | chr2_2:10931340-10931359 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTAAGCAGAACA+TGG | - | chr2_2:10929505-10929524 | Msa0237670:intron | 20.0% |
| !! | AGAATACAAAACATATATAC+AGG | + | chr2_2:10930276-10930295 | None:intergenic | 20.0% |
| !! | AATTTGCAAACTTCAAAATA+TGG | - | chr2_2:10931022-10931041 | Msa0237670:intron | 20.0% |
| !!! | AATTTCATTTAACCTACTTT+TGG | - | chr2_2:10931466-10931485 | Msa0237670:intron | 20.0% |
| !!! | ATTTCATTTAACCTACTTTT+GGG | - | chr2_2:10931467-10931486 | Msa0237670:intron | 20.0% |
| !! | TGAAATATTCTTATATATGC+AGG | - | chr2_2:10932256-10932275 | Msa0237670:intron | 20.0% |
| !! | GAAATATTCTTATATATGCA+GGG | - | chr2_2:10932257-10932276 | Msa0237670:intron | 20.0% |
| ! | TTCTGATAAATTCAGAGTAA+TGG | - | chr2_2:10929652-10929671 | Msa0237670:exon | 25.0% |
| !! | ATTCTTTTTCTAAACAGGAT+TGG | - | chr2_2:10929887-10929906 | Msa0237670:intron | 25.0% |
| !! | TTAGGTTGTTTATCAAAACA+TGG | + | chr2_2:10929961-10929980 | None:intergenic | 25.0% |
| ! | ATGACAAGAATTTATGCTAT+AGG | + | chr2_2:10929991-10930010 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAATAGTTCA+TGG | - | chr2_2:10930126-10930145 | Msa0237670:CDS | 25.0% |
| ! | ATCAGACAATAACATTAGTA+GGG | + | chr2_2:10930229-10930248 | None:intergenic | 25.0% |
| ! | AATCAGACAATAACATTAGT+AGG | + | chr2_2:10930230-10930249 | None:intergenic | 25.0% |
| ! | CAGAAACAAATTCTTACTAT+AGG | + | chr2_2:10930400-10930419 | None:intergenic | 25.0% |
| ! | AGATCAAATTAAATCTGGAA+TGG | + | chr2_2:10930458-10930477 | None:intergenic | 25.0% |
| !!! | TATCTTCTATTTTAGATGCT+CGG | + | chr2_2:10930799-10930818 | None:intergenic | 25.0% |
| !! | ATAGAAGATAACTGAACTTT+TGG | - | chr2_2:10930809-10930828 | Msa0237670:CDS | 25.0% |
| ! | GAAATAAAACACAAAAGAAC+TGG | + | chr2_2:10930990-10931009 | None:intergenic | 25.0% |
| ! | AAAAGATTTCTTGATGTATC+AGG | - | chr2_2:10931053-10931072 | Msa0237670:CDS | 25.0% |
| ! | AAAGATTTCTTGATGTATCA+GGG | - | chr2_2:10931054-10931073 | Msa0237670:CDS | 25.0% |
| ! | ATCATAACACATGATACAAA+AGG | + | chr2_2:10931224-10931243 | None:intergenic | 25.0% |
| ! | ACTTCATAATAAAGTATGTC+AGG | + | chr2_2:10931303-10931322 | None:intergenic | 25.0% |
| ! | CATACTTTATTATGAAGTGT+CGG | - | chr2_2:10931305-10931324 | Msa0237670:CDS | 25.0% |
| !!! | TTGTTTTATGAATATTGCAG+TGG | - | chr2_2:10931369-10931388 | Msa0237670:intron | 25.0% |
| !! | TGTTTTATGAATATTGCAGT+GGG | - | chr2_2:10931370-10931389 | Msa0237670:intron | 25.0% |
| !!! | TTTCATTTAACCTACTTTTG+GGG | - | chr2_2:10931468-10931487 | Msa0237670:intron | 25.0% |
| !!! | TGTTTTGATTGTAGGTTATT+TGG | - | chr2_2:10932436-10932455 | Msa0237670:intron | 25.0% |
| !! | GGTCTAAATCTATTGATTAA+TGG | - | chr2_2:10932583-10932602 | Msa0237670:CDS | 25.0% |
