Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240550 | XP_013463001.1 | 98.068 | 207 | 4 | 0 | 1 | 207 | 1 | 207 | 4.02e-148 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240550 | sp|O64587|ACD11_ARATH | 61.881 | 202 | 75 | 2 | 7 | 207 | 6 | 206 | 5.25e-87 | 258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240550 | A0A072V5Z0 | 98.068 | 207 | 4 | 0 | 1 | 207 | 1 | 207 | 1.92e-148 | 420 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0240550 | Msa0605640 | 0.805289 | 1.434142e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240550 | MtrunA17_Chr2g0292061 | 98.068 | 207 | 4 | 0 | 1 | 207 | 69 | 275 | 1.38e-151 | 421 |
| Msa0240550 | MtrunA17_Chr2g0292701 | 55.779 | 199 | 86 | 1 | 9 | 207 | 62 | 258 | 1.97e-80 | 240 |
| Msa0240550 | MtrunA17_Chr1g0209981 | 45.771 | 201 | 105 | 1 | 11 | 207 | 14 | 214 | 2.00e-62 | 193 |
| Msa0240550 | MtrunA17_Chr1g0187451 | 24.476 | 143 | 104 | 1 | 28 | 166 | 18 | 160 | 1.76e-12 | 63.5 |
| Msa0240550 | MtrunA17_Chr1g0166501 | 23.776 | 143 | 105 | 1 | 28 | 166 | 18 | 160 | 3.91e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0240550 | AT2G34690.1 | 61.881 | 202 | 75 | 2 | 7 | 207 | 6 | 206 | 5.34e-88 | 258 |
| Msa0240550 | AT4G39670.1 | 46.341 | 205 | 105 | 1 | 8 | 207 | 25 | 229 | 4.11e-67 | 206 |
| Msa0240550 | AT2G33470.2 | 21.528 | 144 | 109 | 1 | 28 | 167 | 18 | 161 | 3.06e-11 | 60.5 |
| Msa0240550 | AT2G33470.1 | 21.528 | 144 | 109 | 1 | 28 | 167 | 18 | 161 | 3.06e-11 | 60.5 |
Find 53 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATCTGTTCCCAAGTTTC+TGG | 0.078904 | 2_2:-15802309 | None:intergenic |
| CTCTCAACAAATTTCTAGTA+TGG | 0.257432 | 2_2:-15799623 | None:intergenic |
| TGGTGATGAAGATGGAATTT+TGG | 0.271973 | 2_2:-15797902 | None:intergenic |
| TCTCTCATCTCCCCTCTCTT+TGG | 0.288979 | 2_2:+15798110 | Msa0240550:CDS |
| ATTTGTATTAGGAAGTTATA+TGG | 0.293832 | 2_2:+15802368 | Msa0240550:three_prime_UTR |
| CACAACTTCATTGGCTTCAA+TGG | 0.303603 | 2_2:+15797965 | Msa0240550:exon |
| CTGAGACATAAATTTGCATT+TGG | 0.341686 | 2_2:-15802244 | None:intergenic |
| GCCTGCATTTCTGACAGAAT+TGG | 0.347214 | 2_2:-15799598 | None:intergenic |
| ACTTCTATTGCAGTCTTTCA+AGG | 0.347825 | 2_2:+15802468 | Msa0240550:three_prime_UTR |
| TGCATTGATTGAATTCTTGC+CGG | 0.349911 | 2_2:+15797878 | Msa0240550:five_prime_UTR |
| TGTACAATGTGATTTGTATT+AGG | 0.363773 | 2_2:+15802357 | Msa0240550:three_prime_UTR |
| TCCCCTCTCTTTGGTTCCTT+AGG | 0.367777 | 2_2:+15798119 | Msa0240550:CDS |
| GTTACATTCTTTGATTGATC+AGG | 0.373423 | 2_2:+15799566 | Msa0240550:CDS |
| CGCTTGCACCTTATCATGGT+TGG | 0.374370 | 2_2:+15801834 | Msa0240550:CDS |
| ATCAAGAAGGCTGTTTCTGC+TGG | 0.377603 | 2_2:+15801860 | Msa0240550:CDS |
| TAACACAAACACAACTTCAT+TGG | 0.379330 | 2_2:+15797956 | Msa0240550:five_prime_UTR |
| ACTCTTTGATTCCAGAAACT+TGG | 0.385857 | 2_2:+15802298 | Msa0240550:CDS |
| GTGGCAGGGGAAATTCCCTT+AGG | 0.438998 | 2_2:+15801783 | Msa0240550:intron |
| CTCTTTGATTCCAGAAACTT+GGG | 0.451985 | 2_2:+15802299 | Msa0240550:CDS |
| GCCAATTCTGTCAGAAATGC+AGG | 0.459618 | 2_2:+15799597 | Msa0240550:CDS |
| CAAGCGCTTGCACCTTATCA+TGG | 0.461272 | 2_2:+15801830 | Msa0240550:CDS |
| GCTTGCACCTTATCATGGTT+GGG | 0.466937 | 2_2:+15801835 | Msa0240550:CDS |
| TGCTTTCAAGTTCGCTGAGA+AGG | 0.475530 | 2_2:+15798145 | Msa0240550:CDS |
| CCAGAAACTTGGGAACAGAT+TGG | 0.479592 | 2_2:+15802309 | Msa0240550:CDS |
| TTTGTATTAGGAAGTTATAT+GGG | 0.485639 | 2_2:+15802369 | Msa0240550:three_prime_UTR |
| CTTCGAGATGGTGATGAAGA+TGG | 0.497064 | 2_2:-15797910 | None:intergenic |
| TTGATAGCCCAACCATGATA+AGG | 0.502180 | 2_2:-15801842 | None:intergenic |
| GGGAACAGATTGGTGAACCT+TGG | 0.513491 | 2_2:+15802319 | Msa0240550:exon |
| TGGCAGGGGAAATTCCCTTA+GGG | 0.525534 | 2_2:+15801784 | Msa0240550:intron |
| TTGAATAAACTCAACGAGGA+TGG | 0.526899 | 2_2:+15801914 | Msa0240550:CDS |
| TTCAAAAGCTGTTCCTTCGT+AGG | 0.527012 | 2_2:-15801896 | None:intergenic |
| GAGAGAGCAGGCATGAGAGA+AGG | 0.537965 | 2_2:-15798093 | None:intergenic |
| TGTTACTGAATGCTGTCAAA+TGG | 0.545333 | 2_2:-15797938 | None:intergenic |
| AGAGAGCAGGCATGAGAGAA+GGG | 0.549988 | 2_2:-15798092 | None:intergenic |
| GAGAGGGGAGATGAGAGAGC+AGG | 0.563310 | 2_2:-15798105 | None:intergenic |
| TGAGAAGGATTATGTTGCCA+AGG | 0.566810 | 2_2:+15798160 | Msa0240550:CDS |
