AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0318580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318580 MtrunA17_Chr2g0292471 93.262 564 28 1 1 554 1 564 0.0 1093
Msa0318580 MtrunA17_Chr6g0471921 27.042 551 348 15 4 546 10 514 2.66e-37 144
Msa0318580 MtrunA17_Chr2g0327341 25.794 535 330 14 29 547 56 539 1.11e-36 143
Msa0318580 MtrunA17_Chr5g0409771 26.654 544 313 14 31 547 71 555 9.03e-36 140
Msa0318580 MtrunA17_Chr1g0180551 27.122 483 294 13 21 476 113 564 1.69e-35 140
Msa0318580 MtrunA17_Chr1g0180541 26.038 530 334 16 26 539 54 541 5.29e-35 138
Msa0318580 MtrunA17_Chr5g0433231 25.098 510 340 13 48 541 60 543 1.16e-33 134
Msa0318580 MtrunA17_Chr4g0000461 26.448 518 323 12 40 543 65 538 3.55e-33 133
Msa0318580 MtrunA17_Chr5g0396331 26.000 550 352 16 8 540 20 531 2.24e-32 130
Msa0318580 MtrunA17_Chr3g0109731 26.497 551 326 19 27 540 39 547 7.10e-32 129
Msa0318580 MtrunA17_Chr5g0433241 25.678 553 362 16 8 541 20 542 8.64e-32 129
Msa0318580 MtrunA17_Chr4g0039791 25.512 537 328 13 32 547 76 561 1.18e-31 129
Msa0318580 MtrunA17_Chr4g0028411 25.996 527 336 14 32 549 59 540 3.79e-31 127
Msa0318580 MtrunA17_Chr5g0409791 26.190 546 323 16 32 547 73 568 6.33e-31 127
Msa0318580 MtrunA17_Chr5g0395431 25.813 523 325 17 40 545 109 585 4.00e-30 124
Msa0318580 MtrunA17_Chr5g0396311 25.788 539 346 17 29 550 41 542 1.39e-28 119
Msa0318580 MtrunA17_Chr4g0068151 23.105 541 370 14 22 542 40 554 6.84e-28 117
Msa0318580 MtrunA17_Chr8g0370701 25.532 564 345 18 8 542 62 579 1.51e-27 117
Msa0318580 MtrunA17_Chr5g0433221 23.529 510 348 13 48 541 60 543 2.14e-27 116
Msa0318580 MtrunA17_Chr2g0301671 23.133 549 360 18 22 542 40 554 2.27e-27 116
Msa0318580 MtrunA17_Chr1g0197391 27.669 459 260 17 32 465 87 498 9.25e-27 114
Msa0318580 MtrunA17_Chr4g0004101 27.042 355 199 13 218 546 10 330 1.61e-26 110
Msa0318580 MtrunA17_Chr1g0157401 24.432 528 354 13 29 547 69 560 3.41e-24 106
Msa0318580 MtrunA17_Chr6g0471311 23.930 514 343 16 48 541 60 545 4.65e-24 106
Msa0318580 MtrunA17_Chr8g0353341 25.486 463 286 12 29 465 66 495 1.51e-23 104
Msa0318580 MtrunA17_Chr4g0072561 25.789 570 332 25 7 547 37 544 1.71e-23 104
Msa0318580 MtrunA17_Chr5g0406681 24.138 580 339 20 8 545 47 567 1.98e-22 101
Msa0318580 MtrunA17_Chr4g0004841 29.388 245 137 10 310 546 123 339 4.23e-22 97.8
Msa0318580 MtrunA17_Chr8g0370731 24.031 387 246 10 169 542 139 490 2.47e-21 97.4
Msa0318580 MtrunA17_Chr3g0116251 23.005 426 265 10 128 539 172 548 1.17e-20 95.5
Msa0318580 MtrunA17_Chr3g0116271 23.256 387 238 9 171 539 205 550 6.21e-20 93.6
Msa0318580 MtrunA17_Chr3g0102411 23.713 544 341 18 29 552 57 546 6.54e-20 93.2
Msa0318580 MtrunA17_Chr1g0186071 23.666 431 261 11 128 544 177 553 1.71e-17 85.9
Msa0318580 MtrunA17_Chr2g0334131 25.949 316 188 8 238 543 1 280 3.90e-17 82.0
Msa0318580 MtrunA17_Chr1g0157431 26.523 279 188 8 29 298 69 339 6.74e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318580 AT1G30520.2 56.383 564 223 7 3 554 8 560 0.0 651
Msa0318580 AT1G30520.1 56.383 564 223 7 3 554 8 560 0.0 651
Msa0318580 AT1G30520.3 58.242 455 167 7 3 445 8 451 0.0 533
Msa0318580 AT1G30520.4 58.242 455 167 7 3 445 8 451 0.0 533
Msa0318580 AT3G21240.1 28.571 525 316 13 40 549 76 556 1.47e-40 155
Msa0318580 AT3G21240.2 30.474 443 263 11 40 467 76 488 1.46e-37 145
Msa0318580 AT3G21240.3 30.474 443 263 11 40 467 76 488 1.46e-37 145
Msa0318580 AT4G05160.1 25.480 573 336 18 8 547 30 544 3.10e-34 136
Msa0318580 AT1G66120.1 25.741 540 349 16 22 540 34 542 8.61e-34 135
Msa0318580 AT4G19010.1 26.629 537 316 17 37 549 82 564 3.64e-33 134
Msa0318580 AT1G21540.1 25.144 521 328 18 46 541 61 544 2.04e-32 131
Msa0318580 AT3G48990.1 27.202 511 311 16 48 546 52 513 2.57e-32 130
Msa0318580 AT1G65880.1 25.853 557 335 19 22 540 34 550 2.91e-32 131
Msa0318580 AT1G20480.1 26.376 527 327 14 37 547 84 565 1.35e-31 129
Msa0318580 AT1G65890.1 25.551 544 352 16 22 540 34 549 2.01e-31 129
Msa0318580 AT1G21530.2 23.938 518 337 16 46 541 61 543 2.03e-31 128
Msa0318580 AT1G21530.1 23.791 517 337 15 46 541 61 541 2.34e-31 128
Msa0318580 AT3G21230.1 25.142 529 321 16 40 543 86 564 4.73e-30 124
Msa0318580 AT1G77240.1 24.085 519 332 17 46 541 60 539 8.08e-30 124
Msa0318580 AT1G51680.1 26.945 527 323 15 40 547 78 561 9.52e-30 123
Msa0318580 AT3G21230.3 25.847 472 289 14 40 486 86 521 1.21e-28 120
Msa0318580 AT5G16340.1 24.231 553 365 19 8 540 20 538 2.04e-28 119
Msa0318580 AT3G16170.1 26.933 401 234 14 169 543 237 604 2.34e-28 120
Msa0318580 AT3G16910.1 22.669 547 366 15 22 542 42 557 6.77e-28 118
Msa0318580 AT3G21230.2 26.562 448 268 14 40 462 86 497 1.37e-27 116
Msa0318580 AT1G20510.1 24.008 529 355 11 22 540 47 538 2.07e-27 116
Msa0318580 AT5G16370.1 24.044 549 373 16 8 541 20 539 3.00e-27 116
Msa0318580 AT1G51680.3 27.682 466 289 13 40 486 78 514 5.93e-27 115
Msa0318580 AT1G51680.2 28.507 442 268 13 40 462 78 490 1.11e-26 114
Msa0318580 AT1G65060.1 23.285 554 361 15 7 543 54 560 1.89e-26 114
Msa0318580 AT1G20560.1 23.929 560 361 16 8 542 22 541 2.65e-26 113
Msa0318580 AT1G20510.2 25.167 449 304 8 22 461 47 472 3.52e-26 112
Msa0318580 AT1G75960.1 22.980 557 369 17 8 541 20 539 2.11e-25 110
Msa0318580 AT2G17650.1 24.126 572 370 15 8 550 67 603 9.27e-25 108
Msa0318580 AT1G76290.1 23.277 537 357 14 22 541 34 532 1.30e-23 105
Msa0318580 AT1G20500.1 24.427 393 247 9 166 547 197 550 2.40e-22 101
Msa0318580 AT5G38120.1 24.873 394 242 10 166 547 199 550 2.77e-21 97.8
Msa0318580 AT1G20560.2 24.866 374 257 9 168 540 111 461 6.14e-21 96.3
Msa0318580 AT5G38120.3 25.484 310 195 6 166 465 199 482 5.72e-20 93.6
Msa0318580 AT5G63380.1 24.000 425 260 13 70 476 122 501 6.87e-20 93.6
Msa0318580 AT1G65060.2 23.841 453 295 12 7 442 54 473 1.18e-19 92.8
Msa0318580 AT1G20510.3 24.299 428 292 8 22 440 47 451 1.74e-19 92.0
Msa0318580 AT5G38120.4 25.490 306 192 6 166 461 199 478 5.64e-19 90.5
Msa0318580 AT5G38120.2 25.490 306 192 6 166 461 199 478 5.64e-19 90.5
Msa0318580 AT1G68270.1 24.319 551 320 19 22 540 34 519 1.34e-18 89.7
Msa0318580 AT3G21230.4 26.110 383 222 14 40 397 86 432 3.59e-16 81.6
Msa0318580 AT1G62940.1 24.624 532 332 16 32 545 58 538 6.27e-16 81.3
Msa0318580 AT3G23790.1 25.694 288 169 10 288 551 455 721 1.43e-11 67.8
Msa0318580 AT5G35930.1 21.354 384 269 10 173 541 109 474 2.36e-11 67.4
Msa0318580 AT4G23850.1 22.638 508 320 16 28 481 80 568 3.88e-11 66.2
Msa0318580 AT5G35930.4 22.857 385 248 14 173 534 201 559 4.32e-11 66.6

Find 148 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAATAAGCTTAGCTTTA+TGG 0.023963 2_4:+17615723 None:intergenic
GTGTCTTTGCTTAATTATTA+TGG 0.202044 2_4:-17621590 Msa0318580:exon
AATTTATCAACCGAACAAAT+TGG 0.212340 2_4:+17613855 None:intergenic
