AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0243270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0243270 MtrunA17_Chr2g0296381 99.596 742 3 0 1 742 1 742 0.0 1527
Msa0243270 MtrunA17_Chr4g0067011 93.396 742 49 0 1 742 3 744 0.0 1443
Msa0243270 MtrunA17_Chr7g0268881 85.347 389 57 0 354 742 1 389 0.0 703
Msa0243270 MtrunA17_Chr7g0268891 72.189 338 92 1 3 340 2 337 0.0 521
Msa0243270 MtrunA17_Chr8g0361901 34.225 710 428 13 43 742 51 731 4.86e-131 405
Msa0243270 MtrunA17_Chr6g0453061 33.513 743 449 14 10 742 23 730 1.14e-126 394
Msa0243270 MtrunA17_Chr5g0416711 34.153 732 439 15 23 742 32 732 1.05e-121 381
Msa0243270 MtrunA17_Chr6g0453081 32.571 743 456 15 10 742 23 730 1.05e-120 379
Msa0243270 MtrunA17_Chr1g0166181 35.455 660 396 11 92 742 101 739 4.58e-120 377
Msa0243270 MtrunA17_Chr2g0285881 33.194 720 433 14 34 742 110 792 1.62e-118 374
Msa0243270 MtrunA17_Chr1g0166131 34.493 661 401 12 92 742 102 740 6.50e-115 363
Msa0243270 MtrunA17_Chr7g0231701 32.727 660 401 11 92 742 83 708 1.47e-106 341
Msa0243270 MtrunA17_Chr1g0166141 34.983 606 366 9 144 742 90 674 5.87e-104 333
Msa0243270 MtrunA17_Chr7g0231741 40.576 382 211 7 369 742 2 375 1.20e-80 262
Msa0243270 MtrunA17_Chr4g0067071 55.500 200 89 0 7 206 5 204 2.00e-71 232
Msa0243270 MtrunA17_Chr4g0067051 54.412 204 89 2 5 206 3 204 7.08e-68 222
Msa0243270 MtrunA17_Chr4g0067031 51.770 226 101 3 2 222 6 228 1.71e-64 219
Msa0243270 MtrunA17_Chr5g0416691 36.562 413 238 10 341 742 2 401 2.85e-64 219
Msa0243270 MtrunA17_Chr7g0231791 36.010 411 243 9 341 742 2 401 3.35e-63 216
Msa0243270 MtrunA17_Chr4g0067381 52.683 205 94 1 2 206 4 205 4.87e-62 206
Msa0243270 MtrunA17_Chr5g0416831 34.557 327 167 7 423 742 3 289 4.78e-49 174
Msa0243270 MtrunA17_Chr5g0416731 26.498 434 273 11 44 443 25 446 2.18e-39 151
Msa0243270 MtrunA17_Chr7g0231721 26.765 340 227 8 48 385 29 348 2.72e-35 137
Msa0243270 MtrunA17_Chr7g0231581 26.710 307 206 6 76 380 22 311 4.09e-32 127
Msa0243270 MtrunA17_Chr5g0416901 26.710 307 206 5 76 380 46 335 6.80e-32 127
Msa0243270 MtrunA17_Chr7g0231751 27.891 294 186 7 32 305 21 308 1.60e-28 116
Msa0243270 MtrunA17_Chr7g0231571 29.464 224 152 4 76 297 22 241 5.79e-27 110
Msa0243270 MtrunA17_Chr4g0074661 58.427 89 36 1 1 89 1 88 7.82e-27 105
Msa0243270 MtrunA17_Chr5g0416911 29.018 224 153 4 76 297 30 249 8.66e-27 110
Msa0243270 MtrunA17_Chr5g0416681 26.027 219 156 2 89 304 36 251 2.61e-19 88.2
Msa0243270 MtrunA17_Chr7g0231801 26.027 219 156 2 89 304 36 251 2.98e-19 88.2
Msa0243270 MtrunA17_Chr4g0068101 51.087 92 45 0 75 166 14 105 2.92e-17 78.2
Msa0243270 MtrunA17_Chr1g0166151 24.719 178 125 5 92 267 14 184 1.78e-12 66.6
Msa0243270 MtrunA17_Chr2g0285291 76.923 39 9 0 618 656 30 68 3.27e-12 63.2
Msa0243270 MtrunA17_Chr4g0042591 28.962 183 118 4 423 596 553 732 4.92e-12 69.7
Msa0243270 MtrunA17_Chr7g0222201 26.768 198 135 3 423 611 563 759 8.20e-12 68.9
Msa0243270 MtrunA17_Chr4g0042651 27.225 191 129 3 423 604 553 742 1.41e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0243270 AT4G02570.4 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0243270 AT4G02570.2 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0243270 AT4G02570.1 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0243270 AT4G02570.3 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0243270 AT1G02980.1 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0243270 AT1G02980.2 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0243270 AT1G43140.1 65.405 740 225 3 4 742 12 721 0.0 1005
Msa0243270 AT1G59790.2 57.552 384 142 3 1 382 6 370 6.37e-153 449
Msa0243270 AT1G59790.1 57.527 372 137 3 1 370 6 358 1.72e-147 436
Msa0243270 AT1G26830.1 34.312 749 434 14 10 742 26 732 9.45e-135 416
Msa0243270 AT1G69670.1 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0243270 AT1G69670.2 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0243270 AT5G46210.1 34.123 718 423 16 37 742 113 792 6.02e-111 355
Msa0243270 AT1G59800.1 54.098 244 108 1 7 250 7 246 2.09e-88 278
Msa0243270 AT2G04660.1 27.041 196 133 2 423 611 543 735 9.25e-11 65.9

Find 182 sgRNAs with CRISPR-Local

Find 614 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTCTGACCACTGGTTTC+TGG 0.082911 2_2:-20153669 Msa0243270:CDS
TTCTCGTTTCTTTCACTATT+TGG 0.108715 2_2:-20157703 Msa0243270:CDS
GCACGATTCTTTACCGAAAA+AGG 0.119181 2_2:-20161093 Msa0243270:five_prime_UTR
CGCAATTCCTATTTCCAATA+TGG 0.172526 2_2:+20152221 None:intergenic
CCTTCACCGAAACCTTTATC+AGG 0.234716 2_2:-20161138 Msa0243270:five_prime_UTR
CAGGTTTACAAGGAAGTAAA+TGG 0.245353 2_2:-20157504 Msa0243270:CDS
CATTATCTTTGTCTCTTTCC+AGG 0.286661 2_2:+20152579 None:intergenic
GAATCGAAGCCTCACTTCTA+TGG 0.287492 2_2:-20152126 Msa0243270:three_prime_UTR
TCCCACCCCATATTGGAAAT+AGG 0.304343 2_2:-20152228 Msa0243270:three_prime_UTR
CACAACCTGCTTAAATATAC+TGG 0.307077 2_2:+20156606 None:intergenic
GCAGTTAGGCCGCATGTTTA+AGG 0.326909 2_2:-20152743 Msa0243270:intron
TTAGATATATTTGTGGAGAT+TGG 0.327866 2_2:-20157318 Msa0243270:CDS
TGCAAATTTGTTCAAGTACT+TGG 0.329885 2_2:-20152558 Msa0243270:CDS
AATCAGGACAAGAATCTTCT+AGG 0.335743 2_2:+20157202 None:intergenic
GCTGACTTGCTTTCGCGATT+TGG 0.336069 2_2:-20157631 Msa0243270:intron
ACTTACTTGGATTTATTCCT+TGG 0.340182 2_2:-20153442 Msa0243270:CDS
TCAATTCCGGGGTCTACATT+AGG 0.343246 2_2:+20153703 None:intergenic
AATATTCCTCAAAGCTTGTT+TGG 0.345806 2_2:+20153737 None:intergenic
AAATTTCCCACTTATATTGC+AGG 0.345820 2_2:+20153416 None:intergenic
GCAATTCCTATTTCCAATAT+GGG 0.346266 2_2:+20152222 None:intergenic
GGTTGCAGAGTTTGCTGTTA+AGG 0.347092 2_2:-20160502 Msa0243270:intron
ACAGAAGCTGAAGAATATTC+TGG 0.348230 2_2:-20160407 Msa0243270:CDS
TGAATTAAATTCAAAATAAT+CGG 0.349101 2_2:+20153053 None:intergenic
TGTTGTTTACCTATAAAATT+CGG 0.355958 2_2:+20154811 None:intergenic
TTCTTAATTGCCTTGACATC+AGG 0.359018 2_2:+20152632 None:intergenic
ACTGAGTTATTCTGAGATAA+TGG 0.365223 2_2:-20153184 Msa0243270:CDS
TGTGGAATAGAGTATGATTC+TGG 0.367247 2_2:+20155189 None:intergenic
CTAAGCACAGAAAACTTACT+TGG 0.371035 2_2:-20153455 Msa0243270:CDS
ACCATAAAATCATGGTTAGA+TGG 0.374090 2_2:-20157728 Msa0243270:CDS
GGTAATATTGCTTTCGTGCT+TGG 0.374335 2_2:+20153078 None:intergenic
CCTCAATCTTCCTGCAGAAA+TGG 0.374444 2_2:-20153626 Msa0243270:intron
GCTTGAAACGGGAGAAAGAT+AGG 0.374850 2_2:-20157085 Msa0243270:CDS
CACCAACGTTGTACCTTCTT+CGG 0.375640 2_2:+20156459 None:intergenic
ACTTATAGCTCCTTCCTTCA+AGG 0.379766 2_2:+20152431 None:intergenic
GTTACTCTCAATTTCCTTGA+AGG 0.383477 2_2:-20152445 Msa0243270:three_prime_UTR
TTATTTCTCCCACCCCATAT+TGG 0.383729 2_2:-20152235 Msa0243270:three_prime_UTR
CTTCCTCCGCTTAATGAAGT+TGG 0.395619 2_2:-20157654 Msa0243270:CDS
AGCCAGCCGATACTTGGATA+TGG 0.398900 2_2:+20152391 None:intergenic
TTGCGTTACTTTAGTTTAAG+TGG 0.403889 2_2:-20152203 Msa0243270:three_prime_UTR
TTCTAAAATACCCAAAGGCT+TGG 0.406125 2_2:-20156638 Msa0243270:CDS
TGTGATAATATTCTCAAGAA+AGG 0.408911 2_2:-20155014 Msa0243270:CDS
GGGGTGGGAGAAATAATTAA+TGG 0.411150 2_2:+20152242 None:intergenic
TCAGAGCTGAACTGAGGTTC+AGG 0.411217 2_2:+20160376 None:intergenic
TACAGTAGCCAGCCGATACT+TGG 0.411984 2_2:+20152385 None:intergenic
CTTGTACTTGGCACATGATA+AGG 0.420595 2_2:+20153116 None:intergenic
TTCCTCCGCTTAATGAAGTT+GGG 0.422753 2_2:-20157653 Msa0243270:CDS
AGAAACCCTGATAAAGGTTT+CGG 0.422836 2_2:+20161132 None:intergenic
AGCGGTTGGGAATAGTCATT+TGG 0.424285 2_2:+20160210 None:intergenic
AATGTCTGCAGCCGGAGAAA+AGG 0.425273 2_2:-20155384 Msa0243270:intron
GGAGATTGGAATGGGGCATA+TGG 0.426092 2_2:-20157304 Msa0243270:CDS
CTTGTTAAGAATCTTGTACT+TGG 0.426803 2_2:+20153104 None:intergenic
TAGCGAGCCCAAGTTATTAG+AGG 0.429320 2_2:-20157039 Msa0243270:intron
AGTAACTGTCAAGTCAATTC+CGG 0.431096 2_2:+20153690 None:intergenic
TGCTTAAATATACTGGAAAC+AGG 0.431414 2_2:+20156613 None:intergenic
GGAAACAGGATCCAAGCCTT+TGG 0.432362 2_2:+20156627 None:intergenic
TAAAGAATCGTGCGCGATGA+TGG 0.434250 2_2:+20161103 None:intergenic
AGTAAGAGAAACCCTGATAA+AGG 0.435682 2_2:+20161126 None:intergenic
ATTCTCGAAAGGCTTCAAAC+TGG 0.437747 2_2:-20157227 Msa0243270:CDS
GAAACAGGATCCAAGCCTTT+GGG 0.444806 2_2:+20156628 None:intergenic
ATATTTGTGGAGATTGGAAT+GGG 0.445460 2_2:-20157312 Msa0243270:CDS
AGGTCAAAAGATTTGTAACT+AGG 0.446358 2_2:+20153646 None:intergenic
GTAACTGTCAAGTCAATTCC+GGG 0.448288 2_2:+20153691 None:intergenic
TATAATCAAGTAGGCCTAGA+TGG 0.450614 2_2:-20152326 Msa0243270:three_prime_UTR
ACAGTTACTGTTCTGACCAC+TGG 0.451735 2_2:-20153676 Msa0243270:CDS
CGGAGAAAAGGGATATTGTT+GGG 0.453652 2_2:-20155372 Msa0243270:CDS
AACCATAAAATGAGTGGGTA+TGG 0.458748 2_2:-20152154 Msa0243270:three_prime_UTR
CTTACTTGGATTTATTCCTT+GGG 0.459703 2_2:-20153441 Msa0243270:CDS
ATGTCTGCAGCCGGAGAAAA+GGG 0.463275 2_2:-20155383 Msa0243270:intron
CAGAGTTTGCTGTTAAGGCT+AGG 0.464358 2_2:-20160497 Msa0243270:five_prime_UTR
ACTCCTCTCATGGTCATCAT+TGG 0.466098 2_2:+20153949 None:intergenic
AGAATATACCTCTAATAACT+TGG 0.467807 2_2:+20157031 None:intergenic
