Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241100 | XP_003594530.3 | 96.209 | 554 | 21 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1114 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241100 | sp|Q8VYJ1|MENE_ARATH | 55.496 | 564 | 228 | 6 | 3 | 554 | 8 | 560 | 0.0 | 649 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241100 | G7IKV0 | 96.029 | 554 | 22 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1113 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0241100 | Msa0318580 | 0.801403 | 9.152278e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241100 | MtrunA17_Chr2g0292471 | 94.504 | 564 | 21 | 1 | 1 | 554 | 1 | 564 | 0.0 | 1106 |
Msa0241100 | MtrunA17_Chr2g0327341 | 26.355 | 535 | 327 | 15 | 29 | 547 | 56 | 539 | 8.53e-39 | 149 |
Msa0241100 | MtrunA17_Chr6g0471921 | 27.007 | 548 | 344 | 15 | 11 | 546 | 11 | 514 | 1.59e-36 | 142 |
Msa0241100 | MtrunA17_Chr5g0409771 | 26.789 | 545 | 311 | 15 | 31 | 547 | 71 | 555 | 2.18e-36 | 142 |
Msa0241100 | MtrunA17_Chr1g0180541 | 25.758 | 528 | 338 | 16 | 26 | 539 | 54 | 541 | 9.26e-36 | 140 |
Msa0241100 | MtrunA17_Chr1g0180551 | 26.915 | 483 | 295 | 13 | 21 | 476 | 113 | 564 | 6.10e-35 | 139 |
Msa0241100 | MtrunA17_Chr4g0028411 | 25.996 | 527 | 336 | 14 | 32 | 549 | 59 | 540 | 7.49e-35 | 138 |
Msa0241100 | MtrunA17_Chr4g0039791 | 25.655 | 534 | 331 | 12 | 32 | 547 | 76 | 561 | 1.17e-33 | 134 |
Msa0241100 | MtrunA17_Chr5g0433231 | 24.706 | 510 | 342 | 13 | 48 | 541 | 60 | 543 | 6.87e-33 | 132 |
Msa0241100 | MtrunA17_Chr5g0433241 | 25.543 | 552 | 364 | 14 | 8 | 541 | 20 | 542 | 7.63e-33 | 132 |
Msa0241100 | MtrunA17_Chr5g0396331 | 24.000 | 550 | 386 | 12 | 8 | 546 | 20 | 548 | 8.75e-31 | 126 |
Msa0241100 | MtrunA17_Chr3g0109731 | 25.872 | 545 | 341 | 18 | 27 | 542 | 39 | 549 | 1.90e-30 | 125 |
Msa0241100 | MtrunA17_Chr5g0409791 | 24.865 | 555 | 319 | 14 | 32 | 547 | 73 | 568 | 2.56e-30 | 125 |
Msa0241100 | MtrunA17_Chr4g0000461 | 25.725 | 517 | 328 | 12 | 40 | 543 | 65 | 538 | 8.52e-30 | 123 |
Msa0241100 | MtrunA17_Chr5g0433221 | 24.092 | 523 | 329 | 13 | 48 | 541 | 60 | 543 | 1.09e-28 | 120 |
Msa0241100 | MtrunA17_Chr1g0197391 | 26.987 | 478 | 281 | 16 | 32 | 486 | 87 | 519 | 2.04e-28 | 119 |
Msa0241100 | MtrunA17_Chr5g0395431 | 24.952 | 525 | 327 | 17 | 40 | 545 | 109 | 585 | 3.45e-28 | 119 |
Msa0241100 | MtrunA17_Chr5g0396311 | 25.093 | 538 | 351 | 16 | 29 | 550 | 41 | 542 | 5.46e-27 | 115 |
Msa0241100 | MtrunA17_Chr8g0370701 | 23.702 | 578 | 340 | 18 | 8 | 543 | 62 | 580 | 1.18e-26 | 114 |
Msa0241100 | MtrunA17_Chr6g0471311 | 24.521 | 522 | 345 | 17 | 48 | 549 | 60 | 552 | 2.98e-26 | 112 |
Msa0241100 | MtrunA17_Chr4g0068151 | 22.344 | 546 | 370 | 14 | 22 | 543 | 40 | 555 | 1.69e-25 | 110 |
Msa0241100 | MtrunA17_Chr2g0301671 | 22.083 | 557 | 386 | 16 | 8 | 543 | 26 | 555 | 2.10e-25 | 110 |
Msa0241100 | MtrunA17_Chr1g0157401 | 24.621 | 528 | 353 | 13 | 29 | 547 | 69 | 560 | 4.44e-25 | 109 |
Msa0241100 | MtrunA17_Chr4g0004101 | 27.042 | 355 | 199 | 13 | 218 | 546 | 10 | 330 | 5.92e-25 | 105 |
Msa0241100 | MtrunA17_Chr8g0353341 | 23.894 | 452 | 307 | 8 | 29 | 465 | 66 | 495 | 2.56e-23 | 103 |
Msa0241100 | MtrunA17_Chr4g0072561 | 26.032 | 557 | 313 | 23 | 26 | 547 | 52 | 544 | 6.03e-23 | 102 |
Msa0241100 | MtrunA17_Chr5g0406681 | 24.138 | 580 | 339 | 20 | 8 | 545 | 47 | 567 | 1.10e-22 | 102 |
Msa0241100 | MtrunA17_Chr3g0116251 | 25.568 | 352 | 213 | 8 | 128 | 465 | 172 | 488 | 1.87e-21 | 98.2 |
Msa0241100 | MtrunA17_Chr8g0370731 | 25.193 | 389 | 239 | 11 | 169 | 542 | 139 | 490 | 4.19e-21 | 96.7 |
Msa0241100 | MtrunA17_Chr3g0102411 | 24.081 | 544 | 339 | 19 | 29 | 552 | 57 | 546 | 9.20e-21 | 95.9 |
Msa0241100 | MtrunA17_Chr3g0116271 | 25.559 | 313 | 188 | 7 | 171 | 465 | 205 | 490 | 4.24e-20 | 94.0 |
Msa0241100 | MtrunA17_Chr4g0004841 | 27.755 | 245 | 141 | 8 | 310 | 546 | 123 | 339 | 3.45e-19 | 89.0 |
Msa0241100 | MtrunA17_Chr1g0186071 | 25.937 | 347 | 213 | 9 | 128 | 465 | 177 | 488 | 6.70e-19 | 90.1 |
Msa0241100 | MtrunA17_Chr2g0334131 | 26.899 | 316 | 185 | 9 | 238 | 543 | 1 | 280 | 7.36e-18 | 84.3 |
Msa0241100 | MtrunA17_Chr5g0396691 | 25.068 | 367 | 203 | 13 | 171 | 487 | 227 | 571 | 2.41e-13 | 72.8 |
Msa0241100 | MtrunA17_Chr5g0396711 | 24.451 | 364 | 205 | 11 | 171 | 482 | 227 | 572 | 8.31e-12 | 68.2 |
Msa0241100 | MtrunA17_Chr8g0388081 | 25.706 | 354 | 213 | 14 | 171 | 482 | 166 | 511 | 5.66e-11 | 65.1 |
Msa0241100 | MtrunA17_Chr1g0157431 | 26.523 | 279 | 188 | 8 | 29 | 298 | 69 | 339 | 9.31e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0241100 | AT1G30520.2 | 55.496 | 564 | 228 | 6 | 3 | 554 | 8 | 560 | 0.0 | 649 |
Msa0241100 | AT1G30520.1 | 55.496 | 564 | 228 | 6 | 3 | 554 | 8 | 560 | 0.0 | 649 |
Msa0241100 | AT1G30520.3 | 57.616 | 453 | 173 | 5 | 3 | 445 | 8 | 451 | 0.0 | 533 |
Msa0241100 | AT1G30520.4 | 57.616 | 453 | 173 | 5 | 3 | 445 | 8 | 451 | 0.0 | 533 |
Msa0241100 | AT3G21240.1 | 27.099 | 524 | 325 | 13 | 40 | 549 | 76 | 556 | 5.05e-38 | 147 |
Msa0241100 | AT3G21240.2 | 29.291 | 437 | 266 | 11 | 40 | 462 | 76 | 483 | 3.42e-35 | 139 |
Msa0241100 | AT3G21240.3 | 29.291 | 437 | 266 | 11 | 40 | 462 | 76 | 483 | 3.42e-35 | 139 |
Msa0241100 | AT4G05160.1 | 25.565 | 575 | 333 | 19 | 8 | 547 | 30 | 544 | 2.29e-34 | 137 |
Msa0241100 | AT1G66120.1 | 25.741 | 540 | 349 | 16 | 22 | 540 | 34 | 542 | 9.12e-34 | 135 |
Msa0241100 | AT4G19010.1 | 26.531 | 539 | 314 | 17 | 37 | 549 | 82 | 564 | 2.23e-33 | 134 |
Msa0241100 | AT1G20480.1 | 26.186 | 527 | 328 | 14 | 37 | 547 | 84 | 565 | 2.87e-32 | 131 |
Msa0241100 | AT3G48990.1 | 26.930 | 557 | 346 | 19 | 5 | 546 | 3 | 513 | 2.96e-32 | 130 |
Msa0241100 | AT1G65880.1 | 25.180 | 556 | 340 | 18 | 22 | 540 | 34 | 550 | 1.98e-31 | 129 |
Msa0241100 | AT1G21540.1 | 24.231 | 520 | 332 | 17 | 47 | 541 | 62 | 544 | 3.81e-31 | 127 |
Msa0241100 | AT1G65890.1 | 24.309 | 543 | 360 | 15 | 22 | 540 | 34 | 549 | 2.35e-30 | 125 |
Msa0241100 | AT1G21530.1 | 23.699 | 519 | 333 | 18 | 47 | 541 | 62 | 541 | 6.32e-30 | 124 |
Msa0241100 | AT1G21530.2 | 23.608 | 521 | 333 | 18 | 47 | 541 | 62 | 543 | 7.45e-30 | 124 |
Msa0241100 | AT1G77240.1 | 23.837 | 516 | 335 | 17 | 47 | 541 | 61 | 539 | 5.98e-29 | 121 |
Msa0241100 | AT3G16170.1 | 26.103 | 544 | 291 | 22 | 47 | 543 | 125 | 604 | 3.76e-28 | 119 |
Msa0241100 | AT3G21230.1 | 25.000 | 528 | 323 | 15 | 40 | 543 | 86 | 564 | 4.94e-28 | 118 |