GCTAAGCTTATTTCAGCTTA+TGG 0.243792 2_4:-17615716 Msa0318580:intron
CTCCATTCAATGAATATCTT+TGG 0.260778 2_4:+17614121 None:intergenic
CTCGACTTTATTACCTCTTC+AGG 0.267324 2_4:+17614915 None:intergenic
CACATTTAATGCTCAGGTAT+TGG 0.279874 2_4:-17615082 Msa0318580:CDS
CTTACCCAACGATAATTTAG+AGG 0.298272 2_4:+17617423 None:intergenic
ACATTTAATGCTCAGGTATT+GGG 0.304553 2_4:-17615081 Msa0318580:CDS
ATTTATCAACCGAACAAATT+GGG 0.320500 2_4:+17613856 None:intergenic
TGTTGCCTCTTAAGCATTCC+TGG 0.321712 2_4:+17616968 None:intergenic
ATCTGCCATGGCCATGCTTA+TGG 0.322023 2_4:-17616179 Msa0318580:CDS
TGAGTCGATTGTTAACTTTC+CGG 0.324819 2_4:-17621549 Msa0318580:CDS
GTCATAATCTGCTTCACTTC+AGG 0.329764 2_4:-17616899 Msa0318580:intron
CCAGTCTTATTTCTATTGTT+AGG 0.336433 2_4:-17616051 Msa0318580:intron
TGAAGATCAAATTAACATAT+TGG 0.339772 2_4:+17613805 None:intergenic
GCATTGGATCATATAGTGTT+AGG 0.339838 2_4:+17615261 None:intergenic
CATGGTAACTTGTGGCTCCT+TGG 0.350157 2_4:-17614981 Msa0318580:CDS
ATGGCTTATTGCGACTCCCT+TGG 0.370319 2_4:+17616502 None:intergenic
TTATTAGCTATTGCATTTGT+TGG 0.372199 2_4:-17617459 Msa0318580:CDS
GTATCCAACCAAGAGAAAAT+TGG 0.375134 2_4:-17614368 Msa0318580:CDS
ATCCTCACTATATCCAACTA+TGG 0.378252 2_4:+17616445 None:intergenic
CAGATTATGACAGCTCCTTC+AGG 0.398236 2_4:+17616911 None:intergenic
CTTGCGGTTGTTTCCCGCAA+TGG 0.405395 2_4:+17621510 None:intergenic
TGGCTTATTGCGACTCCCTT+GGG 0.405464 2_4:+17616503 None:intergenic
AGCACATGGTCTTCTCCAGC+TGG 0.405857 2_4:-17621452 Msa0318580:CDS
ATATCCAACTATGGCAATCT+TGG 0.407023 2_4:+17616454 None:intergenic
CCTGTAGTAGTGAGTGGAAA+AGG 0.414434 2_4:+17614094 None:intergenic
ACTGCTCCATTATGTCATAT+TGG 0.416710 2_4:-17616211 Msa0318580:CDS
CCACAGAACCCCAATTTGTT+CGG 0.417637 2_4:-17613865 Msa0318580:intron
TGGCTCCTTGGGCGTACAAA+TGG 0.418639 2_4:-17614969 Msa0318580:CDS
AAACCACCAATATGACATAA+TGG 0.421628 2_4:+17616205 None:intergenic
ATTTCTGTGAAACGTGCATT+TGG 0.423131 2_4:+17614402 None:intergenic
TTGATGCAAAATTAGCTGTT+GGG 0.425782 2_4:-17616126 Msa0318580:CDS
AAATGCACGTTTCACAGAAA+TGG 0.431013 2_4:-17614400 Msa0318580:CDS
TCTTCACCATATGTTTGAAA+AGG 0.438172 2_4:+17615221 None:intergenic
ATAAGACTGGTCATTATTGC+AGG 0.438560 2_4:+17616064 None:intergenic
CTCTAGAATTTAACTACTCA+TGG 0.440010 2_4:-17616937 Msa0318580:CDS
CTCCAGCTGGGTGTCACACC+AGG 0.440197 2_4:-17621439 Msa0318580:CDS
ATGGTAACTTGTGGCTCCTT+GGG 0.445440 2_4:-17614980 Msa0318580:CDS
ACAGAACCTCCTTTCGGACT+TGG 0.445695 2_4:+17614056 None:intergenic
TACCAAAGATATTCATTGAA+TGG 0.447730 2_4:-17614123 Msa0318580:CDS
TGCTCCTCTAAATTATCGTT+GGG 0.451852 2_4:-17617427 Msa0318580:intron
GGAATTATACTTTCAGATAG+AGG 0.452658 2_4:-17613951 Msa0318580:three_prime_UTR
ACAGTGATTTGTATCTAGAA+TGG 0.461349 2_4:-17617482 Msa0318580:intron
TAGAGAACTACACAAATGTA+TGG 0.467067 2_4:-17613972 Msa0318580:three_prime_UTR
CAAATCAGAGGAATGAAGTC+TGG 0.467474 2_4:-17615037 Msa0318580:CDS
TGGTTGGTGAATAAGATGTT+TGG 0.467627 2_4:+17615193 None:intergenic
CTAGCCAAGATTGCCATAGT+TGG 0.468087 2_4:-17616458 Msa0318580:CDS
GCGGGAAACAACCGCAAGAC+AGG 0.469645 2_4:-17621505 Msa0318580:CDS
AATGAAGTCTGGTTTGATAC+CGG 0.470147 2_4:-17615026 Msa0318580:CDS
ACTGTATGATCAAAGCTTCA+TGG 0.471609 2_4:+17616483 None:intergenic
TCGACTTTATTACCTCTTCA+GGG 0.471877 2_4:+17614916 None:intergenic
GCTCCATTATGTCATATTGG+TGG 0.476324 2_4:-17616208 Msa0318580:CDS
CTGCTCCTCTAAATTATCGT+TGG 0.476833 2_4:-17617428 Msa0318580:CDS
CACCATATGTTTGAAAAGGA+TGG 0.478683 2_4:+17615225 None:intergenic
GCTCAGACAGAACCTCCTTT+CGG 0.481138 2_4:+17614050 None:intergenic
TGTTCTTCAGTGCTGACTCC+AGG 0.482882 2_4:-17616986 Msa0318580:intron
GCAACAGTTGGTGGAGGAAG+TGG 0.484568 2_4:-17621482 Msa0318580:CDS
TGTTTGAAAAGGATGGCTAA+TGG 0.486072 2_4:+17615232 None:intergenic
CAAGACAGGGCAACAGTTGG+TGG 0.486305 2_4:-17621491 Msa0318580:CDS
TTGTTTGTAAAATCTGAAGA+AGG 0.488073 2_4:+17617118 None:intergenic
TTGATGAGAGCTGCTATTCA+TGG 0.488273 2_4:-17617201 Msa0318580:CDS
TTTGATGCAAAATTAGCTGT+TGG 0.494174 2_4:-17616127 Msa0318580:CDS
GCTTGACTACTAGGAACTAC+TGG 0.496193 2_4:-17616530 Msa0318580:intron
ATAACAACACTTGCAATCCC+TGG 0.500860 2_4:+17614435 None:intergenic
GAGGGCCACATTTAATGCTC+AGG 0.501334 2_4:-17615088 Msa0318580:CDS
TAGCCATCTCTGCTTACAAC+AGG 0.504818 2_4:-17621408 Msa0318580:intron
CAACTATGGCAATCTTGGCT+AGG 0.510566 2_4:+17616459 None:intergenic
GGCGCAAAGAAACCTGGAAA+GGG 0.515036 2_4:-17615823 Msa0318580:CDS
ATTGCAAGTGTTGTTATTGT+GGG 0.516175 2_4:-17614429 Msa0318580:CDS
TGACTCCAGGAATGCTTAAG+AGG 0.516480 2_4:-17616973 Msa0318580:CDS
TTAGCTATTGCATTTGTTGG+AGG 0.516957 2_4:-17617456 Msa0318580:CDS
CTTTGCATAGTAATCTCTGA+TGG 0.518697 2_4:-17614021 Msa0318580:exon
TGTGTAGTTCTCTAGAAAGC+AGG 0.519982 2_4:+17613981 None:intergenic
TTGTTTCCCGCAATGGTCAC+CGG 0.520558 2_4:+17621517 None:intergenic
GCAATTCTACTAGAACATCC+AGG 0.521231 2_4:-17614453 Msa0318580:CDS
CACCTGGTGTGACACCCAGC+TGG 0.525086 2_4:+17621437 None:intergenic
GTACCTGTTGTAAGCAGAGA+TGG 0.525957 2_4:+17621405 None:intergenic
GCCATGGCCATGCTTATGGT+TGG 0.531450 2_4:-17616175 Msa0318580:CDS
ACTGTCAAGAAAATACTCAA+TGG 0.532429 2_4:-17615794 Msa0318580:CDS
TGATGCAAAATTAGCTGTTG+GGG 0.535858 2_4:-17616125 Msa0318580:CDS
AACTATGGCAATCTTGGCTA+GGG 0.537225 2_4:+17616460 None:intergenic
TGTTTGTAAAATCTGAAGAA+GGG 0.537233 2_4:+17617119 None:intergenic
TTTATCAACCGAACAAATTG+GGG 0.539762 2_4:+17613857 None:intergenic
GAACTGAAGATATGCAAAGA+TGG 0.540296 2_4:-17615134 Msa0318580:CDS
ATGGCCATGCTTATGGTTGG+AGG 0.545761 2_4:-17616172 Msa0318580:CDS
ATGAAGTCTGGTTTGATACC+GGG 0.546377 2_4:-17615025 Msa0318580:CDS
ATGGTCGCATCAAGAGTGGT+GGG 0.551960 2_4:-17614950 Msa0318580:CDS
GATTGCAAGTGTTGTTATTG+TGG 0.552894 2_4:-17614430 Msa0318580:CDS
CTGATTTGATGTGTTTGCGA+GGG 0.555268 2_4:+17615052 None:intergenic
AGAAAGTTGTGCTATCACTT+TGG 0.555479 2_4:-17621614 Msa0318580:five_prime_UTR
ATATGCAAAGATGGTAACAC+TGG 0.558329 2_4:-17615125 Msa0318580:CDS
CCAACTGTTGCCCTGTCTTG+CGG 0.559424 2_4:+17621494 None:intergenic
AAGAAAATACTCAATGGAGG+TGG 0.563554 2_4:-17615788 Msa0318580:CDS
CATATCTTCAGTTCTACATG+AGG 0.564188 2_4:+17615143 None:intergenic
TGGTGGTTTGTCATCTGCCA+TGG 0.564769 2_4:-17616191 Msa0318580:CDS
TGGTTTGATACCGGGGACAA+TGG 0.566114 2_4:-17615017 Msa0318580:CDS
ATCCGTTGATCCATTGTCCC+CGG 0.567696 2_4:+17615007 None:intergenic
CATGAGTAGTTAAATTCTAG+AGG 0.567872 2_4:+17616938 None:intergenic
TCATCAATCACTAACATCAC+TGG 0.571349 2_4:+17617217 None:intergenic
GTTTGTAAAATCTGAAGAAG+GGG 0.572184 2_4:+17617120 None:intergenic
AAGAAGAGACCAAGTCCGAA+AGG 0.576659 2_4:-17614065 Msa0318580:CDS
TGCGACCATTTGTACGCCCA+AGG 0.577907 2_4:+17614964 None:intergenic
GCACATGGTCTTCTCCAGCT+GGG 0.580437 2_4:-17621451 Msa0318580:CDS
TCCAACCATAAGCATGGCCA+TGG 0.582247 2_4:+17616174 None:intergenic