| !! | AGTATTAATATCTTGTTGTC+TGG | - | chr2_2:10932689-10932708 | Msa0237670:CDS | 25.0% |
| TTCTTCTGTATGAACTATGA+AGG | - | chr2_2:10929843-10929862 | Msa0237670:intron | 30.0% | |
| ! | CTGTGATTCTTTTTCTAAAC+AGG | - | chr2_2:10929882-10929901 | Msa0237670:intron | 30.0% |
| TATGCTATAGGCAGTTAATT+AGG | + | chr2_2:10929979-10929998 | None:intergenic | 30.0% | |
| !! | GTTATTTTCATAAGCTGTTG+TGG | - | chr2_2:10930091-10930110 | Msa0237670:CDS | 30.0% |
| ACCCATACAATGTTGTAAAT+AGG | - | chr2_2:10930189-10930208 | Msa0237670:CDS | 30.0% | |
| GCCTATTTACAACATTGTAT+GGG | + | chr2_2:10930193-10930212 | None:intergenic | 30.0% | |
| AGCCTATTTACAACATTGTA+TGG | + | chr2_2:10930194-10930213 | None:intergenic | 30.0% | |
| ! | TTCATGACATGTTGATTGAA+AGG | - | chr2_2:10930568-10930587 | Msa0237670:intron | 30.0% |
| !! | CGAATTATTTTGTTTCACGA+AGG | - | chr2_2:10930610-10930629 | Msa0237670:intron | 30.0% |
| ! | TATCTCTTATTTGTAGCGAT+AGG | + | chr2_2:10930668-10930687 | None:intergenic | 30.0% |
| ! | GTTGTATGTTGATTGTTCAA+AGG | - | chr2_2:10930867-10930886 | Msa0237670:intron | 30.0% |
| ! | ATGTTGATTGTTCAAAGGTT+CGG | - | chr2_2:10930872-10930891 | Msa0237670:intron | 30.0% |
| ! | TTTCACATCTGTTTGAAGTA+AGG | + | chr2_2:10930915-10930934 | None:intergenic | 30.0% |
| TACTTCAAACAGATGTGAAA+TGG | - | chr2_2:10930915-10930934 | Msa0237670:intron | 30.0% | |
| TATATCTGATGCTCATTACA+AGG | - | chr2_2:10931122-10931141 | Msa0237670:CDS | 30.0% | |
| GGTTAAATGAAATTACCTCA+AGG | + | chr2_2:10931460-10931479 | None:intergenic | 30.0% | |
| TAGAACTATACGATACAGAA+AGG | - | chr2_2:10931548-10931567 | Msa0237670:CDS | 30.0% | |
| !!! | GGCTTTTGGTTCATTAATAA+TGG | - | chr2_2:10931626-10931645 | Msa0237670:intron | 30.0% |
| !! | AACAATACCTCAATTGGTTT+TGG | + | chr2_2:10931750-10931769 | None:intergenic | 30.0% |
| AAGCATAACAATACCTCAAT+TGG | + | chr2_2:10931756-10931775 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTTAACCTTGACA+GGG | - | chr2_2:10931855-10931874 | Msa0237670:intron | 30.0% |
| CATGTCAAAAAACCTGTAAT+TGG | + | chr2_2:10931907-10931926 | None:intergenic | 30.0% | |
| !! | TTTTTAGTACAAAGAGCATG+AGG | - | chr2_2:10932007-10932026 | Msa0237670:intron | 30.0% |
| !! | TTTTAGTACAAAGAGCATGA+GGG | - | chr2_2:10932008-10932027 | Msa0237670:intron | 30.0% |
| TTCTTATATATGCAGGGAAT+TGG | - | chr2_2:10932263-10932282 | Msa0237670:intron | 30.0% | |
| AATAATGCTGTTACCACATA+TGG | + | chr2_2:10932491-10932510 | None:intergenic | 30.0% | |
| ATATGTGGTAACAGCATTAT+TGG | - | chr2_2:10932490-10932509 | Msa0237670:CDS | 30.0% | |
| TCATCTCATAACCAATAACT+AGG | + | chr2_2:10932733-10932752 | None:intergenic | 30.0% | |
| GGTTGAGGATCTACTTAATT+TGG | - | chr2_2:10929700-10929719 | Msa0237670:CDS | 35.0% | |