| CACAATCTGAATACAATCCA+AGG | 0.570618 | 2_2:-15802336 | None:intergenic |
| TCAAGAAGGCTGTTTCTGCT+GGG | 0.573888 | 2_2:+15801861 | Msa0240550:CDS |
| TCATGGTTGGGCTATCAAGA+AGG | 0.575824 | 2_2:+15801847 | Msa0240550:CDS |
| AGTAAAACGCGGCCTCGACA+TGG | 0.579889 | 2_2:+15799644 | Msa0240550:CDS |
| TCAATCAAAGAATGTAACTT+CGG | 0.582787 | 2_2:-15799561 | None:intergenic |
| GAACTTGAAAGCAATGCCTA+AGG | 0.604483 | 2_2:-15798135 | None:intergenic |
| TGCCTAAGGAACCAAAGAGA+GGG | 0.607881 | 2_2:-15798121 | None:intergenic |
| AATCAGAGACAGTGTTAGCG+AGG | 0.617638 | 2_2:-15798043 | None:intergenic |
| CTCTGATTCTCAATCCGCAG+AGG | 0.624294 | 2_2:+15798058 | Msa0240550:CDS |
| ATGCCTAAGGAACCAAAGAG+AGG | 0.629349 | 2_2:-15798122 | None:intergenic |
| GATGTATCTTATTCCTACGA+AGG | 0.644628 | 2_2:+15801883 | Msa0240550:CDS |
| GCCTAAGGAACCAAAGAGAG+GGG | 0.658204 | 2_2:-15798120 | None:intergenic |
| TTAGGTTAATGATCTAGCTG+AGG | 0.659685 | 2_2:+15799524 | Msa0240550:intron |
| CAAATGGTGATTCTTCGAGA+TGG | 0.664492 | 2_2:-15797922 | None:intergenic |
| AGAGTACTCTGACCATGTCG+AGG | 0.678074 | 2_2:-15799656 | None:intergenic |
| GGGAGCAACTTCAACCTCTG+CGG | 0.693012 | 2_2:-15798072 | None:intergenic |
| AATTTGTTGAGAGTAAAACG+CGG | 0.811031 | 2_2:+15799633 | Msa0240550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACAGAAAAA+TGG | - | chr2_2:15798308-15798327 | None:intergenic | 10.0% |
| !!! | GAAAAAAAAATGTTTTTTTT+TGG | + | chr2_2:15798409-15798428 | Msa0240550:intron | 10.0% |
| !!! | TTTTTAAAAATGGATTTTTA+TGG | - | chr2_2:15798755-15798774 | None:intergenic | 10.0% |
| !!! | ACTCATTTTTTTTTTAAAAA+TGG | - | chr2_2:15798765-15798784 | None:intergenic | 10.0% |
| !!! | AAGAAAAAAAATTGTTTTTT+TGG | + | chr2_2:15799043-15799062 | Msa0240550:intron | 10.0% |
| !! | TTTATTAATTGATTGTTTAA+TGG | + | chr2_2:15799499-15799518 | Msa0240550:intron | 10.0% |
| !! | ATACTCTTTAATATATATTA+CGG | + | chr2_2:15800825-15800844 | Msa0240550:intron | 10.0% |
| !!! | CTTTCTTTAATTTTTCAATT+GGG | + | chr2_2:15798190-15798209 | Msa0240550:intron | 15.0% |
| !! | GTTTATTGTAATAGTTAAAA+GGG | + | chr2_2:15798212-15798231 | Msa0240550:intron | 15.0% |
| !!! | AATGTTTTTTTTTGGTATTT+TGG | + | chr2_2:15798417-15798436 | Msa0240550:intron | 15.0% |
| !!! | TGAAAAAAGTGATTTTTTTA+AGG | + | chr2_2:15798930-15798949 | Msa0240550:intron | 15.0% |
| !!! | GAAAAAAGTGATTTTTTTAA+GGG | + | chr2_2:15798931-15798950 | Msa0240550:intron | 15.0% |
| !! | TAATATGATTATTGATAGAA+AGG | + | chr2_2:15799299-15799318 | Msa0240550:intron | 15.0% |
| !!! | AAAAAAGTATTTTGGTATTT+TGG | + | chr2_2:15799329-15799348 | Msa0240550:intron | 15.0% |
| !!! | TCTTTTGTATATTATTTACA+AGG | + | chr2_2:15799369-15799388 | Msa0240550:intron | 15.0% |
| !!! | AAAAATGTTTCATGTTATTT+TGG | + | chr2_2:15800373-15800392 | Msa0240550:intron | 15.0% |
| !!! | CTATTTTTATTAAACAGTTT+CGG | + | chr2_2:15800405-15800424 | Msa0240550:intron | 15.0% |
| !!! | TATTTTTATTAAACAGTTTC+GGG | + | chr2_2:15800406-15800425 | Msa0240550:intron | 15.0% |
| !! | TACTCTTTAATATATATTAC+GGG | + | chr2_2:15800826-15800845 | Msa0240550:intron | 15.0% |
| !! | AATTGTAATACTAAAAACTT+AGG | + | chr2_2:15801088-15801107 | Msa0240550:intron | 15.0% |
| !! | CCAATTGAAAAATTAAAGAA+AGG | - | chr2_2:15798192-15798211 | None:intergenic | 20.0% |
| !!! | CCTTTCTTTAATTTTTCAAT+TGG | + | chr2_2:15798189-15798208 | Msa0240550:intron | 20.0% |
| !! | GGTTTATTGTAATAGTTAAA+AGG | + | chr2_2:15798211-15798230 | Msa0240550:intron | 20.0% |
| !! | ATATAACATGATTCAAATCA+AGG | - | chr2_2:15798352-15798371 | None:intergenic | 20.0% |
| !!! | ATCTATTTTTTTCAACAACA+AGG | - | chr2_2:15798811-15798830 | None:intergenic | 20.0% |
| !!! | TCATTTTTAAGTGTTTGTTT+AGG | - | chr2_2:15798913-15798932 | None:intergenic | 20.0% |
| !! | TAAAAAACTGACATGATTTA+GGG | - | chr2_2:15798998-15799017 | None:intergenic | 20.0% |
| !! | ATAAAAAACTGACATGATTT+AGG | - | chr2_2:15798999-15799018 | None:intergenic | 20.0% |
| !!! | AAATTGTTTTTTTGGTAGTT+TGG | + | chr2_2:15799051-15799070 | Msa0240550:intron | 20.0% |
| !! | AATAAGCTAAAAACAACTTA+TGG | + | chr2_2:15799170-15799189 | Msa0240550:intron | 20.0% |
| !! | AAAAAAAGAACTATTTCGAT+TGG | - | chr2_2:15799273-15799292 | None:intergenic | 20.0% |
| !!! | GAAATAGTTCTTTTTTTTTG+CGG | + | chr2_2:15799276-15799295 | Msa0240550:intron | 20.0% |