GACAGGGCAACAGTTGGTGG+AGG 0.586860 2_4:-17621488 Msa0318580:CDS
CCTAACAATAGAAATAAGAC+TGG 0.589722 2_4:+17616051 None:intergenic
CGGGAAACAACCGCAAGACA+GGG 0.594773 2_4:-17621504 Msa0318580:CDS
CAACCACAAGGTGTCTGTGT+TGG 0.596103 2_4:-17615176 Msa0318580:CDS
TATTTCTAAAGTGACTAGAC+TGG 0.597212 2_4:-17613903 Msa0318580:intron
AGGCGCAAAGAAACCTGGAA+AGG 0.602092 2_4:-17615824 Msa0318580:CDS
TCTAGAATTTAACTACTCAT+GGG 0.603181 2_4:-17616936 Msa0318580:CDS
AATGGTCGCATCAAGAGTGG+TGG 0.604388 2_4:-17614951 Msa0318580:CDS
CGGATTGTCATGGTAACTTG+TGG 0.606619 2_4:-17614989 Msa0318580:CDS
AACTACTCATGGGCACCTGA+AGG 0.606864 2_4:-17616926 Msa0318580:CDS
CTTTGATAAGCTCAAGCGAG+AGG 0.607816 2_4:+17615762 None:intergenic
CGCAAAGAAACCTGGAAAGG+GGG 0.608439 2_4:-17615821 Msa0318580:CDS
AACCAAGAGAAAATTGGCAA+TGG 0.613758 2_4:-17614362 Msa0318580:CDS
TACCGGGGACAATGGATCAA+CGG 0.617590 2_4:-17615009 Msa0318580:CDS
AGTTCTCTAGAAAGCAGGAT+GGG 0.619015 2_4:+17613986 None:intergenic
TGGTCACCGGAAAATCTCGC+CGG 0.621440 2_4:+17621530 None:intergenic
AGGAACTACTGGAAAACCCA+AGG 0.622099 2_4:-17616519 Msa0318580:CDS
CCGCAAGACAGGGCAACAGT+TGG 0.624550 2_4:-17621494 Msa0318580:CDS
CAATTCTACTAGAACATCCA+GGG 0.626169 2_4:-17614452 Msa0318580:CDS
GGAGAACATTTACCCTGAAG+AGG 0.630009 2_4:-17614928 Msa0318580:intron
TTGCCAACACAGACACCTTG+TGG 0.630921 2_4:+17615173 None:intergenic
CATCTTATTCACCAACCACA+AGG 0.631076 2_4:-17615188 Msa0318580:CDS
TGAAGTCTGGTTTGATACCG+GGG 0.632926 2_4:-17615024 Msa0318580:CDS
ACAAATGGTCGCATCAAGAG+TGG 0.633363 2_4:-17614954 Msa0318580:CDS
GTCAAGAAAATACTCAATGG+AGG 0.634780 2_4:-17615791 Msa0318580:CDS
TGCCATAGTTGGATATAGTG+AGG 0.637714 2_4:-17616447 Msa0318580:CDS
GAGATGGCTACAACATCACC+TGG 0.638785 2_4:+17621421 None:intergenic
GCGCAAAGAAACCTGGAAAG+GGG 0.640363 2_4:-17615822 Msa0318580:CDS
AAGAGACCAAGTCCGAAAGG+AGG 0.641225 2_4:-17614062 Msa0318580:CDS
TAGTTCTCTAGAAAGCAGGA+TGG 0.642146 2_4:+17613985 None:intergenic
AATGGATCAACGGATTGTCA+TGG 0.645238 2_4:-17614999 Msa0318580:CDS
ACAACCTCCAACCATAAGCA+TGG 0.645717 2_4:+17616168 None:intergenic
ACAAGGTGTCTGTGTTGGCA+AGG 0.653770 2_4:-17615171 Msa0318580:CDS
TCTGATTTGATGTGTTTGCG+AGG 0.653877 2_4:+17615051 None:intergenic
CAACACAGACACCTTGTGGT+TGG 0.656909 2_4:+17615177 None:intergenic
TCGCAAACACATCAAATCAG+AGG 0.659722 2_4:-17615049 Msa0318580:CDS
TATGCAAAGATGGTAACACT+GGG 0.669218 2_4:-17615124 Msa0318580:CDS
CAATACCTGAGCATTAAATG+TGG 0.673624 2_4:+17615083 None:intergenic
GGAACTACTGGAAAACCCAA+GGG 0.690505 2_4:-17616518 Msa0318580:CDS
TGGTCGCATCAAGAGTGGTG+GGG 0.699794 2_4:-17614949 Msa0318580:CDS
GAAGTGGTGTCACTAGCACA+TGG 0.705392 2_4:-17621466 Msa0318580:CDS
AGTTAGCAATGAAAGCAGTG+AGG 0.758739 2_4:-17617240 Msa0318580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATATATATAATTTAAT+TGG - chr2_4:17616405-17616424 Msa0318580:intron 0.0%
!! TAAAATAAAATAAAAATAAA+AGG - chr2_4:17617535-17617554 Msa0318580:intron 0.0%
!! TATTAAATTATATTCATCTA+TGG - chr2_4:17614071-17614090 Msa0318580:CDS 10.0%
!!! TATTTAGTTTTTTTTTGAAA+AGG - chr2_4:17614403-17614422 Msa0318580:CDS 10.0%
!! TTTATAATCAAAATTTAAGA+AGG - chr2_4:17614472-17614491 Msa0318580:intron 10.0%
!! TTATAATCAAAATTTAAGAA+GGG - chr2_4:17614473-17614492 Msa0318580:intron 10.0%
!!! GTAATTTTTTTTTAAAAGAA+CGG - chr2_4:17615279-17615298 Msa0318580:CDS 10.0%
!! AAACTACTAAAATAAATTAT+AGG - chr2_4:17615799-17615818 Msa0318580:CDS 10.0%
!! AAATACAAAAATAAAAAGAA+AGG - chr2_4:17616121-17616140 Msa0318580:CDS 10.0%
!!! AAGGTTTTTATTTTATTTTA+AGG + chr2_4:17616485-17616504 None:intergenic 10.0%
!!! GGTTTTTTTTATTTTTTTTA+AGG + chr2_4:17616649-17616668 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGAAGTA+AGG + chr2_4:17616852-17616871 None:intergenic 10.0%
!! TTCTTATCAAATAAAAAATT+TGG - chr2_4:17617297-17617316 Msa0318580:intron 10.0%
!!! TATAGTAAACTTTTATTTAA+TGG - chr2_4:17617325-17617344 Msa0318580:intron 10.0%
!!! TTTTTTAAAATTATTTTTGC+TGG - chr2_4:17617606-17617625 Msa0318580:intron 10.0%
!! TTAATTATATATAAGCAAAA+TGG - chr2_4:17617871-17617890 Msa0318580:intron 10.0%
!!! TTTTCAATTAAAATAAGTTA+AGG - chr2_4:17621258-17621277 Msa0318580:intron 10.0%
!! TTAGAAATAACAAATTTGAT+AGG - chr2_4:17614194-17614213 Msa0318580:intron 15.0%
!! TAAAGTGAATATAGAATATA+TGG - chr2_4:17614277-17614296 Msa0318580:intron 15.0%
!!! AAATAGTTTTTTTCAAAACT+CGG + chr2_4:17614388-17614407 None:intergenic 15.0%
!! TATAATCAAAATTTAAGAAG+GGG - chr2_4:17614474-17614493 Msa0318580:intron 15.0%
!!! TAAAAACATTCTTTTAAAGA+GGG + chr2_4:17614737-17614756 None:intergenic 15.0%
!!! TTAAAAACATTCTTTTAAAG+AGG + chr2_4:17614738-17614757 None:intergenic 15.0%
!!! TCTTTAAAAGAATGTTTTTA+AGG - chr2_4:17614737-17614756 Msa0318580:intron 15.0%
!!! CTTTAAAAGAATGTTTTTAA+GGG - chr2_4:17614738-17614757 Msa0318580:intron 15.0%
!! TTTATAGATAAGTTATGTTA+TGG - chr2_4:17614805-17614824 Msa0318580:intron 15.0%
!! TTATAGATAAGTTATGTTAT+GGG - chr2_4:17614806-17614825 Msa0318580:intron 15.0%
!! TTAAAATTTACTGCAAATAA+AGG + chr2_4:17614991-17615010 None:intergenic 15.0%
!!! TACATTTTTAATCCATAAAT+TGG + chr2_4:17616096-17616115 None:intergenic 15.0%
!! TGATAAAAACAATTAGAATT+TGG - chr2_4:17617204-17617223 Msa0318580:CDS 15.0%
!!! TTTTATTTTAAATAGCGTAA+TGG + chr2_4:17617520-17617539 None:intergenic 15.0%
!! CAACTTTCTTAAATTATTAT+CGG + chr2_4:17618715-17618734 None:intergenic 15.0%
!!! TTTGATGTTTTGATATTTTT+AGG - chr2_4:17619598-17619617 Msa0318580:intron 15.0%
!! ATTAAACTATTTATTCAAGT+AGG - chr2_4:17620006-17620025 Msa0318580:intron 15.0%
!! TTAAACTATTTATTCAAGTA+GGG - chr2_4:17620007-17620026 Msa0318580:intron 15.0%
!!! TAACAATTTTCATTTATCAA+AGG - chr2_4:17620128-17620147 Msa0318580:intron 15.0%
!!! AACAATTTTCATTTATCAAA+GGG - chr2_4:17620129-17620148 Msa0318580:intron 15.0%
!!! TAGATTGTTTAAAGATATTT+TGG + chr2_4:17620783-17620802 None:intergenic 15.0%
!!! TTATCTTTTTTAACATAGAA+AGG - chr2_4:17620900-17620919 Msa0318580:intron 15.0%
!!! TATCTTTTTTAACATAGAAA+GGG - chr2_4:17620901-17620920 Msa0318580:intron 15.0%
!!! AACTATAAGTTATTTCAATA+TGG + chr2_4:17621229-17621248 None:intergenic 15.0%
!! CTCATATTAAAGATAATACT+AGG - chr2_4:17614127-17614146 Msa0318580:CDS 20.0%
!!! TTTCTATTGATTTCTAATAC+AGG + chr2_4:17614345-17614364 None:intergenic 20.0%
!! TAGAAATACAATTGAATAGT+TGG - chr2_4:17614359-17614378 Msa0318580:CDS 20.0%
!! ATAATCAAAATTTAAGAAGG+GGG - chr2_4:17614475-17614494 Msa0318580:intron 20.0%
!! AAAAAGAAAAACATAACAGT+AGG - chr2_4:17614563-17614582 Msa0318580:intron 20.0%
!!! AAAAACATTCTTTTAAAGAG+GGG + chr2_4:17614736-17614755 None:intergenic 20.0%
!!! TGTAGAGATTGTAATTTTTT+TGG - chr2_4:17614895-17614914 Msa0318580:intron 20.0%
!!! GTAGAGATTGTAATTTTTTT+GGG - chr2_4:17614896-17614915 Msa0318580:intron 20.0%