TTCTCATCCACAGGAGGAAG+AGG 0.467931 2_2:+20152886 None:intergenic
GGCGGAGGAGTGCTTGAAAC+GGG 0.472033 2_2:-20157096 Msa0243270:CDS
CTCCATATCCAAGTATCGGC+TGG 0.476819 2_2:-20152393 Msa0243270:three_prime_UTR
CCGGAGAAAAGGGATATTGT+TGG 0.478111 2_2:-20155373 Msa0243270:CDS
TGTTTCCAGTATATTTAAGC+AGG 0.481609 2_2:-20156611 Msa0243270:intron
TGGTCAATTTACTTCAAAGA+TGG 0.482034 2_2:-20153897 Msa0243270:CDS
TGGATCGATACTTTATTGCT+CGG 0.482660 2_2:-20157683 Msa0243270:CDS
TATAAATATACCATTTCTGC+AGG 0.482865 2_2:+20153616 None:intergenic
TATTGTTGGGTTACAAGAGC+AGG 0.483324 2_2:-20155359 Msa0243270:intron
AAATGTATTAGATATATTTG+TGG 0.483791 2_2:-20157325 Msa0243270:CDS
CAAAATTTACAGACAAAATG+AGG 0.486053 2_2:-20153032 Msa0243270:CDS
AATACCTTGAGCATATAATC+AGG 0.490182 2_2:+20157186 None:intergenic
CTTGATCTCTCGAGACTACC+TGG 0.495638 2_2:-20152597 Msa0243270:CDS
AACCGCTGTATGATAAGTAC+AGG 0.495768 2_2:-20160194 Msa0243270:CDS
ATGGAGTGCGTTGAGCAGTT+AGG 0.495951 2_2:-20152757 Msa0243270:CDS
CTCTCAATTTCCTTGAAGGA+AGG 0.497162 2_2:-20152441 Msa0243270:three_prime_UTR
CCATTTCTGCAGGAAGATTG+AGG 0.497896 2_2:+20153626 None:intergenic
AGAGTTTGCTGTTAAGGCTA+GGG 0.499982 2_2:-20160496 Msa0243270:five_prime_UTR
AGGTTTACAAGGAAGTAAAT+GGG 0.502271 2_2:-20157503 Msa0243270:CDS
ACTGATTGTGACTACTTACC+AGG 0.504108 2_2:-20153376 Msa0243270:intron
TTGTTAAAATACTCCTCTCA+TGG 0.505784 2_2:+20153939 None:intergenic
ATGCAGCATGTTACCGAAGA+AGG 0.506218 2_2:-20156472 Msa0243270:intron
TATATTTGTGGAGATTGGAA+TGG 0.508425 2_2:-20157313 Msa0243270:CDS
CTATTGATTTAGAGCAAGGA+TGG 0.515189 2_2:-20160450 Msa0243270:CDS
TACTTCAAAGATGGAAGGAA+TGG 0.516259 2_2:-20153888 Msa0243270:intron
AGGTACAACGTTGGTGAAGT+TGG 0.516536 2_2:-20156452 Msa0243270:CDS
TAAGTACAGGGAGGCATTTG+AGG 0.519320 2_2:-20160181 Msa0243270:CDS
TTCTGCATATTATTCTCGAA+AGG 0.520286 2_2:-20157238 Msa0243270:CDS
TGCGAGAACTTGTGAGGAGG+TGG 0.525524 2_2:-20157755 Msa0243270:CDS
GGAGAACCAAACAAGCTTTG+AGG 0.525529 2_2:-20153743 Msa0243270:CDS
TTGGGTACCTGCAATATAAG+TGG 0.526090 2_2:-20153423 Msa0243270:CDS
GGTTGGGAATAGTCATTTGG+AGG 0.527736 2_2:+20160213 None:intergenic
GTACTTATCATACAGCGGTT+GGG 0.527755 2_2:+20160197 None:intergenic
TGTACTTATCATACAGCGGT+TGG 0.527818 2_2:+20160196 None:intergenic
TCCTATTTCCAATATGGGGT+GGG 0.527993 2_2:+20152227 None:intergenic
TTATCAATTCCAGGTTTACA+AGG 0.528929 2_2:-20157514 Msa0243270:intron
AAGACTATTGATTTAGAGCA+AGG 0.536063 2_2:-20160454 Msa0243270:CDS
CCTGATAAAGGTTTCGGTGA+AGG 0.537083 2_2:+20161138 None:intergenic
TCGTGCTTCTCTCTCAAAGA+AGG 0.537882 2_2:+20157789 None:intergenic
ATGTGTGCTCATGTTGGAAA+AGG 0.540419 2_2:-20152361 Msa0243270:three_prime_UTR
TTGTCCTGATTATATGCTCA+AGG 0.542877 2_2:-20157190 Msa0243270:intron
AGGCGGAGGAGTGCTTGAAA+CGG 0.547934 2_2:-20157097 Msa0243270:CDS
AAGTCATCAGATGTGAATGC+AGG 0.552002 2_2:+20152278 None:intergenic
AGTAGTCACAATCAGTTCCA+TGG 0.552172 2_2:+20153383 None:intergenic
GCAGATTCCTCTTCCTCCTG+TGG 0.555922 2_2:-20152893 Msa0243270:intron
GAATATACCTCTAATAACTT+GGG 0.556355 2_2:+20157032 None:intergenic
TTCCTATTTCCAATATGGGG+TGG 0.557692 2_2:+20152226 None:intergenic
AGACAAAATGAGGAGGATCA+AGG 0.560398 2_2:-20153022 Msa0243270:intron
GTGGGCTAACCATAAAATCA+TGG 0.561200 2_2:-20157736 Msa0243270:CDS
CTTCATAATACGCACAATTG+AGG 0.561336 2_2:+20152813 None:intergenic
GATCAGTTCTATAATCAAGT+AGG 0.565042 2_2:-20152335 Msa0243270:three_prime_UTR
ACTTATATTGCAGGTACCCA+AGG 0.565881 2_2:+20153425 None:intergenic
CGCACTCCATCACTAACTGT+TGG 0.568475 2_2:+20152770 None:intergenic
CTTCACCGAAACCTTTATCA+GGG 0.570432 2_2:-20161137 Msa0243270:five_prime_UTR
AACAGTCGTTCACATATGCC+AGG 0.571635 2_2:+20155213 None:intergenic
CTGTAAATGTGTGCTCATGT+TGG 0.571738 2_2:-20152367 Msa0243270:three_prime_UTR
AATTGAAGAAACACTTGAGA+AGG 0.575640 2_2:-20154964 Msa0243270:intron
CTTAGGTTGAAGACTTGTCA+AGG 0.575826 2_2:-20156675 Msa0243270:intron
TGCAGAAGTGTCTTTGAGCA+TGG 0.576831 2_2:+20157254 None:intergenic
TGGGCTCGCTACTAGAGTGC+AGG 0.577235 2_2:+20157051 None:intergenic
TACAGATTTGACACTGGCAA+AGG 0.577327 2_2:-20153764 Msa0243270:CDS
AAATTACCAACAGTTAGTGA+TGG 0.577805 2_2:-20152776 Msa0243270:CDS
TATTGATTTAGAGCAAGGAT+GGG 0.578636 2_2:-20160449 Msa0243270:CDS
AAGCTGAAGAATATTCTGGA+AGG 0.583829 2_2:-20160403 Msa0243270:CDS
CAAGTACAAGATTCTTAACA+AGG 0.590535 2_2:-20153103 Msa0243270:CDS
CAATTTACTTCAAAGATGGA+AGG 0.590929 2_2:-20153893 Msa0243270:CDS
CTTGAAACGGGAGAAAGATA+GGG 0.592854 2_2:-20157084 Msa0243270:CDS
AGAACATACAAGAGAAATCA+CGG 0.593996 2_2:+20157467 None:intergenic
CAATTCCTATTTCCAATATG+GGG 0.598728 2_2:+20152223 None:intergenic
AGGGATTATCGATGAGTGAA+CGG 0.601104 2_2:-20160477 Msa0243270:exon
TTAAATTCAAAATAATCGGT+AGG 0.601478 2_2:+20153057 None:intergenic
AGCTGAAGAATATTCTGGAA+GGG 0.602844 2_2:-20160402 Msa0243270:CDS
GTCAGCCCAACTTCATTAAG+CGG 0.606052 2_2:+20157648 None:intergenic
AAGATTGATCAAGAACGTGA+AGG 0.609119 2_2:-20157375 Msa0243270:CDS
AGATGCAGCAAGTAACAAGA+AGG 0.609700 2_2:-20156425 Msa0243270:intron
GCAGATAGCAAAACAAGATG+AGG 0.611050 2_2:-20152494 Msa0243270:three_prime_UTR
TGGGTACCTGCAATATAAGT+GGG 0.615117 2_2:-20153422 Msa0243270:CDS
AGTTATTGAGGATGTTGACA+AGG 0.621478 2_2:-20152857 Msa0243270:CDS
TTATGTTGCGAGAACTTGTG+AGG 0.624498 2_2:-20157761 Msa0243270:CDS
AATAATCCTAATGTAGACCC+CGG 0.627294 2_2:-20153709 Msa0243270:CDS
GATAATATTCTCAAGAAAGG+CGG 0.632646 2_2:-20155011 Msa0243270:CDS
TGCATTACTTAGAGATGACA+AGG 0.635739 2_2:-20156779 Msa0243270:intron
AGAATAACTCAGTCTATCTG+AGG 0.636581 2_2:+20153194 None:intergenic
ATCGATACTTTATTGCTCGG+AGG 0.640352 2_2:-20157680 Msa0243270:CDS
ACAAAATTGAAGCAACAATG+TGG 0.645513 2_2:-20153920 Msa0243270:CDS
TTGTGCGTATTATGAAGAGT+CGG 0.646014 2_2:-20152807 Msa0243270:CDS
GCGTATTATGAAGAGTCGGA+AGG 0.646046 2_2:-20152803 Msa0243270:CDS
TATCCTATAGGCTCTTAAGG+AGG 0.649623 2_2:-20155102 Msa0243270:intron
ATGTCAAGGCAATTAAGAAG+CGG 0.652248 2_2:-20152628 Msa0243270:CDS
AGCCCAACTTCATTAAGCGG+AGG 0.655556 2_2:+20157651 None:intergenic
TGAGCTGCATGACAAGTACC+TGG 0.655887 2_2:-20155231 Msa0243270:CDS
AAATATATACCTTAAACATG+CGG 0.656922 2_2:+20152734 None:intergenic
ATAGCAAAACAAGATGAGGA+TGG 0.657624 2_2:-20152490 Msa0243270:three_prime_UTR
GTTTGCGCAGCCTGATGTCA+AGG 0.659356 2_2:-20152642 Msa0243270:intron
TATTTGTGGAGATTGGAATG+GGG 0.661334 2_2:-20157311 Msa0243270:CDS
TCAGGTTACAGATTTGACAC+TGG 0.667474 2_2:-20153770 Msa0243270:intron
GCGAGAACTTGTGAGGAGGT+GGG 0.667854 2_2:-20157754 Msa0243270:CDS
CGCAACGCACCATAGAAGTG+AGG 0.678612 2_2:+20152117 None:intergenic
GTGCCAATGATGACCATGAG+AGG 0.678765 2_2:-20153952 Msa0243270:CDS
TCCCTGTACTTATCATACAG+CGG 0.679899 2_2:+20160192 None:intergenic
AAATTGAAGCAACAATGTGG+TGG 0.685406 2_2:-20153917 Msa0243270:CDS
TGAACCTCAGTTCAGCTCTG+AGG 0.696799 2_2:-20160374 Msa0243270:CDS
TGTTGCGAGAACTTGTGAGG+AGG 0.698023 2_2:-20157758 Msa0243270:CDS
ACCGCTGTATGATAAGTACA+GGG 0.699917 2_2:-20160193 Msa0243270:CDS
TAGTCCTCAGAGCTGAACTG+AGG 0.704381 2_2:+20160370 None:intergenic
AATTTACAGACAAAATGAGG+AGG 0.707626 2_2:-20153029 Msa0243270:CDS
GTAACTAGGCCAGAAACCAG+TGG 0.710105 2_2:+20153660 None:intergenic
GAATCATACTCTATTCCACA+AGG 0.714768 2_2:-20155186 Msa0243270:intron
TACCGAAGAAGGTACAACGT+TGG 0.733065 2_2:-20156461 Msa0243270:CDS
TAACTGTCAAGTCAATTCCG+GGG 0.734741 2_2:+20153692 None:intergenic
GCTGTATGATAAGTACAGGG+AGG 0.780823 2_2:-20160190 Msa0243270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTAAAATTTTTAT+TGG - chr2_2:20152416-20152435 Msa0243270:three_prime_UTR 0.0%
!!! TTATCATTATTTTGATTTTT+TGG - chr2_2:20152725-20152744 Msa0243270:intron 10.0%
!!! TGTTTTAGTTTTATATTAAT+TGG - chr2_2:20153016-20153035 Msa0243270:intron 10.0%
!!! GTTTTAGTTTTATATTAATT+GGG - chr2_2:20153017-20153036 Msa0243270:intron 10.0%
!! TTGTAAAAAAAAAAAATATC+GGG - chr2_2:20154235-20154254 Msa0243270:intron 10.0%
!! AAAAAAAAAAAAAAACACAT+TGG + chr2_2:20155797-20155816 None:intergenic 10.0%
!! TGAATTAAATTCAAAATAAT+CGG + chr2_2:20160282-20160301 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:20157697-20157716 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:20157697-20157716 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:20157697-20157716 None:intergenic 100.0%
!!! TTGATTTTTTGGTTTAAATT+TGG - chr2_2:20152736-20152755 Msa0243270:intron 15.0%
!!! TTTGTTTGTTTTGATTTTTT+TGG - chr2_2:20152764-20152783 Msa0243270:CDS 15.0%
!!! ATGTCTATTTTTTACTTTAT+AGG - chr2_2:20153455-20153474 Msa0243270:CDS 15.0%
!!! TGTCTATTTTTTACTTTATA+GGG - chr2_2:20153456-20153475 Msa0243270:CDS 15.0%
!!! ATGAAATGATTTATTTTTCT+TGG - chr2_2:20155330-20155349 Msa0243270:intron 15.0%
!!! TGAAATGATTTATTTTTCTT+GGG - chr2_2:20155331-20155350 Msa0243270:intron 15.0%
!!! TTTTTTTTTTTATCAATTCC+AGG - chr2_2:20155809-20155828 Msa0243270:intron 15.0%
!! AAATGTATTAGATATATTTG+TGG - chr2_2:20156007-20156026 Msa0243270:intron 15.0%
!!! GAAATTATAATTTTCAACTT+AGG - chr2_2:20157149-20157168 Msa0243270:intron 15.0%