| !! | TATTATGTGTATGTATACTT+TGG | + | chr2_2:15799412-15799431 | Msa0240550:intron | 20.0% |
| !!! | TTTTATGATTATACTAAGCA+TGG | + | chr2_2:15799789-15799808 | Msa0240550:intron | 20.0% |
| !!! | TGAGAAATTTTACTTTTGAA+TGG | + | chr2_2:15800291-15800310 | Msa0240550:intron | 20.0% |
| !!! | AACAACTTTCATTTTAAAAC+TGG | - | chr2_2:15800594-15800613 | None:intergenic | 20.0% |
| !! | AAAGCATAAATGTCTTAATA+GGG | + | chr2_2:15800855-15800874 | Msa0240550:intron | 20.0% |
| !! | TAATTGCACAGTAAAATTAA+CGG | + | chr2_2:15800980-15800999 | Msa0240550:intron | 20.0% |
| !!! | ATTCTTTTATGTTAAGCTTA+TGG | + | chr2_2:15801705-15801724 | Msa0240550:intron | 20.0% |
| !! | ATTTGTATTAGGAAGTTATA+TGG | + | chr2_2:15802368-15802387 | Msa0240550:three_prime_UTR | 20.0% |
| !! | TTTGTATTAGGAAGTTATAT+GGG | + | chr2_2:15802369-15802388 | Msa0240550:three_prime_UTR | 20.0% |
| ! | TGCAGTTAATATGATTAGAA+AGG | + | chr2_2:15798383-15798402 | Msa0240550:intron | 25.0% |
| ! | GTTAATATGATTAGAAAGGA+AGG | + | chr2_2:15798387-15798406 | Msa0240550:intron | 25.0% |
| !!! | TTTTTGGTATTTTGGATTAG+TGG | + | chr2_2:15798425-15798444 | Msa0240550:intron | 25.0% |
| !!! | AATGGATTTTTATGGATAGT+AGG | - | chr2_2:15798747-15798766 | None:intergenic | 25.0% |
| !!! | GGGAAAAAGTAGATTTTTTT+AGG | + | chr2_2:15798951-15798970 | Msa0240550:intron | 25.0% |
| !! | AGGAAAAAATCTGAAACAAA+CGG | + | chr2_2:15798971-15798990 | Msa0240550:intron | 25.0% |
| ! | ATGATTATTGATAGAAAGGA+AGG | + | chr2_2:15799303-15799322 | Msa0240550:intron | 25.0% |
| ! | TGATTATTGATAGAAAGGAA+GGG | + | chr2_2:15799304-15799323 | Msa0240550:intron | 25.0% |
| !!! | GAAGGGAAAAAAAAGTATTT+TGG | + | chr2_2:15799321-15799340 | Msa0240550:intron | 25.0% |
| !!! | AGTATTTTGGTATTTTGGAT+TGG | + | chr2_2:15799334-15799353 | Msa0240550:intron | 25.0% |
| ! | ATCAATTAATAAACCCTTGA+AGG | - | chr2_2:15799492-15799511 | None:intergenic | 25.0% |
| ! | ATTGATTGTTTAATGGTCTT+AGG | + | chr2_2:15799506-15799525 | Msa0240550:intron | 25.0% |
| ! | TCAATCAAAGAATGTAACTT+CGG | - | chr2_2:15799564-15799583 | None:intergenic | 25.0% |
| ! | TTCAAACCATAACATAAACA+CGG | - | chr2_2:15799766-15799785 | None:intergenic | 25.0% |
| ! | TCTGATACCATATTAGAATT+TGG | + | chr2_2:15800139-15800158 | Msa0240550:intron | 25.0% |
| ! | CTGATACCATATTAGAATTT+GGG | + | chr2_2:15800140-15800159 | Msa0240550:intron | 25.0% |
| !!! | ATTTTACTTTTGAATGGAAG+AGG | + | chr2_2:15800297-15800316 | Msa0240550:intron | 25.0% |
| ! | ACATTATAATATCATCGAAG+TGG | + | chr2_2:15800448-15800467 | Msa0240550:intron | 25.0% |
| ! | AGAAATTATGAACTTTGAAC+TGG | - | chr2_2:15800525-15800544 | None:intergenic | 25.0% |
| !! | TTTTGTGAAATGTTCCTTAT+AGG | + | chr2_2:15800706-15800725 | Msa0240550:intron | 25.0% |
| !! | CTTCAAAAGCACAAAATTTA+AGG | - | chr2_2:15800747-15800766 | None:intergenic | 25.0% |
| !! | GAAAGCATAAATGTCTTAAT+AGG | + | chr2_2:15800854-15800873 | Msa0240550:intron | 25.0% |
| ! | ATCTTTCCTCTTATGTTTAA+TGG | - | chr2_2:15800927-15800946 | None:intergenic | 25.0% |
| ! | CATTGTTACATTACAAAAGA+TGG | - | chr2_2:15801046-15801065 | None:intergenic | 25.0% |
| ! | TAATACTAAAAACTTAGGTG+CGG | + | chr2_2:15801093-15801112 | Msa0240550:intron | 25.0% |
| !!! | GGAAGGATTTCTTTTTATTT+GGG | + | chr2_2:15801162-15801181 | Msa0240550:intron | 25.0% |
| !!! | ATTTGGGTAGGTAATTTTTT+TGG | + | chr2_2:15801178-15801197 | Msa0240550:intron | 25.0% |
| !! | TTTAAGATGCAGAAAATTAC+TGG | - | chr2_2:15801246-15801265 | None:intergenic | 25.0% |
| !!! | AGGAAATTTTTTGATCCAAA+AGG | - | chr2_2:15801318-15801337 | None:intergenic | 25.0% |
| !!! | GATAATCACTTTTTTCTGTA+AGG | - | chr2_2:15801342-15801361 | None:intergenic | 25.0% |
| !!! | GCTTTATCTCAATTTTAAGT+GGG | - | chr2_2:15801398-15801417 | None:intergenic | 25.0% |
| !!! | AGCTTTATCTCAATTTTAAG+TGG | - | chr2_2:15801399-15801418 | None:intergenic | 25.0% |
| !! | ATCTAAGATAGATTCTGATA+CGG | - | chr2_2:15801507-15801526 | None:intergenic | 25.0% |
| ! | AGAATCTATCTTAGATTTGT+TGG | + | chr2_2:15801511-15801530 | Msa0240550:intron | 25.0% |
| ! | TTGAATTAACAGAGTTGTTT+CGG | + | chr2_2:15801680-15801699 | Msa0240550:intron | 25.0% |
| !! | TGTACAATGTGATTTGTATT+AGG | + | chr2_2:15802357-15802376 | Msa0240550:three_prime_UTR | 25.0% |
