Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239230 | XP_003594229.1 | 95.122 | 820 | 40 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239230 | sp|Q9SU29|UPL5_ARATH | 45.590 | 805 | 400 | 16 | 31 | 818 | 88 | 871 | 0.0 | 658 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239230 | G7IM29 | 95.122 | 820 | 40 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1597 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0239230 | Msa0317000 | 0.887964 | 8.977308e-73 | -8.615850e-47 |
| Msa0239230 | Msa0367870 | 0.800939 | 1.138840e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239230 | MtrunA17_Chr2g0289941 | 93.014 | 501 | 35 | 0 | 38 | 538 | 12 | 512 | 0.0 | 969 |
| Msa0239230 | MtrunA17_Chr4g0075761 | 54.044 | 816 | 334 | 13 | 34 | 819 | 76 | 880 | 0.0 | 815 |
| Msa0239230 | MtrunA17_Chr2g0289891 | 64.286 | 560 | 180 | 4 | 9 | 556 | 22 | 573 | 0.0 | 701 |
| Msa0239230 | MtrunA17_Chr2g0289911 | 65.725 | 531 | 167 | 5 | 9 | 538 | 17 | 533 | 0.0 | 665 |
| Msa0239230 | MtrunA17_Chr2g0289961 | 76.800 | 375 | 83 | 1 | 164 | 538 | 1 | 371 | 0.0 | 591 |
| Msa0239230 | MtrunA17_Chr2g0289951 | 86.063 | 287 | 40 | 0 | 533 | 819 | 15 | 301 | 1.77e-178 | 514 |
| Msa0239230 | MtrunA17_Chr2g0289901 | 77.673 | 318 | 40 | 1 | 533 | 819 | 15 | 332 | 3.97e-172 | 499 |
| Msa0239230 | MtrunA17_Chr2g0289931 | 88.177 | 203 | 22 | 1 | 555 | 757 | 1 | 201 | 4.44e-120 | 361 |
| Msa0239230 | MtrunA17_Chr2g0289881 | 86.634 | 202 | 27 | 0 | 533 | 734 | 18 | 219 | 1.52e-118 | 358 |
| Msa0239230 | MtrunA17_Chr2g0289921 | 97.590 | 83 | 2 | 0 | 738 | 820 | 1 | 83 | 2.16e-52 | 176 |
| Msa0239230 | MtrunA17_Chr3g0132611 | 32.520 | 369 | 225 | 10 | 464 | 818 | 3303 | 3661 | 2.57e-46 | 180 |
| Msa0239230 | MtrunA17_Chr5g0427791 | 32.791 | 369 | 224 | 10 | 464 | 818 | 3297 | 3655 | 3.27e-46 | 180 |
| Msa0239230 | MtrunA17_Chr2g0289871 | 85.366 | 82 | 12 | 0 | 738 | 819 | 1 | 82 | 3.75e-44 | 153 |
| Msa0239230 | MtrunA17_Chr4g0052551 | 31.250 | 400 | 243 | 10 | 438 | 818 | 3351 | 3737 | 1.15e-43 | 172 |
| Msa0239230 | MtrunA17_Chr4g0052561 | 31.720 | 372 | 224 | 9 | 464 | 818 | 3400 | 3758 | 5.75e-43 | 169 |
| Msa0239230 | MtrunA17_Chr7g0265431 | 26.975 | 367 | 242 | 7 | 457 | 805 | 777 | 1135 | 2.23e-34 | 142 |
| Msa0239230 | MtrunA17_Chr2g0293841 | 26.891 | 357 | 235 | 9 | 464 | 805 | 666 | 1011 | 2.59e-29 | 125 |
| Msa0239230 | MtrunA17_Chr4g0037101 | 23.841 | 302 | 191 | 7 | 546 | 814 | 1581 | 1876 | 3.94e-13 | 73.9 |
| Msa0239230 | MtrunA17_Chr1g0181721 | 24.471 | 331 | 193 | 12 | 489 | 772 | 1179 | 1499 | 6.41e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0239230 | AT4G12570.1 | 45.590 | 805 | 400 | 16 | 31 | 818 | 88 | 871 | 0.0 | 658 |
| Msa0239230 | AT1G55860.1 | 33.521 | 355 | 213 | 8 | 464 | 805 | 3323 | 3667 | 1.58e-43 | 172 |
| Msa0239230 | AT1G70320.1 | 33.239 | 355 | 214 | 8 | 464 | 805 | 3300 | 3644 | 1.81e-42 | 169 |
| Msa0239230 | AT3G53090.1 | 25.344 | 363 | 245 | 7 | 461 | 805 | 775 | 1129 | 2.27e-31 | 132 |
| Msa0239230 | AT3G53090.2 | 25.344 | 363 | 245 | 7 | 461 | 805 | 775 | 1129 | 2.27e-31 | 132 |
| Msa0239230 | AT3G17205.1 | 27.042 | 355 | 237 | 8 | 464 | 805 | 671 | 1016 | 4.45e-30 | 128 |
| Msa0239230 | AT3G17205.3 | 27.042 | 355 | 237 | 8 | 464 | 805 | 671 | 1016 | 4.45e-30 | 128 |
| Msa0239230 | AT3G17205.2 | 27.042 | 355 | 237 | 8 | 464 | 805 | 657 | 1002 | 4.79e-30 | 128 |
| Msa0239230 | AT5G02880.1 | 25.419 | 358 | 213 | 12 | 491 | 805 | 1142 | 1488 | 1.76e-17 | 88.2 |
| Msa0239230 | AT5G02880.2 | 25.496 | 353 | 209 | 12 | 491 | 800 | 1142 | 1483 | 1.02e-16 | 85.9 |
| Msa0239230 | AT4G38600.2 | 24.232 | 293 | 179 | 8 | 546 | 805 | 1498 | 1780 | 7.01e-12 | 70.1 |
Find 161 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATTTCTCTGGCCATTTA+AGG | 0.115956 | 2_2:-13428885 | Msa0239230:CDS |
| TTTGGAGGATGGTCTATTTA+TGG | 0.146723 | 2_2:-13428329 | Msa0239230:CDS |
| GAGAATTTGTTTAGATTTAA+AGG | 0.159500 | 2_2:-13429199 | Msa0239230:CDS |
| TTGATGTTCAATCGGAATTT+TGG | 0.178481 | 2_2:+13429566 | None:intergenic |
| GTGAAACATTTACCAGTTAA+AGG | 0.189154 | 2_2:-13425013 | Msa0239230:CDS |
| GGAAGGTTCTTCTGTTCTTT+TGG | 0.224282 | 2_2:-13425042 | Msa0239230:CDS |
| TCTATAGAGGTAGAGGAATT+AGG | 0.226626 | 2_2:-13426550 | Msa0239230:CDS |
| GAAGACGAGGATGTGAGTTT+TGG | 0.249274 | 2_2:+13429729 | None:intergenic |
| GTACAGGACCGGGTGTAATA+AGG | 0.250734 | 2_2:-13428288 | Msa0239230:CDS |
| TATTGATAGGTCTCAGCTTT+TGG | 0.254029 | 2_2:-13428392 | Msa0239230:CDS |
| ACAAGCTAATTCTACATCTT+TGG | 0.256478 | 2_2:-13428347 | Msa0239230:CDS |
| TTGCAGCTACTATACATTAT+AGG | 0.259455 | 2_2:+13426631 | None:intergenic |
| ATGGTCTATTTATGGAATTC+AGG | 0.261754 | 2_2:-13428321 | Msa0239230:CDS |
| TGCATTAGCTTTGAAGAATA+AGG | 0.267424 | 2_2:-13426743 | Msa0239230:CDS |
| TGTTGCTGATTCCGCGATTA+AGG | 0.279363 | 2_2:-13429229 | Msa0239230:CDS |
| GAACACATCGGCTGCAGTTT+TGG | 0.279369 | 2_2:-13424839 | Msa0239230:CDS |
| CGGCCAATCCAATCCTTAAA+TGG | 0.280470 | 2_2:+13428872 | None:intergenic |
| GTGTATTCTATTCACCATTA+TGG | 0.283954 | 2_2:+13424812 | None:intergenic |
| CATTTGGACATGCCACAAAA+AGG | 0.289782 | 2_2:+13428218 | None:intergenic |
| GATGAGGGCAAGTGATTATT+AGG | 0.294410 | 2_2:+13424944 | None:intergenic |
| TATTAAGTTATTGAGCAAAA+TGG | 0.302892 | 2_2:-13428752 | Msa0239230:CDS |
| CGAAGCATTACCTCTCCTTT+AGG | 0.303054 | 2_2:+13429021 | None:intergenic |
| GATGGGGCCGTTATCAATAA+TGG | 0.330032 | 2_2:-13428673 | Msa0239230:CDS |
| AGTTAAAGGTTTCCATGGTT+TGG | 0.331768 | 2_2:-13424999 | Msa0239230:CDS |
| ATCGTCAGATATCTTGGTTT+TGG | 0.333516 | 2_2:-13426237 | Msa0239230:CDS |
| AATAAGGGAGTGGTTGGTTT+TGG | 0.334881 | 2_2:-13428272 | Msa0239230:CDS |
| TATATTGATTCAGATGCATT+AGG | 0.337168 | 2_2:-13426583 | Msa0239230:CDS |
| ATATTGTTTCTTTGATTCTC+AGG | 0.343235 | 2_2:-13429407 | Msa0239230:CDS |
| CAGAGAAGCTGAAGTACTTT+AGG | 0.352940 | 2_2:+13426776 | None:intergenic |
| CTAAAGTACTTCAGCTTCTC+TGG | 0.353076 | 2_2:-13426775 | Msa0239230:CDS |
| GCGGTGCAAAAGAGATGTTT+TGG | 0.354681 | 2_2:-13428594 | Msa0239230:CDS |
| TAAAGGAGAGGTAATGCTTC+GGG | 0.357338 | 2_2:-13429019 | Msa0239230:CDS |
| GTGGTTGGCCGTGAGAATTT+TGG | 0.373237 | 2_2:+13429767 | None:intergenic |
| GCATCTTTGTTGACGCTTGT+TGG | 0.374257 | 2_2:-13429063 | Msa0239230:CDS |
| AGAATGATCGTCAGATATCT+TGG | 0.374673 | 2_2:-13426243 | Msa0239230:CDS |