Msa0241100 | AT1G65060.1 | 23.303 | 545 | 372 | 13 | 7 | 543 | 54 | 560 | 1.59e-27 | 117 |
Msa0241100 | AT1G51680.1 | 26.046 | 526 | 329 | 15 | 40 | 547 | 78 | 561 | 4.44e-27 | 115 |
Msa0241100 | AT3G21230.3 | 25.902 | 471 | 290 | 13 | 40 | 486 | 86 | 521 | 5.92e-27 | 115 |
Msa0241100 | AT5G16370.1 | 22.993 | 548 | 380 | 15 | 8 | 541 | 20 | 539 | 6.85e-27 | 115 |
Msa0241100 | AT3G16910.1 | 22.662 | 556 | 357 | 16 | 22 | 543 | 42 | 558 | 1.72e-26 | 114 |
Msa0241100 | AT5G16340.1 | 23.218 | 547 | 378 | 18 | 8 | 540 | 20 | 538 | 2.11e-26 | 113 |
Msa0241100 | AT1G20510.1 | 24.060 | 532 | 351 | 13 | 22 | 540 | 47 | 538 | 2.16e-26 | 113 |
Msa0241100 | AT1G75960.1 | 22.460 | 561 | 367 | 15 | 8 | 541 | 20 | 539 | 1.48e-25 | 110 |
Msa0241100 | AT3G21230.2 | 26.398 | 447 | 270 | 13 | 40 | 462 | 86 | 497 | 3.02e-25 | 109 |
Msa0241100 | AT1G20510.2 | 25.221 | 452 | 300 | 10 | 22 | 461 | 47 | 472 | 1.23e-24 | 107 |
Msa0241100 | AT1G20560.1 | 23.477 | 558 | 362 | 16 | 8 | 540 | 22 | 539 | 1.82e-24 | 107 |
Msa0241100 | AT2G17650.1 | 24.476 | 572 | 368 | 16 | 8 | 550 | 67 | 603 | 3.71e-24 | 107 |
Msa0241100 | AT1G51680.3 | 26.882 | 465 | 294 | 13 | 40 | 486 | 78 | 514 | 5.73e-24 | 106 |
Msa0241100 | AT1G51680.2 | 27.664 | 441 | 273 | 13 | 40 | 462 | 78 | 490 | 1.91e-23 | 104 |
Msa0241100 | AT1G76290.1 | 22.948 | 536 | 360 | 15 | 22 | 541 | 34 | 532 | 1.00e-22 | 102 |
Msa0241100 | AT5G38120.1 | 23.969 | 388 | 253 | 9 | 166 | 547 | 199 | 550 | 1.30e-21 | 99.0 |
Msa0241100 | AT1G20500.1 | 23.155 | 393 | 252 | 9 | 166 | 547 | 197 | 550 | 4.66e-21 | 97.4 |
Msa0241100 | AT1G65060.2 | 24.099 | 444 | 305 | 10 | 7 | 442 | 54 | 473 | 5.35e-21 | 96.7 |
Msa0241100 | AT5G38120.3 | 24.534 | 322 | 217 | 6 | 166 | 481 | 199 | 500 | 1.13e-20 | 95.9 |
Msa0241100 | AT5G63380.1 | 24.000 | 425 | 260 | 13 | 70 | 476 | 122 | 501 | 2.26e-20 | 95.1 |
Msa0241100 | AT1G20560.2 | 25.526 | 380 | 247 | 11 | 168 | 540 | 111 | 461 | 2.73e-20 | 94.4 |
Msa0241100 | AT5G38120.4 | 24.667 | 300 | 202 | 5 | 166 | 461 | 199 | 478 | 3.70e-19 | 90.9 |
Msa0241100 | AT5G38120.2 | 24.667 | 300 | 202 | 5 | 166 | 461 | 199 | 478 | 3.70e-19 | 90.9 |
Msa0241100 | AT1G20510.3 | 24.362 | 431 | 288 | 10 | 22 | 440 | 47 | 451 | 2.93e-18 | 88.2 |
Msa0241100 | AT1G68270.1 | 24.000 | 550 | 323 | 16 | 22 | 540 | 34 | 519 | 6.18e-18 | 87.4 |
Msa0241100 | AT1G62940.1 | 25.235 | 531 | 328 | 17 | 33 | 545 | 59 | 538 | 5.21e-16 | 81.6 |
Msa0241100 | AT3G21230.4 | 25.916 | 382 | 224 | 13 | 40 | 397 | 86 | 432 | 1.07e-13 | 73.9 |
Msa0241100 | AT3G23790.1 | 25.430 | 291 | 172 | 11 | 285 | 551 | 452 | 721 | 5.04e-12 | 69.3 |
Msa0241100 | AT4G14070.1 | 27.113 | 284 | 161 | 11 | 288 | 552 | 471 | 727 | 8.66e-12 | 68.6 |
Find 141 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAAATAAGCTTAGCTTTA+TGG | 0.023963 | 2_2:-16546065 | None:intergenic |
CCCTGTCTTGCGATTGTTTC+CGG | 0.118785 | 2_2:-16542969 | None:intergenic |
GTGTCTTTGCTTAATTATTA+TGG | 0.202044 | 2_2:+16542883 | Msa0241100:exon |
GTATTGCTGAAGATTCTTTC+TGG | 0.204374 | 2_2:-16547511 | None:intergenic |
GCTAAGCTTATTTCAGCTTA+TGG | 0.207699 | 2_2:+16546072 | Msa0241100:CDS |
AAAACCTCACAATATATTTC+TGG | 0.246188 | 2_2:-16547905 | None:intergenic |
CTCCATTCAATGAATATCTT+TGG | 0.260778 | 2_2:-16547695 | None:intergenic |
CTCGACTTTATTACCTCTTC+AGG | 0.267324 | 2_2:-16546871 | None:intergenic |
CACATTTAATGCTCAGGTAT+TGG | 0.279874 | 2_2:+16546704 | Msa0241100:CDS |
AATTTATCAACCAAACAAAT+TGG | 0.293960 | 2_2:-16547936 | None:intergenic |
CTTACCCAACGATAATTTAG+AGG | 0.298272 | 2_2:-16544382 | None:intergenic |
ACATTTAATGCTCAGGTATT+GGG | 0.304553 | 2_2:+16546705 | Msa0241100:CDS |
ATCTGCCATGGCCATGCTTA+TGG | 0.322023 | 2_2:+16545626 | Msa0241100:CDS |
GTCATAATCTGCTTCACTTC+AGG | 0.329764 | 2_2:+16544906 | Msa0241100:CDS |
TAGAAAACTACACAAATGTT+TGG | 0.336660 | 2_2:+16547844 | Msa0241100:three_prime_UTR |
ACCAGTCTTATTTCTATTGT+TGG | 0.337932 | 2_2:+16545753 | Msa0241100:CDS |
ATGGCTTATTGTGACTCCCT+TGG | 0.346950 | 2_2:-16545303 | None:intergenic |
TGATGCCTCTTAAGTATTCC+TGG | 0.362024 | 2_2:-16544837 | None:intergenic |
TTATTAGCTATTGCATTTGT+TGG | 0.372199 | 2_2:+16544346 | Msa0241100:CDS |
GTATCCAACCAAGAGAAAAT+TGG | 0.375134 | 2_2:+16547445 | Msa0241100:CDS |
ATCCTCACTATATCCAACTA+TGG | 0.378252 | 2_2:-16545360 | None:intergenic |
TGGCTTATTGTGACTCCCTT+GGG | 0.378428 | 2_2:-16545302 | None:intergenic |
CCAGTCTTATTTCTATTGTT+GGG | 0.379401 | 2_2:+16545754 | Msa0241100:CDS |
CTTGCGATTGTTTCCGGCAA+TGG | 0.384284 | 2_2:-16542963 | None:intergenic |
ATATCCAACTATGGCGATCT+TGG | 0.405905 | 2_2:-16545351 | None:intergenic |
GCATCGGATCATACAGCGTT+AGG | 0.411279 | 2_2:-16546525 | None:intergenic |
ACTGCTCCATTATGTCATAT+TGG | 0.416710 | 2_2:+16545594 | Msa0241100:CDS |
AAACCACCAATATGACATAA+TGG | 0.421628 | 2_2:-16545600 | None:intergenic |
GGAATTATACTTTCAGATAG+AGG | 0.423641 | 2_2:+16547865 | Msa0241100:three_prime_UTR |
TTGATGCAAAATTAGCTGTT+GGG | 0.425782 | 2_2:+16545679 | Msa0241100:CDS |
CATGGTAACTTGTGGCTCCT+TGG | 0.426756 | 2_2:+16546805 | Msa0241100:CDS |
CCCGTGGTAGTGAGTGGAAA+AGG | 0.430173 | 2_2:-16547722 | None:intergenic |
TCAGTGATTTGTATCTAGAA+TGG | 0.432332 | 2_2:+16544323 | Msa0241100:intron |
GAATCTTCAGCAATACTGTC+TGG | 0.433900 | 2_2:+16547518 | Msa0241100:CDS |
ATAAGACTGGTCATTATTGC+AGG | 0.438560 | 2_2:-16545741 | None:intergenic |
CTCTAGAATTTAACTACTCA+TGG | 0.440010 | 2_2:+16544868 | Msa0241100:CDS |
ACAGAACCTCCTTTCGGACT+TGG | 0.445695 | 2_2:-16547760 | None:intergenic |
CGTTTGAAAAGGATGGCTAA+TGG | 0.445807 | 2_2:-16546554 | None:intergenic |
GCCGGAAACAATCGCAAGAC+AGG | 0.445827 | 2_2:+16542968 | Msa0241100:CDS |
TACCAAAGATATTCATTGAA+TGG | 0.447730 | 2_2:+16547693 | Msa0241100:CDS |
ATCTCTGTGAAACGTGCATC+TGG | 0.450439 | 2_2:-16547411 | None:intergenic |
TACAGGTGACATTGGATCAA+TGG | 0.451600 | 2_2:+16546777 | Msa0241100:CDS |
TGCTCCTCTAAATTATCGTT+GGG | 0.451852 | 2_2:+16544378 | Msa0241100:CDS |
TGGCTCCTTGGACGTACAAA+TGG | 0.453603 | 2_2:+16546817 | Msa0241100:CDS |
GTCTGGAAAATAATTTAAGC+AGG | 0.465915 | 2_2:+16547535 | Msa0241100:CDS |
CAAATCAGAGGAATGAAGTC+TGG | 0.467474 | 2_2:+16546749 | Msa0241100:CDS |
AGCACATGGTCTTCTCCACC+TGG | 0.468779 | 2_2:+16543021 | Msa0241100:CDS |
TCTTCACCATACGTTTGAAA+AGG | 0.471599 | 2_2:-16546565 | None:intergenic |
ACTGTATGATCAAAGCTTCA+TGG | 0.471609 | 2_2:-16545322 | None:intergenic |