| TAACACAAACACAACTTCAT+TGG | + | chr2_2:15797956-15797975 | Msa0240550:five_prime_UTR | 30.0% | |
| TTAAAGAAAGGATCAAACCT+TGG | - | chr2_2:15798180-15798199 | None:intergenic | 30.0% | |
| TAGAAATCAAGTGTTAATGC+TGG | + | chr2_2:15798484-15798503 | Msa0240550:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+CGG | + | chr2_2:15798519-15798538 | Msa0240550:intron | 30.0% | |
| ! | TCCCAATAGCTTTTCATTTT+AGG | + | chr2_2:15798846-15798865 | Msa0240550:intron | 30.0% |
| CCCTAAAATGAAAAGCTATT+GGG | - | chr2_2:15798850-15798869 | None:intergenic | 30.0% | |
| ! | CCCAATAGCTTTTCATTTTA+GGG | + | chr2_2:15798847-15798866 | Msa0240550:intron | 30.0% |
| ACCCTAAAATGAAAAGCTAT+TGG | - | chr2_2:15798851-15798870 | None:intergenic | 30.0% | |
| ! | GGAAAAAATCTGAAACAAAC+GGG | + | chr2_2:15798972-15798991 | Msa0240550:intron | 30.0% |
| TTCACGTAATATGATTCGAA+TGG | + | chr2_2:15799020-15799039 | Msa0240550:intron | 30.0% | |
| !!! | TGTTTTTTTGGTAGTTTGGA+TGG | + | chr2_2:15799055-15799074 | Msa0240550:intron | 30.0% |
| GTTACATTCTTTGATTGATC+AGG | + | chr2_2:15799566-15799585 | Msa0240550:CDS | 30.0% | |
| !! | CTCTCAACAAATTTCTAGTA+TGG | - | chr2_2:15799626-15799645 | None:intergenic | 30.0% |
| !! | AATTTGTTGAGAGTAAAACG+CGG | + | chr2_2:15799633-15799652 | Msa0240550:CDS | 30.0% |
| AAATTGCCGTGTTTATGTTA+TGG | + | chr2_2:15799757-15799776 | Msa0240550:intron | 30.0% | |
| ! | ACTTTTTGTCTATGAGTGTT+GGG | + | chr2_2:15799884-15799903 | Msa0240550:intron | 30.0% |
| !!! | CTTACAAGATGGTTTTGTAA+GGG | - | chr2_2:15799944-15799963 | None:intergenic | 30.0% |
| TTGAGATATGGTCTGAAAAT+GGG | - | chr2_2:15799992-15800011 | None:intergenic | 30.0% | |
| ! | ATGTTACTTACCACTATATC+GGG | - | chr2_2:15800086-15800105 | None:intergenic | 30.0% |
| ! | CATGTTACTTACCACTATAT+CGG | - | chr2_2:15800087-15800106 | None:intergenic | 30.0% |
| TTGAACATGTGTCTATAAGT+GGG | - | chr2_2:15800216-15800235 | None:intergenic | 30.0% | |
| ! | TGAAACATTTTTGTTCCTTG+TGG | - | chr2_2:15800365-15800384 | None:intergenic | 30.0% |
| ACAAATTCTGTATCTCGATT+AGG | + | chr2_2:15800476-15800495 | Msa0240550:intron | 30.0% | |
| TTTCCTCCATTAAACATAAG+AGG | + | chr2_2:15800918-15800937 | Msa0240550:intron | 30.0% | |
| TTTCCTCTTATGTTTAATGG+AGG | - | chr2_2:15800924-15800943 | None:intergenic | 30.0% | |
| AATACTAAAAACTTAGGTGC+GGG | + | chr2_2:15801094-15801113 | Msa0240550:intron | 30.0% | |
| !! | TTTAACTTGGTCAAATCACA+GGG | + | chr2_2:15801141-15801160 | Msa0240550:intron | 30.0% |
| ! | GGGAAGGATTTCTTTTTATT+TGG | + | chr2_2:15801161-15801180 | Msa0240550:intron | 30.0% |
| !! | GGATTTCTTTTTATTTGGGT+AGG | + | chr2_2:15801166-15801185 | Msa0240550:intron | 30.0% |
| GATCTCAACAAACACAATAA+GGG | - | chr2_2:15801376-15801395 | None:intergenic | 30.0% | |
| ! | TCTAAGATAGATTCTGATAC+GGG | - | chr2_2:15801506-15801525 | None:intergenic | 30.0% |
| CTATAAGATAGCTAGCTAAT+GGG | - | chr2_2:15801619-15801638 | None:intergenic | 30.0% | |
| ACTATAAGATAGCTAGCTAA+TGG | - | chr2_2:15801620-15801639 | None:intergenic | 30.0% | |
| TAAGTACATTTGCATGTCAT+TGG | + | chr2_2:15802019-15802038 | Msa0240550:intron | 30.0% | |
| TACTATTCACCAAACTTTGA+GGG | - | chr2_2:15802048-15802067 | None:intergenic | 30.0% | |
| ATTGAACATAAGAATGTGGA+TGG | - | chr2_2:15802080-15802099 | None:intergenic | 30.0% | |
| AGAGATTGAACATAAGAATG+TGG | - | chr2_2:15802084-15802103 | None:intergenic | 30.0% | |
| ATTACACTACCTTAACAACA+GGG | - | chr2_2:15802129-15802148 | None:intergenic | 30.0% | |
| AATTACACTACCTTAACAAC+AGG | - | chr2_2:15802130-15802149 | None:intergenic | 30.0% | |
| CAAAAGTTGCAAACAACAAA+AGG | - | chr2_2:15802202-15802221 | None:intergenic | 30.0% | |
| CTGAGACATAAATTTGCATT+TGG | - | chr2_2:15802247-15802266 | None:intergenic | 30.0% | |
| !! | TGCATTGATTGAATTCTTGC+CGG | + | chr2_2:15797878-15797897 | Msa0240550:five_prime_UTR | 35.0% |
| ! | GGTGATGAAGATGGAATTTT+GGG | - | chr2_2:15797904-15797923 | None:intergenic | 35.0% |
| !! | TGGTGATGAAGATGGAATTT+TGG | - | chr2_2:15797905-15797924 | None:intergenic | 35.0% |
| TGTTACTGAATGCTGTCAAA+TGG | - | chr2_2:15797941-15797960 | None:intergenic | 35.0% | |
| AGACTATTTCGAAGAGCTTA+TGG | - | chr2_2:15798563-15798582 | None:intergenic | 35.0% | |
| TAAAACAAACGCACCCTTAA+GGG | - | chr2_2:15798638-15798657 | None:intergenic | 35.0% | |