!!! AAGACTTCTATATAATTTTA+AGG - chr2_2:20157521-20157540 Msa0243270:intron 15.0%
!!! ATAATTTTAAGGATTCATTA+AGG - chr2_2:20157532-20157551 Msa0243270:intron 15.0%
!!! TAATTTTAAGGATTCATTAA+GGG - chr2_2:20157533-20157552 Msa0243270:intron 15.0%
!! ATTCAGTTTATGTTTATAAT+AGG - chr2_2:20157779-20157798 Msa0243270:CDS 15.0%
!! AAAAATGAAAAAAAGATCTT+GGG + chr2_2:20158742-20158761 None:intergenic 15.0%
!! AAAAAATGAAAAAAAGATCT+TGG + chr2_2:20158743-20158762 None:intergenic 15.0%
!!! AATTTTTGGAAAAAAAAAAC+TGG - chr2_2:20159028-20159047 Msa0243270:intron 15.0%
!!! AATACTTTTTATCTAAATCT+AGG + chr2_2:20159782-20159801 None:intergenic 15.0%
!!! TTTATTGGTTAGTTGAATTT+TGG - chr2_2:20152431-20152450 Msa0243270:three_prime_UTR 20.0%
!!! TTGATTGTTTAGTTGAATTT+TGG - chr2_2:20152562-20152581 Msa0243270:CDS 20.0%
!!! TTTCATTGTTGTTGAAATTT+AGG - chr2_2:20152620-20152639 Msa0243270:CDS 20.0%
!! TTGAAATTTAGGAACAATTA+GGG - chr2_2:20152631-20152650 Msa0243270:CDS 20.0%
!!! TGATTTTTTTGGTTGAAATT+TGG - chr2_2:20152775-20152794 Msa0243270:CDS 20.0%
!!! TTTATGTTTTAACGAATTTG+TGG - chr2_2:20152801-20152820 Msa0243270:CDS 20.0%
!!! AATTTAAAATACAATCAGAC+AGG + chr2_2:20153236-20153255 None:intergenic 20.0%
!! ATGTATTCTTATTGTGTAAA+TGG - chr2_2:20154596-20154615 Msa0243270:intron 20.0%
!!! TTATGATTTAAGACAGATTT+GGG + chr2_2:20154988-20155007 None:intergenic 20.0%
!! TTAGTTAACTTACTAATAGT+TGG - chr2_2:20155065-20155084 Msa0243270:CDS 20.0%
!!! GAAATGATTTATTTTTCTTG+GGG - chr2_2:20155332-20155351 Msa0243270:intron 20.0%
!!! AAATGATTTATTTTTCTTGG+GGG - chr2_2:20155333-20155352 Msa0243270:intron 20.0%
!! TACATAATCAAAGGAAAAAA+CGG + chr2_2:20155453-20155472 None:intergenic 20.0%
!! ATTAACAGATACATAATCAA+AGG + chr2_2:20155462-20155481 None:intergenic 20.0%
!!! ATAACTGAAATTCACTTTTT+GGG - chr2_2:20155508-20155527 Msa0243270:intron 20.0%
!! AAACAGAAGCTAAATAATAT+TGG + chr2_2:20156195-20156214 None:intergenic 20.0%
!! AACATTTCACAAAGAAAAAA+AGG + chr2_2:20156456-20156475 None:intergenic 20.0%
!!! ATTTTGACAACATATATAGA+AGG + chr2_2:20156776-20156795 None:intergenic 20.0%
!! TCTATATATGTTGTCAAAAT+TGG - chr2_2:20156776-20156795 Msa0243270:intron 20.0%
!! CTATATATGTTGTCAAAATT+GGG - chr2_2:20156777-20156796 Msa0243270:intron 20.0%
!! TATATATGTTGTCAAAATTG+GGG - chr2_2:20156778-20156797 Msa0243270:intron 20.0%
!!! TGATTGATAATTTTCAACTT+AGG - chr2_2:20157083-20157102 Msa0243270:CDS 20.0%
!!! TGTATATTATTTTCTGTTAC+TGG - chr2_2:20157106-20157125 Msa0243270:intron 20.0%
!! AAATGACAATAAATATGACA+CGG + chr2_2:20157231-20157250 None:intergenic 20.0%
!!! AAGATTATTACTATTTTGCT+TGG + chr2_2:20157449-20157468 None:intergenic 20.0%
!! ATTCATTAAGGGAATATAAA+AGG - chr2_2:20157544-20157563 Msa0243270:intron 20.0%
!! TTGCAGTTAAACTATAAAAT+TGG + chr2_2:20158014-20158033 None:intergenic 20.0%
!! AATTGATATTGATCCATTTA+TGG - chr2_2:20158032-20158051 Msa0243270:intron 20.0%
!!! ATTTCTTTTTATCTATTTGC+AGG - chr2_2:20158456-20158475 Msa0243270:intron 20.0%
!!! TGTTGTTTACCTATAAAATT+CGG + chr2_2:20158524-20158543 None:intergenic 20.0%
!! TGATAATAGAAATCTCATAT+TGG + chr2_2:20158713-20158732 None:intergenic 20.0%
!! AAAATGAAAAAAAGATCTTG+GGG + chr2_2:20158741-20158760 None:intergenic 20.0%
!!! AATTTTTATTTAGCCCTTTA+AGG + chr2_2:20158841-20158860 None:intergenic 20.0%
!!! GAAAAACTATTAAAAGCATA+TGG + chr2_2:20158973-20158992 None:intergenic 20.0%
!! AAAATACAAACAAAACTGTA+AGG + chr2_2:20159149-20159168 None:intergenic 20.0%
!! AGAAAATTCCATTGTTTATT+TGG - chr2_2:20159533-20159552 Msa0243270:intron 20.0%
!! GAAAATTCCATTGTTTATTT+GGG - chr2_2:20159534-20159553 Msa0243270:intron 20.0%
!! TTAAATTCAAAATAATCGGT+AGG + chr2_2:20160278-20160297 None:intergenic 20.0%
!! AAATATATACCTTAAACATG+CGG + chr2_2:20160601-20160620 None:intergenic 20.0%
!! TTAAAAACCATAAAATGAGT+GGG - chr2_2:20161173-20161192 Msa0243270:five_prime_UTR 20.0%
!!! GATTTGTTTTGTTATGCTTA+TGG - chr2_2:20152279-20152298 Msa0243270:three_prime_UTR 25.0%
!!! TGGTTTTGTTATACTAGATT+TGG - chr2_2:20152299-20152318 Msa0243270:three_prime_UTR 25.0%
! TTGGTTAAATCTGAGAATTT+AGG - chr2_2:20152318-20152337 Msa0243270:three_prime_UTR 25.0%
! TGGTTAAATCTGAGAATTTA+GGG - chr2_2:20152319-20152338 Msa0243270:three_prime_UTR 25.0%
! ATGTTTATTGCGATTTCATT+CGG - chr2_2:20152368-20152387 Msa0243270:three_prime_UTR 25.0%
!!! GGAATTTGATTTGAGAATTT+AGG - chr2_2:20152452-20152471 Msa0243270:three_prime_UTR 25.0%
!! TGAGAATTTAGGATTTAGTT+TGG - chr2_2:20152463-20152482 Msa0243270:three_prime_UTR 25.0%
!! GAGAATTTAGGATTTAGTTT+GGG - chr2_2:20152464-20152483 Msa0243270:three_prime_UTR 25.0%
!!! AGAATTTAGGATTTAGTTTG+GGG - chr2_2:20152465-20152484 Msa0243270:three_prime_UTR 25.0%
! GTTGAAATTTAGGAACAATT+AGG - chr2_2:20152630-20152649 Msa0243270:CDS 25.0%
! TTAACGAATTTGTGGAAATT+TGG - chr2_2:20152809-20152828 Msa0243270:CDS 25.0%
!! TTTTTACTTTATAGGGCTAT+TGG - chr2_2:20153463-20153482 Msa0243270:CDS 25.0%
!! TGACACATTTTCTTCTTTTT+AGG - chr2_2:20153564-20153583 Msa0243270:intron 25.0%
!! TCCTCAACAAAATAATGTTT+TGG - chr2_2:20153657-20153676 Msa0243270:CDS 25.0%
!!! TCCAAAACATTATTTTGTTG+AGG + chr2_2:20153661-20153680 None:intergenic 25.0%
!!! TTGATTTTTGAGTAAGTAGT+TGG - chr2_2:20153717-20153736 Msa0243270:CDS 25.0%
! TACAAAATGTTGTCAAATAG+CGG + chr2_2:20154135-20154154 None:intergenic 25.0%
!! ATTATTTCTCAATCTGGATT+GGG - chr2_2:20154300-20154319 Msa0243270:intron 25.0%
! CTGCTTCAATTTAGAAAAAT+AGG + chr2_2:20154347-20154366 None:intergenic 25.0%
!!! TGGGTTTTATTTATATAACC+TGG + chr2_2:20154376-20154395 None:intergenic 25.0%
! AGGTTATATAAATAAAACCC+AGG - chr2_2:20154375-20154394 Msa0243270:intron 25.0%
!!! GTACACTTTTTCCTATTAAT+AGG - chr2_2:20154781-20154800 Msa0243270:intron 25.0%
! GATCGTAATATCCTATTAAT+AGG + chr2_2:20154795-20154814 None:intergenic 25.0%
!! CTTATGATTTAAGACAGATT+TGG + chr2_2:20154989-20155008 None:intergenic 25.0%
!! CTTTTAGGCAGTAATAAAAA+AGG + chr2_2:20155248-20155267 None:intergenic 25.0%
!!! AATGATTTATTTTTCTTGGG+GGG - chr2_2:20155334-20155353 Msa0243270:intron 25.0%
!!! CATAACTGAAATTCACTTTT+TGG - chr2_2:20155507-20155526 Msa0243270:intron 25.0%
! ATCTTTAAACAAAAGAGGAT+AGG + chr2_2:20155942-20155961 None:intergenic 25.0%
! GATCAATCTTTAAACAAAAG+AGG + chr2_2:20155947-20155966 None:intergenic 25.0%
! TTAGATATATTTGTGGAGAT+TGG - chr2_2:20156014-20156033 Msa0243270:intron 25.0%
! TTAGCTTCTGTTTAATATTG+TGG - chr2_2:20156202-20156221 Msa0243270:intron 25.0%
! GAATATACCTCTAATAACTT+GGG + chr2_2:20156303-20156322 None:intergenic 25.0%
! AGAATATACCTCTAATAACT+TGG + chr2_2:20156304-20156323 None:intergenic 25.0%
!!! AATGTTCTTTTTCAAGAAGT+TGG + chr2_2:20156523-20156542 None:intergenic 25.0%
! ATTGTAACACAAATTTGAAC+AGG + chr2_2:20157037-20157056 None:intergenic 25.0%
! TGTTTACGCATAAATTCAAA+AGG - chr2_2:20157395-20157414 Msa0243270:intron 25.0%
!! GCTTGGTAATAACATTTATA+AGG + chr2_2:20157432-20157451 None:intergenic 25.0%
!! AAAGAAAATTTTGTCCGATA+AGG + chr2_2:20157816-20157835 None:intergenic 25.0%
! ATGTAAAGCACAAAATCAAA+CGG + chr2_2:20157881-20157900 None:intergenic 25.0%
!! TCTGAAAGATTTTATCCTAT+AGG - chr2_2:20158218-20158237 Msa0243270:intron 25.0%
!!! TTTTGAGATATTTTGCAACA+AGG - chr2_2:20158254-20158273 Msa0243270:intron 25.0%
!!! TTTGAGATATTTTGCAACAA+GGG - chr2_2:20158255-20158274 Msa0243270:intron 25.0%
! GAGAATATTATCACAAAAAG+TGG + chr2_2:20158313-20158332 None:intergenic 25.0%
! TGTGATAATATTCTCAAGAA+AGG - chr2_2:20158318-20158337 Msa0243270:intron 25.0%
! AATCATCAAGTTTAAGCATA+TGG + chr2_2:20158419-20158438 None:intergenic 25.0%
!! ATTTGTTTGCCGAATTTTAT+AGG - chr2_2:20158512-20158531 Msa0243270:intron 25.0%
! ATAGGTAAACAACATAGAAA+AGG - chr2_2:20158530-20158549 Msa0243270:intron 25.0%
! TCCAAAAGATTTAAACCATT+TGG - chr2_2:20158640-20158659 Msa0243270:intron 25.0%
!! TCCAAATGGTTTAAATCTTT+TGG + chr2_2:20158644-20158663 None:intergenic 25.0%
! ATCTCATATTGGACAAAATA+GGG + chr2_2:20158702-20158721 None:intergenic 25.0%
! AATCTCATATTGGACAAAAT+AGG + chr2_2:20158703-20158722 None:intergenic 25.0%
! AAATGAAAAAAAGATCTTGG+GGG + chr2_2:20158740-20158759 None:intergenic 25.0%
!!! GAAAGTCGATAGTTATTTTT+GGG - chr2_2:20158810-20158829 Msa0243270:intron 25.0%
!!! AAAGTCGATAGTTATTTTTG+GGG - chr2_2:20158811-20158830 Msa0243270:intron 25.0%
! TGGAAAAAAAAAACTGGATA+TGG - chr2_2:20159034-20159053 Msa0243270:intron 25.0%
!!! TTTGCTGTTCTGTTAATATA+AGG - chr2_2:20159065-20159084 Msa0243270:intron 25.0%
! ATGACATTGTTGAATCTTTA+TGG - chr2_2:20159178-20159197 Msa0243270:intron 25.0%
! TATAAATATACCATTTCTGC+AGG + chr2_2:20159719-20159738 None:intergenic 25.0%
!! CTGTTCTCTTTATTTATTGT+AGG - chr2_2:20159812-20159831 Msa0243270:intron 25.0%
! GATATGTACAAATTCTTGTA+TGG - chr2_2:20160046-20160065 Msa0243270:intron 25.0%
!!! GTTGTGTTTTGCTTTTTAAT+AGG - chr2_2:20160091-20160110 Msa0243270:intron 25.0%
! CAAAATTTACAGACAAAATG+AGG - chr2_2:20160300-20160319 Msa0243270:intron 25.0%
! TGAGAAGAAAAAAGTTATTG+AGG - chr2_2:20160463-20160482 Msa0243270:CDS 25.0%
! ACAAAACAATGTCATAAAAG+GGG + chr2_2:20160626-20160645 None:intergenic 25.0%