TCGACTTTATTACCTCTTCA+GGG | 0.471877 | 2_2:-16546870 | None:intergenic |
GGCGCAAAGACAACTGGAAA+GGG | 0.474134 | 2_2:+16545965 | Msa0241100:intron |
AATGAAGTCTGGTTTGATAC+AGG | 0.474828 | 2_2:+16546760 | Msa0241100:CDS |
GCTCCATTATGTCATATTGG+TGG | 0.476324 | 2_2:+16545597 | Msa0241100:CDS |
CTGCTCCTCTAAATTATCGT+TGG | 0.476833 | 2_2:+16544377 | Msa0241100:CDS |
TTGTTTCCGGCAATGGTCAC+CGG | 0.479148 | 2_2:-16542956 | None:intergenic |
CTCCACCTGGGTGTCACACC+AGG | 0.481945 | 2_2:+16543034 | Msa0241100:CDS |
CTAGCCAAGATCGCCATAGT+TGG | 0.483085 | 2_2:+16545347 | Msa0241100:CDS |
GCAACAGTTGGTGGAGGAAG+TGG | 0.484568 | 2_2:+16542991 | Msa0241100:CDS |
ATTGCAAGAGTTGTTATTGT+GGG | 0.487164 | 2_2:+16547384 | Msa0241100:CDS |
TTGATGAGAGCTGCTATTCA+TGG | 0.488273 | 2_2:+16544604 | Msa0241100:CDS |
CTGATTTGATGTGTTTGTGA+GGG | 0.489888 | 2_2:-16546734 | None:intergenic |
GCTCAGACAGAACCTCCTTT+CGG | 0.494105 | 2_2:-16547766 | None:intergenic |
TTTGATGCAAAATTAGCTGT+TGG | 0.494174 | 2_2:+16545678 | Msa0241100:CDS |
GCTTGACTACTAGGAACTAC+TGG | 0.496193 | 2_2:+16545275 | Msa0241100:intron |
CAAGACAGGGCAACAGTTGG+TGG | 0.499610 | 2_2:+16542982 | Msa0241100:CDS |
TGGTTGATGAATGATATGTT+TGG | 0.500818 | 2_2:-16546593 | None:intergenic |
GAGGGCCACATTTAATGCTC+AGG | 0.501334 | 2_2:+16546698 | Msa0241100:CDS |
CAACTATGGCGATCTTGGCT+AGG | 0.503562 | 2_2:-16545346 | None:intergenic |
TAGCCATCTCTGCTTACAAC+AGG | 0.504818 | 2_2:+16543065 | Msa0241100:CDS |
GTTTGTAAAATCTGAGGAAG+GGG | 0.507191 | 2_2:-16544685 | None:intergenic |
CACCATACGTTTGAAAAGGA+TGG | 0.513081 | 2_2:-16546561 | None:intergenic |
TTAGCTATTGCATTTGTTGG+AGG | 0.516957 | 2_2:+16544349 | Msa0241100:CDS |
TGTTCTTTAGTGTTGACTCC+AGG | 0.519623 | 2_2:+16544819 | Msa0241100:intron |
GCAATTCTACTAGAACATCC+AGG | 0.521231 | 2_2:+16547360 | Msa0241100:CDS |
AACTATGGCGATCTTGGCTA+GGG | 0.524739 | 2_2:-16545345 | None:intergenic |
GTACCTGTTGTAAGCAGAGA+TGG | 0.525957 | 2_2:-16543068 | None:intergenic |
GCCATGGCCATGCTTATGGT+TGG | 0.531450 | 2_2:+16545630 | Msa0241100:CDS |
ATAACAACTCTTGCAATCCC+TGG | 0.532142 | 2_2:-16547378 | None:intergenic |
ACTGTCAAGAAAATACTCAA+TGG | 0.532429 | 2_2:+16545994 | Msa0241100:CDS |
TGATGCAAAATTAGCTGTTG+GGG | 0.535858 | 2_2:+16545680 | Msa0241100:CDS |
ATGGCCATGCTTATGGTTGG+AGG | 0.545761 | 2_2:+16545633 | Msa0241100:CDS |
CCACTTGTTTGTAAAATCTG+AGG | 0.547604 | 2_2:-16544691 | None:intergenic |
TTGTTTGTAAAATCTGAGGA+AGG | 0.549300 | 2_2:-16544687 | None:intergenic |
AGAAAGTTGTGCTATCACTT+TGG | 0.555479 | 2_2:+16542859 | Msa0241100:five_prime_UTR |
CAACCACAAGGTGTTTGTGT+TGG | 0.562824 | 2_2:+16546610 | Msa0241100:CDS |
AAGAAAATACTCAATGGAGG+TGG | 0.563554 | 2_2:+16546000 | Msa0241100:CDS |
CATATCTTCAGTTCTACATG+AGG | 0.564188 | 2_2:-16546643 | None:intergenic |
TGGTGGTTTGTCATCTGCCA+TGG | 0.564769 | 2_2:+16545614 | Msa0241100:CDS |
TGTTTGTAAAATCTGAGGAA+GGG | 0.565057 | 2_2:-16544686 | None:intergenic |
CATGAGTAGTTAAATTCTAG+AGG | 0.567872 | 2_2:-16544867 | None:intergenic |
TCATCAATCACTAACATCAC+TGG | 0.571349 | 2_2:-16544588 | None:intergenic |
TGCGACCATTTGTACGTCCA+AGG | 0.572792 | 2_2:-16546822 | None:intergenic |
TGACTCCAGGAATACTTAAG+AGG | 0.573635 | 2_2:+16544832 | Msa0241100:CDS |
GAGATGGCTACAACATCTCC+TGG | 0.576205 | 2_2:-16543052 | None:intergenic |
ACAAATGGTCGCATCAAAAG+TGG | 0.576617 | 2_2:+16546832 | Msa0241100:CDS |
AAGAAGAGACCAAGTCCGAA+AGG | 0.576659 | 2_2:+16547751 | Msa0241100:CDS |
TGGTTTGATACAGGTGACAT+TGG | 0.576730 | 2_2:+16546769 | Msa0241100:CDS |
AACTACTCATGGGCAGCTGA+AGG | 0.577505 | 2_2:+16544879 | Msa0241100:CDS |
TGAGTCGATTGTTAACTCTC+CGG | 0.579414 | 2_2:+16542924 | Msa0241100:CDS |
CCCAACAATAGAAATAAGAC+TGG | 0.581042 | 2_2:-16545754 | None:intergenic |
TCCAACCATAAGCATGGCCA+TGG | 0.582247 | 2_2:-16545631 | None:intergenic |
AGGCGCAAAGACAACTGGAA+AGG | 0.584653 | 2_2:+16545964 | Msa0241100:intron |
CATCTCCTGGTGTGACACCC+AGG | 0.586613 | 2_2:-16543039 | None:intergenic |
GACAGGGCAACAGTTGGTGG+AGG | 0.586860 | 2_2:+16542985 | Msa0241100:CDS |
AATGGTCGCATCAAAAGTGG+TGG | 0.587346 | 2_2:+16546835 | Msa0241100:CDS |
CTGTCCAGAAATATATTGTG+AGG | 0.588983 | 2_2:+16547901 | Msa0241100:three_prime_UTR |
TCTAGAATTTAACTACTCAT+GGG | 0.590763 | 2_2:+16544869 | Msa0241100:CDS |
ATGGTCGCATCAAAAGTGGT+GGG | 0.593971 | 2_2:+16546836 | Msa0241100:CDS |
TCTGATTTGATGTGTTTGTG+AGG | 0.594008 | 2_2:-16546735 | None:intergenic |
CTTTGCATAGTAATCTCTGA+AGG | 0.595402 | 2_2:+16547795 | Msa0241100:CDS |
GATTGCAAGAGTTGTTATTG+TGG | 0.598009 | 2_2:+16547383 | Msa0241100:CDS |
CCGGAAACAATCGCAAGACA+GGG | 0.600263 | 2_2:+16542969 | Msa0241100:CDS |
AGATGCACGTTTCACAGAGA+TGG | 0.600464 | 2_2:+16547413 | Msa0241100:CDS |
CGCCATAGTTGGATATAGTG+AGG | 0.602430 | 2_2:+16545358 | Msa0241100:CDS |
ATATGCAAAGACGGTGACGC+AGG | 0.606011 | 2_2:+16546661 | Msa0241100:CDS |
AACCAAGAGAAAATTGGCAA+TGG | 0.609431 | 2_2:+16547451 | Msa0241100:CDS |
CGCAAAGACAACTGGAAAGG+GGG | 0.610279 | 2_2:+16545967 | Msa0241100:CDS |
TCGCAAGACAGGGCAACAGT+TGG | 0.619396 | 2_2:+16542979 | Msa0241100:CDS |
CTTTGATAAGCTCAAGCGAG+AGG | 0.619568 | 2_2:-16546026 | None:intergenic |
AGGAACTACTGGAAAACCCA+AGG | 0.622099 | 2_2:+16545286 | Msa0241100:intron |
CAATTCTACTAGAACATCCA+GGG | 0.626169 | 2_2:+16547361 | Msa0241100:CDS |
ACAAGGTGTTTGTGTTGGCA+AGG | 0.627900 | 2_2:+16546615 | Msa0241100:CDS |
GGAGAACATTTACCCTGAAG+AGG | 0.630009 | 2_2:+16546858 | Msa0241100:CDS |
TGGTCACCGGAAAATCTCGC+CGG | 0.630926 | 2_2:-16542943 | None:intergenic |
GTCAAGAAAATACTCAATGG+AGG | 0.634780 | 2_2:+16545997 | Msa0241100:CDS |
AAGAGACCAAGTCCGAAAGG+AGG | 0.641225 | 2_2:+16547754 | Msa0241100:CDS |
ACAACCTCCAACCATAAGCA+TGG | 0.645717 | 2_2:-16545637 | None:intergenic |
TTGCCAACACAAACACCTTG+TGG | 0.647309 | 2_2:-16546613 | None:intergenic |
GCACATGGTCTTCTCCACCT+GGG | 0.647783 | 2_2:+16543022 | Msa0241100:CDS |
GAACTGAAGATATGCAAAGA+CGG | 0.650069 | 2_2:+16546652 | Msa0241100:CDS |
GCGCAAAGACAACTGGAAAG+GGG | 0.654228 | 2_2:+16545966 | Msa0241100:CDS |
TCACAAACACATCAAATCAG+AGG | 0.659722 | 2_2:+16546737 | Msa0241100:CDS |
CATATCATTCATCAACCACA+AGG | 0.667147 | 2_2:+16546598 | Msa0241100:CDS |
CAATACCTGAGCATTAAATG+TGG | 0.673624 | 2_2:-16546703 | None:intergenic |
TGGATTGTCATGGTAACTTG+TGG | 0.680359 | 2_2:+16546797 | Msa0241100:CDS |
ATTGGATCAATGGATTGTCA+TGG | 0.684189 | 2_2:+16546787 | Msa0241100:CDS |