| TAAGCATTTGTGAGACTGTT+TGG | - | chr2_2:15799226-15799245 | None:intergenic | 35.0% | |
| !! | CTATTTCGATTGGCTTGTTT+AGG | - | chr2_2:15799263-15799282 | None:intergenic | 35.0% |
| GACACTTTCTTATTGTTGCT+TGG | + | chr2_2:15799434-15799453 | Msa0240550:intron | 35.0% | |
| TTAATAAACCCTTGAAGGCT+TGG | - | chr2_2:15799487-15799506 | None:intergenic | 35.0% | |
| TTAGGTTAATGATCTAGCTG+AGG | + | chr2_2:15799524-15799543 | Msa0240550:intron | 35.0% | |
| TTATACTAAGCATGGAAGAG+TGG | + | chr2_2:15799797-15799816 | Msa0240550:intron | 35.0% | |
| TATACTAAGCATGGAAGAGT+GGG | + | chr2_2:15799798-15799817 | Msa0240550:intron | 35.0% | |
| CAACACTCATAGACAAAAAG+TGG | - | chr2_2:15799885-15799904 | None:intergenic | 35.0% | |
| !! | CACTTTTTGTCTATGAGTGT+TGG | + | chr2_2:15799883-15799902 | Msa0240550:intron | 35.0% |
| TTGGGTAGTCTCTTAGAATT+TGG | + | chr2_2:15799902-15799921 | Msa0240550:intron | 35.0% | |
| TGGGTAGTCTCTTAGAATTT+GGG | + | chr2_2:15799903-15799922 | Msa0240550:intron | 35.0% | |
| TAGTCTCTTAGAATTTGGGT+TGG | + | chr2_2:15799907-15799926 | Msa0240550:intron | 35.0% | |
| ! | AGTCTCTTAGAATTTGGGTT+GGG | + | chr2_2:15799908-15799927 | Msa0240550:intron | 35.0% |
| !!! | CCTTACAAGATGGTTTTGTA+AGG | - | chr2_2:15799945-15799964 | None:intergenic | 35.0% |
| CCTTACAAAACCATCTTGTA+AGG | + | chr2_2:15799942-15799961 | Msa0240550:intron | 35.0% | |
| ! | AAAATGGGTTTATAGGTGGT+GGG | - | chr2_2:15799977-15799996 | None:intergenic | 35.0% |
| ! | TCTGAAAATGGGTTTATAGG+TGG | - | chr2_2:15799981-15800000 | None:intergenic | 35.0% |
| ! | TGGTCTGAAAATGGGTTTAT+AGG | - | chr2_2:15799984-15800003 | None:intergenic | 35.0% |
| GTTGAGATATGGTCTGAAAA+TGG | - | chr2_2:15799993-15800012 | None:intergenic | 35.0% | |
| GTAAGTAACATGATAGCAAG+TGG | + | chr2_2:15800095-15800114 | Msa0240550:intron | 35.0% | |
| GCACAACCCAAATTCTAATA+TGG | - | chr2_2:15800149-15800168 | None:intergenic | 35.0% | |
| TAACTCAACCCTTACAAAAC+CGG | + | chr2_2:15799933-15799952 | Msa0240550:intron | 35.0% | |
| CTTGAACATGTGTCTATAAG+TGG | - | chr2_2:15800217-15800236 | None:intergenic | 35.0% | |
| AACATAGTGAAGGTGGAAAA+AGG | + | chr2_2:15800264-15800283 | Msa0240550:intron | 35.0% | |
| TATTCAAGCCACAAGCAAAA+GGG | - | chr2_2:15800339-15800358 | None:intergenic | 35.0% | |
| TTATTCAAGCCACAAGCAAA+AGG | - | chr2_2:15800340-15800359 | None:intergenic | 35.0% | |
| ATGTGCATGCAAACTTTACT+TGG | - | chr2_2:15800432-15800451 | None:intergenic | 35.0% | |
| GTCTGCACTAAAGGTTAAAA+TGG | + | chr2_2:15800627-15800646 | Msa0240550:intron | 35.0% | |
| ! | AAGCACAAAATTTAAGGCAC+TGG | - | chr2_2:15800741-15800760 | None:intergenic | 35.0% |
| ATGCGTTGTACTAAATTCAC+AGG | - | chr2_2:15800804-15800823 | None:intergenic | 35.0% | |
| ATTTCATTAAACCACCAGAG+TGG | + | chr2_2:15800886-15800905 | Msa0240550:intron | 35.0% | |
| GATTATTGATCGAATATGCC+TGG | + | chr2_2:15800944-15800963 | Msa0240550:intron | 35.0% | |
| AATTAGAATATTGCTCGTCC+AGG | - | chr2_2:15800965-15800984 | None:intergenic | 35.0% | |
| GGTCACATTTCAGTTTAACT+TGG | + | chr2_2:15801128-15801147 | Msa0240550:intron | 35.0% | |
| !! | GTTTAACTTGGTCAAATCAC+AGG | + | chr2_2:15801140-15801159 | Msa0240550:intron | 35.0% |
| TTCTAGACTATACACTCTCT+TGG | + | chr2_2:15801270-15801289 | Msa0240550:intron | 35.0% | |
| !!! | TGTCCAAAAGTACTTCCTTT+TGG | + | chr2_2:15801300-15801319 | Msa0240550:intron | 35.0% |
| !!! | GATCCAAAAGGAAGTACTTT+TGG | - | chr2_2:15801306-15801325 | None:intergenic | 35.0% |
| !!! | ATCACTTTTTTCTGTAAGGC+AGG | - | chr2_2:15801338-15801357 | None:intergenic | 35.0% |
| ! | AACACAATAAGGGTACAGTT+TGG | - | chr2_2:15801366-15801385 | None:intergenic | 35.0% |
| GGATCTCAACAAACACAATA+AGG | - | chr2_2:15801377-15801396 | None:intergenic | 35.0% | |
| ACCATCTTAGAATTTGAGCT+AGG | - | chr2_2:15801481-15801500 | None:intergenic | 35.0% | |
| GATGTATCTTATTCCTACGA+AGG | + | chr2_2:15801883-15801902 | Msa0240550:CDS | 35.0% | |
| ! | GCTTTTGAATAAACTCAACG+AGG | + | chr2_2:15801910-15801929 | Msa0240550:CDS | 35.0% |
| TTGAATAAACTCAACGAGGA+TGG | + | chr2_2:15801914-15801933 | Msa0240550:CDS | 35.0% | |
| ACTATTCACCAAACTTTGAG+GGG | - | chr2_2:15802047-15802066 | None:intergenic | 35.0% | |
| CTACTATTCACCAAACTTTG+AGG | - | chr2_2:15802049-15802068 | None:intergenic | 35.0% | |