! GACAAAACAATGTCATAAAA+GGG + chr2_2:20160627-20160646 None:intergenic 25.0%
!!! CTTTTATGACATTGTTTTGT+CGG - chr2_2:20160626-20160645 Msa0243270:intron 25.0%
! TATAATCCTGAATTGTGATA+TGG - chr2_2:20160660-20160679 Msa0243270:intron 25.0%
! CTTAAAAACCATAAAATGAG+TGG - chr2_2:20161172-20161191 Msa0243270:five_prime_UTR 25.0%
! TGAGAATTTAGGGTTTAGTT+TGG - chr2_2:20152329-20152348 Msa0243270:three_prime_UTR 30.0%
! GAGAATTTAGGGTTTAGTTT+GGG - chr2_2:20152330-20152349 Msa0243270:three_prime_UTR 30.0%
!! AGAATTTAGGGTTTAGTTTG+GGG - chr2_2:20152331-20152350 Msa0243270:three_prime_UTR 30.0%
!! GAATTTAGGATTTAGTTTGG+GGG - chr2_2:20152466-20152485 Msa0243270:three_prime_UTR 30.0%
!! AATTTAGGATTTAGTTTGGG+GGG - chr2_2:20152467-20152486 Msa0243270:three_prime_UTR 30.0%
TTACTGCAATTTCATTCAGT+TGG - chr2_2:20152508-20152527 Msa0243270:three_prime_UTR 30.0%
ATTTAGGAACAATTAGGGTT+TGG - chr2_2:20152636-20152655 Msa0243270:intron 30.0%
TTTAGGAACAATTAGGGTTT+GGG - chr2_2:20152637-20152656 Msa0243270:intron 30.0%
!! AAGACTATTGATTTAGAGCA+AGG - chr2_2:20152878-20152897 Msa0243270:CDS 30.0%
!! TATTGATTTAGAGCAAGGAT+GGG - chr2_2:20152883-20152902 Msa0243270:CDS 30.0%
! TTGTTTGCAACTTTTCTACT+AGG - chr2_2:20153380-20153399 Msa0243270:CDS 30.0%
! TGTTTGCAACTTTTCTACTA+GGG - chr2_2:20153381-20153400 Msa0243270:CDS 30.0%
TGTCATTGATATCATGTCAT+AGG + chr2_2:20153549-20153568 None:intergenic 30.0%
CTATAATTATCTAGTCCATG+TGG + chr2_2:20153695-20153714 None:intergenic 30.0%
!! AAAGTAGTTGGTAGCAAAAA+GGG + chr2_2:20153937-20153956 None:intergenic 30.0%
! AATAGTGGTTTGTCCAAATT+CGG - chr2_2:20154176-20154195 Msa0243270:intron 30.0%
! GATTATTTCTCAATCTGGAT+TGG - chr2_2:20154299-20154318 Msa0243270:intron 30.0%
! TTTTCTAAATTGAAGCAGCT+TGG - chr2_2:20154349-20154368 Msa0243270:intron 30.0%
!!! CCGTTTTCATTTTAAAACCT+GGG + chr2_2:20154395-20154414 None:intergenic 30.0%
!!! CCCAGGTTTTAAAATGAAAA+CGG - chr2_2:20154392-20154411 Msa0243270:intron 30.0%
!!! TCCGTTTTCATTTTAAAACC+TGG + chr2_2:20154396-20154415 None:intergenic 30.0%
!!! GGTTTTAAAATGAAAACGGA+AGG - chr2_2:20154396-20154415 Msa0243270:intron 30.0%
AAGTAACTGAACTAAAACAG+AGG + chr2_2:20154570-20154589 None:intergenic 30.0%
TCATGTTCTTCATGAACTTA+TGG - chr2_2:20154645-20154664 Msa0243270:intron 30.0%
! TGATCCAGATCTCTAAATTT+TGG - chr2_2:20154879-20154898 Msa0243270:intron 30.0%
GATTCCAAAATTTAGAGATC+TGG + chr2_2:20154886-20154905 None:intergenic 30.0%
TAACTAAAGCTAGTTAGAGA+GGG + chr2_2:20155052-20155071 None:intergenic 30.0%
TTAACTAAAGCTAGTTAGAG+AGG + chr2_2:20155053-20155072 None:intergenic 30.0%
TTATAGCGTCATTAGTTGAT+TGG - chr2_2:20155150-20155169 Msa0243270:intron 30.0%
ACCATAAAATCATGGTTAGA+TGG - chr2_2:20155604-20155623 Msa0243270:intron 30.0%
TTCTCGTTTCTTTCACTATT+TGG - chr2_2:20155629-20155648 Msa0243270:intron 30.0%
CTACTAATAGAAAACTCTGA+AGG + chr2_2:20155742-20155761 None:intergenic 30.0%
TTATCAATTCCAGGTTTACA+AGG - chr2_2:20155818-20155837 Msa0243270:intron 30.0%
AGGTTTACAAGGAAGTAAAT+GGG - chr2_2:20155829-20155848 Msa0243270:intron 30.0%
AGAACATACAAGAGAAATCA+CGG + chr2_2:20155868-20155887 None:intergenic 30.0%
TATATTTGTGGAGATTGGAA+TGG - chr2_2:20156019-20156038 Msa0243270:intron 30.0%
ATATTTGTGGAGATTGGAAT+GGG - chr2_2:20156020-20156039 Msa0243270:intron 30.0%
TTCTGCATATTATTCTCGAA+AGG - chr2_2:20156094-20156113 Msa0243270:intron 30.0%
AATACCTTGAGCATATAATC+AGG + chr2_2:20156149-20156168 None:intergenic 30.0%
AATATTGTGGCATTCATTAC+AGG - chr2_2:20156215-20156234 Msa0243270:intron 30.0%
! TTGCTATTATTCCAGCTATT+TGG - chr2_2:20156323-20156342 Msa0243270:intron 30.0%
CTTCTTGAAAAAGAACATTC+TGG - chr2_2:20156524-20156543 Msa0243270:intron 30.0%
GGTACTATTTAAGCGTAATA+TGG - chr2_2:20156574-20156593 Msa0243270:intron 30.0%
TCTTCAACCTAAGCATTTAA+AGG + chr2_2:20156650-20156669 None:intergenic 30.0%
!!! CTCTTTTCTAAAATACCCAA+AGG - chr2_2:20156689-20156708 Msa0243270:intron 30.0%
TGCTTAAATATACTGGAAAC+AGG + chr2_2:20156722-20156741 None:intergenic 30.0%
TGTTTCCAGTATATTTAAGC+AGG - chr2_2:20156721-20156740 Msa0243270:intron 30.0%
! TTTGTAGTTGTCCTTATTTC+TGG - chr2_2:20156941-20156960 Msa0243270:intron 30.0%
! CTTTTCTATTGCAATAATCG+AGG - chr2_2:20156976-20156995 Msa0243270:intron 30.0%
AAAACTAGTACCGCAATAAT+CGG - chr2_2:20156999-20157018 Msa0243270:intron 30.0%
TAAGATTTGGACAATACAGA+AGG + chr2_2:20157744-20157763 None:intergenic 30.0%
GGTAAATTGTTTGCAAAATG+AGG + chr2_2:20157851-20157870 None:intergenic 30.0%
TAAATTAAAATGTCTGCAGC+CGG - chr2_2:20157940-20157959 Msa0243270:intron 30.0%
ATTATACGATCATAACCTTG+TGG + chr2_2:20158164-20158183 None:intergenic 30.0%
! TTTTATCCTATAGGCTCTTA+AGG - chr2_2:20158227-20158246 Msa0243270:intron 30.0%
GATAATATTCTCAAGAAAGG+CGG - chr2_2:20158321-20158340 Msa0243270:intron 30.0%
AATTGAAGAAACACTTGAGA+AGG - chr2_2:20158368-20158387 Msa0243270:intron 30.0%
ACAAAATAGGGAAAACTAAC+GGG + chr2_2:20158690-20158709 None:intergenic 30.0%
GACAAAATAGGGAAAACTAA+CGG + chr2_2:20158691-20158710 None:intergenic 30.0%
!! GGAAAGTCGATAGTTATTTT+TGG - chr2_2:20158809-20158828 Msa0243270:intron 30.0%
!! ATTTTTGGGGAAAACCTTAA+AGG - chr2_2:20158824-20158843 Msa0243270:intron 30.0%
!! TTTTTGGGGAAAACCTTAAA+GGG - chr2_2:20158825-20158844 Msa0243270:intron 30.0%
GATATTAAAAGAGATAGCGA+TGG - chr2_2:20158866-20158885 Msa0243270:intron 30.0%
GAAAGTGAACTGCAATTAAT+TGG - chr2_2:20158910-20158929 Msa0243270:intron 30.0%
!!! GCAGACTGTTTTAGAATTTT+TGG - chr2_2:20159014-20159033 Msa0243270:intron 30.0%
TAATTAACCGAAACCCAAAA+AGG + chr2_2:20159121-20159140 None:intergenic 30.0%
ATTGTTGAATCTTTATGGCA+CGG - chr2_2:20159183-20159202 Msa0243270:intron 30.0%
TTATGAAAGTGAGTTCCATT+AGG + chr2_2:20159287-20159306 None:intergenic 30.0%
ATAATATCATACATCTTGCC+TGG - chr2_2:20159312-20159331 Msa0243270:intron 30.0%
TTGTTAAAATACTCCTCTCA+TGG + chr2_2:20159396-20159415 None:intergenic 30.0%
ACAAAATTGAAGCAACAATG+TGG - chr2_2:20159412-20159431 Msa0243270:intron 30.0%
TGGTCAATTTACTTCAAAGA+TGG - chr2_2:20159435-20159454 Msa0243270:intron 30.0%
CAATTTACTTCAAAGATGGA+AGG - chr2_2:20159439-20159458 Msa0243270:intron 30.0%
GATAGAACCCAAATAAACAA+TGG + chr2_2:20159544-20159563 None:intergenic 30.0%
! TTGTTTATTTGGGTTCTATC+AGG - chr2_2:20159544-20159563 Msa0243270:intron 30.0%
! AATATTCCTCAAAGCTTGTT+TGG + chr2_2:20159598-20159617 None:intergenic 30.0%
AGGTCAAAAGATTTGTAACT+AGG + chr2_2:20159689-20159708 None:intergenic 30.0%
AGATACTATCGAACATTTCT+GGG + chr2_2:20159757-20159776 None:intergenic 30.0%
TAGATACTATCGAACATTTC+TGG + chr2_2:20159758-20159777 None:intergenic 30.0%
! TAAGTGTGTAGAAGTTTTCA+AGG - chr2_2:20159836-20159855 Msa0243270:intron 30.0%
ACTTACTTGGATTTATTCCT+TGG - chr2_2:20159890-20159909 Msa0243270:intron 30.0%
CTTACTTGGATTTATTCCTT+GGG - chr2_2:20159891-20159910 Msa0243270:intron 30.0%
AAATTTCCCACTTATATTGC+AGG + chr2_2:20159919-20159938 None:intergenic 30.0%
GAAATTTGAACCAAAAACCA+TGG - chr2_2:20159932-20159951 Msa0243270:intron 30.0%
TATGCACAAGAAATATAACC+TGG + chr2_2:20159977-20159996 None:intergenic 30.0%
TGGATTTATCTTTACTTACC+CGG - chr2_2:20160066-20160085 Msa0243270:intron 30.0%
AAAAAGCAAAACACAACATC+CGG + chr2_2:20160088-20160107 None:intergenic 30.0%
!! ACTGAGTTATTCTGAGATAA+TGG - chr2_2:20160148-20160167 Msa0243270:intron 30.0%
CTTGTTAAGAATCTTGTACT+TGG + chr2_2:20160231-20160250 None:intergenic 30.0%
CAAGTACAAGATTCTTAACA+AGG - chr2_2:20160229-20160248 Msa0243270:CDS 30.0%
AATTTACAGACAAAATGAGG+AGG - chr2_2:20160303-20160322 Msa0243270:intron 30.0%
!!! CGTAATTATTTTAGTCTCTG+TGG - chr2_2:20160376-20160395 Msa0243270:CDS 30.0%
AAATTACCAACAGTTAGTGA+TGG - chr2_2:20160556-20160575 Msa0243270:intron 30.0%
CGACAAAACAATGTCATAAA+AGG + chr2_2:20160628-20160647 None:intergenic 30.0%
CATTATCCATATCACAATTC+AGG + chr2_2:20160669-20160688 None:intergenic 30.0%
! TGCAAATTTGTTCAAGTACT+TGG - chr2_2:20160774-20160793 Msa0243270:intron 30.0%
! TTTTCTCCATATCCAAGTAT+CGG - chr2_2:20160935-20160954 Msa0243270:intron 30.0%
GATCAGTTCTATAATCAAGT+AGG - chr2_2:20160997-20161016 Msa0243270:intron 30.0%
CAGGCAATAAAAAACCAAAA+AGG + chr2_2:20161038-20161057 None:intergenic 30.0%
CAATTCCTATTTCCAATATG+GGG + chr2_2:20161112-20161131 None:intergenic 30.0%
GCAATTCCTATTTCCAATAT+GGG + chr2_2:20161113-20161132 None:intergenic 30.0%
! TTGCGTTACTTTAGTTTAAG+TGG - chr2_2:20161129-20161148 Msa0243270:five_prime_UTR 30.0%
AGAAACCCTGATAAAGGTTT+CGG + chr2_2:20152203-20152222 None:intergenic 35.0%
AGTAAGAGAAACCCTGATAA+AGG + chr2_2:20152209-20152228 None:intergenic 35.0%
CACGATTCTTTACCGAAAAA+GGG - chr2_2:20152240-20152259 Msa0243270:three_prime_UTR 35.0%
! GAGATAAACGTACCCTTTTT+CGG + chr2_2:20152255-20152274 None:intergenic 35.0%
TTATTGCGATTTCATTCGGT+AGG - chr2_2:20152372-20152391 Msa0243270:three_prime_UTR 35.0%
CAATTTCATTCAGTTGGAGT+TGG - chr2_2:20152514-20152533 Msa0243270:three_prime_UTR 35.0%
TTAGGAACAATTAGGGTTTG+GGG - chr2_2:20152638-20152657 Msa0243270:intron 35.0%
!! CTATTGATTTAGAGCAAGGA+TGG - chr2_2:20152882-20152901 Msa0243270:CDS 35.0%