GGAACTACTGGAAAACCCAA+GGG | 0.690505 | 2_2:+16545287 | Msa0241100:intron |
TGGTCGCATCAAAAGTGGTG+GGG | 0.699875 | 2_2:+16546837 | Msa0241100:CDS |
CTCCTGGTGTGACACCCAGG+TGG | 0.704607 | 2_2:-16543036 | None:intergenic |
GAAGTGGTGTCACTAGCACA+TGG | 0.705392 | 2_2:+16543007 | Msa0241100:CDS |
AGTTAGCAATGAAAGCAGTG+AGG | 0.758739 | 2_2:+16544565 | Msa0241100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATAAAATTAAAATAAA+AGG | + | chr2_2:16543899-16543918 | Msa0241100:intron | 0.0% |
!! | TAAATTATTATATTCATCTA+TGG | + | chr2_2:16543108-16543127 | Msa0241100:intron | 10.0% |
!! | TTATTCTTATCAAATAAAAA+TGG | + | chr2_2:16543506-16543525 | Msa0241100:intron | 10.0% |
!! | TATTCTTATCAAATAAAAAT+GGG | + | chr2_2:16543507-16543526 | Msa0241100:intron | 10.0% |
!!! | TATAGTAAACTTTTATTTAA+TGG | + | chr2_2:16543720-16543739 | Msa0241100:intron | 10.0% |
!!! | TTTTATTTTAAATAGCATAA+TGG | - | chr2_2:16543889-16543908 | None:intergenic | 10.0% |
!!! | TTTTTTAAAATTATTTTTGC+TGG | + | chr2_2:16543970-16543989 | Msa0241100:intron | 10.0% |
!! | TTAATTATATATAAGCAAAA+TGG | + | chr2_2:16544238-16544257 | Msa0241100:intron | 10.0% |
!!! | TTTTCAATTAAAATAAGTTA+AGG | + | chr2_2:16547629-16547648 | Msa0241100:intron | 10.0% |
!! | TGATAAAAACAATTAGAATT+TGG | + | chr2_2:16543416-16543435 | Msa0241100:intron | 15.0% |
!!! | ATATGTAACCAAATTTTTAT+TGG | - | chr2_2:16543703-16543722 | None:intergenic | 15.0% |
!!! | ATATTCAATGATTTTACAAA+TGG | + | chr2_2:16544278-16544297 | Msa0241100:intron | 15.0% |
!!! | TTTGATGTTTTGATATTTTT+AGG | + | chr2_2:16545944-16545963 | Msa0241100:intron | 15.0% |
!! | TTGATAAATGAAAATTGTTA+CGG | - | chr2_2:16546472-16546491 | None:intergenic | 15.0% |
!!! | TAACAATTTTCATTTATCAA+AGG | + | chr2_2:16546472-16546491 | Msa0241100:intron | 15.0% |
!!! | AACAATTTTCATTTATCAAA+GGG | + | chr2_2:16546473-16546492 | Msa0241100:intron | 15.0% |
!!! | TATCTTTTTTAACATAGTTA+AGG | + | chr2_2:16547270-16547289 | Msa0241100:intron | 15.0% |
!!! | ATCTTTTTTAACATAGTTAA+GGG | + | chr2_2:16547271-16547290 | Msa0241100:intron | 15.0% |
!! | AACTTATAATGTTGTTAATG+TGG | + | chr2_2:16543300-16543319 | Msa0241100:intron | 20.0% |
!! | ACTTATAATGTTGTTAATGT+GGG | + | chr2_2:16543301-16543320 | Msa0241100:intron | 20.0% |
!!! | TTCGATTTTACTAATAATGT+AGG | - | chr2_2:16543367-16543386 | None:intergenic | 20.0% |
!! | TTTATTTGATAAGAATAACC+TGG | - | chr2_2:16543504-16543523 | None:intergenic | 20.0% |
!! | AACATTAGCCAATAAAAATT+TGG | + | chr2_2:16543692-16543711 | Msa0241100:intron | 20.0% |
!!! | AAAAAGGCTTTCTTTTTATT+TGG | - | chr2_2:16543771-16543790 | None:intergenic | 20.0% |
!! | ATCATATGAGTTATACTTAA+GGG | - | chr2_2:16543796-16543815 | None:intergenic | 20.0% |
!! | TATCATATGAGTTATACTTA+AGG | - | chr2_2:16543797-16543816 | None:intergenic | 20.0% |
!!! | ATGTGTTTTATTTTCTAACT+AGG | + | chr2_2:16543947-16543966 | Msa0241100:intron | 20.0% |
!! | TTAAATCCTAATCTATGATA+TGG | + | chr2_2:16544201-16544220 | Msa0241100:intron | 20.0% |
!!! | AAATCATTTTGTTCTTTTTG+AGG | - | chr2_2:16544448-16544467 | None:intergenic | 20.0% |
!!! | TGATTTGAAACATAATCTAT+AGG | + | chr2_2:16544462-16544481 | Msa0241100:intron | 20.0% |
!! | AATGAAATAGATTATGTGAA+AGG | - | chr2_2:16544494-16544513 | None:intergenic | 20.0% |
!!! | ATGGATAGTTTTTTTTACTT+TGG | - | chr2_2:16544752-16544771 | None:intergenic | 20.0% |
!!! | AAGCTTAAAAAAGGATTTTA+TGG | - | chr2_2:16544771-16544790 | None:intergenic | 20.0% |
!!! | GATTTTTTCAAGCTTAAAAA+AGG | - | chr2_2:16544780-16544799 | None:intergenic | 20.0% |
!! | AAAGAACAATAATAGCAATA+AGG | - | chr2_2:16544807-16544826 | None:intergenic | 20.0% |
!! | TAATGTGAATACAATAACTT+AGG | + | chr2_2:16544999-16545018 | Msa0241100:intron | 20.0% |
!! | GAACAAATGAAAAAAAGAAA+TGG | - | chr2_2:16545554-16545573 | None:intergenic | 20.0% |
!!! | TTTTTCATTTGTTCTATAAC+AGG | + | chr2_2:16545560-16545579 | Msa0241100:intron | 20.0% |
!! | ATCAAATTAGAACTTGATAA+AGG | - | chr2_2:16545930-16545949 | None:intergenic | 20.0% |
!!! | ATTAAGTTGTTTATTCAAGT+AGG | + | chr2_2:16546350-16546369 | Msa0241100:intron | 20.0% |
!!! | TTAAGTTGTTTATTCAAGTA+GGG | + | chr2_2:16546351-16546370 | Msa0241100:intron | 20.0% |
!!! | TAGATTGTTTGAAGATATTT+TGG | - | chr2_2:16547144-16547163 | None:intergenic | 20.0% |
!!! | AACTAGAAGTTATTTCAATA+TGG | - | chr2_2:16547600-16547619 | None:intergenic | 20.0% |
!! | AGGGAGAAAAAAAAATATAT+AGG | - | chr2_2:16547661-16547680 | None:intergenic | 20.0% |
!!! | AAATATATTGTGAGGTTTTT+TGG | + | chr2_2:16547909-16547928 | Msa0241100:three_prime_UTR | 20.0% |
!! | AATTTATCAACCAAACAAAT+TGG | - | chr2_2:16547939-16547958 | None:intergenic | 20.0% |
! | GTGTCTTTGCTTAATTATTA+TGG | + | chr2_2:16542883-16542902 | Msa0241100:exon | 25.0% |
! | TTAATATGAGACTCTTTCAA+TGG | - | chr2_2:16543154-16543173 | None:intergenic | 25.0% |
! | TTTATGTGAGAGATATTTCT+TGG | + | chr2_2:16543196-16543215 | Msa0241100:intron | 25.0% |
! | AGAAGAACTAATAAGTTAGT+TGG | + | chr2_2:16543264-16543283 | Msa0241100:intron | 25.0% |
! | CTTATAATGTTGTTAATGTG+GGG | + | chr2_2:16543302-16543321 | Msa0241100:intron | 25.0% |
! | TGCATATTATGATAAGACAA+TGG | + | chr2_2:16543439-16543458 | Msa0241100:intron | 25.0% |
! | AATGCAAAATTGCTCTATTT+AGG | - | chr2_2:16543571-16543590 | None:intergenic | 25.0% |
!! | TAAATAGAGCAATTTTGCAT+TGG | + | chr2_2:16543570-16543589 | Msa0241100:intron | 25.0% |
!! | ATAGAAGTACACATATCAAA+AGG | - | chr2_2:16543635-16543654 | None:intergenic | 25.0% |
! | GTTATACTTAAGGGATAAAA+AGG | - | chr2_2:16543787-16543806 | None:intergenic | 25.0% |
! | TTGTCTATTCGAAAAAAGAA+AGG | - | chr2_2:16544014-16544033 | None:intergenic | 25.0% |
! | TTATTAGCTATTGCATTTGT+TGG | + | chr2_2:16544346-16544365 | Msa0241100:CDS | 25.0% |
!! | AAAATGGAACATCATTTTGT+TGG | - | chr2_2:16544641-16544660 | None:intergenic | 25.0% |
!!! | AAAATGATGTTCCATTTTTG+AGG | + | chr2_2:16544643-16544662 | Msa0241100:CDS | 25.0% |
!! | TCTAGAATTTAACTACTCAT+GGG | + | chr2_2:16544869-16544888 | Msa0241100:CDS | 25.0% |
! | TAGTGTTAAAATATTGCTCT+AGG | + | chr2_2:16545221-16545240 | Msa0241100:intron | 25.0% |
! | AGTGTTAAAATATTGCTCTA+GGG | + | chr2_2:16545222-16545241 | Msa0241100:intron | 25.0% |
! | AACCAATAAGTAACATAAAC+CGG | - | chr2_2:16545410-16545429 | None:intergenic | 25.0% |
!! | AGTCAAATTGTTTTCAGAAA+GGG | - | chr2_2:16545814-16545833 | None:intergenic | 25.0% |
!! | AAGTCAAATTGTTTTCAGAA+AGG | - | chr2_2:16545815-16545834 | None:intergenic | 25.0% |