| GAAGAGGAACCCTTGATTGC+AGG | 0.374856 | 2_2:-13428802 | Msa0239230:CDS |
| ATGTGATACCTGCTCAGATA+TGG | 0.381018 | 2_2:+13426420 | None:intergenic |
| GCTTTCGTCTAATGTTGTTA+TGG | 0.381557 | 2_2:-13428914 | Msa0239230:CDS |
| ATGCCATTTCTGTTGAAGAT+TGG | 0.387598 | 2_2:-13426297 | Msa0239230:CDS |
| TTCTCTGGCCATTTAAGGAT+TGG | 0.390815 | 2_2:-13428880 | Msa0239230:CDS |
| AAACGATGCAAATCTTCAAT+TGG | 0.399515 | 2_2:-13429481 | Msa0239230:CDS |
| CAGGCTCTGTAGAGGTGAAT+TGG | 0.403050 | 2_2:-13429388 | Msa0239230:CDS |
| CAAGTGATTATTAGGTTCAC+TGG | 0.403588 | 2_2:+13424952 | None:intergenic |
| TAGACCTTGAAGATCTTGAT+TGG | 0.405934 | 2_2:-13426339 | Msa0239230:CDS |
| TGTGTGGCTTTCCACACTTT+AGG | 0.408495 | 2_2:+13429432 | None:intergenic |
| TGTAGAGGTGAATTGGTAAT+TGG | 0.408836 | 2_2:-13429381 | Msa0239230:CDS |
| ATCAACTACTCCTGCAATCA+AGG | 0.409017 | 2_2:+13428792 | None:intergenic |
| AAACGAAACTCACCAGCATT+AGG | 0.409761 | 2_2:+13428178 | None:intergenic |
| TAGTAGCTGCAAGCAAATAT+TGG | 0.414914 | 2_2:-13426620 | Msa0239230:CDS |
| AAAACTTCAACAACACTTCA+AGG | 0.419768 | 2_2:+13429154 | None:intergenic |
| CTTCCAATCTTCAACAGAAA+TGG | 0.422282 | 2_2:+13426294 | None:intergenic |
| TTGTCGTGAATAGTAAGAAC+AGG | 0.427749 | 2_2:-13426486 | Msa0239230:CDS |
| AACGATTCATCATTTAAGTC+GGG | 0.427898 | 2_2:+13428430 | None:intergenic |
| AAACCATGGAAACCTTTAAC+TGG | 0.431185 | 2_2:+13425001 | None:intergenic |
| ATTAATCGTTGATGTTCAAT+CGG | 0.439099 | 2_2:+13429558 | None:intergenic |
| ATGCCTCCTGCATTCAAAAT+CGG | 0.446824 | 2_2:+13428471 | None:intergenic |
| GATATGAGATGCTTATTGAT+AGG | 0.458475 | 2_2:-13428405 | Msa0239230:CDS |
| TACAGGACCGGGTGTAATAA+GGG | 0.460118 | 2_2:-13428287 | Msa0239230:CDS |
| TCAAGTCATGGAGGATTGCT+TGG | 0.463756 | 2_2:-13428719 | Msa0239230:CDS |
| GTGTCAGGAAATATTTAATC+CGG | 0.466705 | 2_2:-13428248 | Msa0239230:CDS |
| CTAAAGGAGAGGTAATGCTT+CGG | 0.467670 | 2_2:-13429020 | Msa0239230:CDS |
| GTTAGCTTTCAGAATCCTAA+AGG | 0.469307 | 2_2:-13429036 | Msa0239230:CDS |
| GACTTAAATGATGAATCGTT+GGG | 0.471720 | 2_2:-13428427 | Msa0239230:CDS |
| TATGAACTGTCCCACGGGCG+AGG | 0.473328 | 2_2:-13428938 | Msa0239230:CDS |
| ATATGTGATACAATACCTTC+AGG | 0.478355 | 2_2:+13428629 | None:intergenic |
| GAATGAGGAGGGTACAGGAC+CGG | 0.481216 | 2_2:-13428299 | Msa0239230:CDS |
| TGGCCATTTAAGGATTGGAT+TGG | 0.482499 | 2_2:-13428875 | Msa0239230:CDS |
| GATGCAAATCTTCAATTGGT+TGG | 0.485465 | 2_2:-13429477 | Msa0239230:CDS |
| AGCAATCCTCCATGACTTGA+AGG | 0.486669 | 2_2:+13428722 | None:intergenic |
| TGTGAAATCCATATCTGAGC+AGG | 0.488944 | 2_2:-13426428 | Msa0239230:CDS |
| ATGATAGCCATAGAAGAATA+CGG | 0.494700 | 2_2:+13424890 | None:intergenic |
| CGACTTAAATGATGAATCGT+TGG | 0.494856 | 2_2:-13428428 | Msa0239230:CDS |
| CATTTCTGTTGAAGATTGGA+AGG | 0.495021 | 2_2:-13426293 | Msa0239230:CDS |
| GCATCCAATCAAGATCTTCA+AGG | 0.496570 | 2_2:+13426335 | None:intergenic |
| AGCTAATTCTACATCTTTGG+AGG | 0.497515 | 2_2:-13428344 | Msa0239230:CDS |
| AATGAGGAGGGTACAGGACC+GGG | 0.498583 | 2_2:-13428298 | Msa0239230:CDS |
| ATGGGGCCGTTATCAATAAT+GGG | 0.505059 | 2_2:-13428672 | Msa0239230:CDS |
| CTCGTCTTCGAAGATGAAAA+AGG | 0.505627 | 2_2:-13429715 | Msa0239230:CDS |
| AAAGTGATTGAGCTCTGCTC+TGG | 0.508139 | 2_2:-13426520 | Msa0239230:CDS |
| ATCGGATGGTGCTTGCTGCT+CGG | 0.508758 | 2_2:+13428852 | None:intergenic |
| AATAGAATACACCTCCGATC+TGG | 0.509551 | 2_2:-13424801 | Msa0239230:three_prime_UTR |
| GTGATTGAGCTCTGCTCTGG+TGG | 0.509683 | 2_2:-13426517 | Msa0239230:CDS |
| AATTGGTAATTGGTGCTTCG+AGG | 0.514472 | 2_2:-13429371 | Msa0239230:CDS |
| TGATAGCCATAGAAGAATAC+GGG | 0.522042 | 2_2:+13424891 | None:intergenic |
| GTTAACAAGAAACATGGAAA+AGG | 0.523837 | 2_2:-13428697 | Msa0239230:CDS |
| ATGAACTGTCCCACGGGCGA+GGG | 0.525841 | 2_2:-13428937 | Msa0239230:CDS |
| TTACCAGTTAAAGGTTTCCA+TGG | 0.527218 | 2_2:-13425004 | Msa0239230:CDS |
| GGACGTCTGCCTTCAAGTCA+TGG | 0.528692 | 2_2:-13428731 | Msa0239230:CDS |
| CAACGATTCATCATTTAAGT+CGG | 0.528714 | 2_2:+13428429 | None:intergenic |
| TTCAGGAATGAGGAGGGTAC+AGG | 0.532617 | 2_2:-13428304 | Msa0239230:CDS |
| GGATTTGCAAATGAATAGAC+AGG | 0.533898 | 2_2:+13424973 | None:intergenic |
| AGACGAAAGCCCCTCGCCCG+TGG | 0.535162 | 2_2:+13428927 | None:intergenic |
| CTGCAAGCAAATATTGGAGA+TGG | 0.545154 | 2_2:-13426614 | Msa0239230:CDS |
| AAGAAACATGGAAAAGGTGA+TGG | 0.545226 | 2_2:-13428691 | Msa0239230:CDS |
| ATTTATGGAATTCAGGAATG+AGG | 0.547177 | 2_2:-13428314 | Msa0239230:CDS |
| AGAAACATGGAAAAGGTGAT+GGG | 0.547351 | 2_2:-13428690 | Msa0239230:CDS |
| AATTCTACATCTTTGGAGGA+TGG | 0.548158 | 2_2:-13428340 | Msa0239230:CDS |
| GCTATCATGCAAGATCGCCT+TGG | 0.551704 | 2_2:-13424875 | Msa0239230:CDS |
| ATCTTGATTGGATGCTGCAT+GGG | 0.553008 | 2_2:-13426327 | Msa0239230:CDS |
| CTGATATTATATCTGGCTCA+AGG | 0.554715 | 2_2:-13426381 | Msa0239230:CDS |
| TAGAAACAAGTGTGAGATGA+GGG | 0.555353 | 2_2:+13424929 | None:intergenic |
| TATGGAAATTCCTTCACTGT+TGG | 0.556052 | 2_2:-13429286 | Msa0239230:CDS |
| AATTCTTCGTCCGCATGATG+TGG | 0.556931 | 2_2:-13429665 | Msa0239230:CDS |
| TCTAGGAGCACGAATCACTA+AGG | 0.558741 | 2_2:+13429632 | None:intergenic |
| TTGATTCTCAGGCTCTGTAG+AGG | 0.560074 | 2_2:-13429396 | Msa0239230:CDS |
| AGACCACCCATTATTGATAA+CGG | 0.560079 | 2_2:+13428666 | None:intergenic |
| CTGAAGTACTTTAGGTGCAG+AGG | 0.562281 | 2_2:+13426784 | None:intergenic |
| TGAACTGTCCCACGGGCGAG+GGG | 0.572948 | 2_2:-13428936 | Msa0239230:CDS |
| TGCTTGGTTAACAAGAAACA+TGG | 0.575870 | 2_2:-13428703 | Msa0239230:CDS |
| ACAAAGATGCAAAACTATCC+CGG | 0.576807 | 2_2:+13429076 | None:intergenic |
| TTGCACTATTTGTTACGAAG+AGG | 0.578655 | 2_2:-13428818 | Msa0239230:CDS |
| GAAGAATGTCAGCAGAGCAA+AGG | 0.580083 | 2_2:-13425063 | Msa0239230:CDS |
| TTTGAAGAATAAGGTGCATG+TGG | 0.582576 | 2_2:-13426734 | Msa0239230:CDS |
| TATAATATCAGCAAAACCCT+CGG | 0.583000 | 2_2:+13426393 | None:intergenic |
| CTGAGTATGAACTGTCCCAC+GGG | 0.584584 | 2_2:-13428943 | Msa0239230:CDS |
| CATCAACGATTAATTTACAA+AGG | 0.584745 | 2_2:-13429549 | Msa0239230:CDS |
| GACGAAAGCCCCTCGCCCGT+GGG | 0.585370 | 2_2:+13428928 | None:intergenic |
| TCATTATATTATAATCCTGA+AGG | 0.585887 | 2_2:-13428644 | Msa0239230:CDS |
| GTTCTTGAGTAATGATTCCA+AGG | 0.588823 | 2_2:+13424858 | None:intergenic |
| AGATCGCAGATGAGTTGTTG+AGG | 0.590098 | 2_2:-13428975 | Msa0239230:CDS |