| GCAATTATGCTGTTAGTGAA+TGG | + | chr2_2:10929734-10929753 | None:intergenic | 35.0% | |
| ! | CTTTTTCTAAACAGGATTGG+TGG | - | chr2_2:10929890-10929909 | Msa0237670:intron | 35.0% |
| ! | ATTAAATCTGGAATGGCATG+TGG | + | chr2_2:10930451-10930470 | None:intergenic | 35.0% |
| ! | GGATCTTTGAAAATTGCTTG+AGG | + | chr2_2:10930496-10930515 | None:intergenic | 35.0% |
| ! | ATTTTCAAAGATCCTTTCCG+CGG | - | chr2_2:10930502-10930521 | Msa0237670:CDS | 35.0% |
| !! | GGTAACAACATTTTGGTAAG+CGG | - | chr2_2:10930526-10930545 | Msa0237670:intron | 35.0% |
| TGAAATCTTCAGAAACCCAA+AGG | - | chr2_2:10930697-10930716 | Msa0237670:intron | 35.0% | |
| AAGGAGTAACATACATACCA+TGG | + | chr2_2:10930737-10930756 | None:intergenic | 35.0% | |
| GCATTGCATCTAACAATAGT+TGG | + | chr2_2:10930774-10930793 | None:intergenic | 35.0% | |
| ! | TACAAGGCTTGTTTATATGC+TGG | - | chr2_2:10931138-10931157 | Msa0237670:CDS | 35.0% |
| TATGCTGGAATTAACATCAG+TGG | - | chr2_2:10931153-10931172 | Msa0237670:CDS | 35.0% | |
| CATGATACAAAAGGAACAGA+AGG | + | chr2_2:10931215-10931234 | None:intergenic | 35.0% | |
| ATTGACACAGACACATACAT+CGG | - | chr2_2:10931253-10931272 | Msa0237670:intron | 35.0% | |
| GATACAGAAAGGTTAAGCTT+CGG | - | chr2_2:10931559-10931578 | Msa0237670:CDS | 35.0% | |
| TCAGTGTCTAAATTCTGTAG+AGG | - | chr2_2:10931605-10931624 | Msa0237670:intron | 35.0% | |
| ! | CTAAATTCTGTAGAGGCTTT+TGG | - | chr2_2:10931612-10931631 | Msa0237670:intron | 35.0% |
| !!! | GTTTTGGTTTTAACCTTGAC+AGG | - | chr2_2:10931854-10931873 | Msa0237670:intron | 35.0% |
| ! | AGGATTTGAGGTCATAAAGA+AGG | - | chr2_2:10932038-10932057 | Msa0237670:intron | 35.0% |
| ! | CAGCATCAACACATTTTCTT+GGG | - | chr2_2:10932152-10932171 | Msa0237670:intron | 35.0% |
| TACAATCAAAACATCAGCGA+AGG | + | chr2_2:10932429-10932448 | None:intergenic | 35.0% | |
| !!! | TTCGCTGATGTTTTGATTGT+AGG | - | chr2_2:10932428-10932447 | Msa0237670:intron | 35.0% |
| TTCAAACATGGATCCATATG+TGG | - | chr2_2:10932475-10932494 | Msa0237670:intron | 35.0% | |
| ! | TTGATTAATGGCGTTCTAGA+TGG | - | chr2_2:10932595-10932614 | Msa0237670:CDS | 35.0% |
| TCATAACCAATAACTAGGCA+TGG | + | chr2_2:10932728-10932747 | None:intergenic | 35.0% | |
| TCGTTGTCTGTGTTAACATA+TGG | - | chr2_2:10932778-10932797 | Msa0237670:five_prime_UTR | 35.0% | |
| GTCTGTGTTAACATATGGTA+TGG | - | chr2_2:10932783-10932802 | Msa0237670:five_prime_UTR | 35.0% | |
| CTTGTCTGACATTGTGTAGA+AGG | + | chr2_2:10929545-10929564 | None:intergenic | 40.0% | |
| AGAACTCCACATCTTTGATG+AGG | + | chr2_2:10929600-10929619 | None:intergenic | 40.0% | |
| AGAGTAATGGCAATCAACTC+TGG | - | chr2_2:10929665-10929684 | Msa0237670:CDS | 40.0% | |
| GCATAATTGCTGAGTACATC+TGG | - | chr2_2:10929744-10929763 | Msa0237670:CDS | 40.0% | |