! | ACTAGTTGTTTATCCAAAAA+GGG | + | chr2_2:16545904-16545923 | Msa0241100:intron | 25.0% |
! | TTAGTCAATAAATTTCCTCT+AGG | - | chr2_2:16546122-16546141 | None:intergenic | 25.0% |
!! | TAGAGGAAATTTATTGACTA+AGG | + | chr2_2:16546121-16546140 | Msa0241100:intron | 25.0% |
!! | AGAGGAAATTTATTGACTAA+GGG | + | chr2_2:16546122-16546141 | Msa0241100:intron | 25.0% |
!! | TACAAGTTGAAAACAGTTTA+TGG | - | chr2_2:16546230-16546249 | None:intergenic | 25.0% |
! | ACAGCTTATATGAAAATAGT+TGG | + | chr2_2:16546280-16546299 | Msa0241100:intron | 25.0% |
!! | AAGTAGGGTCTAATTTTAAA+TGG | + | chr2_2:16546366-16546385 | Msa0241100:intron | 25.0% |
! | AAAGTCGAGTAAGATTATAT+AGG | + | chr2_2:16546885-16546904 | Msa0241100:intron | 25.0% |
! | TATATAGGTAGTAAAACACT+TGG | + | chr2_2:16546900-16546919 | Msa0241100:intron | 25.0% |
!! | AACAAACATGAGTTTTTGTT+TGG | - | chr2_2:16547568-16547587 | None:intergenic | 25.0% |
!!! | ATATTTTTTTTTCTCCCTTC+AGG | + | chr2_2:16547663-16547682 | Msa0241100:intron | 25.0% |
! | TACCAAAGATATTCATTGAA+TGG | + | chr2_2:16547693-16547712 | Msa0241100:CDS | 25.0% |
! | TAGAAAACTACACAAATGTT+TGG | + | chr2_2:16547844-16547863 | Msa0241100:three_prime_UTR | 25.0% |
! | AAAACCTCACAATATATTTC+TGG | - | chr2_2:16547908-16547927 | None:intergenic | 25.0% |
AGATGAATTTATACACCGTT+TGG | + | chr2_2:16543233-16543252 | Msa0241100:intron | 30.0% | |
!!! | TTCTTCTGCTTTTTACCAAA+CGG | - | chr2_2:16543251-16543270 | None:intergenic | 30.0% |
TTTGTTGCAGATTTATTGCT+TGG | - | chr2_2:16543390-16543409 | None:intergenic | 30.0% | |
TTCTAATGTAGTCACACTAA+TGG | + | chr2_2:16543470-16543489 | Msa0241100:intron | 30.0% | |
AACACATGACTAAACTCATA+AGG | - | chr2_2:16543934-16543953 | None:intergenic | 30.0% | |
!! | AGTTCAATTGGTTTGACTTA+AGG | - | chr2_2:16544083-16544102 | None:intergenic | 30.0% |
ACGAAGTTAGAAAGTTCAAT+TGG | - | chr2_2:16544095-16544114 | None:intergenic | 30.0% | |
GACATTCCATATCATAGATT+AGG | - | chr2_2:16544210-16544229 | None:intergenic | 30.0% | |
! | TCAGTGATTTGTATCTAGAA+TGG | + | chr2_2:16544323-16544342 | Msa0241100:intron | 30.0% |
TGAGGTAATAATACAAGTGA+GGG | - | chr2_2:16544430-16544449 | None:intergenic | 30.0% | |
TTGAGGTAATAATACAAGTG+AGG | - | chr2_2:16544431-16544450 | None:intergenic | 30.0% | |
TGTTTGTAAAATCTGAGGAA+GGG | - | chr2_2:16544689-16544708 | None:intergenic | 30.0% | |
TTGTTTGTAAAATCTGAGGA+AGG | - | chr2_2:16544690-16544709 | None:intergenic | 30.0% | |
! | GATTTTACAAACAAGTGGAA+TGG | + | chr2_2:16544696-16544715 | Msa0241100:CDS | 30.0% |
CATGAGTAGTTAAATTCTAG+AGG | - | chr2_2:16544870-16544889 | None:intergenic | 30.0% | |
!! | CTCTAGAATTTAACTACTCA+TGG | + | chr2_2:16544868-16544887 | Msa0241100:CDS | 30.0% |
TCGACTACTTCAAAAAAACA+TGG | + | chr2_2:16544943-16544962 | Msa0241100:intron | 30.0% | |
AATGAAACCATATGTCATGT+CGG | + | chr2_2:16545106-16545125 | Msa0241100:intron | 30.0% | |
! | ATCCGGTTTATGTTACTTAT+TGG | + | chr2_2:16545405-16545424 | Msa0241100:intron | 30.0% |
TACCATTATATCGTAACATG+AGG | + | chr2_2:16545439-16545458 | Msa0241100:intron | 30.0% | |
AACCTCATGTTACGATATAA+TGG | - | chr2_2:16545444-16545463 | None:intergenic | 30.0% | |
AAACCACCAATATGACATAA+TGG | - | chr2_2:16545603-16545622 | None:intergenic | 30.0% | |
! | GCTAATTTTGCATCAAACTT+CGG | - | chr2_2:16545675-16545694 | None:intergenic | 30.0% |
TTTGATGCAAAATTAGCTGT+TGG | + | chr2_2:16545678-16545697 | Msa0241100:CDS | 30.0% | |
TTGATGCAAAATTAGCTGTT+GGG | + | chr2_2:16545679-16545698 | Msa0241100:CDS | 30.0% | |
!! | ACCAGTCTTATTTCTATTGT+TGG | + | chr2_2:16545753-16545772 | Msa0241100:CDS | 30.0% |
!! | CCAGTCTTATTTCTATTGTT+GGG | + | chr2_2:16545754-16545773 | Msa0241100:CDS | 30.0% |
!! | GTTTTGTTCCTATTTGAAAC+TGG | - | chr2_2:16545786-16545805 | None:intergenic | 30.0% |
CACTAGTTGTTTATCCAAAA+AGG | + | chr2_2:16545903-16545922 | Msa0241100:intron | 30.0% | |
ACTGTCAAGAAAATACTCAA+TGG | + | chr2_2:16545994-16546013 | Msa0241100:CDS | 30.0% | |
!! | CTGAAATAAGCTTAGCTTTA+TGG | - | chr2_2:16546068-16546087 | None:intergenic | 30.0% |
! | CATGTTATAAGTTGTTTCCA+AGG | - | chr2_2:16546206-16546225 | None:intergenic | 30.0% |
!! | CTGTTTTTCAAAAGTTATCC+TGG | - | chr2_2:16546264-16546283 | None:intergenic | 30.0% |
! | TTGGACATTATCTTGTCTTT+TGG | + | chr2_2:16546299-16546318 | Msa0241100:intron | 30.0% |
TTACATGTAGCAAGTTCATT+TGG | + | chr2_2:16546437-16546456 | Msa0241100:intron | 30.0% | |
!! | TGGTTGATGAATGATATGTT+TGG | - | chr2_2:16546596-16546615 | None:intergenic | 30.0% |
!!! | CAGGAAGAATTTTAACTAGA+GGG | + | chr2_2:16546680-16546699 | Msa0241100:CDS | 30.0% |
ACATTTAATGCTCAGGTATT+GGG | + | chr2_2:16546705-16546724 | Msa0241100:CDS | 30.0% | |
ACAATGTTTAATCCTTCGAA+AGG | + | chr2_2:16546962-16546981 | Msa0241100:intron | 30.0% | |
CAATGTTTAATCCTTCGAAA+GGG | + | chr2_2:16546963-16546982 | Msa0241100:intron | 30.0% | |
TACGTGTATATTCTAATGCA+AGG | - | chr2_2:16547058-16547077 | None:intergenic | 30.0% | |
!!! | GTTTGAAGATATTTTGGTGA+AGG | - | chr2_2:16547138-16547157 | None:intergenic | 30.0% |
ATTTAGTCGAAATGTGGATT+CGG | - | chr2_2:16547227-16547246 | None:intergenic | 30.0% | |
GAACATATTTAGTCGAAATG+TGG | - | chr2_2:16547233-16547252 | None:intergenic | 30.0% | |
CATTTCGACTAAATATGTTC+AGG | + | chr2_2:16547233-16547252 | Msa0241100:intron | 30.0% | |
! | TAGTCTTGGTTAAAAGTTTC+AGG | + | chr2_2:16547303-16547322 | Msa0241100:intron | 30.0% |
TGAACACGTTATTTGTTTGT+AGG | + | chr2_2:16547332-16547351 | Msa0241100:intron | 30.0% | |
! | ATTGCAAGAGTTGTTATTGT+GGG | + | chr2_2:16547384-16547403 | Msa0241100:CDS | 30.0% |
GTCTGGAAAATAATTTAAGC+AGG | + | chr2_2:16547535-16547554 | Msa0241100:CDS | 30.0% | |
TTTGGTATCTTAAACCTGAA+GGG | - | chr2_2:16547680-16547699 | None:intergenic | 30.0% | |
CTCCATTCAATGAATATCTT+TGG | - | chr2_2:16547698-16547717 | None:intergenic | 30.0% | |
!! | AGTTTTCTAGAAAACAGGAT+GGG | - | chr2_2:16547833-16547852 | None:intergenic | 30.0% |
!! | TAGTTTTCTAGAAAACAGGA+TGG | - | chr2_2:16547834-16547853 | None:intergenic | 30.0% |
!! | TGTGTAGTTTTCTAGAAAAC+AGG | - | chr2_2:16547838-16547857 | None:intergenic | 30.0% |
GGAATTATACTTTCAGATAG+AGG | + | chr2_2:16547865-16547884 | Msa0241100:three_prime_UTR | 30.0% | |
!!! | TTTTGGAACACCAATTTGTT+TGG | + | chr2_2:16547926-16547945 | Msa0241100:three_prime_UTR | 30.0% |
AGAAAGTTGTGCTATCACTT+TGG | + | chr2_2:16542859-16542878 | Msa0241100:five_prime_UTR | 35.0% | |