| TGGCATGTCCAAATGACCGC+AGG | 0.590357 | 2_2:-13428210 | Msa0239230:CDS |
| GTGAATTGCTTAGAAGGGCA+CGG | 0.596229 | 2_2:-13429131 | Msa0239230:CDS |
| GACCGGGTGTAATAAGGGAG+TGG | 0.596731 | 2_2:-13428282 | Msa0239230:CDS |
| CGAAGAATACTGATGATCAT+CGG | 0.599199 | 2_2:-13428519 | Msa0239230:CDS |
| GATCTTGATTGGATGCTGCA+TGG | 0.602801 | 2_2:-13426328 | Msa0239230:CDS |
| CAAAGAAACAATATAATGTG+TGG | 0.602867 | 2_2:+13429416 | None:intergenic |
| GGGTGTAATAAGGGAGTGGT+TGG | 0.603484 | 2_2:-13428278 | Msa0239230:CDS |
| TGATTGAGCTCTGCTCTGGT+GGG | 0.604613 | 2_2:-13426516 | Msa0239230:CDS |
| CTTTCAGAATCCTAAAGGAG+AGG | 0.605822 | 2_2:-13429031 | Msa0239230:CDS |
| TAAAGAGCTACCAACAGTGA+AGG | 0.606930 | 2_2:+13429276 | None:intergenic |
| AACCACTCCCTTATTACACC+CGG | 0.610035 | 2_2:+13428280 | None:intergenic |
| GATTGAGCTCTGCTCTGGTG+GGG | 0.612244 | 2_2:-13426515 | Msa0239230:CDS |
| AATGTCAGCAGAGCAAAGGA+AGG | 0.613812 | 2_2:-13425059 | Msa0239230:CDS |
| AAAACAACTTCTAACCAGAT+CGG | 0.616347 | 2_2:+13424787 | None:intergenic |
| ACCAACCACCAAAATTCTCA+CGG | 0.619816 | 2_2:-13429775 | Msa0239230:CDS |
| AGAATACTGATGATCATCGG+TGG | 0.624663 | 2_2:-13428516 | Msa0239230:CDS |
| TCAACTACTCCTGCAATCAA+GGG | 0.626894 | 2_2:+13428793 | None:intergenic |
| ACGATTCATCATTTAAGTCG+GGG | 0.627603 | 2_2:+13428431 | None:intergenic |
| GAATACTGATGATCATCGGT+GGG | 0.627853 | 2_2:-13428515 | Msa0239230:CDS |
| TATGGAATTCAGGAATGAGG+AGG | 0.629074 | 2_2:-13428311 | Msa0239230:CDS |
| GAACAGAGTCTCTGCGAATG+CGG | 0.633200 | 2_2:-13429510 | Msa0239230:CDS |
| ATGGAATTCAGGAATGAGGA+GGG | 0.639277 | 2_2:-13428310 | Msa0239230:CDS |
| AGGTAGAGGAATTAGGACAC+AGG | 0.641055 | 2_2:-13426543 | Msa0239230:CDS |
| ATAGAAACAAGTGTGAGATG+AGG | 0.642212 | 2_2:+13424928 | None:intergenic |
| TTGAAGAATAAGGTGCATGT+GGG | 0.649815 | 2_2:-13426733 | Msa0239230:CDS |
| TCTGAGTATGAACTGTCCCA+CGG | 0.650606 | 2_2:-13428944 | Msa0239230:CDS |
| TCTCACAAAATCCTTAATCG+CGG | 0.657872 | 2_2:+13429218 | None:intergenic |
| GTACAGCGTGTCCTAAAGTG+TGG | 0.670917 | 2_2:-13429443 | Msa0239230:CDS |
| ATAGACAGGAATCCAAACCA+TGG | 0.672195 | 2_2:+13424987 | None:intergenic |
| AAAGGAGAGGTAATGCTTCG+GGG | 0.674115 | 2_2:-13429018 | Msa0239230:CDS |
| TGTTACTGTTCCACATCATG+CGG | 0.684460 | 2_2:+13429655 | None:intergenic |
| GAAACATGGAAAAGGTGATG+GGG | 0.688263 | 2_2:-13428689 | Msa0239230:CDS |
| ACAACTTCTAACCAGATCGG+AGG | 0.697006 | 2_2:+13424790 | None:intergenic |
| GATAGCCATAGAAGAATACG+GGG | 0.703482 | 2_2:+13424892 | None:intergenic |
| CGTCTGCCTTCAAGTCATGG+AGG | 0.709728 | 2_2:-13428728 | Msa0239230:CDS |
| GGGCCGTTATCAATAATGGG+TGG | 0.710165 | 2_2:-13428669 | Msa0239230:CDS |
| TGTCGTGAATAGTAAGAACA+GGG | 0.711545 | 2_2:-13426485 | Msa0239230:CDS |
| ATCATTACTCAAGAACACAT+CGG | 0.711904 | 2_2:-13424851 | Msa0239230:CDS |
| AAGGCACATACCAAGTATCG+TGG | 0.712185 | 2_2:-13426274 | Msa0239230:CDS |
| CACATATCTAAGCTCCATAG+CGG | 0.719807 | 2_2:-13428613 | Msa0239230:CDS |
| ATAGCCATAGAAGAATACGG+GGG | 0.792007 | 2_2:+13424893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATACTATTTTTTTTATC+TGG | - | chr2_2:13427240-13427259 | Msa0239230:intron | 15.0% |
| !!! | TCATACTATTTTTTTTATCT+GGG | - | chr2_2:13427241-13427260 | Msa0239230:intron | 15.0% |
| !! | TTATAAATTGAGTTCAAATA+TGG | - | chr2_2:13429107-13429126 | Msa0239230:CDS | 15.0% |
| !!! | ATTATAACAATGATTTTAAC+AGG | + | chr2_2:13429184-13429203 | None:intergenic | 15.0% |
| !! | TATTCTGTTAAAAAAAAACT+TGG | - | chr2_2:13429462-13429481 | Msa0239230:CDS | 15.0% |
| !!! | TTTTTCTGTTTTCATGTTTA+TGG | - | chr2_2:13425254-13425273 | Msa0239230:intron | 20.0% |
| !!! | GAGAATTTGTTTAGATTTAA+AGG | - | chr2_2:13425359-13425378 | Msa0239230:intron | 20.0% |
| !! | TATTAAGTTATTGAGCAAAA+TGG | - | chr2_2:13425806-13425825 | Msa0239230:intron | 20.0% |
| !! | TCATTATATTATAATCCTGA+AGG | - | chr2_2:13425914-13425933 | Msa0239230:intron | 20.0% |
| !! | GAATACAATAAAAATGTCAT+TGG | + | chr2_2:13426466-13426485 | None:intergenic | 20.0% |
| !! | ACAAAATGATAGTATTTCTT+AGG | - | chr2_2:13426528-13426547 | Msa0239230:CDS | 20.0% |
| !! | ATGAAAAAACAGAAAGTTAA+TGG | + | chr2_2:13426778-13426797 | None:intergenic | 20.0% |
| !!! | ATTAACTTTCTGTTTTTTCA+TGG | - | chr2_2:13426777-13426796 | Msa0239230:CDS | 20.0% |
| !!! | CATACTATTTTTTTTATCTG+GGG | - | chr2_2:13427242-13427261 | Msa0239230:intron | 20.0% |
| !!! | ATACTATTTTTTTTATCTGG+GGG | - | chr2_2:13427243-13427262 | Msa0239230:intron | 20.0% |
| !!! | ATTTTAAAAAAGCAGGAAAA+GGG | + | chr2_2:13428414-13428433 | None:intergenic | 20.0% |
| !!! | AATTTTAAAAAAGCAGGAAA+AGG | + | chr2_2:13428415-13428434 | None:intergenic | 20.0% |
| !! | TAAAAAATTAAAGATAGCAG+TGG | - | chr2_2:13428531-13428550 | Msa0239230:CDS | 20.0% |
| !! | AACTTGAACCTAAATTAATA+GGG | + | chr2_2:13428766-13428785 | None:intergenic | 20.0% |
| !! | TAACTTGAACCTAAATTAAT+AGG | + | chr2_2:13428767-13428786 | None:intergenic | 20.0% |
| !! | AACTTAATGGAAAAAATTCT+TGG | + | chr2_2:13429041-13429060 | None:intergenic | 20.0% |
| !!! | CTATTTTAATTAAAAGCATG+TGG | - | chr2_2:13429336-13429355 | Msa0239230:CDS | 20.0% |
| !! | TCAAAAAAGAATCATTTCAA+AGG | + | chr2_2:13429373-13429392 | None:intergenic | 20.0% |
| !! | TAACATCATTTAAATTTGCA+AGG | - | chr2_2:13429406-13429425 | Msa0239230:CDS | 20.0% |
| ! | ATTAATCGTTGATGTTCAAT+CGG | + | chr2_2:13425003-13425022 | None:intergenic | 25.0% |
| ! | CATCAACGATTAATTTACAA+AGG | - | chr2_2:13425009-13425028 | Msa0239230:CDS | 25.0% |
| ! | CAAAGAAACAATATAATGTG+TGG | + | chr2_2:13425145-13425164 | None:intergenic | 25.0% |
| !! | ATATTGTTTCTTTGATTCTC+AGG | - | chr2_2:13425151-13425170 | Msa0239230:intron | 25.0% |
| !! | ATGGATTTTGTTAATTTCTC+TGG | - | chr2_2:13425663-13425682 | Msa0239230:intron | 25.0% |
| ! | AGTGCAATTCAAAAATTCAT+CGG | + | chr2_2:13425727-13425746 | None:intergenic | 25.0% |
| ! | AAGTCTGATGTTAATAAAGT+AGG | + | chr2_2:13426618-13426637 | None:intergenic | 25.0% |
| ! | TTATATTTCAGGAGAAAAAG+AGG | + | chr2_2:13426819-13426838 | None:intergenic | 25.0% |
| ! | AGGATATGAAGTTATATTTC+AGG | + | chr2_2:13426830-13426849 | None:intergenic | 25.0% |
| ! | TGAAATATAACTTCATATCC+TGG | - | chr2_2:13426829-13426848 | Msa0239230:intron | 25.0% |
| ! | TGATTAAACTCACCAAAAAT+AGG | - | chr2_2:13426862-13426881 | Msa0239230:intron | 25.0% |