| ! | TCCAATTTTCCCTGTTGTTA+AGG | + | chr2_2:15802117-15802136 | Msa0240550:intron | 35.0% |
| ACCTTAACAACAGGGAAAAT+TGG | - | chr2_2:15802121-15802140 | None:intergenic | 35.0% | |
| ACTCTTTGATTCCAGAAACT+TGG | + | chr2_2:15802298-15802317 | Msa0240550:CDS | 35.0% | |
| CTCTTTGATTCCAGAAACTT+GGG | + | chr2_2:15802299-15802318 | Msa0240550:CDS | 35.0% | |
| CACAATCTGAATACAATCCA+AGG | - | chr2_2:15802339-15802358 | None:intergenic | 35.0% | |
| ACTTCTATTGCAGTCTTTCA+AGG | + | chr2_2:15802468-15802487 | Msa0240550:three_prime_UTR | 35.0% | |
| ! | ATGAAGATGGAATTTTGGGC+CGG | - | chr2_2:15797900-15797919 | None:intergenic | 40.0% |
| CAAATGGTGATTCTTCGAGA+TGG | - | chr2_2:15797925-15797944 | None:intergenic | 40.0% | |
| !! | CACAACTTCATTGGCTTCAA+TGG | + | chr2_2:15797965-15797984 | Msa0240550:exon | 40.0% |
| !! | AGTGTTTTGTTGCTGCTGAT+GGG | - | chr2_2:15797996-15798015 | None:intergenic | 40.0% |
| !! | AAGTGTTTTGTTGCTGCTGA+TGG | - | chr2_2:15797997-15798016 | None:intergenic | 40.0% |
| GAACTTGAAAGCAATGCCTA+AGG | - | chr2_2:15798138-15798157 | None:intergenic | 40.0% | |
| TGAGAAGGATTATGTTGCCA+AGG | + | chr2_2:15798160-15798179 | Msa0240550:CDS | 40.0% | |
| CTAAAACAAACGCACCCTTA+AGG | - | chr2_2:15798639-15798658 | None:intergenic | 40.0% | |
| AGACTGTTTGGATGAGCTTA+TGG | - | chr2_2:15799214-15799233 | None:intergenic | 40.0% | |
| TTTGTTAAGCCAAGCCTTCA+AGG | + | chr2_2:15799475-15799494 | Msa0240550:intron | 40.0% | |
| TTGTTAAGCCAAGCCTTCAA+GGG | + | chr2_2:15799476-15799495 | Msa0240550:intron | 40.0% | |
| TAATCACCGAGTATGTGCAT+TGG | + | chr2_2:15799691-15799710 | Msa0240550:intron | 40.0% | |
| CAGTAACCAATGCACATACT+CGG | - | chr2_2:15799700-15799719 | None:intergenic | 40.0% | |
| ! | CTCAAGTAAGAGTGCGAAAT+TGG | + | chr2_2:15799839-15799858 | Msa0240550:intron | 40.0% |
| ! | AGTAAGAGTGCGAAATTGGA+TGG | + | chr2_2:15799843-15799862 | Msa0240550:intron | 40.0% |
| !! | GGTTTTGTAAGGGTTGAGTT+AGG | - | chr2_2:15799934-15799953 | None:intergenic | 40.0% |
| CAAAACCATCTTGTAAGGTG+AGG | + | chr2_2:15799947-15799966 | Msa0240550:intron | 40.0% | |
| ! | GAAAATGGGTTTATAGGTGG+TGG | - | chr2_2:15799978-15799997 | None:intergenic | 40.0% |
| !! | GGTTTTGTAAGGGTTGAGTT+AGG | - | chr2_2:15799934-15799953 | None:intergenic | 40.0% |
| !! | CTTACAAGCCGGTTTTGTAA+GGG | - | chr2_2:15800181-15800200 | None:intergenic | 40.0% |
| AAGCCATATCTCATCCAATG+TGG | + | chr2_2:15800234-15800253 | Msa0240550:intron | 40.0% | |
| AGCCATATCTCATCCAATGT+GGG | + | chr2_2:15800235-15800254 | Msa0240550:intron | 40.0% | |
| ATAGTGAAGGTGGAAAAAGG+AGG | + | chr2_2:15800267-15800286 | Msa0240550:intron | 40.0% | |
| ! | TGATTTTCCCCTTTTGCTTG+TGG | + | chr2_2:15800328-15800347 | Msa0240550:intron | 40.0% |
| ATTCAAGCCACAAGCAAAAG+GGG | - | chr2_2:15800338-15800357 | None:intergenic | 40.0% | |
| GTGGCTTGAATAAAACCACA+AGG | + | chr2_2:15800347-15800366 | Msa0240550:intron | 40.0% | |
| GAAGATTCTGTCTGCACTAA+AGG | + | chr2_2:15800618-15800637 | Msa0240550:intron | 40.0% | |
| ACTGGAAGTCATCTCCTATA+AGG | - | chr2_2:15800723-15800742 | None:intergenic | 40.0% | |
| TTTGAAGAGCTTGCACTTGT+TGG | + | chr2_2:15800760-15800779 | Msa0240550:intron | 40.0% | |
| TTGAAGAGCTTGCACTTGTT+GGG | + | chr2_2:15800761-15800780 | Msa0240550:intron | 40.0% | |
| AATTATGCTAACCACTCTGG+TGG | - | chr2_2:15800900-15800919 | None:intergenic | 40.0% | |
| GGAAATTATGCTAACCACTC+TGG | - | chr2_2:15800903-15800922 | None:intergenic | 40.0% | |
| AAAAGCTAGCTAAAAAGGCG+AGG | - | chr2_2:15801446-15801465 | None:intergenic | 40.0% | |
| !!! | TCGCCTTTTTAGCTAGCTTT+TGG | + | chr2_2:15801445-15801464 | Msa0240550:intron | 40.0% |
| !!! | CGCCTTTTTAGCTAGCTTTT+GGG | + | chr2_2:15801446-15801465 | Msa0240550:intron | 40.0% |
| !!! | GCCTTTTTAGCTAGCTTTTG+GGG | + | chr2_2:15801447-15801466 | Msa0240550:intron | 40.0% |
| ACCCCAAAAGCTAGCTAAAA+AGG | - | chr2_2:15801451-15801470 | None:intergenic | 40.0% | |
| ! | GCCTAGCTCAAATTCTAAGA+TGG | + | chr2_2:15801477-15801496 | Msa0240550:intron | 40.0% |
| TGGATGTCATGTGATCATCT+AGG | + | chr2_2:15801553-15801572 | Msa0240550:intron | 40.0% | |
| GGATGTCATGTGATCATCTA+GGG | + | chr2_2:15801554-15801573 | Msa0240550:intron | 40.0% | |
| TCCTGATCCTATGTATCTTG+TGG | + | chr2_2:15801764-15801783 | Msa0240550:intron | 40.0% | |