!!! TTGTTGAATGTTTTTTCTTA+AGG - chr2_4:17614954-17614973 Msa0318580:CDS 20.0%
!! ACACTATTATGTATATATCT+CGG - chr2_4:17615109-17615128 Msa0318580:CDS 20.0%
!! AAAAATCATTCAAATCAACA+CGG - chr2_4:17615246-17615265 Msa0318580:CDS 20.0%
!!! TAAATTAGTGTTTTGTTCAA+TGG + chr2_4:17615429-17615448 None:intergenic 20.0%
!! AATGATGCACAAAATATTAT+TGG - chr2_4:17615478-17615497 Msa0318580:intron 20.0%
!! TATTTGTAAATTGTAATTGC+CGG + chr2_4:17615535-17615554 None:intergenic 20.0%
!!! TTTTAAAAGCAGTCTTTTTT+GGG + chr2_4:17615698-17615717 None:intergenic 20.0%
!!! ATTTTCAATAATAAGACATG+AGG - chr2_4:17615720-17615739 Msa0318580:CDS 20.0%
!!! TTTTCAATAATAAGACATGA+GGG - chr2_4:17615721-17615740 Msa0318580:CDS 20.0%
!! ACAAAAATAAAAAGAAAGGA+AGG - chr2_4:17616125-17616144 Msa0318580:CDS 20.0%
!! CAAAAATAAAAAGAAAGGAA+GGG - chr2_4:17616126-17616145 Msa0318580:CDS 20.0%
!!! AAGATTGGAAACTTTAAAAT+TGG + chr2_4:17616270-17616289 None:intergenic 20.0%
!! TTTAGTGTTCTTAAAATGTT+AGG - chr2_4:17616325-17616344 Msa0318580:intron 20.0%
!!! ATTTTGTATGTTCACATAAA+AGG + chr2_4:17616504-17616523 None:intergenic 20.0%
!!! ATTTTGTATGTTCACATAAA+AGG + chr2_4:17616504-17616523 None:intergenic 20.0%
!! TATTTATGTGAGATATTTCT+TGG - chr2_4:17616991-17617010 Msa0318580:intron 20.0%
!! ATGAACTTATAATGTTAATG+TGG - chr2_4:17617088-17617107 Msa0318580:intron 20.0%
!! TGAACTTATAATGTTAATGT+GGG - chr2_4:17617089-17617108 Msa0318580:intron 20.0%
!! TTTATTTGATAAGAATAACC+TGG + chr2_4:17617292-17617311 None:intergenic 20.0%
!!! AAAAAGGCTTTCTTTTTATT+TGG + chr2_4:17617376-17617395 None:intergenic 20.0%
!! TTAAATCCTAATCTATGATA+TGG - chr2_4:17617834-17617853 Msa0318580:intron 20.0%
!!! AAATCATTTTGTTCTTTTTG+AGG + chr2_4:17618085-17618104 None:intergenic 20.0%
!!! TGATTTGAAACATAATCTAT+AGG - chr2_4:17618099-17618118 Msa0318580:intron 20.0%
!! AATGAAATAGATTATGTGAA+AGG + chr2_4:17618131-17618150 None:intergenic 20.0%
!!! TATGGATAGTTTTTTTACTT+TGG + chr2_4:17618389-17618408 None:intergenic 20.0%
!!! AAGCTTATAAAAGGATTTTA+TGG + chr2_4:17618407-17618426 None:intergenic 20.0%
!! ATTTGTTTCAAGCTTATAAA+AGG + chr2_4:17618416-17618435 None:intergenic 20.0%
!! TAGTGTTAAAATATTACTCT+AGG - chr2_4:17618858-17618877 Msa0318580:intron 20.0%
!! AGTGTTAAAATATTACTCTA+GGG - chr2_4:17618859-17618878 Msa0318580:intron 20.0%
!! GAACAAATGAAAAAAAGAAA+TGG + chr2_4:17619191-17619210 None:intergenic 20.0%
!!! TTTTTCATTTGTTCTATAAC+AGG - chr2_4:17619197-17619216 Msa0318580:intron 20.0%
!!! CTATAAATTGTTTTCAGAAA+GGG + chr2_4:17619451-17619470 None:intergenic 20.0%
!!! AAGTAGGGTTTAATTTTAAA+TGG - chr2_4:17620022-17620041 Msa0318580:intron 20.0%
!! AAGATTAATTAGTTAATGTG+AGG - chr2_4:17620829-17620848 Msa0318580:intron 20.0%
!!! GTATTGTTGAAGATTTTTTA+TGG + chr2_4:17621143-17621162 None:intergenic 20.0%
!!! AACAAACATGAGTTTTTTTT+TGG + chr2_4:17621197-17621216 None:intergenic 20.0%
!! TGAAGGAAGAAAAAAAATAT+AGG + chr2_4:17621290-17621309 None:intergenic 20.0%
!!! TATATTTTTTTTCTTCCTTC+AGG - chr2_4:17621289-17621308 Msa0318580:intron 20.0%
!! TGAAGATCAAATTAACATAT+TGG + chr2_4:17621640-17621659 None:intergenic 20.0%
! GTGTCTTTGCTTAATTATTA+TGG - chr2_4:17613852-17613871 Msa0318580:three_prime_UTR 25.0%
! TTAATATGAGACTCTTTCAA+TGG + chr2_4:17614117-17614136 None:intergenic 25.0%
! AAGGTTATCTTGAATTGAAA+TGG - chr2_4:17614422-17614441 Msa0318580:CDS 25.0%
! TATCTTGAATTGAAATGGTT+TGG - chr2_4:17614427-17614446 Msa0318580:CDS 25.0%
! TAATCAAAATTTAAGAAGGG+GGG - chr2_4:17614476-17614495 Msa0318580:intron 25.0%
!! AATCTTATTTATGCTTGAGA+AGG + chr2_4:17614514-17614533 None:intergenic 25.0%
! TTCTTAAACTCAAGTTATGT+CGG + chr2_4:17614837-17614856 None:intergenic 25.0%
!!! TTCAAGTTACATATTTTCAG+TGG + chr2_4:17615055-17615074 None:intergenic 25.0%
! AAAATTACCATCGAACAAAA+TGG - chr2_4:17615363-17615382 Msa0318580:intron 25.0%
!!! CTTTTAAAAGCAGTCTTTTT+TGG + chr2_4:17615699-17615718 None:intergenic 25.0%
!!! CAAAAAAGACTGCTTTTAAA+AGG - chr2_4:17615697-17615716 Msa0318580:intron 25.0%
!!! TTTTCACAACTATTTGTTGA+TGG + chr2_4:17615773-17615792 None:intergenic 25.0%
! ATCAACAAATAGTTGTGAAA+AGG - chr2_4:17615772-17615791 Msa0318580:CDS 25.0%
! TTGAAAGTTCAACCAATTTA+TGG - chr2_4:17616081-17616100 Msa0318580:CDS 25.0%
!! TGTGTTTTTCTATTTTGCTA+AGG + chr2_4:17616170-17616189 None:intergenic 25.0%
! ATAAATTCCACTCATAAGAT+TGG + chr2_4:17616285-17616304 None:intergenic 25.0%
! CTTATGAGTGGAATTTATTT+AGG - chr2_4:17616287-17616306 Msa0318580:intron 25.0%
! AGAAGAACTAATAAGTTAGT+TGG - chr2_4:17617059-17617078 Msa0318580:intron 25.0%
! GAACTTATAATGTTAATGTG+GGG - chr2_4:17617090-17617109 Msa0318580:intron 25.0%
! TGCATATTATGATAAGACAA+TGG - chr2_4:17617227-17617246 Msa0318580:CDS 25.0%
! ATCATATGAGTTGTACTTAA+GGG + chr2_4:17617401-17617420 None:intergenic 25.0%
! TATCATATGAGTTGTACTTA+AGG + chr2_4:17617402-17617421 None:intergenic 25.0%
! ACACTAAATGTTGAATGAAA+AGG + chr2_4:17617485-17617504 None:intergenic 25.0%
! TTATTAGCTATTGCATTTGT+TGG - chr2_4:17617983-17618002 Msa0318580:intron 25.0%
! TGAGGTAAAAATACAAGTAA+GGG + chr2_4:17618067-17618086 None:intergenic 25.0%
! TTGAGGTAAAAATACAAGTA+AGG + chr2_4:17618068-17618087 None:intergenic 25.0%
!! AAAATGGAACATCATTTTGT+TGG + chr2_4:17618278-17618297 None:intergenic 25.0%
!!! AAAATGATGTTCCATTTTTG+AGG - chr2_4:17618280-17618299 Msa0318580:intron 25.0%
! TGTTTGTAAAATCTGAAGAA+GGG + chr2_4:17618326-17618345 None:intergenic 25.0%
! TTGTTTGTAAAATCTGAAGA+AGG + chr2_4:17618327-17618346 None:intergenic 25.0%
!! TCTAGAATTTAACTACTCAT+GGG - chr2_4:17618506-17618525 Msa0318580:intron 25.0%
! AACCAATAAGTAACATAAAC+CGG + chr2_4:17619047-17619066 None:intergenic 25.0%
!! GCTATAAATTGTTTTCAGAA+AGG + chr2_4:17619452-17619471 None:intergenic 25.0%
!!! ATCAAATTAGAATTTGCTGA+AGG + chr2_4:17619584-17619603 None:intergenic 25.0%
! TTAGTCAATAAATTTCCTCT+AGG + chr2_4:17619776-17619795 None:intergenic 25.0%
!! TAGAGGAAATTTATTGACTA+AGG - chr2_4:17619775-17619794 Msa0318580:intron 25.0%
!! AGAGGAAATTTATTGACTAA+GGG - chr2_4:17619776-17619795 Msa0318580:intron 25.0%
!! TTTGACATTATCTTGTCTTT+TGG - chr2_4:17619955-17619974 Msa0318580:intron 25.0%
! ACAATGTTTAATCCTTCAAA+AGG - chr2_4:17620601-17620620 Msa0318580:intron 25.0%
! CAATGTTTAATCCTTCAAAA+GGG - chr2_4:17620602-17620621 Msa0318580:intron 25.0%
! TATGTGTATATTCTAATGCA+AGG + chr2_4:17620697-17620716 None:intergenic 25.0%
! AATGGTTGGAATCAATTAAT+GGG + chr2_4:17620726-17620745 None:intergenic 25.0%
!!! GTTTAAAGATATTTTGGTGA+AGG + chr2_4:17620777-17620796 None:intergenic 25.0%
!! TGAACATGTTATTTGTTTGT+AGG - chr2_4:17620961-17620980 Msa0318580:intron 25.0%
! GTCTGAAAAATAATTTAAGC+AGG - chr2_4:17621164-17621183 Msa0318580:intron 25.0%
! TACCAAAGATATTCATTGAA+TGG - chr2_4:17621319-17621338 Msa0318580:intron 25.0%