| ! | GATTAAACTCACCAAAAATA+GGG | - | chr2_2:13426863-13426882 | Msa0239230:intron | 25.0% |
| ! | CAATTACCATAATCATTAGA+TGG | + | chr2_2:13426981-13427000 | None:intergenic | 25.0% |
| ! | AATTACTCTTATGTGTTCAA+GGG | - | chr2_2:13427010-13427029 | Msa0239230:intron | 25.0% |
| !!! | TTCTAAAGTTGAAAGTCATT+AGG | + | chr2_2:13427149-13427168 | None:intergenic | 25.0% |
| !!! | TACTATTTTTTTTATCTGGG+GGG | - | chr2_2:13427244-13427263 | Msa0239230:intron | 25.0% |
| ! | TGTTAAAGTGGAATTATGAT+GGG | - | chr2_2:13427475-13427494 | Msa0239230:intron | 25.0% |
| ! | TATTAGTGTTACATAATCCA+GGG | + | chr2_2:13427517-13427536 | None:intergenic | 25.0% |
| ! | ATATTAGTGTTACATAATCC+AGG | + | chr2_2:13427518-13427537 | None:intergenic | 25.0% |
| ! | TATTAGTGTTACATAATCCA+GGG | + | chr2_2:13427517-13427536 | None:intergenic | 25.0% |
| ! | ATATTAGTGTTACATAATCC+AGG | + | chr2_2:13427518-13427537 | None:intergenic | 25.0% |
| ! | AGCGAGTTAAATTAAACAAT+GGG | + | chr2_2:13427619-13427638 | None:intergenic | 25.0% |
| !!! | TATATTGATTCAGATGCATT+AGG | - | chr2_2:13427975-13427994 | Msa0239230:intron | 25.0% |
| !!! | TTTTAAAAAAGCAGGAAAAG+GGG | + | chr2_2:13428413-13428432 | None:intergenic | 25.0% |
| !!! | CCAAAGAATTTTAAAAAAGC+AGG | + | chr2_2:13428421-13428440 | None:intergenic | 25.0% |
| !!! | CCTGCTTTTTTAAAATTCTT+TGG | - | chr2_2:13428418-13428437 | Msa0239230:CDS | 25.0% |
| ! | ATAGAAGTAGATTTCAAAAG+TGG | + | chr2_2:13428676-13428695 | None:intergenic | 25.0% |
| !!! | TTTTCTAGCCCTATTAATTT+AGG | - | chr2_2:13428755-13428774 | Msa0239230:CDS | 25.0% |
| ! | AAAAACATGTTACTATTTGG+AGG | + | chr2_2:13428835-13428854 | None:intergenic | 25.0% |
| ! | GTCAAAAACATGTTACTATT+TGG | + | chr2_2:13428838-13428857 | None:intergenic | 25.0% |
| !!! | GAATTTTTTCCATTAAGTTG+TGG | - | chr2_2:13429042-13429061 | Msa0239230:CDS | 25.0% |
| ! | ATAACAGAGCATGATATTTA+TGG | + | chr2_2:13429091-13429110 | None:intergenic | 25.0% |
| ! | ATGTAAATATGGCTACATTA+TGG | + | chr2_2:13429152-13429171 | None:intergenic | 25.0% |
| ! | GGATTCTGAATATGTAAATA+TGG | + | chr2_2:13429163-13429182 | None:intergenic | 25.0% |
| ! | TATTGTATGTGAACATAAGA+TGG | + | chr2_2:13429247-13429266 | None:intergenic | 25.0% |
| !!! | GATTCAACTGTTTTTTCTCT+AGG | + | chr2_2:13424946-13424965 | None:intergenic | 30.0% |
| ! | TTGATGTTCAATCGGAATTT+TGG | + | chr2_2:13424995-13425014 | None:intergenic | 30.0% |
| AAACGATGCAAATCTTCAAT+TGG | - | chr2_2:13425077-13425096 | Msa0239230:intron | 30.0% | |
| TTTAAAGGACAAAAAGTTGC+AGG | - | chr2_2:13425374-13425393 | Msa0239230:intron | 30.0% | |
| TTAAAGGACAAAAAGTTGCA+GGG | - | chr2_2:13425375-13425394 | Msa0239230:intron | 30.0% | |
| AAAACTTCAACAACACTTCA+AGG | + | chr2_2:13425407-13425426 | None:intergenic | 30.0% | |
| !! | AGTTTTGTGAATTGCTTAGA+AGG | - | chr2_2:13425421-13425440 | Msa0239230:intron | 30.0% |
| ! | GTTTTGTGAATTGCTTAGAA+GGG | - | chr2_2:13425422-13425441 | Msa0239230:intron | 30.0% |
| TTAATTTCTCTGGCCATTTA+AGG | - | chr2_2:13425673-13425692 | Msa0239230:intron | 30.0% | |
| CAATTCAAAAATTCATCGGA+TGG | + | chr2_2:13425723-13425742 | None:intergenic | 30.0% | |
| GTTAACAAGAAACATGGAAA+AGG | - | chr2_2:13425861-13425880 | Msa0239230:intron | 30.0% | |
| ATATGTGATACAATACCTTC+AGG | + | chr2_2:13425932-13425951 | None:intergenic | 30.0% | |
| AACGATTCATCATTTAAGTC+GGG | + | chr2_2:13426131-13426150 | None:intergenic | 30.0% | |
| CAACGATTCATCATTTAAGT+CGG | + | chr2_2:13426132-13426151 | None:intergenic | 30.0% | |
| GACTTAAATGATGAATCGTT+GGG | - | chr2_2:13426131-13426150 | Msa0239230:intron | 30.0% | |
| GATATGAGATGCTTATTGAT+AGG | - | chr2_2:13426153-13426172 | Msa0239230:intron | 30.0% | |
| ACAAGCTAATTCTACATCTT+TGG | - | chr2_2:13426211-13426230 | Msa0239230:intron | 30.0% | |
| ATGGTCTATTTATGGAATTC+AGG | - | chr2_2:13426237-13426256 | Msa0239230:CDS | 30.0% | |
| ATTTATGGAATTCAGGAATG+AGG | - | chr2_2:13426244-13426263 | Msa0239230:CDS | 30.0% | |
| GTGTCAGGAAATATTTAATC+CGG | - | chr2_2:13426310-13426329 | Msa0239230:CDS | 30.0% | |
| ATGAAAATACTCCAGTTGTA+TGG | + | chr2_2:13426441-13426460 | None:intergenic | 30.0% | |
| GATAGTATTTCTTAGGAGTT+AGG | - | chr2_2:13426535-13426554 | Msa0239230:CDS | 30.0% | |
| GATAGTAGAATAGTGTTCAA+GGG | - | chr2_2:13426557-13426576 | Msa0239230:CDS | 30.0% | |
| TAACCTCAACTAAACCATTA+GGG | + | chr2_2:13426702-13426721 | None:intergenic | 30.0% | |
| TGATTATGGTAATTGCTCTT+TGG | - | chr2_2:13426986-13427005 | Msa0239230:intron | 30.0% | |
| CAATTACTCTTATGTGTTCA+AGG | - | chr2_2:13427009-13427028 | Msa0239230:intron | 30.0% | |
| TTAGACATAGCAAACTAGTA+GGG | + | chr2_2:13427074-13427093 | None:intergenic | 30.0% | |
| AAAGTCATTAGGATAAGGTT+GGG | + | chr2_2:13427138-13427157 | None:intergenic | 30.0% | |
| AGTTGAAAGTCATTAGGATA+AGG | + | chr2_2:13427143-13427162 | None:intergenic | 30.0% | |
| TTTAGAAGTGAATGTTCGTT+GGG | - | chr2_2:13427162-13427181 | Msa0239230:intron | 30.0% | |
| AACTTTGAATGTCAAGAGTT+TGG | + | chr2_2:13427203-13427222 | None:intergenic | 30.0% | |
| !!! | ACTATTTTTTTTATCTGGGG+GGG | - | chr2_2:13427245-13427264 | Msa0239230:intron | 30.0% |
| ! | AATTCAACTGATTTCAGCTA+AGG | - | chr2_2:13427274-13427293 | Msa0239230:intron | 30.0% |
| ! | ATTCAACTGATTTCAGCTAA+GGG | - | chr2_2:13427275-13427294 | Msa0239230:intron | 30.0% |
| ! | TTAGTATTTTTCTCCTTGTG+AGG | + | chr2_2:13427332-13427351 | None:intergenic | 30.0% |
| TGAAATGCATGAAATGAGAT+AGG | - | chr2_2:13427438-13427457 | Msa0239230:intron | 30.0% | |
| GTGTTAAAGTGGAATTATGA+TGG | - | chr2_2:13427474-13427493 | Msa0239230:intron | 30.0% | |
| CAGCGAGTTAAATTAAACAA+TGG | + | chr2_2:13427620-13427639 | None:intergenic | 30.0% | |
| ! | CATTGTTTAATTTAACTCGC+TGG | - | chr2_2:13427618-13427637 | Msa0239230:intron | 30.0% |
| !! | TGCATTAGCTTTGAAGAATA+AGG | - | chr2_2:13427815-13427834 | Msa0239230:intron | 30.0% |
| TTGCAGCTACTATACATTAT+AGG | + | chr2_2:13427930-13427949 | None:intergenic | 30.0% | |
| TATAATATCAGCAAAACCCT+CGG | + | chr2_2:13428168-13428187 | None:intergenic | 30.0% | |
| ! | GGTTTTGCTGATATTATATC+TGG | - | chr2_2:13428170-13428189 | Msa0239230:intron | 30.0% |
| TTTAAAAAAGCAGGAAAAGG+GGG | + | chr2_2:13428412-13428431 | None:intergenic | 30.0% | |
| CAATTTCCCCCTATATAAAA+AGG | - | chr2_2:13428490-13428509 | Msa0239230:CDS | 30.0% | |
| ! | AGGGACTACCTTTTTATATA+GGG | + | chr2_2:13428501-13428520 | None:intergenic | 30.0% |