| ATCCTATGTATCTTGTGGCA+GGG | + | chr2_2:15801769-15801788 | Msa0240550:intron | 40.0% | |
| !!! | TTTTGAAGCTGGATCCCTAA+GGG | - | chr2_2:15801801-15801820 | None:intergenic | 40.0% |
| !!! | TGTTCGTAAGCTTTTGAAGC+TGG | - | chr2_2:15801812-15801831 | None:intergenic | 40.0% |
| ! | TTGATAGCCCAACCATGATA+AGG | - | chr2_2:15801845-15801864 | None:intergenic | 40.0% |
| TTCAAAAGCTGTTCCTTCGT+AGG | - | chr2_2:15801899-15801918 | None:intergenic | 40.0% | |
| ! | GTTTGCAACTTTTGCTTCAG+CGG | + | chr2_2:15802208-15802227 | Msa0240550:intron | 40.0% |
| ! | CTTCGAGATGGTGATGAAGA+TGG | - | chr2_2:15797913-15797932 | None:intergenic | 45.0% |
| AATCAGAGACAGTGTTAGCG+AGG | - | chr2_2:15798046-15798065 | None:intergenic | 45.0% | |
| TGCCTAAGGAACCAAAGAGA+GGG | - | chr2_2:15798124-15798143 | None:intergenic | 45.0% | |
| ATGCCTAAGGAACCAAAGAG+AGG | - | chr2_2:15798125-15798144 | None:intergenic | 45.0% | |
| !! | TGCTTTCAAGTTCGCTGAGA+AGG | + | chr2_2:15798145-15798164 | Msa0240550:CDS | 45.0% |
| AATCTAAGCCGAGACCCTTA+AGG | + | chr2_2:15798621-15798640 | Msa0240550:intron | 45.0% | |
| ATCTAAGCCGAGACCCTTAA+GGG | + | chr2_2:15798622-15798641 | Msa0240550:intron | 45.0% | |
| GCCAATTCTGTCAGAAATGC+AGG | + | chr2_2:15799597-15799616 | Msa0240550:CDS | 45.0% | |
| GCCTGCATTTCTGACAGAAT+TGG | - | chr2_2:15799601-15799620 | None:intergenic | 45.0% | |
| TGGAAGAGTGGGAAATACAC+TGG | + | chr2_2:15799809-15799828 | Msa0240550:intron | 45.0% | |
| AGAGTGCGAAATTGGATGGA+AGG | + | chr2_2:15799847-15799866 | Msa0240550:intron | 45.0% | |
| GAGTGCGAAATTGGATGGAA+GGG | + | chr2_2:15799848-15799867 | Msa0240550:intron | 45.0% | |
| GTACTCCTCACCTTACAAGA+TGG | - | chr2_2:15799955-15799974 | None:intergenic | 45.0% | |
| !! | GTCTCGCATTGGTTGAGATA+TGG | - | chr2_2:15800004-15800023 | None:intergenic | 45.0% |
| TCGTCTTAAGAGTCTCGCAT+TGG | - | chr2_2:15800015-15800034 | None:intergenic | 45.0% | |
| CATGATAGCAAGTGGTCCAA+CGG | + | chr2_2:15800103-15800122 | Msa0240550:intron | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr2_2:15800182-15800201 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr2_2:15800179-15800198 | Msa0240550:intron | 45.0% |
| GTCCCACATTGGATGAGATA+TGG | - | chr2_2:15800240-15800259 | None:intergenic | 45.0% | |
| CTATGTTCAGAGTCCCACAT+TGG | - | chr2_2:15800251-15800270 | None:intergenic | 45.0% | |
| TGGGACTCTGAACATAGTGA+AGG | + | chr2_2:15800254-15800273 | Msa0240550:intron | 45.0% | |
| GACTCTGAACATAGTGAAGG+TGG | + | chr2_2:15800257-15800276 | Msa0240550:intron | 45.0% | |
| CTGGTGACAAACAGCATAAC+AGG | - | chr2_2:15800575-15800594 | None:intergenic | 45.0% | |
| AGGTTAAAATGGTCGCTAGC+TGG | + | chr2_2:15800638-15800657 | Msa0240550:intron | 45.0% | |
| ! | TGAAGAGCTTGCACTTGTTG+GGG | + | chr2_2:15800762-15800781 | Msa0240550:intron | 45.0% |
| ACTTGGTCAAATCACAGGGA+AGG | + | chr2_2:15801145-15801164 | Msa0240550:intron | 45.0% | |
| GATAAAGCTGTAGTTGTGCG+TGG | + | chr2_2:15801410-15801429 | Msa0240550:intron | 45.0% | |
| CTAGCTAAAAAGGCGAGGAT+TGG | - | chr2_2:15801441-15801460 | None:intergenic | 45.0% | |
| GCCACAAGATACATAGGATC+AGG | - | chr2_2:15801768-15801787 | None:intergenic | 45.0% | |
| GATCCTATGTATCTTGTGGC+AGG | + | chr2_2:15801768-15801787 | Msa0240550:intron | 45.0% | |
| TCCTATGTATCTTGTGGCAG+GGG | + | chr2_2:15801770-15801789 | Msa0240550:intron | 45.0% | |
| !!! | CTTTTGAAGCTGGATCCCTA+AGG | - | chr2_2:15801802-15801821 | None:intergenic | 45.0% |
| GCTTGCACCTTATCATGGTT+GGG | + | chr2_2:15801835-15801854 | Msa0240550:CDS | 45.0% | |
| TCATGGTTGGGCTATCAAGA+AGG | + | chr2_2:15801847-15801866 | Msa0240550:CDS | 45.0% | |
| !! | ATCAAGAAGGCTGTTTCTGC+TGG | + | chr2_2:15801860-15801879 | Msa0240550:CDS | 45.0% |
| !! | TCAAGAAGGCTGTTTCTGCT+GGG | + | chr2_2:15801861-15801880 | Msa0240550:CDS | 45.0% |
| !! | CATTGGTTCCCCTCAAAGTT+TGG | + | chr2_2:15802036-15802055 | Msa0240550:intron | 45.0% |
| CCAATCTGTTCCCAAGTTTC+TGG | - | chr2_2:15802312-15802331 | None:intergenic | 45.0% | |
| CCAGAAACTTGGGAACAGAT+TGG | + | chr2_2:15802309-15802328 | Msa0240550:CDS | 45.0% | |
| CTCTGATTCTCAATCCGCAG+AGG | + | chr2_2:15798058-15798077 | Msa0240550:CDS | 50.0% | |
| AGAGAGCAGGCATGAGAGAA+GGG | - | chr2_2:15798095-15798114 | None:intergenic | 50.0% | |
| TCTCTCATCTCCCCTCTCTT+TGG | + | chr2_2:15798110-15798129 | Msa0240550:CDS | 50.0% | |