!!! GAGGAAAACTAGTATTTTTT+TGG - chr2_4:17621510-17621529 Msa0318580:CDS 25.0%
! ATTTATCAACCGAACAAATT+GGG + chr2_4:17621589-17621608 None:intergenic 25.0%
! AATTTATCAACCGAACAAAT+TGG + chr2_4:17621590-17621609 None:intergenic 25.0%
AAATTATAATCAAACCCGTG+CGG + chr2_4:17614161-17614180 None:intergenic 30.0%
ATGTATAACACCTGCTTTAA+GGG + chr2_4:17614652-17614671 None:intergenic 30.0%
! TTTTACATAGGTTGTGTCTA+AGG + chr2_4:17614707-17614726 None:intergenic 30.0%
TTAGACACAACCTATGTAAA+AGG - chr2_4:17614706-17614725 Msa0318580:intron 30.0%
TATTAACTACGATCGCTATA+TGG + chr2_4:17614925-17614944 None:intergenic 30.0%
! AGTCATCGTGAGAATTTTAT+TGG + chr2_4:17615394-17615413 None:intergenic 30.0%
TAAAAAGAAAGGAAGGGAAA+AGG - chr2_4:17616132-17616151 Msa0318580:CDS 30.0%
! TTTTCTATTTTGCTAAGGTG+AGG + chr2_4:17616165-17616184 None:intergenic 30.0%
TAGAAAAACACAAACGATCA+TGG - chr2_4:17616178-17616197 Msa0318580:CDS 30.0%
ATCCTCCATATATAACAACA+TGG - chr2_4:17616216-17616235 Msa0318580:CDS 30.0%
TCCTCCATATATAACAACAT+GGG - chr2_4:17616217-17616236 Msa0318580:CDS 30.0%
TTTCCCCATGTTGTTATATA+TGG + chr2_4:17616224-17616243 None:intergenic 30.0%
AAAGTTTCCAATCTTATGAG+TGG - chr2_4:17616275-17616294 Msa0318580:intron 30.0%
!! TGTAGACCAAAGAGTTTTAA+CGG + chr2_4:17616576-17616595 None:intergenic 30.0%
! ATTAGAGCGTTAAAACTCTT+TGG - chr2_4:17616718-17616737 Msa0318580:intron 30.0%
ACTTGTTTCATTCTAATGCT+TGG + chr2_4:17616919-17616938 None:intergenic 30.0%
AGATGAATTTATACACCGTT+TGG - chr2_4:17617028-17617047 Msa0318580:intron 30.0%
!!! TTCTTCTGCTTTTTACCAAA+CGG + chr2_4:17617046-17617065 None:intergenic 30.0%
AATAATGTAGTAGCACATGT+GGG + chr2_4:17617143-17617162 None:intergenic 30.0%
TAATAATGTAGTAGCACATG+TGG + chr2_4:17617144-17617163 None:intergenic 30.0%
TTTGTTGCAGATTTATTGCT+TGG + chr2_4:17617178-17617197 None:intergenic 30.0%
TTCTAATGTAGTCACACTAA+TGG - chr2_4:17617258-17617277 Msa0318580:CDS 30.0%
GTTGTACTTAAGGGATAAAA+AGG + chr2_4:17617392-17617411 None:intergenic 30.0%
TTCACTAACATGTGACTTAT+TGG - chr2_4:17617428-17617447 Msa0318580:CDS 30.0%
TCACTAACATGTGACTTATT+GGG - chr2_4:17617429-17617448 Msa0318580:CDS 30.0%
! CCAGTTGAATTTTCTAACTT+CGG - chr2_4:17617725-17617744 Msa0318580:intron 30.0%
GACATTCCATATCATAGATT+AGG + chr2_4:17617843-17617862 None:intergenic 30.0%
! ACAGTGATTTGTATCTAGAA+TGG - chr2_4:17617960-17617979 Msa0318580:intron 30.0%
GTTTGTAAAATCTGAAGAAG+GGG + chr2_4:17618325-17618344 None:intergenic 30.0%
! CTTCAGATTTTACAAACAAG+TGG - chr2_4:17618328-17618347 Msa0318580:intron 30.0%
! GATTTTACAAACAAGTGGAA+TGG - chr2_4:17618333-17618352 Msa0318580:intron 30.0%
CATGAGTAGTTAAATTCTAG+AGG + chr2_4:17618507-17618526 None:intergenic 30.0%
!! CTCTAGAATTTAACTACTCA+TGG - chr2_4:17618505-17618524 Msa0318580:intron 30.0%
TTGACTACCTCAAAAAAACA+TGG - chr2_4:17618580-17618599 Msa0318580:intron 30.0%
!!! CTGATATCCATGTTTTTTTG+AGG + chr2_4:17618590-17618609 None:intergenic 30.0%
AATGAAACCATATGTCATGT+CGG - chr2_4:17618743-17618762 Msa0318580:intron 30.0%
! ATCCGGTTTATGTTACTTAT+TGG - chr2_4:17619042-17619061 Msa0318580:intron 30.0%
TACCATTATATCGTAACATG+AGG - chr2_4:17619076-17619095 Msa0318580:intron 30.0%
AACCTCATGTTACGATATAA+TGG + chr2_4:17619081-17619100 None:intergenic 30.0%
AAACCACCAATATGACATAA+TGG + chr2_4:17619240-17619259 None:intergenic 30.0%
! GCTAATTTTGCATCAAACTT+CGG + chr2_4:17619312-17619331 None:intergenic 30.0%
TTTGATGCAAAATTAGCTGT+TGG - chr2_4:17619315-17619334 Msa0318580:intron 30.0%
TTGATGCAAAATTAGCTGTT+GGG - chr2_4:17619316-17619335 Msa0318580:intron 30.0%
CCTAACAATAGAAATAAGAC+TGG + chr2_4:17619394-17619413 None:intergenic 30.0%
!! CCAGTCTTATTTCTATTGTT+AGG - chr2_4:17619391-17619410 Msa0318580:intron 30.0%
!! GTTTTGTACCTATTTGAAAC+TGG + chr2_4:17619423-17619442 None:intergenic 30.0%
ACTAGCTGTTTATCCAAAAA+GGG - chr2_4:17619558-17619577 Msa0318580:intron 30.0%
ACTGTCAAGAAAATACTCAA+TGG - chr2_4:17619648-17619667 Msa0318580:intron 30.0%
!! CTGAAATAAGCTTAGCTTTA+TGG + chr2_4:17619722-17619741 None:intergenic 30.0%
! TGTCATAAGTTGTTTCCATA+AGG + chr2_4:17619860-17619879 None:intergenic 30.0%
! TACGAGTTGAAAACAGTTTA+TGG + chr2_4:17619886-17619905 None:intergenic 30.0%
ACTCGTATCATAAGATCTAA+AGG - chr2_4:17619899-17619918 Msa0318580:intron 30.0%
TTAATCAAGCGCTTATGTAT+AGG + chr2_4:17619991-17620010 None:intergenic 30.0%
TTACATGTAGCAAGTTCATT+TGG - chr2_4:17620093-17620112 Msa0318580:intron 30.0%
TCTTCACCATATGTTTGAAA+AGG + chr2_4:17620224-17620243 None:intergenic 30.0%
ACATTTAATGCTCAGGTATT+GGG - chr2_4:17620361-17620380 Msa0318580:intron 30.0%
ATAAAGTCGAGTAAAACACT+TGG - chr2_4:17620539-17620558 Msa0318580:intron 30.0%
CAATGGTTGGAATCAATTAA+TGG + chr2_4:17620727-17620746 None:intergenic 30.0%
!!! TAAAGATATTTTGGTGAAGG+TGG + chr2_4:17620774-17620793 None:intergenic 30.0%
ATTTAGTCGAAATGTGGATT+CGG + chr2_4:17620858-17620877 None:intergenic 30.0%
GAACATATTTAGTCGAAATG+TGG + chr2_4:17620864-17620883 None:intergenic 30.0%
CATTTCGACTAAATATGTTC+AGG - chr2_4:17620864-17620883 Msa0318580:intron 30.0%
! ATTGCAAGTGTTGTTATTGT+GGG - chr2_4:17621013-17621032 Msa0318580:intron 30.0%
CTCCATTCAATGAATATCTT+TGG + chr2_4:17621324-17621343 None:intergenic 30.0%
TAGAGAACTACACAAATGTA+TGG - chr2_4:17621470-17621489 Msa0318580:CDS 30.0%
GGAATTATACTTTCAGATAG+AGG - chr2_4:17621491-17621510 Msa0318580:CDS 30.0%
!! TATTTCTAAAGTGACTAGAC+TGG - chr2_4:17621539-17621558 Msa0318580:CDS 30.0%
TTTATCAACCGAACAAATTG+GGG + chr2_4:17621588-17621607 None:intergenic 30.0%
AGAAAGTTGTGCTATCACTT+TGG - chr2_4:17613828-17613847 Msa0318580:three_prime_UTR 35.0%
TGAGTCGATTGTTAACTTTC+CGG - chr2_4:17613893-17613912 Msa0318580:intron 35.0%
TACTAGGTATATAAACCGCA+CGG - chr2_4:17614143-17614162 Msa0318580:intron 35.0%
GATGTATAACACCTGCTTTA+AGG + chr2_4:17614653-17614672 None:intergenic 35.0%
!!! ATATTTTCAGTGGCTTGCTT+AGG + chr2_4:17615045-17615064 None:intergenic 35.0%
! GGTATTTCCATTTTGTTCGA+TGG + chr2_4:17615373-17615392 None:intergenic 35.0%
! TATTTTGTGCATCATTCCTC+AGG + chr2_4:17615474-17615493 None:intergenic 35.0%
GTAAAATCATGAGAGCAATC+CGG - chr2_4:17615513-17615532 Msa0318580:intron 35.0%
GAGAGACATGTGATTACTAA+TGG + chr2_4:17615919-17615938 None:intergenic 35.0%
TGTCTCTCTTTCTTGTGTTA+TGG - chr2_4:17615931-17615950 Msa0318580:intron 35.0%
CCTCCATATATAACAACATG+GGG - chr2_4:17616218-17616237 Msa0318580:CDS 35.0%
GAGTAACCGTTAAAACTCTT+TGG - chr2_4:17616567-17616586 Msa0318580:intron 35.0%
TAGAAACCAAGCTTCTTTAG+AGG - chr2_4:17616876-17616895 Msa0318580:intron 35.0%
TAGTCACACTAATGGAAAGT+AGG - chr2_4:17617266-17617285 Msa0318580:intron 35.0%
!! AATTCAACTGGTTTGACTTG+AGG + chr2_4:17617716-17617735 None:intergenic 35.0%
CCGAAGTTAGAAAATTCAAC+TGG + chr2_4:17617728-17617747 None:intergenic 35.0%