| TAACAAGTAATCAGGATTAG+AGG | + | chr2_2:13428606-13428625 | None:intergenic | 30.0% | |
| ATAATTCCGTCATGAAAATG+GGG | + | chr2_2:13428634-13428653 | None:intergenic | 30.0% | |
| CATAATTCCGTCATGAAAAT+GGG | + | chr2_2:13428635-13428654 | None:intergenic | 30.0% | |
| ACATAATTCCGTCATGAAAA+TGG | + | chr2_2:13428636-13428655 | None:intergenic | 30.0% | |
| AAAGTGGTTTATGTGAAACA+AGG | + | chr2_2:13428660-13428679 | None:intergenic | 30.0% | |
| !!! | TATGGTATTTTAGTGTTGAG+TGG | + | chr2_2:13429134-13429153 | None:intergenic | 30.0% |
| GTGAAACATTTACCAGTTAA+AGG | - | chr2_2:13429545-13429564 | Msa0239230:CDS | 30.0% | |
| ATGATAGCCATAGAAGAATA+CGG | + | chr2_2:13429671-13429690 | None:intergenic | 30.0% | |
| ATCATTACTCAAGAACACAT+CGG | - | chr2_2:13429707-13429726 | Msa0239230:CDS | 30.0% | |
| GTGTATTCTATTCACCATTA+TGG | + | chr2_2:13429749-13429768 | None:intergenic | 30.0% | |
| AAAACAACTTCTAACCAGAT+CGG | + | chr2_2:13429774-13429793 | None:intergenic | 30.0% | |
| GATGCAAATCTTCAATTGGT+TGG | - | chr2_2:13425081-13425100 | Msa0239230:intron | 35.0% | |
| ! | TGTAGAGGTGAATTGGTAAT+TGG | - | chr2_2:13425177-13425196 | Msa0239230:intron | 35.0% |
| TATGGAAATTCCTTCACTGT+TGG | - | chr2_2:13425272-13425291 | Msa0239230:intron | 35.0% | |
| TCTCACAAAATCCTTAATCG+CGG | + | chr2_2:13425343-13425362 | None:intergenic | 35.0% | |
| !!! | ATCCTCTGTATGTTTTTTGC+CGG | - | chr2_2:13425463-13425482 | Msa0239230:intron | 35.0% |
| ACAAAGATGCAAAACTATCC+CGG | + | chr2_2:13425485-13425504 | None:intergenic | 35.0% | |
| !! | GTTAGCTTTCAGAATCCTAA+AGG | - | chr2_2:13425522-13425541 | Msa0239230:intron | 35.0% |
| ! | AGATGAGTTGTTGAGGTTTT+TGG | - | chr2_2:13425590-13425609 | Msa0239230:intron | 35.0% |
| GCTTTCGTCTAATGTTGTTA+TGG | - | chr2_2:13425644-13425663 | Msa0239230:intron | 35.0% | |
| ! | TTGCACTATTTGTTACGAAG+AGG | - | chr2_2:13425740-13425759 | Msa0239230:intron | 35.0% |
| TGCTTGGTTAACAAGAAACA+TGG | - | chr2_2:13425855-13425874 | Msa0239230:intron | 35.0% | |
| AAGAAACATGGAAAAGGTGA+TGG | - | chr2_2:13425867-13425886 | Msa0239230:intron | 35.0% | |
| AGAAACATGGAAAAGGTGAT+GGG | - | chr2_2:13425868-13425887 | Msa0239230:intron | 35.0% | |
| AGACCACCCATTATTGATAA+CGG | + | chr2_2:13425895-13425914 | None:intergenic | 35.0% | |
| CGAAGAATACTGATGATCAT+CGG | - | chr2_2:13426039-13426058 | Msa0239230:intron | 35.0% | |
| ACGATTCATCATTTAAGTCG+GGG | + | chr2_2:13426130-13426149 | None:intergenic | 35.0% | |
| CGACTTAAATGATGAATCGT+TGG | - | chr2_2:13426130-13426149 | Msa0239230:intron | 35.0% | |
| ! | TATTGATAGGTCTCAGCTTT+TGG | - | chr2_2:13426166-13426185 | Msa0239230:intron | 35.0% |
| AGCTAATTCTACATCTTTGG+AGG | - | chr2_2:13426214-13426233 | Msa0239230:intron | 35.0% | |
| ! | AATTCTACATCTTTGGAGGA+TGG | - | chr2_2:13426218-13426237 | Msa0239230:intron | 35.0% |
| TTTGGAGGATGGTCTATTTA+TGG | - | chr2_2:13426229-13426248 | Msa0239230:intron | 35.0% | |
| ATTTGGACATGCCACAAAAA+GGG | + | chr2_2:13426342-13426361 | None:intergenic | 35.0% | |
| CATTAGGAAAAAATCTCCTG+CGG | + | chr2_2:13426367-13426386 | None:intergenic | 35.0% | |
| !!! | AGGAGATTTTTTCCTAATGC+TGG | - | chr2_2:13426368-13426387 | Msa0239230:CDS | 35.0% |
| GGATAGTAGAATAGTGTTCA+AGG | - | chr2_2:13426556-13426575 | Msa0239230:CDS | 35.0% | |
| CTAACCTCAACTAAACCATT+AGG | + | chr2_2:13426703-13426722 | None:intergenic | 35.0% | |
| !! | AGCTCATTTATTTCTGTACC+AGG | - | chr2_2:13426721-13426740 | Msa0239230:CDS | 35.0% |
| TTGGTGAGTTTAATCACCTA+AGG | + | chr2_2:13426858-13426877 | None:intergenic | 35.0% | |
| TAAACTCACCAAAAATAGGG+AGG | - | chr2_2:13426866-13426885 | Msa0239230:intron | 35.0% | |
| CTCTGTCCATCTAATGATTA+TGG | - | chr2_2:13426972-13426991 | Msa0239230:intron | 35.0% | |
| CTTAGACATAGCAAACTAGT+AGG | + | chr2_2:13427075-13427094 | None:intergenic | 35.0% | |
| GAAAGTCATTAGGATAAGGT+TGG | + | chr2_2:13427139-13427158 | None:intergenic | 35.0% | |
| ! | CTTTAGAAGTGAATGTTCGT+TGG | - | chr2_2:13427161-13427180 | Msa0239230:intron | 35.0% |
| GATTTCAGCTAAGGGATTAA+AGG | - | chr2_2:13427283-13427302 | Msa0239230:intron | 35.0% | |
| TAAGGGATTAAAGGAGTTGA+GGG | - | chr2_2:13427292-13427311 | Msa0239230:intron | 35.0% | |
| ATGCATGAAATGAGATAGGA+AGG | - | chr2_2:13427442-13427461 | Msa0239230:intron | 35.0% | |
| TGCATGAAATGAGATAGGAA+GGG | - | chr2_2:13427443-13427462 | Msa0239230:intron | 35.0% | |
| ! | TTACATAATCCAGGGTTGAT+TGG | + | chr2_2:13427509-13427528 | None:intergenic | 35.0% |
| TCTTATCATTTGCATAACCC+TGG | - | chr2_2:13427539-13427558 | Msa0239230:intron | 35.0% | |
| TTAATTTAACTCGCTGGATC+AGG | - | chr2_2:13427624-13427643 | Msa0239230:intron | 35.0% | |
| TTTGAAGAATAAGGTGCATG+TGG | - | chr2_2:13427824-13427843 | Msa0239230:intron | 35.0% | |
| TTGAAGAATAAGGTGCATGT+GGG | - | chr2_2:13427825-13427844 | Msa0239230:intron | 35.0% | |
| !!! | TCGTGTGTTTTTCAAGCAAT+TGG | - | chr2_2:13427860-13427879 | Msa0239230:intron | 35.0% |
| TAGTAGCTGCAAGCAAATAT+TGG | - | chr2_2:13427938-13427957 | Msa0239230:intron | 35.0% | |
| ! | AGGACTGACATTTTCTATAG+AGG | - | chr2_2:13427995-13428014 | Msa0239230:intron | 35.0% |
| ! | GACATTTTCTATAGAGGTAG+AGG | - | chr2_2:13428001-13428020 | Msa0239230:intron | 35.0% |
| TCTATAGAGGTAGAGGAATT+AGG | - | chr2_2:13428008-13428027 | Msa0239230:intron | 35.0% | |
| TTGTCGTGAATAGTAAGAAC+AGG | - | chr2_2:13428072-13428091 | Msa0239230:intron | 35.0% | |
| TGTCGTGAATAGTAAGAACA+GGG | - | chr2_2:13428073-13428092 | Msa0239230:intron | 35.0% | |
| ! | CTGATATTATATCTGGCTCA+AGG | - | chr2_2:13428177-13428196 | Msa0239230:intron | 35.0% |
| TAGACCTTGAAGATCTTGAT+TGG | - | chr2_2:13428219-13428238 | Msa0239230:CDS | 35.0% | |
| ! | ATGCCATTTCTGTTGAAGAT+TGG | - | chr2_2:13428261-13428280 | Msa0239230:CDS | 35.0% |
| CTTCCAATCTTCAACAGAAA+TGG | + | chr2_2:13428267-13428286 | None:intergenic | 35.0% | |
| CATTTCTGTTGAAGATTGGA+AGG | - | chr2_2:13428265-13428284 | Msa0239230:CDS | 35.0% | |
| ! | CTTTTTATAGCCACGATACT+TGG | + | chr2_2:13428297-13428316 | None:intergenic | 35.0% |
| AGAATGATCGTCAGATATCT+TGG | - | chr2_2:13428315-13428334 | Msa0239230:CDS | 35.0% | |
| ! | ATCGTCAGATATCTTGGTTT+TGG | - | chr2_2:13428321-13428340 | Msa0239230:CDS | 35.0% |
| !!! | TCAGATATCTTGGTTTTGGA+AGG | - | chr2_2:13428325-13428344 | Msa0239230:CDS | 35.0% |
| GTATGTAGGAACTGATCTTA+TGG | - | chr2_2:13428347-13428366 | Msa0239230:CDS | 35.0% | |