| ! | TCCCCTCTCTTTGGTTCCTT+AGG | + | chr2_2:15798119-15798138 | Msa0240550:CDS | 50.0% |
| GCCTAAGGAACCAAAGAGAG+GGG | - | chr2_2:15798123-15798142 | None:intergenic | 50.0% | |
| AAACGCACCCTTAAGGGTCT+CGG | - | chr2_2:15798632-15798651 | None:intergenic | 50.0% | |
| ! | AGAGTACTCTGACCATGTCG+AGG | - | chr2_2:15799659-15799678 | None:intergenic | 50.0% |
| TACCACTATATCGGGCCACT+CGG | - | chr2_2:15800078-15800097 | None:intergenic | 50.0% | |
| TGGTCCAACGGATCTTGGAT+AGG | + | chr2_2:15800115-15800134 | Msa0240550:intron | 50.0% | |
| AGAGCCTATCCAAGATCCGT+TGG | - | chr2_2:15800122-15800141 | None:intergenic | 50.0% | |
| GCAGTCTTCACCTTACAAGC+CGG | - | chr2_2:15800192-15800211 | None:intergenic | 50.0% | |
| ! | GAAGAGCTTGCACTTGTTGG+GGG | + | chr2_2:15800763-15800782 | Msa0240550:intron | 50.0% |
| !!! | AGCTAGCTTTTGGGGTAGTC+AGG | + | chr2_2:15801455-15801474 | Msa0240550:intron | 50.0% |
| GATAGCTAGCTAATGGGACG+AGG | - | chr2_2:15801613-15801632 | None:intergenic | 50.0% | |
| TCCCCTGCCACAAGATACAT+AGG | - | chr2_2:15801774-15801793 | None:intergenic | 50.0% | |
| TGGCAGGGGAAATTCCCTTA+GGG | + | chr2_2:15801784-15801803 | Msa0240550:intron | 50.0% | |
| CAAGCGCTTGCACCTTATCA+TGG | + | chr2_2:15801830-15801849 | Msa0240550:CDS | 50.0% | |
| CGCTTGCACCTTATCATGGT+TGG | + | chr2_2:15801834-15801853 | Msa0240550:CDS | 50.0% | |
| GGGAACAGATTGGTGAACCT+TGG | + | chr2_2:15802319-15802338 | Msa0240550:exon | 50.0% | |
| GGGAGCAACTTCAACCTCTG+CGG | - | chr2_2:15798075-15798094 | None:intergenic | 55.0% | |
| GAGAGAGCAGGCATGAGAGA+AGG | - | chr2_2:15798096-15798115 | None:intergenic | 55.0% | |
| AGTAAAACGCGGCCTCGACA+TGG | + | chr2_2:15799644-15799663 | Msa0240550:CDS | 55.0% | |
| GTCTAGTCCTAGGCGTGGAA+GGG | - | chr2_2:15800041-15800060 | None:intergenic | 55.0% | |
| TGTCTAGTCCTAGGCGTGGA+AGG | - | chr2_2:15800042-15800061 | None:intergenic | 55.0% | |
| CGCTTCAGGTGTCTAGTCCT+AGG | - | chr2_2:15800051-15800070 | None:intergenic | 55.0% | |
| ATCCGAGTGGCCCGATATAG+TGG | + | chr2_2:15800073-15800092 | Msa0240550:intron | 55.0% | |
| GCAAGTGGTCCAACGGATCT+TGG | + | chr2_2:15800110-15800129 | Msa0240550:intron | 55.0% | |
| TAGGTGCGGGTCGTTTCACT+TGG | + | chr2_2:15801107-15801126 | Msa0240550:intron | 55.0% | |
| GTGCTGCAGACGTGTAGTCT+TGG | + | chr2_2:15801533-15801552 | Msa0240550:intron | 55.0% | |
| GTGGCAGGGGAAATTCCCTT+AGG | + | chr2_2:15801783-15801802 | Msa0240550:intron | 55.0% | |
| GAGAGGGGAGATGAGAGAGC+AGG | - | chr2_2:15798108-15798127 | None:intergenic | 60.0% | |
| ACGACAACCCTTCCACGCCT+AGG | + | chr2_2:15800031-15800050 | Msa0240550:intron | 60.0% | |
| CAGGTGTCTAGTCCTAGGCG+TGG | - | chr2_2:15800046-15800065 | None:intergenic | 60.0% | |
| CACCTGAAGCGTGATCCGAG+TGG | + | chr2_2:15800060-15800079 | Msa0240550:intron | 60.0% | |
| GGCCACTCGGATCACGCTTC+AGG | - | chr2_2:15800065-15800084 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 15797867 | 15802522 | 15797867 | ID=Msa0240550;Name=Msa0240550 |
| chr2_2 | mRNA | 15797867 | 15802522 | 15797867 | ID=Msa0240550-mRNA-1;Parent=Msa0240550;Name=Msa0240550-mRNA-1;_AED=0.02;_eAED=0.02;_QI=117|1|1|1|1|1|4|188|207 |
| chr2_2 | exon | 15797867 | 15798181 | 15797867 | ID=Msa0240550-mRNA-1:exon:6483;Parent=Msa0240550-mRNA-1 |
| chr2_2 | exon | 15799528 | 15799700 | 15799528 | ID=Msa0240550-mRNA-1:exon:6484;Parent=Msa0240550-mRNA-1 |
| chr2_2 | exon | 15801790 | 15801935 | 15801790 | ID=Msa0240550-mRNA-1:exon:6485;Parent=Msa0240550-mRNA-1 |
| chr2_2 | exon | 15802228 | 15802522 | 15802228 | ID=Msa0240550-mRNA-1:exon:6486;Parent=Msa0240550-mRNA-1 |
| chr2_2 | five_prime_UTR | 15797867 | 15797983 | 15797867 | ID=Msa0240550-mRNA-1:five_prime_utr;Parent=Msa0240550-mRNA-1 |
| chr2_2 | CDS | 15797984 | 15798181 | 15797984 | ID=Msa0240550-mRNA-1:cds;Parent=Msa0240550-mRNA-1 |
| chr2_2 | CDS | 15799528 | 15799700 | 15799528 | ID=Msa0240550-mRNA-1:cds;Parent=Msa0240550-mRNA-1 |
| chr2_2 | CDS | 15801790 | 15801935 | 15801790 | ID=Msa0240550-mRNA-1:cds;Parent=Msa0240550-mRNA-1 |
| chr2_2 | CDS | 15802228 | 15802334 | 15802228 | ID=Msa0240550-mRNA-1:cds;Parent=Msa0240550-mRNA-1 |
| chr2_2 | three_prime_UTR | 15802335 | 15802522 | 15802335 | ID=Msa0240550-mRNA-1:three_prime_utr;Parent=Msa0240550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