CAATTCTCATCTCAATAGGT+TGG + chr2_4:17617784-17617803 None:intergenic 35.0%
CAACCTATTGAGATGAGAAT+TGG - chr2_4:17617782-17617801 Msa0318580:intron 35.0%
CTACCAATTCTCATCTCAAT+AGG + chr2_4:17617788-17617807 None:intergenic 35.0%
! TTAGCTATTGCATTTGTTGG+AGG - chr2_4:17617986-17618005 Msa0318580:intron 35.0%
TGCTCCTCTAAATTATCGTT+GGG - chr2_4:17618015-17618034 Msa0318580:intron 35.0%
CTTACCCAACGATAATTTAG+AGG + chr2_4:17618022-17618041 None:intergenic 35.0%
!!! TCTCCTAAAGAGTTTTGAAG+AGG - chr2_4:17618176-17618195 Msa0318580:intron 35.0%
TTGCCTCTTCAAAACTCTTT+AGG + chr2_4:17618182-17618201 None:intergenic 35.0%
TCATCAATCACTAACATCAC+TGG + chr2_4:17618228-17618247 None:intergenic 35.0%
!! ATGATGTTCCATTTTTGAGG+TGG - chr2_4:17618283-17618302 Msa0318580:intron 35.0%
AAAACATGCCACCTCAAAAA+TGG + chr2_4:17618294-17618313 None:intergenic 35.0%
TTACAAACAAGTGGAATGGT+AGG - chr2_4:17618337-17618356 Msa0318580:intron 35.0%
TGACACGTCGATAATATGAA+TGG - chr2_4:17618625-17618644 Msa0318580:intron 35.0%
ACTGTATGATCAAAGCTTCA+TGG + chr2_4:17618962-17618981 None:intergenic 35.0%
ATATCCAACTATGGCAATCT+TGG + chr2_4:17618991-17619010 None:intergenic 35.0%
ATCCTCACTATATCCAACTA+TGG + chr2_4:17619000-17619019 None:intergenic 35.0%
AACATAAACCGGATGTAACA+GGG + chr2_4:17619036-17619055 None:intergenic 35.0%
TAACATAAACCGGATGTAAC+AGG + chr2_4:17619037-17619056 None:intergenic 35.0%
GGAGAACTCAGTCATTATTT+GGG + chr2_4:17619170-17619189 None:intergenic 35.0%
TGGAGAACTCAGTCATTATT+TGG + chr2_4:17619171-17619190 None:intergenic 35.0%
ACTGCTCCATTATGTCATAT+TGG - chr2_4:17619231-17619250 Msa0318580:intron 35.0%
TGATGCAAAATTAGCTGTTG+GGG - chr2_4:17619317-17619336 Msa0318580:intron 35.0%
! ATAAGACTGGTCATTATTGC+AGG + chr2_4:17619381-17619400 None:intergenic 35.0%
GGTATGTTCCAGTTTCAAAT+AGG - chr2_4:17619412-17619431 Msa0318580:intron 35.0%
CACTAGCTGTTTATCCAAAA+AGG - chr2_4:17619557-17619576 Msa0318580:intron 35.0%
GTCAAGAAAATACTCAATGG+AGG - chr2_4:17619651-17619670 Msa0318580:intron 35.0%
AAGAAAATACTCAATGGAGG+TGG - chr2_4:17619654-17619673 Msa0318580:intron 35.0%
GCTAAGCTTATTTCAGCTTA+TGG - chr2_4:17619726-17619745 Msa0318580:intron 35.0%
AGCTTATTTCAGCTTATGGT+AGG - chr2_4:17619730-17619749 Msa0318580:intron 35.0%
AATTTCCTCTAGGCAACATT+GGG + chr2_4:17619766-17619785 None:intergenic 35.0%
AAATTTCCTCTAGGCAACAT+TGG + chr2_4:17619767-17619786 None:intergenic 35.0%
AAACTGTTTGAGAGACCTTA+TGG - chr2_4:17619842-17619861 Msa0318580:intron 35.0%
GCATTGGATCATATAGTGTT+AGG + chr2_4:17620184-17620203 None:intergenic 35.0%
TGTTTGAAAAGGATGGCTAA+TGG + chr2_4:17620213-17620232 None:intergenic 35.0%
! AGCCATCCTTTTCAAACATA+TGG - chr2_4:17620215-17620234 Msa0318580:intron 35.0%
CACCATATGTTTGAAAAGGA+TGG + chr2_4:17620220-17620239 None:intergenic 35.0%
!! TGGTTGGTGAATAAGATGTT+TGG + chr2_4:17620252-17620271 None:intergenic 35.0%
CATATCTTCAGTTCTACATG+AGG + chr2_4:17620302-17620321 None:intergenic 35.0%
GAACTGAAGATATGCAAAGA+TGG - chr2_4:17620308-17620327 Msa0318580:intron 35.0%
ATATGCAAAGATGGTAACAC+TGG - chr2_4:17620317-17620336 Msa0318580:intron 35.0%
TATGCAAAGATGGTAACACT+GGG - chr2_4:17620318-17620337 Msa0318580:intron 35.0%
!!! ACTGGGAGAATTTTAACTAG+AGG - chr2_4:17620335-17620354 Msa0318580:intron 35.0%
!!! CTGGGAGAATTTTAACTAGA+GGG - chr2_4:17620336-17620355 Msa0318580:intron 35.0%
CAATACCTGAGCATTAAATG+TGG + chr2_4:17620362-17620381 None:intergenic 35.0%
CACATTTAATGCTCAGGTAT+TGG - chr2_4:17620360-17620379 Msa0318580:intron 35.0%
! AATGAAGTCTGGTTTGATAC+CGG - chr2_4:17620416-17620435 Msa0318580:intron 35.0%
TCGACTTTATTACCTCTTCA+GGG + chr2_4:17620529-17620548 None:intergenic 35.0%
!!! ACTTGGAAGATTTTTAGTGC+AGG - chr2_4:17620556-17620575 Msa0318580:intron 35.0%
ATGTCACACTAGACATTTCT+AGG - chr2_4:17620662-17620681 Msa0318580:intron 35.0%
ATCGATCTCAAATCAATGGT+TGG + chr2_4:17620740-17620759 None:intergenic 35.0%
!! ACCATTGATTTGAGATCGAT+CGG - chr2_4:17620740-17620759 Msa0318580:intron 35.0%
!! CTACACCTTTGATTTGAGAT+TGG - chr2_4:17620800-17620819 Msa0318580:intron 35.0%
GTCATCCAATCTCAAATCAA+AGG + chr2_4:17620808-17620827 None:intergenic 35.0%
TTTAGTCGAAATGTGGATTC+GGG + chr2_4:17620857-17620876 None:intergenic 35.0%
!! CTAGTCTTGTTAACAGTTTC+AGG - chr2_4:17620932-17620951 Msa0318580:intron 35.0%
CAATTCTACTAGAACATCCA+GGG - chr2_4:17620990-17621009 Msa0318580:intron 35.0%
! GATTGCAAGTGTTGTTATTG+TGG - chr2_4:17621012-17621031 Msa0318580:intron 35.0%
ATTTCTGTGAAACGTGCATT+TGG + chr2_4:17621043-17621062 None:intergenic 35.0%
AAATGCACGTTTCACAGAAA+TGG - chr2_4:17621042-17621061 Msa0318580:intron 35.0%
GTATCCAACCAAGAGAAAAT+TGG - chr2_4:17621074-17621093 Msa0318580:intron 35.0%
! ATTGCCAATTTTCTCTTGGT+TGG + chr2_4:17621081-17621100 None:intergenic 35.0%
AACCAAGAGAAAATTGGCAA+TGG - chr2_4:17621080-17621099 Msa0318580:intron 35.0%
! AACCATTGCCAATTTTCTCT+TGG + chr2_4:17621085-17621104 None:intergenic 35.0%
CTTTGGTATCTTAAACCTGA+AGG + chr2_4:17621307-17621326 None:intergenic 35.0%
! ATTTTTCCTGTAGTAGTGAG+TGG + chr2_4:17621357-17621376 None:intergenic 35.0%
CTTTGCATAGTAATCTCTGA+TGG - chr2_4:17621421-17621440 Msa0318580:CDS 35.0%
ACTAGGTATATAAACCGCAC+GGG - chr2_4:17614144-17614163 Msa0318580:intron 40.0%
AAGAAACTCGAATTACTCCG+CGG - chr2_4:17614621-17614640 Msa0318580:intron 40.0%
!! ATAACACCTGCTTTAAGGGT+AGG + chr2_4:17614648-17614667 None:intergenic 40.0%
! GAGGGGAAAACCTTTTACAT+AGG + chr2_4:17614719-17614738 None:intergenic 40.0%
! GAAAAACAGTTTTCAGCCTG+AGG - chr2_4:17615455-17615474 Msa0318580:intron 40.0%
GGAGTTGCGGTATATTCTTT+GGG + chr2_4:17615677-17615696 None:intergenic 40.0%
! TCTATTTTGCTAAGGTGAGG+TGG + chr2_4:17616162-17616181 None:intergenic 40.0%
CCCCATGTTGTTATATATGG+AGG + chr2_4:17616221-17616240 None:intergenic 40.0%
AATGTTAATGTGGGGTCACT+AGG - chr2_4:17617098-17617117 Msa0318580:intron 40.0%
ACATGTGACTTATTGGGACA+CGG - chr2_4:17617435-17617454 Msa0318580:CDS 40.0%
CTGCTCCTCTAAATTATCGT+TGG - chr2_4:17618014-17618033 Msa0318580:intron 40.0%
AGTTAGCAATGAAAGCAGTG+AGG - chr2_4:17618202-17618221 Msa0318580:intron 40.0%
TTGATGAGAGCTGCTATTCA+TGG - chr2_4:17618241-17618260 Msa0318580:intron 40.0%
!! TTTGAGGTGGCATGTTTTGT+TGG - chr2_4:17618296-17618315 Msa0318580:intron 40.0%
GTCATAATCTGCTTCACTTC+AGG - chr2_4:17618543-17618562 Msa0318580:intron 40.0%
TCACCGACACTTCATATTGA+AGG + chr2_4:17618803-17618822 None:intergenic 40.0%
TTGTTGTGTGCTTGACTACT+AGG - chr2_4:17618903-17618922 Msa0318580:intron 40.0%
AACTATGGCAATCTTGGCTA+GGG + chr2_4:17618985-17619004 None:intergenic 40.0%
TGCCATAGTTGGATATAGTG+AGG - chr2_4:17618995-17619014 Msa0318580:intron 40.0%
GCTCCATTATGTCATATTGG+TGG - chr2_4:17619234-17619253 Msa0318580:intron 40.0%
!!! AATTTGCTGAAGGCCCTTTT+TGG + chr2_4:17619574-17619593 None:intergenic 40.0%
!! TTTTTAGGCGCAAAGAAACC+TGG - chr2_4:17619613-17619632 Msa0318580:intron 40.0%
! TGGCTAATGGCTTTTTGCAT+TGG + chr2_4:17620200-17620219 None:intergenic 40.0%
CATCTTATTCACCAACCACA+AGG - chr2_4:17620254-17620273 Msa0318580:intron 40.0%
! CTGATTTGATGTGTTTGCGA+GGG + chr2_4:17620393-17620412 None:intergenic 40.0%
! TCTGATTTGATGTGTTTGCG+AGG + chr2_4:17620394-17620413 None:intergenic 40.0%
TCGCAAACACATCAAATCAG+AGG - chr2_4:17620393-17620412 Msa0318580:intron 40.0%
CAAATCAGAGGAATGAAGTC+TGG - chr2_4:17620405-17620424 Msa0318580:intron 40.0%
! ATGAAGTCTGGTTTGATACC+GGG - chr2_4:17620417-17620436 Msa0318580:intron 40.0%
!! AATGGATCAACGGATTGTCA+TGG - chr2_4:17620443-17620462 Msa0318580:intron 40.0%
CTCGACTTTATTACCTCTTC+AGG + chr2_4:17620530-17620549 None:intergenic 40.0%
! CACTTGTGTATCCCTTTTGA+AGG + chr2_4:17620616-17620635 None:intergenic 40.0%
GCAATTCTACTAGAACATCC+AGG - chr2_4:17620989-17621008 Msa0318580:intron 40.0%
ATAACAACACTTGCAATCCC+TGG + chr2_4:17621010-17621029 None:intergenic 40.0%
! AGTTCTCTAGAAAGCAGGAT+GGG + chr2_4:17621459-17621478 None:intergenic 40.0%
! TAGTTCTCTAGAAAGCAGGA+TGG + chr2_4:17621460-17621479 None:intergenic 40.0%
! TGTGTAGTTCTCTAGAAAGC+AGG + chr2_4:17621464-17621483 None:intergenic 40.0%
!! TTCTAAAGTGACTAGACTGG+TGG - chr2_4:17621542-17621561 Msa0318580:CDS 40.0%
! TCTAAAGTGACTAGACTGGT+GGG - chr2_4:17621543-17621562 Msa0318580:CDS 40.0%
TAGACTGGTGGGATAAATCA+AGG - chr2_4:17621554-17621573 Msa0318580:CDS 40.0%
! AACTTTCCGGCGAGATTTTC+CGG - chr2_4:17613906-17613925 Msa0318580:three_prime_UTR 45.0%
! AGATTTTCCGGTGACCATTG+CGG - chr2_4:17613918-17613937 Msa0318580:three_prime_UTR 45.0%
TAGCCATCTCTGCTTACAAC+AGG - chr2_4:17614034-17614053 Msa0318580:CDS 45.0%
GTACCTGTTGTAAGCAGAGA+TGG + chr2_4:17614040-17614059 None:intergenic 45.0%
AGAAACTCGAATTACTCCGC+GGG - chr2_4:17614622-17614641 Msa0318580:intron 45.0%
GGGAGTTGCGGTATATTCTT+TGG + chr2_4:17615678-17615697 None:intergenic 45.0%
!!! GCAGTCTTTTTTGGGAGTTG+CGG + chr2_4:17615690-17615709 None:intergenic 45.0%
!! CTTCTTTAGAGGTGCCACAT+AGG - chr2_4:17616887-17616906 Msa0318580:intron 45.0%
ATGCTTGGATTGTGCCTATG+TGG + chr2_4:17616904-17616923 None:intergenic 45.0%
TTAATGTGGGGTCACTAGGA+TGG - chr2_4:17617102-17617121 Msa0318580:intron 45.0%
ACACTAATGGAAAGTAGGCC+AGG - chr2_4:17617271-17617290 Msa0318580:intron 45.0%
TGACTCCAGGAATGCTTAAG+AGG - chr2_4:17618469-17618488 Msa0318580:intron 45.0%
TGTTGCCTCTTAAGCATTCC+TGG + chr2_4:17618477-17618496 None:intergenic 45.0%
CAGATTATGACAGCTCCTTC+AGG + chr2_4:17618534-17618553 None:intergenic 45.0%
GCTTGACTACTAGGAACTAC+TGG - chr2_4:17618912-17618931 Msa0318580:intron 45.0%
AGGAACTACTGGAAAACCCA+AGG - chr2_4:17618923-17618942 Msa0318580:intron 45.0%
GGAACTACTGGAAAACCCAA+GGG - chr2_4:17618924-17618943 Msa0318580:intron 45.0%
CAACTATGGCAATCTTGGCT+AGG + chr2_4:17618986-17619005 None:intergenic 45.0%
CTAGCCAAGATTGCCATAGT+TGG - chr2_4:17618984-17619003 Msa0318580:intron 45.0%
ATGCCATTCCCTGTTACATC+CGG - chr2_4:17619025-17619044 Msa0318580:intron 45.0%
AAACCGGATGTAACAGGGAA+TGG + chr2_4:17619031-17619050 None:intergenic 45.0%
ACAACCTCCAACCATAAGCA+TGG + chr2_4:17619277-17619296 None:intergenic 45.0%
CTTTGATAAGCTCAAGCGAG+AGG + chr2_4:17619683-17619702 None:intergenic 45.0%
! TGAAGTCTGGTTTGATACCG+GGG - chr2_4:17620418-17620437 Msa0318580:intron 45.0%
CGGATTGTCATGGTAACTTG+TGG - chr2_4:17620453-17620472 Msa0318580:intron 45.0%
! ATGGTAACTTGTGGCTCCTT+GGG - chr2_4:17620462-17620481 Msa0318580:intron 45.0%
ACAAATGGTCGCATCAAGAG+TGG - chr2_4:17620488-17620507 Msa0318580:intron 45.0%
GGAGAACATTTACCCTGAAG+AGG - chr2_4:17620514-17620533 Msa0318580:intron 45.0%
GCCGATCGATCTCAAATCAA+TGG + chr2_4:17620744-17620763 None:intergenic 45.0%
CCTGTAGTAGTGAGTGGAAA+AGG + chr2_4:17621351-17621370 None:intergenic 45.0%
! CCTTTTCCACTCACTACTAC+AGG - chr2_4:17621348-17621367 Msa0318580:intron 45.0%
AAGAAGAGACCAAGTCCGAA+AGG - chr2_4:17621377-17621396 Msa0318580:intron 45.0%
! CCACAGAACCCCAATTTGTT+CGG - chr2_4:17621577-17621596 Msa0318580:exon 45.0%
!! CATATATATATATATATATA+TGG + chr2_4:17616039-17616058 None:intergenic 5.0%
!! TATATATATATATATATATG+TGG - chr2_4:17616041-17616060 Msa0318580:intron 5.0%
! GATTTTCCGGTGACCATTGC+GGG - chr2_4:17613919-17613938 Msa0318580:three_prime_UTR 50.0%
TTGTTTCCCGCAATGGTCAC+CGG + chr2_4:17613928-17613947 None:intergenic 50.0%
!! GAAGTGGTGTCACTAGCACA+TGG - chr2_4:17613976-17613995 Msa0318580:three_prime_UTR 50.0%
GAGATGGCTACAACATCACC+TGG + chr2_4:17614024-17614043 None:intergenic 50.0%
! GTGGCACCTCTAAAGAAGCT+TGG + chr2_4:17616885-17616904 None:intergenic 50.0%
!! TGTTCTTCAGTGCTGACTCC+AGG - chr2_4:17618456-17618475 Msa0318580:intron 50.0%
AACTACTCATGGGCACCTGA+AGG - chr2_4:17618516-17618535 Msa0318580:intron 50.0%
AACCATATGTCATGTCGGCG+TGG - chr2_4:17618748-17618767 Msa0318580:intron 50.0%
TGGCTTATTGCGACTCCCTT+GGG + chr2_4:17618942-17618961 None:intergenic 50.0%
ATGGCTTATTGCGACTCCCT+TGG + chr2_4:17618943-17618962 None:intergenic 50.0%
! TGGTGGTTTGTCATCTGCCA+TGG - chr2_4:17619251-17619270 Msa0318580:intron 50.0%
ATCTGCCATGGCCATGCTTA+TGG - chr2_4:17619263-17619282 Msa0318580:intron 50.0%
TCCAACCATAAGCATGGCCA+TGG + chr2_4:17619271-17619290 None:intergenic 50.0%
ATGGCCATGCTTATGGTTGG+AGG - chr2_4:17619270-17619289 Msa0318580:intron 50.0%
AGGCGCAAAGAAACCTGGAA+AGG - chr2_4:17619618-17619637 Msa0318580:intron 50.0%
GGCGCAAAGAAACCTGGAAA+GGG - chr2_4:17619619-17619638 Msa0318580:intron 50.0%
GCGCAAAGAAACCTGGAAAG+GGG - chr2_4:17619620-17619639 Msa0318580:intron 50.0%
CGCAAAGAAACCTGGAAAGG+GGG - chr2_4:17619621-17619640 Msa0318580:intron 50.0%
CTTGACCCAATGTTGCCTAG+AGG - chr2_4:17619758-17619777 Msa0318580:intron 50.0%
CAACACAGACACCTTGTGGT+TGG + chr2_4:17620268-17620287 None:intergenic 50.0%
! CAACCACAAGGTGTCTGTGT+TGG - chr2_4:17620266-17620285 Msa0318580:intron 50.0%
TTGCCAACACAGACACCTTG+TGG + chr2_4:17620272-17620291 None:intergenic 50.0%
! ACAAGGTGTCTGTGTTGGCA+AGG - chr2_4:17620271-17620290 Msa0318580:intron 50.0%
GAGGGCCACATTTAATGCTC+AGG - chr2_4:17620354-17620373 Msa0318580:intron 50.0%
TGGTTTGATACCGGGGACAA+TGG - chr2_4:17620425-17620444 Msa0318580:intron 50.0%
TACCGGGGACAATGGATCAA+CGG - chr2_4:17620433-17620452 Msa0318580:intron 50.0%
ATCCGTTGATCCATTGTCCC+CGG + chr2_4:17620438-17620457 None:intergenic 50.0%
! CATGGTAACTTGTGGCTCCT+TGG - chr2_4:17620461-17620480 Msa0318580:intron 50.0%
AATGGTCGCATCAAGAGTGG+TGG - chr2_4:17620491-17620510 Msa0318580:intron 50.0%
ATGGTCGCATCAAGAGTGGT+GGG - chr2_4:17620492-17620511 Msa0318580:intron 50.0%
AAGAGACCAAGTCCGAAAGG+AGG - chr2_4:17621380-17621399 Msa0318580:intron 50.0%
ACAGAACCTCCTTTCGGACT+TGG + chr2_4:17621389-17621408 None:intergenic 50.0%
GCTCAGACAGAACCTCCTTT+CGG + chr2_4:17621395-17621414 None:intergenic 50.0%
CCGAACAAATTGGGGTTCTG+TGG + chr2_4:17621580-17621599 None:intergenic 50.0%
TGGTCACCGGAAAATCTCGC+CGG + chr2_4:17613915-17613934 None:intergenic 55.0%
! CTTGCGGTTGTTTCCCGCAA+TGG + chr2_4:17613935-17613954 None:intergenic 55.0%
CGGGAAACAACCGCAAGACA+GGG - chr2_4:17613938-17613957 Msa0318580:three_prime_UTR 55.0%
CCAACTGTTGCCCTGTCTTG+CGG + chr2_4:17613951-17613970 None:intergenic 55.0%
CAAGACAGGGCAACAGTTGG+TGG - chr2_4:17613951-17613970 Msa0318580:three_prime_UTR 55.0%
!! GCAACAGTTGGTGGAGGAAG+TGG - chr2_4:17613960-17613979 Msa0318580:three_prime_UTR 55.0%
AGCACATGGTCTTCTCCAGC+TGG - chr2_4:17613990-17614009 Msa0318580:three_prime_UTR 55.0%
GCACATGGTCTTCTCCAGCT+GGG - chr2_4:17613991-17614010 Msa0318580:three_prime_UTR 55.0%
GCCATGGCCATGCTTATGGT+TGG - chr2_4:17619267-17619286 Msa0318580:intron 55.0%
GACAGTTTCTCCCCCTTTCC+AGG + chr2_4:17619634-17619653 None:intergenic 55.0%
TGGCTCCTTGGGCGTACAAA+TGG - chr2_4:17620473-17620492 Msa0318580:intron 55.0%
TGCGACCATTTGTACGCCCA+AGG + chr2_4:17620481-17620500 None:intergenic 55.0%
TGGTCGCATCAAGAGTGGTG+GGG - chr2_4:17620493-17620512 Msa0318580:intron 55.0%
GCGGGAAACAACCGCAAGAC+AGG - chr2_4:17613937-17613956 Msa0318580:three_prime_UTR 60.0%
CCGCAAGACAGGGCAACAGT+TGG - chr2_4:17613948-17613967 Msa0318580:three_prime_UTR 60.0%
!! GACAGGGCAACAGTTGGTGG+AGG - chr2_4:17613954-17613973 Msa0318580:three_prime_UTR 60.0%
!! CTGCTTTAAGGGTAGGCCCG+CGG + chr2_4:17614641-17614660 None:intergenic 60.0%
CGCCACGCCGACATGACATA+TGG + chr2_4:17618753-17618772 None:intergenic 60.0%
! CTCCAGCTGGGTGTCACACC+AGG - chr2_4:17614003-17614022 Msa0318580:three_prime_UTR 65.0%
CACCTGGTGTGACACCCAGC+TGG + chr2_4:17614008-17614027 None:intergenic 65.0%
CGCGGGCCTACCCTTAAAGC+AGG - chr2_4:17614639-17614658 Msa0318580:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 17613798 17621666 17613798 ID=Msa0318580;Name=Msa0318580
chr2_4 mRNA 17613798 17621666 17613798 ID=Msa0318580-mRNA-1;Parent=Msa0318580;Name=Msa0318580-mRNA-1;_AED=0.23;_eAED=0.23;_QI=73|1|1|1|0.9|0.81|11|204|554
chr2_4 exon 17613798 17613881 17613798 ID=Msa0318580-mRNA-1:exon:6569;Parent=Msa0318580-mRNA-1
chr2_4 exon 17613904 17614153 17613904 ID=Msa0318580-mRNA-1:exon:6568;Parent=Msa0318580-mRNA-1
chr2_4 exon 17614279 17614481 17614279 ID=Msa0318580-mRNA-1:exon:6567;Parent=Msa0318580-mRNA-1
chr2_4 exon 17614929 17615314 17614929 ID=Msa0318580-mRNA-1:exon:6566;Parent=Msa0318580-mRNA-1
chr2_4 exon 17615717 17615844 17615717 ID=Msa0318580-mRNA-1:exon:6565;Parent=Msa0318580-mRNA-1
chr2_4 exon 17616052 17616245 17616052 ID=Msa0318580-mRNA-1:exon:6564;Parent=Msa0318580-mRNA-1
chr2_4 exon 17616442 17616539 17616442 ID=Msa0318580-mRNA-1:exon:6563;Parent=Msa0318580-mRNA-1
chr2_4 exon 17616900 17616998 17616900 ID=Msa0318580-mRNA-1:exon:6562;Parent=Msa0318580-mRNA-1
chr2_4 exon 17617110 17617278 17617110 ID=Msa0318580-mRNA-1:exon:6561;Parent=Msa0318580-mRNA-1
chr2_4 exon 17617428 17617500 17617428 ID=Msa0318580-mRNA-1:exon:6560;Parent=Msa0318580-mRNA-1
chr2_4 exon 17621409 17621666 17621409 ID=Msa0318580-mRNA-1:exon:6559;Parent=Msa0318580-mRNA-1
chr2_4 five_prime_UTR 17621594 17621666 17621594 ID=Msa0318580-mRNA-1:five_prime_utr;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17621409 17621593 17621409 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17617428 17617500 17617428 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17617110 17617278 17617110 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17616900 17616998 17616900 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17616442 17616539 17616442 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17616052 17616245 17616052 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17615717 17615844 17615717 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17614929 17615314 17614929 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17614279 17614481 17614279 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 CDS 17614024 17614153 17614024 ID=Msa0318580-mRNA-1:cds;Parent=Msa0318580-mRNA-1
chr2_4 three_prime_UTR 17613904 17614023 17613904 ID=Msa0318580-mRNA-1:three_prime_utr;Parent=Msa0318580-mRNA-1
chr2_4 three_prime_UTR 17613798 17613881 17613798 ID=Msa0318580-mRNA-1:three_prime_utr;Parent=Msa0318580-mRNA-1
Gene Sequence

>Msa0318580

ATGGCTCATATTTGTCAATGTCTGAGTCGATTGTTAACTTTCCGGCGAGATTTTCCGGTGACCATTGCGGGAAACAACCGCAAGACAGGGCAACAGTTGGTGGAGGAAGTGGTGTCACTAGCACATGGTCTTCTCCAGCTGGGTGTCACACCAGGTGATGTTGTAGCCATCTCTGCTTACAACAGTGATTTGTATCTAGAATGGTTATTAGCTATTGCATTTGTTGGAGGAATTGCTGCTCCTCTAAATTATCGTTGGAGTTTTGAAGAGGCAAAGTTAGCAATGAAAGCAGTGAGGCCAGTGATGTTAGTGATTGATGAGAGCTGCTATTCATGGTACTTCAAATTCCAACAAAATGATGTTCCATTTTTGAGGTGGCATGTTTTGTTGGATTCCCCTTCTTCAGATTTTACAAACAAGTGGAATGTGCTGACTCCAGGAATGCTTAAGAGGCAACATATAAAGCCTCTAGAATTTAACTACTCATGGGCACCTGAAGGAGCTGTCATAATCTGCTTCACTTCAGGAACTACTGGAAAACCCAAGGGAGTCGCAATAAGCCATGAAGCTTTGATCATACAGTCCCTAGCCAAGATTGCCATAGTTGGATATAGTGAGGATGATGTTTATCTTCATACTGCTCCATTATGTCATATTGGTGGTTTGTCATCTGCCATGGCCATGCTTATGGTTGGAGGTTGTCATGTATTCATGCCGAAGTTTGATGCAAAATTAGCTGTTGGGGACATAGAGCAATATAATGTGACATCTCTTATAACAGTTCCTGCAATAATGACCAGTCTTATTTCTATTGTTAGGCGCAAAGAAACCTGGAAAGGGGGAGAAACTGTCAAGAAAATACTCAATGGAGGTGGAAGCCTCTCGCTTGAGCTTATCAAAGACGCTAGCATATTCTTCCATAAAGCTAAGCTTATTTCAGCTTATGGGATGACAGAAGCATGCTCTTCATTGACATTCCTAACACTATATGATCCAATGCAAAAAGCCATTAGCCATCCTTTTCAAACATATGGTGAAGAAGAATCCAAACATCTTATTCACCAACCACAAGGTGTCTGTGTTGGCAAGGCTGCACCTCATGTAGAACTGAAGATATGCAAAGATGGTAACACTGGGAGAATTTTAACTAGAGGGCCACATTTAATGCTCAGGTATTGGGATCAAACCCTCGCAAACACATCAAATCAGAGGAATGAAGTCTGGTTTGATACCGGGGACAATGGATCAACGGATTGTCATGGTAACTTGTGGCTCCTTGGGCGTACAAATGGTCGCATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAAGCAATTCTACTAGAACATCCAGGGATTGCAAGTGTTGTTATTGTGGGAATACCAAATGCACGTTTCACAGAAATGGTAGCAGCATGTATCCAACCAAGAGAAAATTGGCAATGGTTCGAGCATTCTAATTCAAATGAAGAGTGTAATTTATCCATAAAAAATCTTCAACAATACTGTCTGAAAAATAATTTAAGCAGGTTTAAGATACCAAAGATATTCATTGAATGGAGAAAGCCTTTTCCACTCACTACTACAGGAAAAATAAGAAGAGACCAAGTCCGAAAGGAGGTTCTGTCTGAGCTGCAATCTTTGCATAGTAATCTCTGA
Protein sequence

>Msa0318580

MAHICQCLSRLLTFRRDFPVTIAGNNRKTGQQLVEEVVSLAHGLLQLGVTPGDVVAISAYNSDLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVRPVMLVIDESCYSWYFKFQQNDVPFLRWHVLLDSPSSDFTNKWNVLTPGMLKRQHIKPLEFNYSWAPEGAVIICFTSGTTGKPKGVAISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKFDAKLAVGDIEQYNVTSLITVPAIMTSLISIVRRKETWKGGETVKKILNGGGSLSLELIKDASIFFHKAKLISAYGMTEACSSLTFLTLYDPMQKAISHPFQTYGEEESKHLIHQPQGVCVGKAAPHVELKICKDGNTGRILTRGPHLMLRYWDQTLANTSNQRNEVWFDTGDNGSTDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIASVVIVGIPNARFTEMVAACIQPRENWQWFEHSNSNEECNLSIKNLQQYCLKNNLSRFKIPKIFIEWRKPFPLTTTGKIRRDQVRKEVLSELQSLHSNL*