| ! | GGACTACCTTTTTATATAGG+GGG | + | chr2_2:13428499-13428518 | None:intergenic | 35.0% |
| ! | GGGACTACCTTTTTATATAG+GGG | + | chr2_2:13428500-13428519 | None:intergenic | 35.0% |
| ! | GAGGGACTACCTTTTTATAT+AGG | + | chr2_2:13428502-13428521 | None:intergenic | 35.0% |
| !! | AAGATAGCAGTGGCTTTATT+AGG | - | chr2_2:13428541-13428560 | Msa0239230:CDS | 35.0% |
| GGGAAACTTAACAAGTAATC+AGG | + | chr2_2:13428614-13428633 | None:intergenic | 35.0% | |
| ! | AAGTTTCCCCATTTTCATGA+CGG | - | chr2_2:13428625-13428644 | Msa0239230:CDS | 35.0% |
| AATCTACTTCTATCCTTACC+TGG | - | chr2_2:13428683-13428702 | Msa0239230:CDS | 35.0% | |
| TTTAACTCTAGCATGACTGA+TGG | + | chr2_2:13428709-13428728 | None:intergenic | 35.0% | |
| ! | GGAGGCATAAATGAACTAAA+GGG | + | chr2_2:13428817-13428836 | None:intergenic | 35.0% |
| ! | TGGAGGCATAAATGAACTAA+AGG | + | chr2_2:13428818-13428837 | None:intergenic | 35.0% |
| !! | TAACATGTTTTTGACCCACT+TGG | - | chr2_2:13428843-13428862 | Msa0239230:CDS | 35.0% |
| !! | AACATGTTTTTGACCCACTT+GGG | - | chr2_2:13428844-13428863 | Msa0239230:CDS | 35.0% |
| !! | GATTCTCATTGGTGCTAATT+TGG | - | chr2_2:13428927-13428946 | Msa0239230:CDS | 35.0% |
| !! | TCATTGGTGCTAATTTGGAT+GGG | - | chr2_2:13428932-13428951 | Msa0239230:CDS | 35.0% |
| ! | CTTCTACACTCTAGCAATTT+TGG | + | chr2_2:13429212-13429231 | None:intergenic | 35.0% |
| AAAAAAACTTGGCAGATCGT+TGG | - | chr2_2:13429473-13429492 | Msa0239230:CDS | 35.0% | |
| TTACCAGTTAAAGGTTTCCA+TGG | - | chr2_2:13429554-13429573 | Msa0239230:CDS | 35.0% | |
| AAACCATGGAAACCTTTAAC+TGG | + | chr2_2:13429560-13429579 | None:intergenic | 35.0% | |
| AGTTAAAGGTTTCCATGGTT+TGG | - | chr2_2:13429559-13429578 | Msa0239230:CDS | 35.0% | |
| GGATTTGCAAATGAATAGAC+AGG | + | chr2_2:13429588-13429607 | None:intergenic | 35.0% | |
| CAAGTGATTATTAGGTTCAC+TGG | + | chr2_2:13429609-13429628 | None:intergenic | 35.0% | |
| TAGAAACAAGTGTGAGATGA+GGG | + | chr2_2:13429632-13429651 | None:intergenic | 35.0% | |
| ATAGAAACAAGTGTGAGATG+AGG | + | chr2_2:13429633-13429652 | None:intergenic | 35.0% | |
| TGATAGCCATAGAAGAATAC+GGG | + | chr2_2:13429670-13429689 | None:intergenic | 35.0% | |
| GTTCTTGAGTAATGATTCCA+AGG | + | chr2_2:13429703-13429722 | None:intergenic | 35.0% | |
| ACCAACCACCAAAATTCTCA+CGG | - | chr2_2:13424783-13424802 | Msa0239230:three_prime_UTR | 40.0% | |
| ! | AAGACGAGGATGTGAGTTTT+GGG | + | chr2_2:13424831-13424850 | None:intergenic | 40.0% |
| !! | CTTTTTCATCTTCGAAGACG+AGG | + | chr2_2:13424845-13424864 | None:intergenic | 40.0% |
| CTCGTCTTCGAAGATGAAAA+AGG | - | chr2_2:13424843-13424862 | Msa0239230:CDS | 40.0% | |
| TGTTACTGTTCCACATCATG+CGG | + | chr2_2:13424906-13424925 | None:intergenic | 40.0% | |
| ! | AATTGGTAATTGGTGCTTCG+AGG | - | chr2_2:13425187-13425206 | Msa0239230:intron | 40.0% |
| TAAAGAGCTACCAACAGTGA+AGG | + | chr2_2:13425285-13425304 | None:intergenic | 40.0% | |
| !!! | TCCTCTGTATGTTTTTTGCC+GGG | - | chr2_2:13425464-13425483 | Msa0239230:intron | 40.0% |
| CTTTCAGAATCCTAAAGGAG+AGG | - | chr2_2:13425527-13425546 | Msa0239230:intron | 40.0% | |
| CTAAAGGAGAGGTAATGCTT+CGG | - | chr2_2:13425538-13425557 | Msa0239230:intron | 40.0% | |
| TAAAGGAGAGGTAATGCTTC+GGG | - | chr2_2:13425539-13425558 | Msa0239230:intron | 40.0% | |
| TTCTCTGGCCATTTAAGGAT+TGG | - | chr2_2:13425678-13425697 | Msa0239230:intron | 40.0% | |
| TGGCCATTTAAGGATTGGAT+TGG | - | chr2_2:13425683-13425702 | Msa0239230:intron | 40.0% | |
| TCAACTACTCCTGCAATCAA+GGG | + | chr2_2:13425768-13425787 | None:intergenic | 40.0% | |
| ATCAACTACTCCTGCAATCA+AGG | + | chr2_2:13425769-13425788 | None:intergenic | 40.0% | |
| GAAACATGGAAAAGGTGATG+GGG | - | chr2_2:13425869-13425888 | Msa0239230:intron | 40.0% | |
| ATGGGGCCGTTATCAATAAT+GGG | - | chr2_2:13425886-13425905 | Msa0239230:intron | 40.0% | |
| CACATATCTAAGCTCCATAG+CGG | - | chr2_2:13425945-13425964 | Msa0239230:intron | 40.0% | |
| ! | CGGTGCAAAAGAGATGTTTT+GGG | - | chr2_2:13425965-13425984 | Msa0239230:intron | 40.0% |
| AGAATACTGATGATCATCGG+TGG | - | chr2_2:13426042-13426061 | Msa0239230:intron | 40.0% | |
| GAATACTGATGATCATCGGT+GGG | - | chr2_2:13426043-13426062 | Msa0239230:intron | 40.0% | |
| ATGCCTCCTGCATTCAAAAT+CGG | + | chr2_2:13426090-13426109 | None:intergenic | 40.0% | |
| !!! | TTTTGAATGCAGGAGGCATT+TGG | - | chr2_2:13426091-13426110 | Msa0239230:intron | 40.0% |
| TATGGAATTCAGGAATGAGG+AGG | - | chr2_2:13426247-13426266 | Msa0239230:CDS | 40.0% | |
| ATGGAATTCAGGAATGAGGA+GGG | - | chr2_2:13426248-13426267 | Msa0239230:CDS | 40.0% | |
| !!! | AATAAGGGAGTGGTTGGTTT+TGG | - | chr2_2:13426286-13426305 | Msa0239230:CDS | 40.0% |
| CATTTGGACATGCCACAAAA+AGG | + | chr2_2:13426343-13426362 | None:intergenic | 40.0% | |
| AAAAATCTCCTGCGGTCATT+TGG | + | chr2_2:13426359-13426378 | None:intergenic | 40.0% | |
| AAACGAAACTCACCAGCATT+AGG | + | chr2_2:13426383-13426402 | None:intergenic | 40.0% | |
| CTGAAAGGCAGTAAACTTCA+TGG | - | chr2_2:13426665-13426684 | Msa0239230:CDS | 40.0% | |
| TGGTAGAGTAAACACCCTAA+TGG | - | chr2_2:13426685-13426704 | Msa0239230:CDS | 40.0% | |
| ACACCCTAATGGTTTAGTTG+AGG | - | chr2_2:13426696-13426715 | Msa0239230:CDS | 40.0% | |
| ATCATTCCTCTAGGTTGTAG+AGG | - | chr2_2:13426748-13426767 | Msa0239230:CDS | 40.0% | |
| GGAGAAAAAGAGGTTTCACT+GGG | + | chr2_2:13426809-13426828 | None:intergenic | 40.0% | |
| AGGAGAAAAAGAGGTTTCAC+TGG | + | chr2_2:13426810-13426829 | None:intergenic | 40.0% | |
| ! | TCTGAACACCTCCCTATTTT+TGG | + | chr2_2:13426877-13426896 | None:intergenic | 40.0% |
| ACATCCTTACTTGCAACAGA+AGG | - | chr2_2:13426911-13426930 | Msa0239230:intron | 40.0% | |
| ACAACCTTCTGTTGCAAGTA+AGG | + | chr2_2:13426918-13426937 | None:intergenic | 40.0% | |
| ACTCTTATGTGTTCAAGGGA+TGG | - | chr2_2:13427014-13427033 | Msa0239230:intron | 40.0% | |
| !!! | TTTTTTTTATCTGGGGGGGT+TGG | - | chr2_2:13427249-13427268 | Msa0239230:intron | 40.0% |
| !!! | TTTTTTTATCTGGGGGGGTT+GGG | - | chr2_2:13427250-13427269 | Msa0239230:intron | 40.0% |
| CTAAGGGATTAAAGGAGTTG+AGG | - | chr2_2:13427291-13427310 | Msa0239230:intron | 40.0% | |
| GCATGAAATGAGATAGGAAG+GGG | - | chr2_2:13427444-13427463 | Msa0239230:intron | 40.0% | |
| CATGAAATGAGATAGGAAGG+GGG | - | chr2_2:13427445-13427464 | Msa0239230:intron | 40.0% | |
| ATGAAATGAGATAGGAAGGG+GGG | - | chr2_2:13427446-13427465 | Msa0239230:intron | 40.0% | |