ACAGAAGCTGAAGAATATTC+TGG - chr2_2:20152925-20152944 Msa0243270:intron 35.0%
AAGCTGAAGAATATTCTGGA+AGG - chr2_2:20152929-20152948 Msa0243270:intron 35.0%
! AGCTGAAGAATATTCTGGAA+GGG - chr2_2:20152930-20152949 Msa0243270:intron 35.0%
TGTAGTCATTTGATCCGTAA+TGG - chr2_2:20153271-20153290 Msa0243270:intron 35.0%
! GCTTGATTGTTGTTGTTGTT+TGG - chr2_2:20153336-20153355 Msa0243270:intron 35.0%
ATATCATGTCATAGGTCACA+AGG + chr2_2:20153541-20153560 None:intergenic 35.0%
GAGGACTACTTATAAGAACT+AGG + chr2_2:20153642-20153661 None:intergenic 35.0%
TAATTATCTAGTCCATGTGG+AGG + chr2_2:20153692-20153711 None:intergenic 35.0%
! ATGTTATGTGGTTAGTTGTG+TGG + chr2_2:20153760-20153779 None:intergenic 35.0%
ACACAACTAACCACATAACA+TGG - chr2_2:20153759-20153778 Msa0243270:CDS 35.0%
AAATGTCTGACCATGTTATG+TGG + chr2_2:20153772-20153791 None:intergenic 35.0%
TGGTTGTTTGTTCTTGTCTA+TGG + chr2_2:20153848-20153867 None:intergenic 35.0%
ACCATACACCATGTAACATT+TGG - chr2_2:20153864-20153883 Msa0243270:intron 35.0%
CCATACACCATGTAACATTT+GGG - chr2_2:20153865-20153884 Msa0243270:intron 35.0%
CATACACCATGTAACATTTG+GGG - chr2_2:20153866-20153885 Msa0243270:intron 35.0%
! CTTTTTCCCCAAATGTTACA+TGG + chr2_2:20153875-20153894 None:intergenic 35.0%
!! GAAAGTAGTTGGTAGCAAAA+AGG + chr2_2:20153938-20153957 None:intergenic 35.0%
AACACCCACTAAATACCTTT+GGG - chr2_2:20154012-20154031 Msa0243270:intron 35.0%
!! CAATCCCAAAGGTATTTAGT+GGG + chr2_2:20154019-20154038 None:intergenic 35.0%
TAGCTGCCATTAACAATATC+TGG - chr2_2:20154205-20154224 Msa0243270:intron 35.0%
ACCTCACCAGATATTGTTAA+TGG + chr2_2:20154214-20154233 None:intergenic 35.0%
AAAAAAAAATATCGGGCGTG+TGG - chr2_2:20154242-20154261 Msa0243270:intron 35.0%
AAATTATTGGGATCGTGAGT+TGG - chr2_2:20154267-20154286 Msa0243270:intron 35.0%
AACAGAGAAACTAAGGGAAA+GGG + chr2_2:20154512-20154531 None:intergenic 35.0%
AAACAGAGAAACTAAGGGAA+AGG + chr2_2:20154513-20154532 None:intergenic 35.0%
GCAAGAAACAGAGAAACTAA+GGG + chr2_2:20154518-20154537 None:intergenic 35.0%
TGCAAGAAACAGAGAAACTA+AGG + chr2_2:20154519-20154538 None:intergenic 35.0%
GGATGAAGTAACTAAAACAG+AGG + chr2_2:20154549-20154568 None:intergenic 35.0%
TCATGAAGAACATGAAACAG+AGG + chr2_2:20154640-20154659 None:intergenic 35.0%
ATAGTAACTACGAATCTCTG+TGG - chr2_2:20154936-20154955 Msa0243270:intron 35.0%
TAGTAACTACGAATCTCTGT+GGG - chr2_2:20154937-20154956 Msa0243270:intron 35.0%
! GATTTAAGACAGATTTGGGA+AGG + chr2_2:20154984-20155003 None:intergenic 35.0%
!! TGAGACTGATTTGAATTTGC+TGG - chr2_2:20155103-20155122 Msa0243270:intron 35.0%
!! CTGATTTGAATTTGCTGGAA+AGG - chr2_2:20155108-20155127 Msa0243270:intron 35.0%
!! TTTGAATTTGCTGGAAAGGA+TGG - chr2_2:20155112-20155131 Msa0243270:intron 35.0%
!! GTCAAGCAGATTTTGCTTTT+AGG + chr2_2:20155263-20155282 None:intergenic 35.0%
TCATGTGGCTCATTTAATTG+AGG - chr2_2:20155374-20155393 Msa0243270:CDS 35.0%
! CATTTAATTGAGGTGTCATG+TGG - chr2_2:20155384-20155403 Msa0243270:intron 35.0%
!!! AAATTCACTTTTTGGGCTTC+AGG - chr2_2:20155515-20155534 Msa0243270:intron 35.0%
! GCCATCTAACCATGATTTTA+TGG + chr2_2:20155608-20155627 None:intergenic 35.0%
TGGATCGATACTTTATTGCT+CGG - chr2_2:20155649-20155668 Msa0243270:intron 35.0%
CATTTACTTCCTTGTAAACC+TGG + chr2_2:20155830-20155849 None:intergenic 35.0%
CAGGTTTACAAGGAAGTAAA+TGG - chr2_2:20155828-20155847 Msa0243270:intron 35.0%
AAGATTGATCAAGAACGTGA+AGG - chr2_2:20155957-20155976 Msa0243270:intron 35.0%
TATTTGTGGAGATTGGAATG+GGG - chr2_2:20156021-20156040 Msa0243270:intron 35.0%
AATCAGGACAAGAATCTTCT+AGG + chr2_2:20156133-20156152 None:intergenic 35.0%
TTGTCCTGATTATATGCTCA+AGG - chr2_2:20156142-20156161 Msa0243270:intron 35.0%
!!! ACAGTTTTAGACCAAATAGC+TGG + chr2_2:20156337-20156356 None:intergenic 35.0%
TGCATTACTTAGAGATGACA+AGG - chr2_2:20156553-20156572 Msa0243270:intron 35.0%
ACAGCTTCCTTTAAATGCTT+AGG - chr2_2:20156640-20156659 Msa0243270:CDS 35.0%
!! TTCTAAAATACCCAAAGGCT+TGG - chr2_2:20156694-20156713 Msa0243270:intron 35.0%
CACAACCTGCTTAAATATAC+TGG + chr2_2:20156729-20156748 None:intergenic 35.0%
ATTTCTCCTTTCATTCCTGA+TGG - chr2_2:20156809-20156828 Msa0243270:CDS 35.0%
!! TTGTCCTTATTTCTGGTTGA+GGG - chr2_2:20156948-20156967 Msa0243270:intron 35.0%
TAACACAAATTTGAACAGGC+GGG + chr2_2:20157033-20157052 None:intergenic 35.0%
GTAACACAAATTTGAACAGG+CGG + chr2_2:20157034-20157053 None:intergenic 35.0%
GTAAATAAGTCAAACTCGTG+TGG + chr2_2:20157295-20157314 None:intergenic 35.0%
TTTACACAGAGTCTTCAGAT+AGG + chr2_2:20157317-20157336 None:intergenic 35.0%
TCTGAAGACTCTGTGTAAAT+TGG - chr2_2:20157318-20157337 Msa0243270:CDS 35.0%
ATTGTATAAGACGAGATCTC+AGG + chr2_2:20157614-20157633 None:intergenic 35.0%
TATACAATCCCAGAAGTTAC+TGG - chr2_2:20157626-20157645 Msa0243270:intron 35.0%
TAAACTGAATGATGCTAGCT+TGG + chr2_2:20157769-20157788 None:intergenic 35.0%
ACAAAATCAAACGGAAGAGT+GGG + chr2_2:20157872-20157891 None:intergenic 35.0%
CCAATCTCAGTTTCCATAAA+TGG + chr2_2:20158048-20158067 None:intergenic 35.0%
CCATTTATGGAAACTGAGAT+TGG - chr2_2:20158045-20158064 Msa0243270:intron 35.0%
TGTGGAATAGAGTATGATTC+TGG + chr2_2:20158146-20158165 None:intergenic 35.0%
GAATCATACTCTATTCCACA+AGG - chr2_2:20158146-20158165 Msa0243270:intron 35.0%
!! AACTAACGGGTTTATAAGCA+AGG + chr2_2:20158677-20158696 None:intergenic 35.0%
GCGATGGTATATTGAGAAAA+TGG - chr2_2:20158882-20158901 Msa0243270:intron 35.0%
GTTCTGTTAATATAAGGTCC+AGG - chr2_2:20159071-20159090 Msa0243270:intron 35.0%
CAAAAGCTTCACTTCAATGA+TGG + chr2_2:20159228-20159247 None:intergenic 35.0%
! TCATTGAAGTGAAGCTTTTG+TGG - chr2_2:20159228-20159247 Msa0243270:intron 35.0%
AGTGAGTTCCATTAGGAAAA+CGG + chr2_2:20159280-20159299 None:intergenic 35.0%
AAATTGAAGCAACAATGTGG+TGG - chr2_2:20159415-20159434 Msa0243270:intron 35.0%
TACTTCAAAGATGGAAGGAA+TGG - chr2_2:20159444-20159463 Msa0243270:intron 35.0%
!! GTCTTTTCAAGACTTTGTGA+TGG - chr2_2:20159470-20159489 Msa0243270:intron 35.0%
AATAATCCTAATGTAGACCC+CGG - chr2_2:20159623-20159642 Msa0243270:intron 35.0%
AGTAACTGTCAAGTCAATTC+CGG + chr2_2:20159645-20159664 None:intergenic 35.0%
CTAAGCACAGAAAACTTACT+TGG - chr2_2:20159877-20159896 Msa0243270:intron 35.0%
! ACAATCAGTTCCATGGTTTT+TGG + chr2_2:20159945-20159964 None:intergenic 35.0%
AAAAGCAAAACACAACATCC+GGG + chr2_2:20160087-20160106 None:intergenic 35.0%
AGAATAACTCAGTCTATCTG+AGG + chr2_2:20160141-20160160 None:intergenic 35.0%
TATGAGTCAGTCTAACTCAA+GGG + chr2_2:20160410-20160429 None:intergenic 35.0%
TTATGAGTCAGTCTAACTCA+AGG + chr2_2:20160411-20160430 None:intergenic 35.0%
!!! ACTTTTTTCTTCTCATCCAC+AGG + chr2_2:20160458-20160477 None:intergenic 35.0%
AGTTATTGAGGATGTTGACA+AGG - chr2_2:20160475-20160494 Msa0243270:exon 35.0%
CTTCATAATACGCACAATTG+AGG + chr2_2:20160522-20160541 None:intergenic 35.0%
TTGTGCGTATTATGAAGAGT+CGG - chr2_2:20160525-20160544 Msa0243270:intron 35.0%
TTCTTAATTGCCTTGACATC+AGG + chr2_2:20160703-20160722 None:intergenic 35.0%
ATGTCAAGGCAATTAAGAAG+CGG - chr2_2:20160704-20160723 Msa0243270:intron 35.0%
CATTATCTTTGTCTCTTTCC+AGG + chr2_2:20160756-20160775 None:intergenic 35.0%
ATAGCAAAACAAGATGAGGA+TGG - chr2_2:20160842-20160861 Msa0243270:intron 35.0%
GTTACTCTCAATTTCCTTGA+AGG - chr2_2:20160887-20160906 Msa0243270:intron 35.0%
TATAATCAAGTAGGCCTAGA+TGG - chr2_2:20161006-20161025 Msa0243270:intron 35.0%
!! CAAAAAGGAAAGTACCATCT+AGG + chr2_2:20161023-20161042 None:intergenic 35.0%
! CTAGATGGTACTTTCCTTTT+TGG - chr2_2:20161021-20161040 Msa0243270:intron 35.0%
CGCAATTCCTATTTCCAATA+TGG + chr2_2:20161114-20161133 None:intergenic 35.0%
AACCATAAAATGAGTGGGTA+TGG - chr2_2:20161178-20161197 Msa0243270:five_prime_UTR 35.0%
CTTCACCGAAACCTTTATCA+GGG - chr2_2:20152195-20152214 Msa0243270:three_prime_UTR 40.0%
GCACGATTCTTTACCGAAAA+AGG - chr2_2:20152239-20152258 Msa0243270:three_prime_UTR 40.0%
!! GATTTAGTTTGGGGGGATTA+GGG - chr2_2:20152474-20152493 Msa0243270:three_prime_UTR 40.0%
TAGGAACAATTAGGGTTTGG+GGG - chr2_2:20152639-20152658 Msa0243270:intron 40.0%
!! AGAGTTTGCTGTTAAGGCTA+GGG - chr2_2:20152836-20152855 Msa0243270:CDS 40.0%
AGGGATTATCGATGAGTGAA+CGG - chr2_2:20152855-20152874 Msa0243270:CDS 40.0%
! AGGATGGGATTTTATGCTGA+AGG - chr2_2:20152898-20152917 Msa0243270:intron 40.0%
! GGATGGGATTTTATGCTGAA+GGG - chr2_2:20152899-20152918 Msa0243270:intron 40.0%
GTACTTATCATACAGCGGTT+GGG + chr2_2:20153138-20153157 None:intergenic 40.0%
TGTACTTATCATACAGCGGT+TGG + chr2_2:20153139-20153158 None:intergenic 40.0%
AACCGCTGTATGATAAGTAC+AGG - chr2_2:20153138-20153157 Msa0243270:CDS 40.0%
ACCGCTGTATGATAAGTACA+GGG - chr2_2:20153139-20153158 Msa0243270:CDS 40.0%
TCCCTGTACTTATCATACAG+CGG + chr2_2:20153143-20153162 None:intergenic 40.0%
TGGATCAAAGGACACCATTA+CGG + chr2_2:20153288-20153307 None:intergenic 40.0%
!! CTTTATAGGGCTATTGGCTT+AGG - chr2_2:20153469-20153488 Msa0243270:CDS 40.0%
CCCAAATGTTACATGGTGTA+TGG + chr2_2:20153868-20153887 None:intergenic 40.0%
CTCAGATCTTGTCTATGGTT+TGG + chr2_2:20153910-20153929 None:intergenic 40.0%