! | AATAATGTAGGAGCACATGT+GGG | - | chr2_2:16543355-16543374 | None:intergenic | 35.0% |
! | TAATAATGTAGGAGCACATG+TGG | - | chr2_2:16543356-16543375 | None:intergenic | 35.0% |
TAGTCACACTAATGGAAAGT+AGG | + | chr2_2:16543478-16543497 | Msa0241100:intron | 35.0% | |
TATCTTAACATGTGCCTTGA+GGG | + | chr2_2:16543661-16543680 | Msa0241100:intron | 35.0% | |
CAATTCTCATCTCAATAGGT+TGG | - | chr2_2:16544151-16544170 | None:intergenic | 35.0% | |
CAACCTATTGAGATGAGAAT+TGG | + | chr2_2:16544149-16544168 | Msa0241100:intron | 35.0% | |
CTACCAATTCTCATCTCAAT+AGG | - | chr2_2:16544155-16544174 | None:intergenic | 35.0% | |
! | TTAGCTATTGCATTTGTTGG+AGG | + | chr2_2:16544349-16544368 | Msa0241100:CDS | 35.0% |
TGCTCCTCTAAATTATCGTT+GGG | + | chr2_2:16544378-16544397 | Msa0241100:CDS | 35.0% | |
CTTACCCAACGATAATTTAG+AGG | - | chr2_2:16544385-16544404 | None:intergenic | 35.0% | |
!!! | TCTCCTAAAGAGTTTTGAAG+AGG | + | chr2_2:16544539-16544558 | Msa0241100:intron | 35.0% |
TTGCCTCTTCAAAACTCTTT+AGG | - | chr2_2:16544545-16544564 | None:intergenic | 35.0% | |
TCATCAATCACTAACATCAC+TGG | - | chr2_2:16544591-16544610 | None:intergenic | 35.0% | |
!! | ATGATGTTCCATTTTTGAGG+TGG | + | chr2_2:16544646-16544665 | Msa0241100:CDS | 35.0% |
AAAACATGCCACCTCAAAAA+TGG | - | chr2_2:16544657-16544676 | None:intergenic | 35.0% | |
GTTTGTAAAATCTGAGGAAG+GGG | - | chr2_2:16544688-16544707 | None:intergenic | 35.0% | |
CCACTTGTTTGTAAAATCTG+AGG | - | chr2_2:16544694-16544713 | None:intergenic | 35.0% | |
! | CCTCAGATTTTACAAACAAG+TGG | + | chr2_2:16544691-16544710 | Msa0241100:CDS | 35.0% |
TTACAAACAAGTGGAATGGT+AGG | + | chr2_2:16544700-16544719 | Msa0241100:intron | 35.0% | |
ACTGTATGATCAAAGCTTCA+TGG | - | chr2_2:16545325-16545344 | None:intergenic | 35.0% | |
ATCCTCACTATATCCAACTA+TGG | - | chr2_2:16545363-16545382 | None:intergenic | 35.0% | |
AACATAAACCGGATGTAACA+GGG | - | chr2_2:16545399-16545418 | None:intergenic | 35.0% | |
TAACATAAACCGGATGTAAC+AGG | - | chr2_2:16545400-16545419 | None:intergenic | 35.0% | |
GGAGAACTCAGTCATTATTT+GGG | - | chr2_2:16545533-16545552 | None:intergenic | 35.0% | |
TGGAGAACTCAGTCATTATT+TGG | - | chr2_2:16545534-16545553 | None:intergenic | 35.0% | |
ACTGCTCCATTATGTCATAT+TGG | + | chr2_2:16545594-16545613 | Msa0241100:CDS | 35.0% | |
TGATGCAAAATTAGCTGTTG+GGG | + | chr2_2:16545680-16545699 | Msa0241100:CDS | 35.0% | |
! | ATAAGACTGGTCATTATTGC+AGG | - | chr2_2:16545744-16545763 | None:intergenic | 35.0% |
CCCAACAATAGAAATAAGAC+TGG | - | chr2_2:16545757-16545776 | None:intergenic | 35.0% | |
GGTATGTTCCAGTTTCAAAT+AGG | + | chr2_2:16545775-16545794 | Msa0241100:intron | 35.0% | |
! | AACTTGATAAAGGCCCTTTT+TGG | - | chr2_2:16545920-16545939 | None:intergenic | 35.0% |
GTCAAGAAAATACTCAATGG+AGG | + | chr2_2:16545997-16546016 | Msa0241100:CDS | 35.0% | |
AAGAAAATACTCAATGGAGG+TGG | + | chr2_2:16546000-16546019 | Msa0241100:CDS | 35.0% | |
GCTAAGCTTATTTCAGCTTA+TGG | + | chr2_2:16546072-16546091 | Msa0241100:CDS | 35.0% | |
AATTTCCTCTAGGCAACATT+GGG | - | chr2_2:16546112-16546131 | None:intergenic | 35.0% | |
AAATTTCCTCTAGGCAACAT+TGG | - | chr2_2:16546113-16546132 | None:intergenic | 35.0% | |
ACTTGTATCATAAGATCTCC+AGG | + | chr2_2:16546243-16546262 | Msa0241100:intron | 35.0% | |
TTAATCAAGCGCTTATGTCT+AGG | - | chr2_2:16546335-16546354 | None:intergenic | 35.0% | |
!!! | TGGCTAATGGTTTTTTGCAT+CGG | - | chr2_2:16546544-16546563 | None:intergenic | 35.0% |
TCTTCACCATACGTTTGAAA+AGG | - | chr2_2:16546568-16546587 | None:intergenic | 35.0% | |
CATATCATTCATCAACCACA+AGG | + | chr2_2:16546598-16546617 | Msa0241100:CDS | 35.0% | |
CATATCTTCAGTTCTACATG+AGG | - | chr2_2:16546646-16546665 | None:intergenic | 35.0% | |
GAACTGAAGATATGCAAAGA+CGG | + | chr2_2:16546652-16546671 | Msa0241100:CDS | 35.0% | |
!!! | GCAGGAAGAATTTTAACTAG+AGG | + | chr2_2:16546679-16546698 | Msa0241100:CDS | 35.0% |
CAATACCTGAGCATTAAATG+TGG | - | chr2_2:16546706-16546725 | None:intergenic | 35.0% | |
CACATTTAATGCTCAGGTAT+TGG | + | chr2_2:16546704-16546723 | Msa0241100:CDS | 35.0% | |
! | CTGATTTGATGTGTTTGTGA+GGG | - | chr2_2:16546737-16546756 | None:intergenic | 35.0% |
! | TCTGATTTGATGTGTTTGTG+AGG | - | chr2_2:16546738-16546757 | None:intergenic | 35.0% |
TCACAAACACATCAAATCAG+AGG | + | chr2_2:16546737-16546756 | Msa0241100:CDS | 35.0% | |
! | AATGAAGTCTGGTTTGATAC+AGG | + | chr2_2:16546760-16546779 | Msa0241100:CDS | 35.0% |
!! | ATTGGATCAATGGATTGTCA+TGG | + | chr2_2:16546787-16546806 | Msa0241100:CDS | 35.0% |
TCGACTTTATTACCTCTTCA+GGG | - | chr2_2:16546873-16546892 | None:intergenic | 35.0% | |
!!! | ACTTGGAAGATTTTTAGTGC+TGG | + | chr2_2:16546917-16546936 | Msa0241100:intron | 35.0% |
ATGTCACACTAGACATTTCT+AGG | + | chr2_2:16547023-16547042 | Msa0241100:intron | 35.0% | |
!!! | TGAAGATATTTTGGTGAAGG+TGG | - | chr2_2:16547135-16547154 | None:intergenic | 35.0% |
!! | CTACACCTTTGATTTGAGAT+TGG | + | chr2_2:16547161-16547180 | Msa0241100:intron | 35.0% |
GTCATCCAATCTCAAATCAA+AGG | - | chr2_2:16547169-16547188 | None:intergenic | 35.0% | |
TTTAGTCGAAATGTGGATTC+GGG | - | chr2_2:16547226-16547245 | None:intergenic | 35.0% | |
CAATTCTACTAGAACATCCA+GGG | + | chr2_2:16547361-16547380 | Msa0241100:CDS | 35.0% | |
! | GATTGCAAGAGTTGTTATTG+TGG | + | chr2_2:16547383-16547402 | Msa0241100:CDS | 35.0% |
GTATCCAACCAAGAGAAAAT+TGG | + | chr2_2:16547445-16547464 | Msa0241100:CDS | 35.0% | |
! | ATTGCCAATTTTCTCTTGGT+TGG | - | chr2_2:16547452-16547471 | None:intergenic | 35.0% |
AACCAAGAGAAAATTGGCAA+TGG | + | chr2_2:16547451-16547470 | Msa0241100:CDS | 35.0% | |
! | AACCATTGCCAATTTTCTCT+TGG | - | chr2_2:16547456-16547475 | None:intergenic | 35.0% |
GTATTGCTGAAGATTCTTTC+TGG | - | chr2_2:16547514-16547533 | None:intergenic | 35.0% | |
CTTTGGTATCTTAAACCTGA+AGG | - | chr2_2:16547681-16547700 | None:intergenic | 35.0% | |
CTTTGCATAGTAATCTCTGA+AGG | + | chr2_2:16547795-16547814 | Msa0241100:CDS | 35.0% | |
CTGTCCAGAAATATATTGTG+AGG | + | chr2_2:16547901-16547920 | Msa0241100:three_prime_UTR | 35.0% | |
TGAGTCGATTGTTAACTCTC+CGG | + | chr2_2:16542924-16542943 | Msa0241100:CDS | 40.0% | |
!! | TCATGTTAACTTGTGCCCTT+AGG | + | chr2_2:16543530-16543549 | Msa0241100:intron | 40.0% |
!! | CATGTTAACTTGTGCCCTTA+GGG | + | chr2_2:16543531-16543550 | Msa0241100:intron | 40.0% |
TTGCTTAACATGTGCCCTAA+GGG | - | chr2_2:16543548-16543567 | None:intergenic | 40.0% | |