| AAGCTGTTGTGGAGAACTTA+TGG | - | chr2_2:10930102-10930121 | Msa0237670:CDS | 40.0% | |
| CAACATTGTATGGGTCTGTT+TGG | + | chr2_2:10930184-10930203 | None:intergenic | 40.0% | |
| ! | ATGCTCAACAGGCTTTGATA+TGG | + | chr2_2:10930303-10930322 | None:intergenic | 40.0% |
| CTTCCTAAGTGGAACTATGA+TGG | - | chr2_2:10930332-10930351 | Msa0237670:intron | 40.0% | |
| GATCCATCATAGTTCCACTT+AGG | + | chr2_2:10930338-10930357 | None:intergenic | 40.0% | |
| !! | AACTATGATGGATCTAGCAC+TGG | - | chr2_2:10930344-10930363 | Msa0237670:CDS | 40.0% |
| TCACTTCAGTATCTTCACGA+GGG | + | chr2_2:10930376-10930395 | None:intergenic | 40.0% | |
| ATCACTTCAGTATCTTCACG+AGG | + | chr2_2:10930377-10930396 | None:intergenic | 40.0% | |
| TGAAAATTGCTTGAGGACTG+AGG | + | chr2_2:10930489-10930508 | None:intergenic | 40.0% | |
| TGCGATGCTTATACAACACA+AGG | - | chr2_2:10930638-10930657 | Msa0237670:intron | 40.0% | |
| GAATTTCAGCCTCAACCTTT+GGG | + | chr2_2:10930715-10930734 | None:intergenic | 40.0% | |
| ACAGATGTGAAATGGCCATT+AGG | - | chr2_2:10930923-10930942 | Msa0237670:intron | 40.0% | |
| ATGTGAAATGGCCATTAGGT+TGG | - | chr2_2:10930927-10930946 | Msa0237670:intron | 40.0% | |
| GAACTGGTATTAGTTACCTG+AGG | + | chr2_2:10930974-10930993 | None:intergenic | 40.0% | |
| TATCAGGGTCCTTATTACTG+TGG | - | chr2_2:10931069-10931088 | Msa0237670:CDS | 40.0% | |
| !! | TATCAAGTTGGTCCTAGTGT+AGG | - | chr2_2:10931395-10931414 | Msa0237670:intron | 40.0% |
| TGTGTGTAAACCCCAAAAGT+AGG | + | chr2_2:10931481-10931500 | None:intergenic | 40.0% | |
| CAGAGAATTACTGAACAAGC+TGG | - | chr2_2:10931705-10931724 | Msa0237670:intron | 40.0% | |
| !!! | CCTCAATTGGTTTTGGATCA+AGG | + | chr2_2:10931743-10931762 | None:intergenic | 40.0% |
| CCTTGATCCAAAACCAATTG+AGG | - | chr2_2:10931740-10931759 | Msa0237670:intron | 40.0% | |
| CAGGATGTCATACCAATTAC+AGG | - | chr2_2:10931892-10931911 | Msa0237670:CDS | 40.0% | |
| ATGGAGAAGGAAATGAGAGA+AGG | - | chr2_2:10932106-10932125 | Msa0237670:intron | 40.0% | |
| ! | CCAAGAAAATGTGTTGATGC+TGG | + | chr2_2:10932154-10932173 | None:intergenic | 40.0% |
| ! | CCAGCATCAACACATTTTCT+TGG | - | chr2_2:10932151-10932170 | Msa0237670:intron | 40.0% |
| GAGACTGAGAAGAATGGAAA+AGG | - | chr2_2:10932317-10932336 | Msa0237670:CDS | 40.0% | |
| ! | TATGGATCCATGTTTGAAGC+TGG | + | chr2_2:10932473-10932492 | None:intergenic | 40.0% |
| ! | TGGCAGAGAGTACATTATTG+TGG | - | chr2_2:10932510-10932529 | Msa0237670:CDS | 40.0% |
| ! | GGCAGAGAGTACATTATTGT+GGG | - | chr2_2:10932511-10932530 | Msa0237670:CDS | 40.0% |
| ! | TCTTGTTGTCTGGACAAATG+AGG | - | chr2_2:10932699-10932718 | Msa0237670:CDS | 40.0% |
| ACATGTGTTAGTGTCGTGTC+TGG | - | chr2_2:10929431-10929450 | Msa0237670:three_prime_UTR | 45.0% | |