GTACACTCAGATCTTGTCTA+TGG + chr2_2:20153915-20153934 None:intergenic 40.0%
GGACTGATTGAGAAAGTAGT+TGG + chr2_2:20153949-20153968 None:intergenic 40.0%
!! CAAAGGTATTTAGTGGGTGT+TGG + chr2_2:20154013-20154032 None:intergenic 40.0%
CAACACCCACTAAATACCTT+TGG - chr2_2:20154011-20154030 Msa0243270:intron 40.0%
!! CCAATCCCAAAGGTATTTAG+TGG + chr2_2:20154020-20154039 None:intergenic 40.0%
!! CCACTAAATACCTTTGGGAT+TGG - chr2_2:20154017-20154036 Msa0243270:intron 40.0%
!! GAGATCAGTTTTGTCAATCG+TGG - chr2_2:20154047-20154066 Msa0243270:intron 40.0%
TCGTGGATAGCTGAAAATAG+TGG - chr2_2:20154064-20154083 Msa0243270:intron 40.0%
CGTGGATAGCTGAAAATAGT+GGG - chr2_2:20154065-20154084 Msa0243270:intron 40.0%
TTGTCAAATAGCGGCTATAG+TGG + chr2_2:20154126-20154145 None:intergenic 40.0%
GACAAACCACTATTGTTCCA+CGG + chr2_2:20154170-20154189 None:intergenic 40.0%
GCCATTAACAATATCTGGTG+AGG - chr2_2:20154210-20154229 Msa0243270:intron 40.0%
GGGCGTGTGGAAAAATTATT+GGG - chr2_2:20154255-20154274 Msa0243270:intron 40.0%
! CACGGGATTATTTCTCAATC+TGG - chr2_2:20154294-20154313 Msa0243270:intron 40.0%
ACAGAGAAACTAAGGGAAAG+GGG + chr2_2:20154511-20154530 None:intergenic 40.0%
! GTTTCTCTGTTTCTTGCATG+TGG - chr2_2:20154521-20154540 Msa0243270:intron 40.0%
GGAATCAAAATGATCAGCCA+AGG - chr2_2:20154900-20154919 Msa0243270:intron 40.0%
CTATAGAGTAAAGACAGCCT+TGG + chr2_2:20154920-20154939 None:intergenic 40.0%
GACTGATCTGTGTCTCTTAA+AGG - chr2_2:20155218-20155237 Msa0243270:CDS 40.0%
!! GATTTATTTTTCTTGGGGGG+TGG - chr2_2:20155337-20155356 Msa0243270:intron 40.0%
TTATGTTGCGAGAACTTGTG+AGG - chr2_2:20155571-20155590 Msa0243270:intron 40.0%
! GTGGGCTAACCATAAAATCA+TGG - chr2_2:20155596-20155615 Msa0243270:intron 40.0%
ATCGATACTTTATTGCTCGG+AGG - chr2_2:20155652-20155671 Msa0243270:intron 40.0%
TTCCTCCGCTTAATGAAGTT+GGG - chr2_2:20155679-20155698 Msa0243270:intron 40.0%
ATTCTCGAAAGGCTTCAAAC+TGG - chr2_2:20156105-20156124 Msa0243270:intron 40.0%
! CTCAAGGTATTATTCCTTCG+TGG - chr2_2:20156158-20156177 Msa0243270:intron 40.0%
TGGAAATGAAGAAACCACGA+AGG + chr2_2:20156175-20156194 None:intergenic 40.0%
ATTGTGGCATTCATTACAGG+CGG - chr2_2:20156218-20156237 Msa0243270:intron 40.0%
CTTGAAACGGGAGAAAGATA+GGG - chr2_2:20156248-20156267 Msa0243270:intron 40.0%
!! CTTAGGTTGAAGACTTGTCA+AGG - chr2_2:20156657-20156676 Msa0243270:CDS 40.0%
GACAAACCATCAGGAATGAA+AGG + chr2_2:20156818-20156837 None:intergenic 40.0%
CATCACATAGACAAACCATC+AGG + chr2_2:20156827-20156846 None:intergenic 40.0%
TTCGGTAACATGCTGCATAT+AGG + chr2_2:20156858-20156877 None:intergenic 40.0%
AGATGCAGCAAGTAACAAGA+AGG - chr2_2:20156907-20156926 Msa0243270:intron 40.0%
!! GTTGTCCTTATTTCTGGTTG+AGG - chr2_2:20156947-20156966 Msa0243270:intron 40.0%
!! TGTCCTTATTTCTGGTTGAG+GGG - chr2_2:20156949-20156968 Msa0243270:intron 40.0%
TAACCCCTCAACCAGAAATA+AGG + chr2_2:20156955-20156974 None:intergenic 40.0%
TAACGTGCTACATGACATGA+TGG - chr2_2:20157354-20157373 Msa0243270:CDS 40.0%
!! GACATGATGGACAAACAATC+TGG - chr2_2:20157367-20157386 Msa0243270:CDS 40.0%
GTCTTTGTCCAGTAACTTCT+GGG + chr2_2:20157637-20157656 None:intergenic 40.0%
TGTCTTTGTCCAGTAACTTC+TGG + chr2_2:20157638-20157657 None:intergenic 40.0%
GATAACTACTAGTCCATCGT+TGG + chr2_2:20157678-20157697 None:intergenic 40.0%
GATTTGGACAATACAGAAGG+AGG + chr2_2:20157741-20157760 None:intergenic 40.0%
! TGCTAGCTTGGCATAAGATT+TGG + chr2_2:20157757-20157776 None:intergenic 40.0%
CACAAAATCAAACGGAAGAG+TGG + chr2_2:20157873-20157892 None:intergenic 40.0%
! CCAACAATATCCCTTTTCTC+CGG + chr2_2:20157962-20157981 None:intergenic 40.0%
CGGAGAAAAGGGATATTGTT+GGG - chr2_2:20157960-20157979 Msa0243270:intron 40.0%
TATTGTTGGGTTACAAGAGC+AGG - chr2_2:20157973-20157992 Msa0243270:intron 40.0%
!! TGAGATTGGTCTCTTTCTTC+AGG - chr2_2:20158059-20158078 Msa0243270:intron 40.0%
TATCCTATAGGCTCTTAAGG+AGG - chr2_2:20158230-20158249 Msa0243270:intron 40.0%
ACAAAAAGTGGCAAGCAGTT+CGG + chr2_2:20158301-20158320 None:intergenic 40.0%
TAGAATGTGTCAGACCCAAT+TGG - chr2_2:20158566-20158585 Msa0243270:intron 40.0%
GACTTTAGTGGTCTAAGCTT+GGG - chr2_2:20158607-20158626 Msa0243270:intron 40.0%
ACTTTAGTGGTCTAAGCTTG+GGG - chr2_2:20158608-20158627 Msa0243270:intron 40.0%
!! TAACGGGTTTATAAGCAAGG+TGG + chr2_2:20158674-20158693 None:intergenic 40.0%
TGAAAAAAAGATCTTGGGGG+AGG + chr2_2:20158737-20158756 None:intergenic 40.0%
! TTTTCTTCCACGCATGTTAC+TGG - chr2_2:20158788-20158807 Msa0243270:intron 40.0%
CCAAAAAGGACAAAGCCAAA+GGG + chr2_2:20159107-20159126 None:intergenic 40.0%
!!! CCTTTGGCTTTGTCCTTTTT+GGG - chr2_2:20159105-20159124 Msa0243270:intron 40.0%
!!! GCTTTGTCCTTTTTGGGTTT+CGG - chr2_2:20159111-20159130 Msa0243270:intron 40.0%
TGAGTTCCATTAGGAAAACG+GGG + chr2_2:20159278-20159297 None:intergenic 40.0%
GTGAGTTCCATTAGGAAAAC+GGG + chr2_2:20159279-20159298 None:intergenic 40.0%
TCAGGTTACAGATTTGACAC+TGG - chr2_2:20159562-20159581 Msa0243270:intron 40.0%
TACAGATTTGACACTGGCAA+AGG - chr2_2:20159568-20159587 Msa0243270:intron 40.0%
TAACTGTCAAGTCAATTCCG+GGG + chr2_2:20159643-20159662 None:intergenic 40.0%
GTAACTGTCAAGTCAATTCC+GGG + chr2_2:20159644-20159663 None:intergenic 40.0%
ACTTATATTGCAGGTACCCA+AGG + chr2_2:20159910-20159929 None:intergenic 40.0%
TTGGGTACCTGCAATATAAG+TGG - chr2_2:20159909-20159928 Msa0243270:intron 40.0%
TGGGTACCTGCAATATAAGT+GGG - chr2_2:20159910-20159929 Msa0243270:intron 40.0%
AGTAGTCACAATCAGTTCCA+TGG + chr2_2:20159952-20159971 None:intergenic 40.0%
ACTGATTGTGACTACTTACC+AGG - chr2_2:20159956-20159975 Msa0243270:intron 40.0%
CTTGTACTTGGCACATGATA+AGG + chr2_2:20160219-20160238 None:intergenic 40.0%
GGTAATATTGCTTTCGTGCT+TGG + chr2_2:20160257-20160276 None:intergenic 40.0%
AGACAAAATGAGGAGGATCA+AGG - chr2_2:20160310-20160329 Msa0243270:intron 40.0%
! TTTTTCTTCTCATCCACAGG+AGG + chr2_2:20160455-20160474 None:intergenic 40.0%
GCAGATAGCAAAACAAGATG+AGG - chr2_2:20160838-20160857 Msa0243270:intron 40.0%
CTCTCAATTTCCTTGAAGGA+AGG - chr2_2:20160891-20160910 Msa0243270:intron 40.0%
ACTTATAGCTCCTTCCTTCA+AGG + chr2_2:20160904-20160923 None:intergenic 40.0%
CTGTAAATGTGTGCTCATGT+TGG - chr2_2:20160965-20160984 Msa0243270:intron 40.0%
ATGTGTGCTCATGTTGGAAA+AGG - chr2_2:20160971-20160990 Msa0243270:intron 40.0%
AAGTCATCAGATGTGAATGC+AGG + chr2_2:20161057-20161076 None:intergenic 40.0%
GGGGTGGGAGAAATAATTAA+TGG + chr2_2:20161093-20161112 None:intergenic 40.0%
! TTATTTCTCCCACCCCATAT+TGG - chr2_2:20161097-20161116 Msa0243270:five_prime_UTR 40.0%
TCCTATTTCCAATATGGGGT+GGG + chr2_2:20161108-20161127 None:intergenic 40.0%
TTCCTATTTCCAATATGGGG+TGG + chr2_2:20161109-20161128 None:intergenic 40.0%
! TGCCATACCCACTCATTTTA+TGG + chr2_2:20161183-20161202 None:intergenic 40.0%
CCTGATAAAGGTTTCGGTGA+AGG + chr2_2:20152197-20152216 None:intergenic 45.0%
CCTTCACCGAAACCTTTATC+AGG - chr2_2:20152194-20152213 Msa0243270:three_prime_UTR 45.0%
TAAAGAATCGTGCGCGATGA+TGG + chr2_2:20152232-20152251 None:intergenic 45.0%
!! TAGGGTTTAGTTTGGGGACT+AGG - chr2_2:20152337-20152356 Msa0243270:three_prime_UTR 45.0%
!! AGGGTTTAGTTTGGGGACTA+GGG - chr2_2:20152338-20152357 Msa0243270:three_prime_UTR 45.0%
CGATTTCATTCGGTAGGAGT+TGG - chr2_2:20152378-20152397 Msa0243270:three_prime_UTR 45.0%
!! GGATTTAGTTTGGGGGGATT+AGG - chr2_2:20152473-20152492 Msa0243270:three_prime_UTR 45.0%
AACAATTAGGGTTTGGGGGA+AGG - chr2_2:20152643-20152662 Msa0243270:intron 45.0%
!! GGTTGCAGAGTTTGCTGTTA+AGG - chr2_2:20152830-20152849 Msa0243270:CDS 45.0%
!! CAGAGTTTGCTGTTAAGGCT+AGG - chr2_2:20152835-20152854 Msa0243270:CDS 45.0%
!!! TGGGTTTTGTTTGAGCTCTG+AGG - chr2_2:20153036-20153055 Msa0243270:CDS 45.0%
GGTTGGGAATAGTCATTTGG+AGG + chr2_2:20153122-20153141 None:intergenic 45.0%
AGCGGTTGGGAATAGTCATT+TGG + chr2_2:20153125-20153144 None:intergenic 45.0%
GCTGTATGATAAGTACAGGG+AGG - chr2_2:20153142-20153161 Msa0243270:CDS 45.0%
!! TAAGTACAGGGAGGCATTTG+AGG - chr2_2:20153151-20153170 Msa0243270:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_2:20153320-20153339 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_2:20153321-20153340 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + chr2_2:20153322-20153341 None:intergenic 45.0%
TGGAACATTCAACCTCCACA+TGG - chr2_2:20153677-20153696 Msa0243270:CDS 45.0%
CTATGGAAGACATGAGACAC+AGG + chr2_2:20153831-20153850 None:intergenic 45.0%
!! AATACCTTTGGGATTGGACG+TGG - chr2_2:20154023-20154042 Msa0243270:intron 45.0%
TTGTACTAAATAGCGTGCCG+TGG - chr2_2:20154150-20154169 Msa0243270:intron 45.0%
GCAGCTATAGTAGCCGAATT+TGG + chr2_2:20154192-20154211 None:intergenic 45.0%
CGGGCGTGTGGAAAAATTAT+TGG - chr2_2:20154254-20154273 Msa0243270:intron 45.0%
AAATTGAAGCAGCTTGGACC+AGG - chr2_2:20154355-20154374 Msa0243270:intron 45.0%
AGCTGAAAGATCGTAACTCG+AGG + chr2_2:20154829-20154848 None:intergenic 45.0%
TCGAGTTACGATCTTTCAGC+TGG - chr2_2:20154828-20154847 Msa0243270:CDS 45.0%
! AAGGAGAGTCGGAGACTTTT+GGG + chr2_2:20154965-20154984 None:intergenic 45.0%
ACAGATTTGGGAAGGAGAGT+CGG + chr2_2:20154976-20154995 None:intergenic 45.0%