| !! | CTACTTTTCTGCAGCATCTA+AGG | - | chr2_2:13427746-13427765 | Msa0239230:intron | 40.0% |
| ! | CAGAGAAGCTGAAGTACTTT+AGG | + | chr2_2:13427785-13427804 | None:intergenic | 40.0% |
| ! | CTAAAGTACTTCAGCTTCTC+TGG | - | chr2_2:13427783-13427802 | Msa0239230:intron | 40.0% |
| !!! | GTGTTTTTCAAGCAATTGGC+TGG | - | chr2_2:13427864-13427883 | Msa0239230:intron | 40.0% |
| CTGCAAGCAAATATTGGAGA+TGG | - | chr2_2:13427944-13427963 | Msa0239230:intron | 40.0% | |
| TGTGAAATCCATATCTGAGC+AGG | - | chr2_2:13428130-13428149 | Msa0239230:intron | 40.0% | |
| ATGTGATACCTGCTCAGATA+TGG | + | chr2_2:13428141-13428160 | None:intergenic | 40.0% | |
| GCATCCAATCAAGATCTTCA+AGG | + | chr2_2:13428226-13428245 | None:intergenic | 40.0% | |
| ATCTTGATTGGATGCTGCAT+GGG | - | chr2_2:13428231-13428250 | Msa0239230:CDS | 40.0% | |
| !!! | CTTGGTTTTGGAAGGTATGT+AGG | - | chr2_2:13428333-13428352 | Msa0239230:CDS | 40.0% |
| !! | AGTGGCTTTATTAGGCAACA+TGG | - | chr2_2:13428549-13428568 | Msa0239230:CDS | 40.0% |
| ATTAGAGGACATGGAACACA+GGG | + | chr2_2:13428591-13428610 | None:intergenic | 40.0% | |
| GTAATCAGGATTAGAGGACA+TGG | + | chr2_2:13428600-13428619 | None:intergenic | 40.0% | |
| ! | TTAGCATGGTGGTATTGAGT+TGG | - | chr2_2:13428867-13428886 | Msa0239230:CDS | 40.0% |
| !! | GTGGTATTGAGTTGGAACTT+GGG | - | chr2_2:13428875-13428894 | Msa0239230:CDS | 40.0% |
| !! | CTCATTGGTGCTAATTTGGA+TGG | - | chr2_2:13428931-13428950 | Msa0239230:CDS | 40.0% |
| TCTAGTCGACCACAACTTAA+TGG | + | chr2_2:13429054-13429073 | None:intergenic | 40.0% | |
| ! | TTAAGTTGTGGTCGACTAGA+TGG | - | chr2_2:13429054-13429073 | Msa0239230:CDS | 40.0% |
| ! | GGAAGGTTCTTCTGTTCTTT+TGG | - | chr2_2:13429516-13429535 | Msa0239230:CDS | 40.0% |
| ATAGACAGGAATCCAAACCA+TGG | + | chr2_2:13429574-13429593 | None:intergenic | 40.0% | |
| GATGAGGGCAAGTGATTATT+AGG | + | chr2_2:13429617-13429636 | None:intergenic | 40.0% | |
| ATAGCCATAGAAGAATACGG+GGG | + | chr2_2:13429668-13429687 | None:intergenic | 40.0% | |
| GATAGCCATAGAAGAATACG+GGG | + | chr2_2:13429669-13429688 | None:intergenic | 40.0% | |
| AATAGAATACACCTCCGATC+TGG | - | chr2_2:13429757-13429776 | Msa0239230:CDS | 40.0% | |
| !!! | GTTTTGGGGAGTGGTTTTTG+CGG | + | chr2_2:13424816-13424835 | None:intergenic | 45.0% |
| ! | AGACGAGGATGTGAGTTTTG+GGG | + | chr2_2:13424830-13424849 | None:intergenic | 45.0% |
| ! | GAAGACGAGGATGTGAGTTT+TGG | + | chr2_2:13424832-13424851 | None:intergenic | 45.0% |
| AATTCTTCGTCCGCATGATG+TGG | - | chr2_2:13424893-13424912 | Msa0239230:CDS | 45.0% | |
| ! | TCTAGGAGCACGAATCACTA+AGG | + | chr2_2:13424929-13424948 | None:intergenic | 45.0% |
| TGTGTGGCTTTCCACACTTT+AGG | + | chr2_2:13425129-13425148 | None:intergenic | 45.0% | |
| TTGATTCTCAGGCTCTGTAG+AGG | - | chr2_2:13425162-13425181 | Msa0239230:intron | 45.0% | |
| !! | TGTTGCTGATTCCGCGATTA+AGG | - | chr2_2:13425329-13425348 | Msa0239230:intron | 45.0% |
| GTGAATTGCTTAGAAGGGCA+CGG | - | chr2_2:13425427-13425446 | Msa0239230:intron | 45.0% | |
| TCCCGGCAAAAAACATACAG+AGG | + | chr2_2:13425468-13425487 | None:intergenic | 45.0% | |
| GCATCTTTGTTGACGCTTGT+TGG | - | chr2_2:13425495-13425514 | Msa0239230:intron | 45.0% | |
| ! | CGAAGCATTACCTCTCCTTT+AGG | + | chr2_2:13425540-13425559 | None:intergenic | 45.0% |
| AAAGGAGAGGTAATGCTTCG+GGG | - | chr2_2:13425540-13425559 | Msa0239230:intron | 45.0% | |
| AGATCGCAGATGAGTTGTTG+AGG | - | chr2_2:13425583-13425602 | Msa0239230:intron | 45.0% | |
| TCTGAGTATGAACTGTCCCA+CGG | - | chr2_2:13425614-13425633 | Msa0239230:intron | 45.0% | |
| CGGCCAATCCAATCCTTAAA+TGG | + | chr2_2:13425689-13425708 | None:intergenic | 45.0% | |
| AGCAATCCTCCATGACTTGA+AGG | + | chr2_2:13425839-13425858 | None:intergenic | 45.0% | |
| TCAAGTCATGGAGGATTGCT+TGG | - | chr2_2:13425839-13425858 | Msa0239230:intron | 45.0% | |
| GATGGGGCCGTTATCAATAA+TGG | - | chr2_2:13425885-13425904 | Msa0239230:intron | 45.0% | |
| ! | ACATCTCTTTTGCACCGCTA+TGG | + | chr2_2:13425962-13425981 | None:intergenic | 45.0% |
| ! | GCGGTGCAAAAGAGATGTTT+TGG | - | chr2_2:13425964-13425983 | Msa0239230:intron | 45.0% |
| !! | GTGTGACCGATTTTGAATGC+AGG | - | chr2_2:13426081-13426100 | Msa0239230:intron | 45.0% |
| !! | TGACCGATTTTGAATGCAGG+AGG | - | chr2_2:13426084-13426103 | Msa0239230:intron | 45.0% |
| TACAGGACCGGGTGTAATAA+GGG | - | chr2_2:13426271-13426290 | Msa0239230:CDS | 45.0% | |
| AACCACTCCCTTATTACACC+CGG | + | chr2_2:13426281-13426300 | None:intergenic | 45.0% | |
| TCTTCTGCATGCCATACAAC+TGG | - | chr2_2:13426427-13426446 | Msa0239230:CDS | 45.0% | |
| AGTGCTAGACTTCAGCTGAA+AGG | - | chr2_2:13426650-13426669 | Msa0239230:CDS | 45.0% | |
| GAAAAAGAGGTTTCACTGGG+AGG | + | chr2_2:13426806-13426825 | None:intergenic | 45.0% | |
| TTTAATCACCTAAGGCAGCC+AGG | + | chr2_2:13426850-13426869 | None:intergenic | 45.0% | |
| ! | TTAGGATAAGGTTGGGTTGC+AGG | + | chr2_2:13427131-13427150 | None:intergenic | 45.0% |
| ATTAAAGGAGTTGAGGGTCC+AGG | - | chr2_2:13427298-13427317 | Msa0239230:intron | 45.0% | |
| TTAAAGGAGTTGAGGGTCCA+GGG | - | chr2_2:13427299-13427318 | Msa0239230:intron | 45.0% | |
| !! | GGGGGGAAAAAGTGTTAAAG+TGG | - | chr2_2:13427463-13427482 | Msa0239230:intron | 45.0% |
| ! | CATAATCCAGGGTTGATTGG+TGG | + | chr2_2:13427506-13427525 | None:intergenic | 45.0% |
| ! | CTGAAGTACTTTAGGTGCAG+AGG | + | chr2_2:13427777-13427796 | None:intergenic | 45.0% |
| AGGTAGAGGAATTAGGACAC+AGG | - | chr2_2:13428015-13428034 | Msa0239230:intron | 45.0% | |
| AAAGTGATTGAGCTCTGCTC+TGG | - | chr2_2:13428038-13428057 | Msa0239230:intron | 45.0% | |
| ! | CAGGTATCACATTTTGCCGA+GGG | - | chr2_2:13428149-13428168 | Msa0239230:intron | 45.0% |
| GATCTTGATTGGATGCTGCA+TGG | - | chr2_2:13428230-13428249 | Msa0239230:CDS | 45.0% | |
| ! | AAGGCACATACCAAGTATCG+TGG | - | chr2_2:13428284-13428303 | Msa0239230:CDS | 45.0% |
| GATTAGAGGACATGGAACAC+AGG | + | chr2_2:13428592-13428611 | None:intergenic | 45.0% | |
| !! | GGTGGTATTGAGTTGGAACT+TGG | - | chr2_2:13428874-13428893 | Msa0239230:CDS | 45.0% |
| GTCTCAGGTTCGATTCTCAT+TGG | - | chr2_2:13428916-13428935 | Msa0239230:CDS | 45.0% | |
| GAAGAATGTCAGCAGAGCAA+AGG | - | chr2_2:13429495-13429514 | Msa0239230:CDS | 45.0% | |
| AATGTCAGCAGAGCAAAGGA+AGG | - | chr2_2:13429499-13429518 | Msa0239230:CDS | 45.0% | |
| CTTTCCCCCGTATTCTTCTA+TGG | - | chr2_2:13429661-13429680 | Msa0239230:CDS | 45.0% | |