| ! | GCAGAACATGGCACAGATTT+TGG | - | chr2_2:10929517-10929536 | Msa0237670:intron | 45.0% |
| TGATGAGGTTGGAGTTGCAA+TGG | + | chr2_2:10929585-10929604 | None:intergenic | 45.0% | |
| CTCCAACCTCATCAAAGATG+TGG | - | chr2_2:10929591-10929610 | Msa0237670:three_prime_UTR | 45.0% | |
| CTCCACATCTTTGATGAGGT+TGG | + | chr2_2:10929596-10929615 | None:intergenic | 45.0% | |
| TAGATCCTCAACCCTGTTGA+TGG | + | chr2_2:10929693-10929712 | None:intergenic | 45.0% | |
| ! | CTAAACAGGATTGGTGGAAC+AGG | - | chr2_2:10929896-10929915 | Msa0237670:intron | 45.0% |
| TTCCACTTAGGAAGCTCAGA+GGG | + | chr2_2:10930326-10930345 | None:intergenic | 45.0% | |
| CACTTCAGTATCTTCACGAG+GGG | + | chr2_2:10930375-10930394 | None:intergenic | 45.0% | |
| AAATTGCTTGAGGACTGAGG+AGG | + | chr2_2:10930486-10930505 | None:intergenic | 45.0% | |
| CCAAAATGTTGTTACCACCG+CGG | + | chr2_2:10930522-10930541 | None:intergenic | 45.0% | |
| CTTCAGAAACCCAAAGGTTG+AGG | - | chr2_2:10930703-10930722 | Msa0237670:intron | 45.0% | |
| GGAATTTCAGCCTCAACCTT+TGG | + | chr2_2:10930716-10930735 | None:intergenic | 45.0% | |
| AGGTTGAGGCTGAAATTCCA+TGG | - | chr2_2:10930717-10930736 | Msa0237670:intron | 45.0% | |
| GTATTAGTTACCTGAGGACC+AGG | + | chr2_2:10930968-10930987 | None:intergenic | 45.0% | |
| TCCAAATGACTTATCTGCCC+CGG | + | chr2_2:10931097-10931116 | None:intergenic | 45.0% | |
| ACTAATGCAGAGGTTATGCC+TGG | - | chr2_2:10931177-10931196 | Msa0237670:intron | 45.0% | |
| GGAACAGAAGGAGATTTACC+TGG | + | chr2_2:10931203-10931222 | None:intergenic | 45.0% | |
| !! | TTGCAGTGGGAGTATCAAGT+TGG | - | chr2_2:10931383-10931402 | Msa0237670:intron | 45.0% |
| GCAGCTTCAATACCTACACT+AGG | + | chr2_2:10931410-10931429 | None:intergenic | 45.0% | |
| TTGAAGCTGCTGACCATATC+TGG | - | chr2_2:10931420-10931439 | Msa0237670:intron | 45.0% | |
| TGAAGCTGCTGACCATATCT+GGG | - | chr2_2:10931421-10931440 | Msa0237670:intron | 45.0% | |
| TGTACCTTGAAGCCCAGATA+TGG | + | chr2_2:10931436-10931455 | None:intergenic | 45.0% | |
| TTTAACCTTGACAGGGTGAC+TGG | - | chr2_2:10931862-10931881 | Msa0237670:CDS | 45.0% | |
| ! | ACAAAGAGCATGAGGGAAGA+TGG | - | chr2_2:10932015-10932034 | Msa0237670:intron | 45.0% |
| GAATTTATCCCTTCGCCACA+AGG | - | chr2_2:10932068-10932087 | Msa0237670:intron | 45.0% | |
| ! | AAGGTCCACATGGAAGCATA+TGG | - | chr2_2:10932087-10932106 | Msa0237670:intron | 45.0% |
| CTTCTCCATATGCTTCCATG+TGG | + | chr2_2:10932095-10932114 | None:intergenic | 45.0% | |
| ! | CACATGGAAGCATATGGAGA+AGG | - | chr2_2:10932093-10932112 | Msa0237670:intron | 45.0% |
| GGAAATGAGAGAAGGTTGAC+AGG | - | chr2_2:10932114-10932133 | Msa0237670:intron | 45.0% | |
| ATGCAGGGAATTGGTAAACG+TGG | - | chr2_2:10932272-10932291 | Msa0237670:intron | 45.0% | |
| GGAAGAGAGACTGAGAAGAA+TGG | - | chr2_2:10932311-10932330 | Msa0237670:CDS | 45.0% | |
| ATTGTGGGAACCAACTCTAG+AGG | - | chr2_2:10932526-10932545 | Msa0237670:CDS | 45.0% | |
| AGCTCAGAAGCTTGCATTGA+AGG | - | chr2_2:10932562-10932581 | Msa0237670:CDS | 45.0% | |
| ! | AATGGCGTTCTAGATGGAGT+CGG | - | chr2_2:10932601-10932620 | Msa0237670:CDS | 45.0% |
| !!! | AGTAAATTTTTTTTTTTTTT+TGG | + | chr2_2:10931830-10931849 | None:intergenic | 5.0% |
| !! | ATAAATATAAATAATCTAAA+AGG | + | chr2_2:10932669-10932688 | None:intergenic | 5.0% |
| TTAGTGTCGTGTCTGGTGTC+TGG | - | chr2_2:10929438-10929457 | Msa0237670:three_prime_UTR | 50.0% | |
| TAGTGTCGTGTCTGGTGTCT+GGG | - | chr2_2:10929439-10929458 | Msa0237670:three_prime_UTR | 50.0% | |
| GGTTGGAGTTGCAATGGAAG+AGG | + | chr2_2:10929579-10929598 | None:intergenic | 50.0% | |
| TCAACTCTGGCACCATCAAC+AGG | - | chr2_2:10929678-10929697 | Msa0237670:CDS | 50.0% | |
| CAACTCTGGCACCATCAACA+GGG | - | chr2_2:10929679-10929698 | Msa0237670:CDS | 50.0% | |
| ATCCCTCTGAGCTTCCTAAG+TGG | - | chr2_2:10930321-10930340 | Msa0237670:intron | 50.0% | |
| GTTCCACTTAGGAAGCTCAG+AGG | + | chr2_2:10930327-10930346 | None:intergenic | 50.0% | |
| ! | TGATGGATCTAGCACTGGAC+AGG | - | chr2_2:10930349-10930368 | Msa0237670:CDS | 50.0% |
| TTCAAAGATCCTTTCCGCGG+TGG | - | chr2_2:10930505-10930524 | Msa0237670:CDS | 50.0% | |
| ATGTTGTTACCACCGCGGAA+AGG | + | chr2_2:10930517-10930536 | None:intergenic | 50.0% | |
| ! | CCGCGGTGGTAACAACATTT+TGG | - | chr2_2:10930519-10930538 | Msa0237670:CDS | 50.0% |
| GGTCCTTATTACTGTGGTGC+CGG | - | chr2_2:10931075-10931094 | Msa0237670:CDS | 50.0% | |
| GTCCTTATTACTGTGGTGCC+GGG | - | chr2_2:10931076-10931095 | Msa0237670:CDS | 50.0% | |
| ! | TCCTTATTACTGTGGTGCCG+GGG | - | chr2_2:10931077-10931096 | Msa0237670:CDS | 50.0% |
| CATCAGTGGCACTAATGCAG+AGG | - | chr2_2:10931167-10931186 | Msa0237670:intron | 50.0% | |
| AGAAGGAGATTTACCTGGCC+AGG | + | chr2_2:10931198-10931217 | None:intergenic | 50.0% | |
| GTCCAACACGTTTGGTTACC+TGG | + | chr2_2:10931279-10931298 | None:intergenic | 50.0% | |
| TGTCAGGTGTCCAACACGTT+TGG | + | chr2_2:10931287-10931306 | None:intergenic | 50.0% | |
| CTGACCATATCTGGGCTTCA+AGG | - | chr2_2:10931429-10931448 | Msa0237670:intron | 50.0% | |
| GGCTTCAAGGTACATCCTTG+AGG | - | chr2_2:10931442-10931461 | Msa0237670:intron | 50.0% | |
| ! | AAGAGCATGAGGGAAGATGG+AGG | - | chr2_2:10932018-10932037 | Msa0237670:intron | 50.0% |
| GAGGGAAGATGGAGGATTTG+AGG | - | chr2_2:10932026-10932045 | Msa0237670:intron | 50.0% | |
| ATGCTTCCATGTGGACCTTG+TGG | + | chr2_2:10932086-10932105 | None:intergenic | 50.0% | |
| ACGTGGATGCTCAATTCGTG+TGG | - | chr2_2:10932289-10932308 | Msa0237670:intron | 50.0% | |
| CGTGGATGCTCAATTCGTGT+GGG | - | chr2_2:10932290-10932309 | Msa0237670:intron | 50.0% | |
| CAGACGTCCAGCTTCAAACA+TGG | - | chr2_2:10932463-10932482 | Msa0237670:intron | 50.0% | |
| !! | AGAGCTTCAGCCTCTAGAGT+TGG | + | chr2_2:10932539-10932558 | None:intergenic | 50.0% |
| AGGCTGCCATGCCTAGTTAT+TGG | - | chr2_2:10932719-10932738 | Msa0237670:exon | 50.0% | |
| TGGCACCATCAACAGGGTTG+AGG | - | chr2_2:10929685-10929704 | Msa0237670:CDS | 55.0% | |
| AGCTCAGAGGGATGCTCAAC+AGG | + | chr2_2:10930314-10930333 | None:intergenic | 55.0% | |
| !! | TGGCCATTAGGTTGGCCTGT+TGG | - | chr2_2:10930935-10930954 | Msa0237670:intron | 55.0% |
| CCACCAACAGGCCAACCTAA+TGG | + | chr2_2:10930941-10930960 | None:intergenic | 55.0% | |
| !! | CCATTAGGTTGGCCTGTTGG+TGG | - | chr2_2:10930938-10930957 | Msa0237670:intron | 55.0% |
| GCCGGGGCAGATAAGTCATT+TGG | - | chr2_2:10931093-10931112 | Msa0237670:CDS | 55.0% | |
| CACAGACACATACATCGGCC+AGG | - | chr2_2:10931258-10931277 | Msa0237670:intron | 55.0% | |
| GGCCAGGTAACCAAACGTGT+TGG | - | chr2_2:10931274-10931293 | Msa0237670:CDS | 55.0% | |
| CCATTCCAGTCACCCTGTCA+AGG | + | chr2_2:10931870-10931889 | None:intergenic | 55.0% | |
| CCTTGACAGGGTGACTGGAA+TGG | - | chr2_2:10931867-10931886 | Msa0237670:CDS | 55.0% | |
| CATGTGGACCTTGTGGCGAA+GGG | + | chr2_2:10932079-10932098 | None:intergenic | 55.0% | |
| !! | TGGCCTGTTGGTGGCTATCC+TGG | - | chr2_2:10930947-10930966 | Msa0237670:intron | 60.0% |
| GGACCAGGATAGCCACCAAC+AGG | + | chr2_2:10930953-10930972 | None:intergenic | 60.0% | |
| TGGTGGCTATCCTGGTCCTC+AGG | - | chr2_2:10930955-10930974 | Msa0237670:intron | 60.0% | |
| GCCCCGGCACCACAGTAATA+AGG | + | chr2_2:10931081-10931100 | None:intergenic | 60.0% | |
| TGCAGAGGTTATGCCTGGCC+AGG | - | chr2_2:10931182-10931201 | Msa0237670:intron | 60.0% | |
| CAGGGTGACTGGAATGGTGC+AGG | - | chr2_2:10931873-10931892 | Msa0237670:CDS | 60.0% | |
| CCATGTGGACCTTGTGGCGA+AGG | + | chr2_2:10932080-10932099 | None:intergenic | 60.0% | |
| CCTTCGCCACAAGGTCCACA+TGG | - | chr2_2:10932077-10932096 | Msa0237670:intron | 60.0% | |
| TGCTGCAGTCTGTGAGGAGC+TGG | - | chr2_2:10932627-10932646 | Msa0237670:CDS | 60.0% | |
| CGGCACTGCTGCAGTCTGTG+AGG | - | chr2_2:10932621-10932640 | Msa0237670:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 10929385 | 10932864 | 10929385 | ID=Msa0237670;Name=Msa0237670 |
| chr2_2 | mRNA | 10929385 | 10932864 | 10929385 | ID=Msa0237670-mRNA-1;Parent=Msa0237670;Name=Msa0237670-mRNA-1;_AED=0.30;_eAED=0.30;_QI=139|0.91|0.92|1|0.91|0.84|13|242|408 |
| chr2_2 | exon | 10929385 | 10929500 | 10929385 | ID=Msa0237670-mRNA-1:exon:4795;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10929534 | 10929799 | 10929534 | ID=Msa0237670-mRNA-1:exon:4794;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10929911 | 10929971 | 10929911 | ID=Msa0237670-mRNA-1:exon:4793;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10930076 | 10930235 | 10930076 | ID=Msa0237670-mRNA-1:exon:4792;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10930336 | 10930373 | 10930336 | ID=Msa0237670-mRNA-1:exon:4791;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10930488 | 10930541 | 10930488 | ID=Msa0237670-mRNA-1:exon:4790;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10930786 | 10930860 | 10930786 | ID=Msa0237670-mRNA-1:exon:4789;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10931046 | 10931174 | 10931046 | ID=Msa0237670-mRNA-1:exon:4788;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10931273 | 10931360 | 10931273 | ID=Msa0237670-mRNA-1:exon:4787;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10931511 | 10931617 | 10931511 | ID=Msa0237670-mRNA-1:exon:4786;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10931858 | 10931950 | 10931858 | ID=Msa0237670-mRNA-1:exon:4785;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10932306 | 10932345 | 10932306 | ID=Msa0237670-mRNA-1:exon:4784;Parent=Msa0237670-mRNA-1 |
| chr2_2 | exon | 10932484 | 10932864 | 10932484 | ID=Msa0237670-mRNA-1:exon:4783;Parent=Msa0237670-mRNA-1 |
| chr2_2 | five_prime_UTR | 10932726 | 10932864 | 10932726 | ID=Msa0237670-mRNA-1:five_prime_utr;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10932484 | 10932725 | 10932484 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10932306 | 10932345 | 10932306 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10931858 | 10931950 | 10931858 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10931511 | 10931617 | 10931511 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10931273 | 10931360 | 10931273 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10931046 | 10931174 | 10931046 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10930786 | 10930860 | 10930786 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10930488 | 10930541 | 10930488 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10930336 | 10930373 | 10930336 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10930076 | 10930235 | 10930076 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10929911 | 10929971 | 10929911 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | CDS | 10929660 | 10929799 | 10929660 | ID=Msa0237670-mRNA-1:cds;Parent=Msa0237670-mRNA-1 |
| chr2_2 | three_prime_UTR | 10929534 | 10929659 | 10929534 | ID=Msa0237670-mRNA-1:three_prime_utr;Parent=Msa0237670-mRNA-1 |
| chr2_2 | three_prime_UTR | 10929385 | 10929500 | 10929385 | ID=Msa0237670-mRNA-1:three_prime_utr;Parent=Msa0237670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