TCGTGCTTCTCTCTCAAAGA+AGG + chr2_2:20155546-20155565 None:intergenic 45.0%
CTTCCTCCGCTTAATGAAGT+TGG - chr2_2:20155678-20155697 Msa0243270:intron 45.0%
GTCAGCCCAACTTCATTAAG+CGG + chr2_2:20155687-20155706 None:intergenic 45.0%
!! TGCAGAAGTGTCTTTGAGCA+TGG + chr2_2:20156081-20156100 None:intergenic 45.0%
GCTTGAAACGGGAGAAAGAT+AGG - chr2_2:20156247-20156266 Msa0243270:intron 45.0%
TAGCGAGCCCAAGTTATTAG+AGG - chr2_2:20156293-20156312 Msa0243270:intron 45.0%
GAAACAGGATCCAAGCCTTT+GGG + chr2_2:20156707-20156726 None:intergenic 45.0%
ATGCAGCATGTTACCGAAGA+AGG - chr2_2:20156860-20156879 Msa0243270:intron 45.0%
! TACCGAAGAAGGTACAACGT+TGG - chr2_2:20156871-20156890 Msa0243270:intron 45.0%
CACCAACGTTGTACCTTCTT+CGG + chr2_2:20156876-20156895 None:intergenic 45.0%
! AGGTACAACGTTGGTGAAGT+TGG - chr2_2:20156880-20156899 Msa0243270:intron 45.0%
! GGCTTCAATGCCGATTATTG+CGG + chr2_2:20157012-20157031 None:intergenic 45.0%
TCAAACTCGTGTGGCTCAAA+TGG + chr2_2:20157286-20157305 None:intergenic 45.0%
GACTCGTTGTGCTCATCAAA+AGG - chr2_2:20157585-20157604 Msa0243270:intron 45.0%
!! TTGACTTGTTGAGCCAACGA+TGG - chr2_2:20157662-20157681 Msa0243270:CDS 45.0%
TTGGACAATACAGAAGGAGG+AGG + chr2_2:20157738-20157757 None:intergenic 45.0%
AGGTCGTACACGTTCCTTAT+CGG - chr2_2:20157799-20157818 Msa0243270:intron 45.0%
CCGGAGAAAAGGGATATTGT+TGG - chr2_2:20157959-20157978 Msa0243270:intron 45.0%
AACAGTCGTTCACATATGCC+AGG + chr2_2:20158122-20158141 None:intergenic 45.0%
AAGCCTCCTTAAGAGCCTAT+AGG + chr2_2:20158236-20158255 None:intergenic 45.0%
!!! TTTTGCAACAAGGGTGTTGC+TGG - chr2_2:20158264-20158283 Msa0243270:intron 45.0%
AATGTGTCAGACCCAATTGG+AGG - chr2_2:20158569-20158588 Msa0243270:intron 45.0%
!! GCGTGCATAATGGACTTTAG+TGG - chr2_2:20158595-20158614 Msa0243270:intron 45.0%
GGACTTTAGTGGTCTAAGCT+TGG - chr2_2:20158606-20158625 Msa0243270:intron 45.0%
CTTTAGTGGTCTAAGCTTGG+GGG - chr2_2:20158609-20158628 Msa0243270:intron 45.0%
TTTAGTGGTCTAAGCTTGGG+GGG - chr2_2:20158610-20158629 Msa0243270:intron 45.0%
AAGGTGGAGTGAAGTCCAAA+TGG + chr2_2:20158658-20158677 None:intergenic 45.0%
! CCAAAGGGATTTGGTATTCC+TGG + chr2_2:20159092-20159111 None:intergenic 45.0%
CCAGGAATACCAAATCCCTT+TGG - chr2_2:20159089-20159108 Msa0243270:intron 45.0%
AGGACAAAGCCAAAGGGATT+TGG + chr2_2:20159101-20159120 None:intergenic 45.0%
!!! CCCTTTGGCTTTGTCCTTTT+TGG - chr2_2:20159104-20159123 Msa0243270:intron 45.0%
CCCAAAAAGGACAAAGCCAA+AGG + chr2_2:20159108-20159127 None:intergenic 45.0%
GGCACGGTGAATGATACATT+TGG - chr2_2:20159199-20159218 Msa0243270:intron 45.0%
! AGTCAACCCCGTTTTCCTAA+TGG - chr2_2:20159269-20159288 Msa0243270:intron 45.0%
! CTTGCAGGAAAAAGCTTGCT+CGG - chr2_2:20159338-20159357 Msa0243270:intron 45.0%
ACTCCTCTCATGGTCATCAT+TGG + chr2_2:20159386-20159405 None:intergenic 45.0%
GGAGAACCAAACAAGCTTTG+AGG - chr2_2:20159589-20159608 Msa0243270:intron 45.0%
TCAATTCCGGGGTCTACATT+AGG + chr2_2:20159632-20159651 None:intergenic 45.0%
ACAGTTACTGTTCTGACCAC+TGG - chr2_2:20159656-20159675 Msa0243270:intron 45.0%
CCATTTCTGCAGGAAGATTG+AGG + chr2_2:20159709-20159728 None:intergenic 45.0%
CCTCAATCTTCCTGCAGAAA+TGG - chr2_2:20159706-20159725 Msa0243270:intron 45.0%
GCGTATTATGAAGAGTCGGA+AGG - chr2_2:20160529-20160548 Msa0243270:intron 45.0%
TCCCACCCCATATTGGAAAT+AGG - chr2_2:20161104-20161123 Msa0243270:five_prime_UTR 45.0%
GAATCGAAGCCTCACTTCTA+TGG - chr2_2:20161206-20161225 Msa0243270:five_prime_UTR 45.0%
!! TAATAAGAAAAAAATAAAAA+AGG + chr2_2:20152113-20152132 None:intergenic 5.0%
!! TTTGTAAAAAAAAAAAATAT+CGG - chr2_2:20154234-20154253 Msa0243270:intron 5.0%
AATTAGGGTTTGGGGGAAGG+AGG - chr2_2:20152646-20152665 Msa0243270:intron 50.0%
ATTAGGGTTTGGGGGAAGGA+GGG - chr2_2:20152647-20152666 Msa0243270:intron 50.0%
TCAGAGCTGAACTGAGGTTC+AGG + chr2_2:20152959-20152978 None:intergenic 50.0%
TGAACCTCAGTTCAGCTCTG+AGG - chr2_2:20152958-20152977 Msa0243270:intron 50.0%
TAGTCCTCAGAGCTGAACTG+AGG + chr2_2:20152965-20152984 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_2:20153316-20153335 None:intergenic 50.0%
! TGTGGTTAGTTGTGTGGCTG+CGG + chr2_2:20153754-20153773 None:intergenic 50.0%
GAAGACATGAGACACAGGTC+TGG + chr2_2:20153826-20153845 None:intergenic 50.0%
CACAACTCGCAACAGACAAG+TGG + chr2_2:20153970-20153989 None:intergenic 50.0%
!! GGATCGTGAGTTGGTTTGCA+CGG - chr2_2:20154276-20154295 Msa0243270:intron 50.0%
!! GATCGTGAGTTGGTTTGCAC+GGG - chr2_2:20154277-20154296 Msa0243270:intron 50.0%
GTAACTCGAGGATCATAGCG+TGG + chr2_2:20154817-20154836 None:intergenic 50.0%
! GAAGGAGAGTCGGAGACTTT+TGG + chr2_2:20154966-20154985 None:intergenic 50.0%
! ATTTTTCTTGGGGGGTGGAG+TGG - chr2_2:20155342-20155361 Msa0243270:intron 50.0%
!! GAGTGGTAAGAGGTGTCATG+TGG - chr2_2:20155359-20155378 Msa0243270:intron 50.0%
TGTTGCGAGAACTTGTGAGG+AGG - chr2_2:20155574-20155593 Msa0243270:intron 50.0%
AGCCCAACTTCATTAAGCGG+AGG + chr2_2:20155684-20155703 None:intergenic 50.0%
!! GCTGACTTGCTTTCGCGATT+TGG - chr2_2:20155701-20155720 Msa0243270:intron 50.0%
GGAGATTGGAATGGGGCATA+TGG - chr2_2:20156028-20156047 Msa0243270:intron 50.0%
GGAAACAGGATCCAAGCCTT+TGG + chr2_2:20156708-20156727 None:intergenic 50.0%
AATACAGAAGGAGGAGGAGG+AGG + chr2_2:20157732-20157751 None:intergenic 50.0%
GACAATACAGAAGGAGGAGG+AGG + chr2_2:20157735-20157754 None:intergenic 50.0%
AATGTCTGCAGCCGGAGAAA+AGG - chr2_2:20157948-20157967 Msa0243270:intron 50.0%
ATGTCTGCAGCCGGAGAAAA+GGG - chr2_2:20157949-20157968 Msa0243270:intron 50.0%
TGAGCTGCATGACAAGTACC+TGG - chr2_2:20158101-20158120 Msa0243270:intron 50.0%
ATGCACGCACACCTCCAATT+GGG + chr2_2:20158583-20158602 None:intergenic 50.0%
TATGCACGCACACCTCCAAT+TGG + chr2_2:20158584-20158603 None:intergenic 50.0%
! TTGGAGGTGTGCGTGCATAA+TGG - chr2_2:20158585-20158604 Msa0243270:intron 50.0%
CGACTTTCCAGTAACATGCG+TGG + chr2_2:20158798-20158817 None:intergenic 50.0%
!! GCTTTTTCCTGCAAGCAACC+AGG + chr2_2:20159333-20159352 None:intergenic 50.0%
GTGCCAATGATGACCATGAG+AGG - chr2_2:20159380-20159399 Msa0243270:intron 50.0%
!! CTGTTCTGACCACTGGTTTC+TGG - chr2_2:20159663-20159682 Msa0243270:intron 50.0%
GTAACTAGGCCAGAAACCAG+TGG + chr2_2:20159675-20159694 None:intergenic 50.0%
TTCTCATCCACAGGAGGAAG+AGG + chr2_2:20160449-20160468 None:intergenic 50.0%
CGCACTCCATCACTAACTGT+TGG + chr2_2:20160565-20160584 None:intergenic 50.0%
ATGGAGTGCGTTGAGCAGTT+AGG - chr2_2:20160575-20160594 Msa0243270:intron 50.0%
GCAGTTAGGCCGCATGTTTA+AGG - chr2_2:20160589-20160608 Msa0243270:intron 50.0%
CTTGATCTCTCGAGACTACC+TGG - chr2_2:20160735-20160754 Msa0243270:intron 50.0%
!! CTCCATATCCAAGTATCGGC+TGG - chr2_2:20160939-20160958 Msa0243270:intron 50.0%
AGCCAGCCGATACTTGGATA+TGG + chr2_2:20160944-20160963 None:intergenic 50.0%
TACAGTAGCCAGCCGATACT+TGG + chr2_2:20160950-20160969 None:intergenic 50.0%
GGGTCGGCTACATGGATCAA+AGG + chr2_2:20153300-20153319 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2_2:20153308-20153327 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_2:20153307-20153326 Msa0243270:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_2:20153308-20153327 Msa0243270:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_2:20153314-20153333 Msa0243270:intron 55.0%
CTCACCACGTCCAATCCCAA+AGG + chr2_2:20154030-20154049 None:intergenic 55.0%
AGCGTGCCGTGGAACAATAG+TGG - chr2_2:20154161-20154180 Msa0243270:intron 55.0%
TGCGAGAACTTGTGAGGAGG+TGG - chr2_2:20155577-20155596 Msa0243270:intron 55.0%
GCGAGAACTTGTGAGGAGGT+GGG - chr2_2:20155578-20155597 Msa0243270:intron 55.0%
GTGGCATTCATTACAGGCGG+AGG - chr2_2:20156221-20156240 Msa0243270:intron 55.0%
!! AGGCGGAGGAGTGCTTGAAA+CGG - chr2_2:20156235-20156254 Msa0243270:intron 55.0%
GTCTAAGCTTGGGGGGTTCA+TGG - chr2_2:20158617-20158636 Msa0243270:intron 55.0%
CATCTTGCCTGGTTGCTTGC+AGG - chr2_2:20159323-20159342 Msa0243270:intron 55.0%
! GCAGGAAAAAGCTTGCTCGG+AGG - chr2_2:20159341-20159360 Msa0243270:intron 55.0%
GCAGATTCCTCTTCCTCCTG+TGG - chr2_2:20160439-20160458 Msa0243270:CDS 55.0%
GTTTGCGCAGCCTGATGTCA+AGG - chr2_2:20160690-20160709 Msa0243270:intron 55.0%
CGCAACGCACCATAGAAGTG+AGG + chr2_2:20161218-20161237 None:intergenic 55.0%
TTGGGGGGTGGAGTGGTAAG+AGG - chr2_2:20155349-20155368 Msa0243270:intron 60.0%
!! GGCGGAGGAGTGCTTGAAAC+GGG - chr2_2:20156236-20156255 Msa0243270:intron 60.0%
TGGGCTCGCTACTAGAGTGC+AGG + chr2_2:20156284-20156303 None:intergenic 60.0%
ACAGAAGGAGGAGGAGGAGG+AGG + chr2_2:20157729-20157748 None:intergenic 60.0%
TCGCAGTTGCTGCCGGAGGA+GGG + chr2_2:20154484-20154503 None:intergenic 65.0%
AGGAGGAGGAGGAGGAGGAG+GGG + chr2_2:20157721-20157740 None:intergenic 65.0%
GAGGAGGAGGAGGAGGAGGA+GGG + chr2_2:20157722-20157741 None:intergenic 65.0%
GAAGGAGGAGGAGGAGGAGG+AGG + chr2_2:20157726-20157745 None:intergenic 65.0%
!! TCGCAGTCGCGCTGGCTGAG+AGG + chr2_2:20154447-20154466 None:intergenic 70.0%
CCACCTCTCACGCCCTCCTC+CGG - chr2_2:20154469-20154488 Msa0243270:intron 70.0%
GTCGCAGTTGCTGCCGGAGG+AGG + chr2_2:20154485-20154504 None:intergenic 70.0%
AGCGTCGCAGTTGCTGCCGG+AGG + chr2_2:20154488-20154507 None:intergenic 70.0%