| !!! | GCAGTTTTGGTGCTCCATAA+TGG | - | chr2_2:13429732-13429751 | Msa0239230:CDS | 45.0% |
| ACAACTTCTAACCAGATCGG+AGG | + | chr2_2:13429771-13429790 | None:intergenic | 45.0% | |
| !!! | TAAAAATACTATTTTTTTAA+TGG | + | chr2_2:13427381-13427400 | None:intergenic | 5.0% |
| !!! | AATTTTTTATTTTATTTTGA+GGG | + | chr2_2:13428520-13428539 | None:intergenic | 5.0% |
| !!! | TAATTTTTTATTTTATTTTG+AGG | + | chr2_2:13428521-13428540 | None:intergenic | 5.0% |
| !! | GCCGTGAGAATTTTGGTGGT+TGG | + | chr2_2:13424787-13424806 | None:intergenic | 50.0% |
| ! | GTTGGCCGTGAGAATTTTGG+TGG | + | chr2_2:13424791-13424810 | None:intergenic | 50.0% |
| !! | GTGGTTGGCCGTGAGAATTT+TGG | + | chr2_2:13424794-13424813 | None:intergenic | 50.0% |
| !!! | AGGATGTGAGTTTTGGGGAG+TGG | + | chr2_2:13424825-13424844 | None:intergenic | 50.0% |
| GAACAGAGTCTCTGCGAATG+CGG | - | chr2_2:13425048-13425067 | Msa0239230:CDS | 50.0% | |
| GTACAGCGTGTCCTAAAGTG+TGG | - | chr2_2:13425115-13425134 | Msa0239230:intron | 50.0% | |
| CAGGCTCTGTAGAGGTGAAT+TGG | - | chr2_2:13425170-13425189 | Msa0239230:intron | 50.0% | |
| CTGAGTATGAACTGTCCCAC+GGG | - | chr2_2:13425615-13425634 | Msa0239230:intron | 50.0% | |
| GAAGAGGAACCCTTGATTGC+AGG | - | chr2_2:13425756-13425775 | Msa0239230:intron | 50.0% | |
| ! | GGGCCGTTATCAATAATGGG+TGG | - | chr2_2:13425889-13425908 | Msa0239230:intron | 50.0% |
| ! | TTCAGGAATGAGGAGGGTAC+AGG | - | chr2_2:13426254-13426273 | Msa0239230:CDS | 50.0% |
| GTACAGGACCGGGTGTAATA+AGG | - | chr2_2:13426270-13426289 | Msa0239230:CDS | 50.0% | |
| GGGTGTAATAAGGGAGTGGT+TGG | - | chr2_2:13426280-13426299 | Msa0239230:CDS | 50.0% | |
| !!! | GTGGTTGGTTTTGGTGTGTC+AGG | - | chr2_2:13426295-13426314 | Msa0239230:CDS | 50.0% |
| ! | TCCGGAACATGCCCTTTTTG+TGG | - | chr2_2:13426328-13426347 | Msa0239230:CDS | 50.0% |
| ! | GCCACAAAAAGGGCATGTTC+CGG | + | chr2_2:13426332-13426351 | None:intergenic | 50.0% |
| CCTAGAGGAATGATTGCTCC+TGG | + | chr2_2:13426742-13426761 | None:intergenic | 50.0% | |
| CCAGGAGCAATCATTCCTCT+AGG | - | chr2_2:13426739-13426758 | Msa0239230:CDS | 50.0% | |
| GGAACACCTCTACAACCTAG+AGG | + | chr2_2:13426757-13426776 | None:intergenic | 50.0% | |
| CTTCATATCCTGGCTGCCTT+AGG | - | chr2_2:13426839-13426858 | Msa0239230:intron | 50.0% | |
| GCAATTCCACCAATCAACCC+TGG | - | chr2_2:13427497-13427516 | Msa0239230:intron | 50.0% | |
| TGATTGAGCTCTGCTCTGGT+GGG | - | chr2_2:13428042-13428061 | Msa0239230:intron | 50.0% | |
| ! | GCAGGTATCACATTTTGCCG+AGG | - | chr2_2:13428148-13428167 | Msa0239230:intron | 50.0% |
| AGGCAACATGGTGCTCTCTA+AGG | - | chr2_2:13428561-13428580 | Msa0239230:CDS | 50.0% | |
| !! | TTGACCCACTTGGGTTAGCA+TGG | - | chr2_2:13428853-13428872 | Msa0239230:CDS | 50.0% |
| ACCACCATGCTAACCCAAGT+GGG | + | chr2_2:13428860-13428879 | None:intergenic | 50.0% | |
| TACCACCATGCTAACCCAAG+TGG | + | chr2_2:13428861-13428880 | None:intergenic | 50.0% | |
| GAATCGAACCTGAGACCTTG+AGG | + | chr2_2:13428912-13428931 | None:intergenic | 50.0% | |
| GCTATCATGCAAGATCGCCT+TGG | - | chr2_2:13429683-13429702 | Msa0239230:CDS | 50.0% | |
| !! | GAACACATCGGCTGCAGTTT+TGG | - | chr2_2:13429719-13429738 | Msa0239230:CDS | 50.0% |
| ! | GGAGTGGTTTTTGCGGTGGT+TGG | + | chr2_2:13424809-13424828 | None:intergenic | 55.0% |
| ! | TTGGGGAGTGGTTTTTGCGG+TGG | + | chr2_2:13424813-13424832 | None:intergenic | 55.0% |
| ! | ATCGGATGGTGCTTGCTGCT+CGG | + | chr2_2:13425709-13425728 | None:intergenic | 55.0% |
| GGACGTCTGCCTTCAAGTCA+TGG | - | chr2_2:13425827-13425846 | Msa0239230:intron | 55.0% | |
| CGTCTGCCTTCAAGTCATGG+AGG | - | chr2_2:13425830-13425849 | Msa0239230:intron | 55.0% | |
| ! | GAATGAGGAGGGTACAGGAC+CGG | - | chr2_2:13426259-13426278 | Msa0239230:CDS | 55.0% |
| ! | AATGAGGAGGGTACAGGACC+GGG | - | chr2_2:13426260-13426279 | Msa0239230:CDS | 55.0% |
| GACCGGGTGTAATAAGGGAG+TGG | - | chr2_2:13426276-13426295 | Msa0239230:CDS | 55.0% | |
| TGGCATGTCCAAATGACCGC+AGG | - | chr2_2:13426348-13426367 | Msa0239230:CDS | 55.0% | |
| CCTTGTGAGGACTTGAACCC+TGG | + | chr2_2:13427319-13427338 | None:intergenic | 55.0% | |
| CCAGGGTTCAAGTCCTCACA+AGG | - | chr2_2:13427316-13427335 | Msa0239230:intron | 55.0% | |
| GTGATTGAGCTCTGCTCTGG+TGG | - | chr2_2:13428041-13428060 | Msa0239230:intron | 55.0% | |
| GATTGAGCTCTGCTCTGGTG+GGG | - | chr2_2:13428043-13428062 | Msa0239230:intron | 55.0% | |
| GCATGACTGATGGCCAGGTA+AGG | + | chr2_2:13428699-13428718 | None:intergenic | 55.0% | |
| CTCTAGCATGACTGATGGCC+AGG | + | chr2_2:13428704-13428723 | None:intergenic | 55.0% | |
| !! | ACCCACTTGGGTTAGCATGG+TGG | - | chr2_2:13428856-13428875 | Msa0239230:CDS | 55.0% |
| ! | TGGGAGTGTGCTTCTCCTCA+AGG | - | chr2_2:13428894-13428913 | Msa0239230:CDS | 55.0% |
| GTGCTTCTCCTCAAGGTCTC+AGG | - | chr2_2:13428901-13428920 | Msa0239230:CDS | 55.0% | |
| TATGAACTGTCCCACGGGCG+AGG | - | chr2_2:13425620-13425639 | Msa0239230:intron | 60.0% | |
| ATGAACTGTCCCACGGGCGA+GGG | - | chr2_2:13425621-13425640 | Msa0239230:intron | 60.0% | |
| TGAACTGTCCCACGGGCGAG+GGG | - | chr2_2:13425622-13425641 | Msa0239230:intron | 65.0% | |
| GACGAAAGCCCCTCGCCCGT+GGG | + | chr2_2:13425633-13425652 | None:intergenic | 70.0% | |
| AGACGAAAGCCCCTCGCCCG+TGG | + | chr2_2:13425634-13425653 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 13424778 | 13429802 | 13424778 | ID=Msa0239230;Name=Msa0239230 |
| chr2_2 | mRNA | 13424778 | 13429802 | 13424778 | ID=Msa0239230-mRNA-1;Parent=Msa0239230;Name=Msa0239230-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|1|0.66|1|1|1|3|51|820 |
| chr2_2 | exon | 13424778 | 13425092 | 13424778 | ID=Msa0239230-mRNA-1:exon:5636;Parent=Msa0239230-mRNA-1 |
| chr2_2 | exon | 13426234 | 13426820 | 13426234 | ID=Msa0239230-mRNA-1:exon:5635;Parent=Msa0239230-mRNA-1 |
| chr2_2 | exon | 13428191 | 13429802 | 13428191 | ID=Msa0239230-mRNA-1:exon:5634;Parent=Msa0239230-mRNA-1 |
| chr2_2 | CDS | 13428191 | 13429802 | 13428191 | ID=Msa0239230-mRNA-1:cds;Parent=Msa0239230-mRNA-1 |
| chr2_2 | CDS | 13426234 | 13426820 | 13426234 | ID=Msa0239230-mRNA-1:cds;Parent=Msa0239230-mRNA-1 |
| chr2_2 | CDS | 13424829 | 13425092 | 13424829 | ID=Msa0239230-mRNA-1:cds;Parent=Msa0239230-mRNA-1 |
| chr2_2 | three_prime_UTR | 13424778 | 13424828 | 13424778 | ID=Msa0239230-mRNA-1:three_prime_utr;Parent=Msa0239230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