GTATCTTAACATGTGCCTTG+AGG | + | chr2_2:16543660-16543679 | Msa0241100:intron | 40.0% | |
!! | AATGTTAACTTGTGCCCTCA+AGG | - | chr2_2:16543678-16543697 | None:intergenic | 40.0% |
TTCACCAACATGTGACATGT+TGG | + | chr2_2:16543823-16543842 | Msa0241100:intron | 40.0% | |
TCACCAACATGTGACATGTT+GGG | + | chr2_2:16543824-16543843 | Msa0241100:intron | 40.0% | |
CTGCTCCTCTAAATTATCGT+TGG | + | chr2_2:16544377-16544396 | Msa0241100:CDS | 40.0% | |
AGTTAGCAATGAAAGCAGTG+AGG | + | chr2_2:16544565-16544584 | Msa0241100:CDS | 40.0% | |
TTGATGAGAGCTGCTATTCA+TGG | + | chr2_2:16544604-16544623 | Msa0241100:CDS | 40.0% | |
!! | TTTGAGGTGGCATGTTTTGT+TGG | + | chr2_2:16544659-16544678 | Msa0241100:CDS | 40.0% |
!! | TGTTCTTTAGTGTTGACTCC+AGG | + | chr2_2:16544819-16544838 | Msa0241100:intron | 40.0% |
TGACTCCAGGAATACTTAAG+AGG | + | chr2_2:16544832-16544851 | Msa0241100:CDS | 40.0% | |
TGATGCCTCTTAAGTATTCC+TGG | - | chr2_2:16544840-16544859 | None:intergenic | 40.0% | |
GTCATAATCTGCTTCACTTC+AGG | + | chr2_2:16544906-16544925 | Msa0241100:CDS | 40.0% | |
ACGCCTTCAATATGAAGTGT+CGG | + | chr2_2:16545160-16545179 | Msa0241100:intron | 40.0% | |
TCACCGACACTTCATATTGA+AGG | - | chr2_2:16545166-16545185 | None:intergenic | 40.0% | |
TTGTTGTGTGCTTGACTACT+AGG | + | chr2_2:16545266-16545285 | Msa0241100:intron | 40.0% | |
ATATCCAACTATGGCGATCT+TGG | - | chr2_2:16545354-16545373 | None:intergenic | 40.0% | |
GCTCCATTATGTCATATTGG+TGG | + | chr2_2:16545597-16545616 | Msa0241100:CDS | 40.0% | |
!! | TTTTTAGGCGCAAAGACAAC+TGG | + | chr2_2:16545959-16545978 | Msa0241100:intron | 40.0% |
TGAAACTGTTTGAGAGACCT+TGG | + | chr2_2:16546186-16546205 | Msa0241100:intron | 40.0% | |
CGTTTGAAAAGGATGGCTAA+TGG | - | chr2_2:16546557-16546576 | None:intergenic | 40.0% | |
! | AGCCATCCTTTTCAAACGTA+TGG | + | chr2_2:16546559-16546578 | Msa0241100:CDS | 40.0% |
CACCATACGTTTGAAAAGGA+TGG | - | chr2_2:16546564-16546583 | None:intergenic | 40.0% | |
CAAATCAGAGGAATGAAGTC+TGG | + | chr2_2:16546749-16546768 | Msa0241100:CDS | 40.0% | |
TGGTTTGATACAGGTGACAT+TGG | + | chr2_2:16546769-16546788 | Msa0241100:CDS | 40.0% | |
TACAGGTGACATTGGATCAA+TGG | + | chr2_2:16546777-16546796 | Msa0241100:CDS | 40.0% | |
TGGATTGTCATGGTAACTTG+TGG | + | chr2_2:16546797-16546816 | Msa0241100:CDS | 40.0% | |
ACAAATGGTCGCATCAAAAG+TGG | + | chr2_2:16546832-16546851 | Msa0241100:CDS | 40.0% | |
CTCGACTTTATTACCTCTTC+AGG | - | chr2_2:16546874-16546893 | None:intergenic | 40.0% | |
!! | TCCGACCATTGATTTGAGAT+CGG | + | chr2_2:16547097-16547116 | Msa0241100:intron | 40.0% |
ACCGATCTCAAATCAATGGT+CGG | - | chr2_2:16547101-16547120 | None:intergenic | 40.0% | |
TTAGTTACGCATTTAACGCG+AGG | + | chr2_2:16547198-16547217 | Msa0241100:intron | 40.0% | |
GCAATTCTACTAGAACATCC+AGG | + | chr2_2:16547360-16547379 | Msa0241100:CDS | 40.0% | |
ATAACAACTCTTGCAATCCC+TGG | - | chr2_2:16547381-16547400 | None:intergenic | 40.0% | |
GAATCTTCAGCAATACTGTC+TGG | + | chr2_2:16547518-16547537 | Msa0241100:CDS | 40.0% | |
!!! | GTCTCTTCTTATTTTTCCCG+TGG | - | chr2_2:16547741-16547760 | None:intergenic | 40.0% |
TAGCCATCTCTGCTTACAAC+AGG | + | chr2_2:16543065-16543084 | Msa0241100:CDS | 45.0% | |
GTACCTGTTGTAAGCAGAGA+TGG | - | chr2_2:16543071-16543090 | None:intergenic | 45.0% | |
GTTGTTAATGTGGGGTCACT+AGG | + | chr2_2:16543310-16543329 | Msa0241100:intron | 45.0% | |
TTAATGTGGGGTCACTAGGA+TGG | + | chr2_2:16543314-16543333 | Msa0241100:intron | 45.0% | |
ACACTAATGGAAAGTAGGCC+AGG | + | chr2_2:16543483-16543502 | Msa0241100:intron | 45.0% | |
GTTGCTTAACATGTGCCCTA+AGG | - | chr2_2:16543549-16543568 | None:intergenic | 45.0% | |
TGTCCCAACATGTCACATGT+TGG | - | chr2_2:16543830-16543849 | None:intergenic | 45.0% | |
ACATGTGACATGTTGGGACA+CGG | + | chr2_2:16543830-16543849 | Msa0241100:intron | 45.0% | |
! | CTTCATATTGAAGGCGTGTC+TGG | - | chr2_2:16545157-16545176 | None:intergenic | 45.0% |
GCTTGACTACTAGGAACTAC+TGG | + | chr2_2:16545275-16545294 | Msa0241100:intron | 45.0% | |
AGGAACTACTGGAAAACCCA+AGG | + | chr2_2:16545286-16545305 | Msa0241100:intron | 45.0% | |
GGAACTACTGGAAAACCCAA+GGG | + | chr2_2:16545287-16545306 | Msa0241100:intron | 45.0% | |
TGGCTTATTGTGACTCCCTT+GGG | - | chr2_2:16545305-16545324 | None:intergenic | 45.0% | |
ATGGCTTATTGTGACTCCCT+TGG | - | chr2_2:16545306-16545325 | None:intergenic | 45.0% | |
AACTATGGCGATCTTGGCTA+GGG | - | chr2_2:16545348-16545367 | None:intergenic | 45.0% | |
CGCCATAGTTGGATATAGTG+AGG | + | chr2_2:16545358-16545377 | Msa0241100:CDS | 45.0% | |
ATGCCATTCCCTGTTACATC+CGG | + | chr2_2:16545388-16545407 | Msa0241100:intron | 45.0% | |
AAACCGGATGTAACAGGGAA+TGG | - | chr2_2:16545394-16545413 | None:intergenic | 45.0% | |
ACAACCTCCAACCATAAGCA+TGG | - | chr2_2:16545640-16545659 | None:intergenic | 45.0% | |
CTTTGATAAGCTCAAGCGAG+AGG | - | chr2_2:16546029-16546048 | None:intergenic | 45.0% | |
! | CAACCACAAGGTGTTTGTGT+TGG | + | chr2_2:16546610-16546629 | Msa0241100:CDS | 45.0% |
TTGCCAACACAAACACCTTG+TGG | - | chr2_2:16546616-16546635 | None:intergenic | 45.0% | |
! | ACAAGGTGTTTGTGTTGGCA+AGG | + | chr2_2:16546615-16546634 | Msa0241100:CDS | 45.0% |
AATGGTCGCATCAAAAGTGG+TGG | + | chr2_2:16546835-16546854 | Msa0241100:CDS | 45.0% | |
ATGGTCGCATCAAAAGTGGT+GGG | + | chr2_2:16546836-16546855 | Msa0241100:CDS | 45.0% | |
GGAGAACATTTACCCTGAAG+AGG | + | chr2_2:16546858-16546877 | Msa0241100:CDS | 45.0% | |
ATCCTTCGAAAGGGATACAC+AGG | + | chr2_2:16546972-16546991 | Msa0241100:intron | 45.0% | |
GCTGACCGATCTCAAATCAA+TGG | - | chr2_2:16547105-16547124 | None:intergenic | 45.0% | |
!! | AAGGGCTTGTTGTGTAGTCT+TGG | + | chr2_2:16547289-16547308 | Msa0241100:intron | 45.0% |
ATCTCTGTGAAACGTGCATC+TGG | - | chr2_2:16547414-16547433 | None:intergenic | 45.0% | |
AGATGCACGTTTCACAGAGA+TGG | + | chr2_2:16547413-16547432 | Msa0241100:CDS | 45.0% | |
!! | ATTTTTCCCGTGGTAGTGAG+TGG | - | chr2_2:16547731-16547750 | None:intergenic | 45.0% |
AAGAAGAGACCAAGTCCGAA+AGG | + | chr2_2:16547751-16547770 | Msa0241100:CDS | 45.0% | |
! | AACTCTCCGGCGAGATTTTC+CGG | + | chr2_2:16542937-16542956 | Msa0241100:CDS | 50.0% |
! | GATTTTCCGGTGACCATTGC+CGG | + | chr2_2:16542950-16542969 | Msa0241100:CDS | 50.0% |
TTGTTTCCGGCAATGGTCAC+CGG | - | chr2_2:16542959-16542978 | None:intergenic | 50.0% | |
CTTGCGATTGTTTCCGGCAA+TGG | - | chr2_2:16542966-16542985 | None:intergenic | 50.0% | |
CCCTGTCTTGCGATTGTTTC+CGG | - | chr2_2:16542972-16542991 | None:intergenic | 50.0% | |
CCGGAAACAATCGCAAGACA+GGG | + | chr2_2:16542969-16542988 | Msa0241100:CDS | 50.0% | |
!! | GAAGTGGTGTCACTAGCACA+TGG | + | chr2_2:16543007-16543026 | Msa0241100:CDS | 50.0% |
GAGATGGCTACAACATCTCC+TGG | - | chr2_2:16543055-16543074 | None:intergenic | 50.0% | |
AACTACTCATGGGCAGCTGA+AGG | + | chr2_2:16544879-16544898 | Msa0241100:CDS | 50.0% | |
AACCATATGTCATGTCGGCG+TGG | + | chr2_2:16545111-16545130 | Msa0241100:intron | 50.0% | |
CAACTATGGCGATCTTGGCT+AGG | - | chr2_2:16545349-16545368 | None:intergenic | 50.0% | |
CTAGCCAAGATCGCCATAGT+TGG | + | chr2_2:16545347-16545366 | Msa0241100:CDS | 50.0% | |
! | TGGTGGTTTGTCATCTGCCA+TGG | + | chr2_2:16545614-16545633 | Msa0241100:CDS | 50.0% |
ATCTGCCATGGCCATGCTTA+TGG | + | chr2_2:16545626-16545645 | Msa0241100:CDS | 50.0% | |
TCCAACCATAAGCATGGCCA+TGG | - | chr2_2:16545634-16545653 | None:intergenic | 50.0% | |
ATGGCCATGCTTATGGTTGG+AGG | + | chr2_2:16545633-16545652 | Msa0241100:CDS | 50.0% | |
AGGCGCAAAGACAACTGGAA+AGG | + | chr2_2:16545964-16545983 | Msa0241100:intron | 50.0% | |
GGCGCAAAGACAACTGGAAA+GGG | + | chr2_2:16545965-16545984 | Msa0241100:intron | 50.0% | |
GCGCAAAGACAACTGGAAAG+GGG | + | chr2_2:16545966-16545985 | Msa0241100:CDS | 50.0% | |
CGCAAAGACAACTGGAAAGG+GGG | + | chr2_2:16545967-16545986 | Msa0241100:CDS | 50.0% | |
CTTGACCCAATGTTGCCTAG+AGG | + | chr2_2:16546104-16546123 | Msa0241100:intron | 50.0% | |
GCATCGGATCATACAGCGTT+AGG | - | chr2_2:16546528-16546547 | None:intergenic | 50.0% | |
ATATGCAAAGACGGTGACGC+AGG | + | chr2_2:16546661-16546680 | Msa0241100:CDS | 50.0% | |
GAGGGCCACATTTAATGCTC+AGG | + | chr2_2:16546698-16546717 | Msa0241100:CDS | 50.0% | |
! | CATGGTAACTTGTGGCTCCT+TGG | + | chr2_2:16546805-16546824 | Msa0241100:CDS | 50.0% |
TGGCTCCTTGGACGTACAAA+TGG | + | chr2_2:16546817-16546836 | Msa0241100:CDS | 50.0% | |
TGCGACCATTTGTACGTCCA+AGG | - | chr2_2:16546825-16546844 | None:intergenic | 50.0% | |
TGGTCGCATCAAAAGTGGTG+GGG | + | chr2_2:16546837-16546856 | Msa0241100:CDS | 50.0% | |
CACCTGTGTATCCCTTTCGA+AGG | - | chr2_2:16546977-16546996 | None:intergenic | 50.0% | |
! | GCCTTTTCCACTCACTACCA+CGG | + | chr2_2:16547721-16547740 | Msa0241100:CDS | 50.0% |
! | CCTTTTCCACTCACTACCAC+GGG | + | chr2_2:16547722-16547741 | Msa0241100:CDS | 50.0% |
AAGAGACCAAGTCCGAAAGG+AGG | + | chr2_2:16547754-16547773 | Msa0241100:CDS | 50.0% | |
ACAGAACCTCCTTTCGGACT+TGG | - | chr2_2:16547763-16547782 | None:intergenic | 50.0% | |
GCTCAGACAGAACCTCCTTT+CGG | - | chr2_2:16547769-16547788 | None:intergenic | 50.0% | |
TGGTCACCGGAAAATCTCGC+CGG | - | chr2_2:16542946-16542965 | None:intergenic | 55.0% | |
GCCGGAAACAATCGCAAGAC+AGG | + | chr2_2:16542968-16542987 | Msa0241100:CDS | 55.0% | |
TCGCAAGACAGGGCAACAGT+TGG | + | chr2_2:16542979-16542998 | Msa0241100:CDS | 55.0% | |
CAAGACAGGGCAACAGTTGG+TGG | + | chr2_2:16542982-16543001 | Msa0241100:CDS | 55.0% | |
!! | GCAACAGTTGGTGGAGGAAG+TGG | + | chr2_2:16542991-16543010 | Msa0241100:CDS | 55.0% |
AGCACATGGTCTTCTCCACC+TGG | + | chr2_2:16543021-16543040 | Msa0241100:CDS | 55.0% | |
GCACATGGTCTTCTCCACCT+GGG | + | chr2_2:16543022-16543041 | Msa0241100:CDS | 55.0% | |
GCCATGGCCATGCTTATGGT+TGG | + | chr2_2:16545630-16545649 | Msa0241100:CDS | 55.0% | |
! | CCCGTGGTAGTGAGTGGAAA+AGG | - | chr2_2:16547725-16547744 | None:intergenic | 55.0% |
!! | GACAGGGCAACAGTTGGTGG+AGG | + | chr2_2:16542985-16543004 | Msa0241100:CDS | 60.0% |
CATCTCCTGGTGTGACACCC+AGG | - | chr2_2:16543042-16543061 | None:intergenic | 60.0% | |
CGCCACGCCGACATGACATA+TGG | - | chr2_2:16545116-16545135 | None:intergenic | 60.0% | |
! | CTCCACCTGGGTGTCACACC+AGG | + | chr2_2:16543034-16543053 | Msa0241100:CDS | 65.0% |
CTCCTGGTGTGACACCCAGG+TGG | - | chr2_2:16543039-16543058 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 16542829 | 16548027 | 16542829 | ID=Msa0241100;Name=Msa0241100 |
chr2_2 | mRNA | 16542829 | 16548027 | 16542829 | ID=Msa0241100-mRNA-1;Parent=Msa0241100;Name=Msa0241100-mRNA-1;_AED=0.24;_eAED=0.24;_QI=73|1|1|1|1|1|10|213|554 |
chr2_2 | exon | 16542829 | 16543086 | 16542829 | ID=Msa0241100-mRNA-1:exon:6786;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16544327 | 16544399 | 16544327 | ID=Msa0241100-mRNA-1:exon:6787;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16544549 | 16544717 | 16544549 | ID=Msa0241100-mRNA-1:exon:6788;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16544829 | 16544927 | 16544829 | ID=Msa0241100-mRNA-1:exon:6789;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16545288 | 16545385 | 16545288 | ID=Msa0241100-mRNA-1:exon:6790;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16545582 | 16545775 | 16545582 | ID=Msa0241100-mRNA-1:exon:6791;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16545966 | 16546093 | 16545966 | ID=Msa0241100-mRNA-1:exon:6792;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16546494 | 16546879 | 16546494 | ID=Msa0241100-mRNA-1:exon:6793;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16547354 | 16547556 | 16547354 | ID=Msa0241100-mRNA-1:exon:6794;Parent=Msa0241100-mRNA-1 |
chr2_2 | exon | 16547685 | 16548027 | 16547685 | ID=Msa0241100-mRNA-1:exon:6795;Parent=Msa0241100-mRNA-1 |
chr2_2 | five_prime_UTR | 16542829 | 16542901 | 16542829 | ID=Msa0241100-mRNA-1:five_prime_utr;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16542902 | 16543086 | 16542902 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16544327 | 16544399 | 16544327 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16544549 | 16544717 | 16544549 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16544829 | 16544927 | 16544829 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16545288 | 16545385 | 16545288 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16545582 | 16545775 | 16545582 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16545966 | 16546093 | 16545966 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16546494 | 16546879 | 16546494 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16547354 | 16547556 | 16547354 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | CDS | 16547685 | 16547814 | 16547685 | ID=Msa0241100-mRNA-1:cds;Parent=Msa0241100-mRNA-1 |
chr2_2 | three_prime_UTR | 16547815 | 16548027 | 16547815 | ID=Msa0241100-mRNA-1:three_prime_utr;Parent=Msa0241100-mRNA-1 |
Gene Sequence |
Protein sequence |