!! GGGAGCGTCGCAGTTGCTGC+CGG + chr2_2:20154491-20154510 None:intergenic 70.0%
AGGAGGAGGAGGAGGAGGGG+GGG + chr2_2:20157718-20157737 None:intergenic 70.0%
GAGGAGGAGGAGGAGGAGGG+GGG + chr2_2:20157719-20157738 None:intergenic 70.0%
GGAGGAGGAGGAGGAGGAGG+GGG + chr2_2:20157720-20157739 None:intergenic 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr2_2:20157720-20157739 None:intergenic 70.0%
AGGTGGCGTCGCAGTCGCGC+TGG + chr2_2:20154455-20154474 None:intergenic 75.0%
! CCGGAGGAGGGCGTGAGAGG+TGG + chr2_2:20154472-20154491 None:intergenic 75.0%
! CTGCCGGAGGAGGGCGTGAG+AGG + chr2_2:20154475-20154494 None:intergenic 75.0%
AGGAGGAGGAGGAGGGGGGG+GGG + chr2_2:20157715-20157734 None:intergenic 75.0%
GAGGAGGAGGAGGAGGGGGG+GGG + chr2_2:20157716-20157735 None:intergenic 75.0%
GGAGGAGGAGGAGGAGGGGG+GGG + chr2_2:20157717-20157736 None:intergenic 75.0%
! AGGAGGAGGAGGGGGGGGGG+GGG + chr2_2:20157712-20157731 None:intergenic 80.0%
! GAGGAGGAGGAGGGGGGGGG+GGG + chr2_2:20157713-20157732 None:intergenic 80.0%
! GGAGGAGGAGGAGGGGGGGG+GGG + chr2_2:20157714-20157733 None:intergenic 80.0%
! AGGAGGAGGGGGGGGGGGGG+GGG + chr2_2:20157709-20157728 None:intergenic 85.0%
! GAGGAGGAGGGGGGGGGGGG+GGG + chr2_2:20157710-20157729 None:intergenic 85.0%
! GGAGGAGGAGGGGGGGGGGG+GGG + chr2_2:20157711-20157730 None:intergenic 85.0%
! AGGAGGGGGGGGGGGGGGGG+GGG + chr2_2:20157706-20157725 None:intergenic 90.0%
! GAGGAGGGGGGGGGGGGGGG+GGG + chr2_2:20157707-20157726 None:intergenic 90.0%
! GGAGGAGGGGGGGGGGGGGG+GGG + chr2_2:20157708-20157727 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr2_2:20157703-20157722 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr2_2:20157704-20157723 None:intergenic 95.0%
! GGAGGGGGGGGGGGGGGGGG+GGG + chr2_2:20157705-20157724 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 20152069 20161285 20152069 ID=Msa0243270;Name=Msa0243270
chr2_2 mRNA 20152069 20161285 20152069 ID=Msa0243270-mRNA-1;Parent=Msa0243270;Name=Msa0243270-mRNA-1;_AED=0.12;_eAED=0.12;_QI=221|1|1|1|0.94|0.9|20|484|742
chr2_2 exon 20152069 20152654 20152069 ID=Msa0243270-mRNA-1:exon:8151;Parent=Msa0243270-mRNA-1
chr2_2 exon 20152744 20152911 20152744 ID=Msa0243270-mRNA-1:exon:8150;Parent=Msa0243270-mRNA-1
chr2_2 exon 20153023 20153241 20153023 ID=Msa0243270-mRNA-1:exon:8149;Parent=Msa0243270-mRNA-1
chr2_2 exon 20153377 20153520 20153377 ID=Msa0243270-mRNA-1:exon:8148;Parent=Msa0243270-mRNA-1
chr2_2 exon 20153627 20153788 20153627 ID=Msa0243270-mRNA-1:exon:8147;Parent=Msa0243270-mRNA-1
chr2_2 exon 20153889 20154009 20153889 ID=Msa0243270-mRNA-1:exon:8146;Parent=Msa0243270-mRNA-1
chr2_2 exon 20154821 20154876 20154821 ID=Msa0243270-mRNA-1:exon:8145;Parent=Msa0243270-mRNA-1
chr2_2 exon 20154965 20155114 20154965 ID=Msa0243270-mRNA-1:exon:8144;Parent=Msa0243270-mRNA-1
chr2_2 exon 20155187 20155273 20155187 ID=Msa0243270-mRNA-1:exon:8143;Parent=Msa0243270-mRNA-1
chr2_2 exon 20155360 20155395 20155360 ID=Msa0243270-mRNA-1:exon:8142;Parent=Msa0243270-mRNA-1
chr2_2 exon 20156426 20156488 20156426 ID=Msa0243270-mRNA-1:exon:8141;Parent=Msa0243270-mRNA-1
chr2_2 exon 20156612 20156692 20156612 ID=Msa0243270-mRNA-1:exon:8140;Parent=Msa0243270-mRNA-1
chr2_2 exon 20156780 20156869 20156780 ID=Msa0243270-mRNA-1:exon:8139;Parent=Msa0243270-mRNA-1
chr2_2 exon 20157040 20157117 20157040 ID=Msa0243270-mRNA-1:exon:8138;Parent=Msa0243270-mRNA-1
chr2_2 exon 20157191 20157394 20157191 ID=Msa0243270-mRNA-1:exon:8137;Parent=Msa0243270-mRNA-1
chr2_2 exon 20157476 20157523 20157476 ID=Msa0243270-mRNA-1:exon:8136;Parent=Msa0243270-mRNA-1
chr2_2 exon 20157632 20157817 20157632 ID=Msa0243270-mRNA-1:exon:8135;Parent=Msa0243270-mRNA-1
chr2_2 exon 20160164 20160263 20160164 ID=Msa0243270-mRNA-1:exon:8134;Parent=Msa0243270-mRNA-1
chr2_2 exon 20160355 20160516 20160355 ID=Msa0243270-mRNA-1:exon:8133;Parent=Msa0243270-mRNA-1
chr2_2 exon 20161093 20161285 20161093 ID=Msa0243270-mRNA-1:exon:8132;Parent=Msa0243270-mRNA-1
chr2_2 five_prime_UTR 20161093 20161285 20161093 ID=Msa0243270-mRNA-1:five_prime_utr;Parent=Msa0243270-mRNA-1
chr2_2 five_prime_UTR 20160489 20160516 20160489 ID=Msa0243270-mRNA-1:five_prime_utr;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20160355 20160488 20160355 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20160164 20160263 20160164 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20157632 20157817 20157632 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20157476 20157523 20157476 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20157191 20157394 20157191 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20157040 20157117 20157040 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20156780 20156869 20156780 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20156612 20156692 20156612 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20156426 20156488 20156426 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20155360 20155395 20155360 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20155187 20155273 20155187 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20154965 20155114 20154965 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20154821 20154876 20154821 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20153889 20154009 20153889 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20153627 20153788 20153627 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20153377 20153520 20153377 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20153023 20153241 20153023 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20152744 20152911 20152744 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 CDS 20152553 20152654 20152553 ID=Msa0243270-mRNA-1:cds;Parent=Msa0243270-mRNA-1
chr2_2 three_prime_UTR 20152069 20152552 20152069 ID=Msa0243270-mRNA-1:three_prime_utr;Parent=Msa0243270-mRNA-1
Gene Sequence

>Msa0243270

ATGAGTGAACGGAAGACTATTGATTTAGAGCAAGGATGGGATTTTATGCTGAAGGGAATACAGAAGCTGAAGAATATTCTGGAAGGGTTACCTGAACCTCAGTTCAGCTCTGAGGACTATATGATGCTATACACAACTATATATAATATGTGTACTCAGAAGCCTCCAAATGACTATTCCCAACCGCTGTATGATAAGTACAGGGAGGCATTTGAGGAGTACATCTTATCAACTGTATTACCTTCTTTGAGAGAGAAGCACGATGAATTTATGTTGCGAGAACTTGTGAGGAGGTGGGCTAACCATAAAATCATGGTTAGATGGCTTTCTCGTTTCTTTCACTATTTGGATCGATACTTTATTGCTCGGAGGTCACTTCCTCCGCTTAATGAAGTTGGGCTGACTTGCTTTCGCGATTTGGTTTACAAGGAAGTAAATGGGAAAGTGAGAGATGCCGTGATTTCTCTTATTGATCAAGAACGTGAAGGAGAGCAGATCGATCGAGCTCTGATAAAAAATGTATTAGATATATTTGTGGAGATTGGAATGGGGCATATGGATCACTATGAAAATGATTTTGAAACTGCCATGCTCAAAGACACTTCTGCATATTATTCTCGAAAGGCTTCAAACTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGCGGAGGAGTGCTTGAAACGGGAGAAAGATAGGGTTGCTAATTACCTGCACTCTAGTAGCGAGCCCAAGTTATTAGAGAAAGTTCAACATGAGCTTTTATCTGTGTATGCAAACCAACTTCTTGAAAAAGAACATTCTGGATGTCATGCATTACTTAGAGATGACAAGGTTGAAGACTTGTCAAGGATGTTCAGACTCTTTTCTAAAATACCCAAAGGCTTGGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACCGAAGAAGGTACAACGTTGGTGAAGTTGGCTGAAGATGCAGCAAGTAACAAGAAGCCGGAGAAAAGGGATATTGTTGGGTTACAAGAGCAGGTTTTTGTTCGAAAAGTGATTGAGCTGCATGACAAGTACCTGGCATATGTGAACGACTGTTTCCAGAATCATACTCTATTCCACAAGGCTCTTAAGGAGGCTTTTGAGATATTTTGCAACAAGGGTGTTGCTGGAAGCTCAAGTGCCGAACTGCTTGCCACTTTTTGTGATAATATTCTCAAGAAAGGCGGAAGTGAAAAATTGAGTGATGAAGCAATTGAAGAAACACTTGAGAAGGTTGTCAAGCTACTTGCTTATATAAGTGACAAAGATTTGTTTGCCGAATTTTATAGGAAAAAGCTTGCTCGGAGGCTTCTTTTTGATAAGAGTGCCAATGATGACCATGAGAGGAGTATTTTAACAAAATTGAAGCAACAATGTGGTGGTCAATTTACTTCAAAGATGGAAGGAATGGTTACAGATTTGACACTGGCAAAGGAGAACCAAACAAGCTTTGAGGAATATTTAAAAAATAATCCTAATGTAGACCCCGGAATTGACTTGACAGTTACTGTTCTGACCACTGGTTTCTGGCCTAGTTACAAATCTTTTGACCTCAATCTTCCTGCAGAAATGGTTAAGTGTGTAGAAGTTTTCAAGGAGTTTTATCAAACTAAAACTAAGCACAGAAAACTTACTTGGATTTATTCCTTGGGTACCTGCAATATAAGTGGGAAATTTGAACCAAAAACCATGGAACTGATTGTGACTACTTACCAGGCTTCAGCATTGCTTCTTTTCAATTCCTCAGATAGACTGAGTTATTCTGAGATAATGGCTCAGTTGAACTTAAACGATGATGATGTTATTAGACTTCTTCACTCCTTATCATGTGCCAAGTACAAGATTCTTAACAAGGAACCAAGCACGAAAGCAATATTACCTACCGATTATTTTGAATTTAATTCAAAATTTACAGACAAAATGAGGAGGATCAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAAAAAGTTATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGGAGTGCGTTGAGCAGTTAGGCCGCATGTTTAAGCCTGATGTCAAGGCAATTAAGAAGCGGATTGAAGACTTGATCTCTCGAGACTACCTGGAAAGAGACAAAGATAATGCAAATTTGTTCAAGTACTTGGCTTGA

Protein sequence

>Msa0243270

MSERKTIDLEQGWDFMLKGIQKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPNDYSQPLYDKYREAFEEYILSTVLPSLREKHDEFMLRELVRRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKEVNGKVRDAVISLIDQEREGEQIDRALIKNVLDIFVEIGMGHMDHYENDFETAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVANYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPKGLDPVSSIFKQHVTEEGTTLVKLAEDAASNKKPEKRDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLKNNPNVDPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMAQLNLNDDDVIRLLHSLSCAKYKILNKEPSTKAILPTDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLNYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFKYLA*