AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0281660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281660 MtrunA17_Chr2g0296381 99.596 742 3 0 1 742 1 742 0.0 1527
Msa0281660 MtrunA17_Chr4g0067011 93.396 742 49 0 1 742 3 744 0.0 1443
Msa0281660 MtrunA17_Chr7g0268881 85.347 389 57 0 354 742 1 389 0.0 703
Msa0281660 MtrunA17_Chr7g0268891 72.189 338 92 1 3 340 2 337 0.0 521
Msa0281660 MtrunA17_Chr8g0361901 34.225 710 428 13 43 742 51 731 4.86e-131 405
Msa0281660 MtrunA17_Chr6g0453061 33.513 743 449 14 10 742 23 730 1.14e-126 394
Msa0281660 MtrunA17_Chr5g0416711 34.153 732 439 15 23 742 32 732 1.05e-121 381
Msa0281660 MtrunA17_Chr6g0453081 32.571 743 456 15 10 742 23 730 1.05e-120 379
Msa0281660 MtrunA17_Chr1g0166181 35.455 660 396 11 92 742 101 739 4.58e-120 377
Msa0281660 MtrunA17_Chr2g0285881 33.194 720 433 14 34 742 110 792 1.62e-118 374
Msa0281660 MtrunA17_Chr1g0166131 34.493 661 401 12 92 742 102 740 6.50e-115 363
Msa0281660 MtrunA17_Chr7g0231701 32.727 660 401 11 92 742 83 708 1.47e-106 341
Msa0281660 MtrunA17_Chr1g0166141 34.983 606 366 9 144 742 90 674 5.87e-104 333
Msa0281660 MtrunA17_Chr7g0231741 40.576 382 211 7 369 742 2 375 1.20e-80 262
Msa0281660 MtrunA17_Chr4g0067071 55.500 200 89 0 7 206 5 204 2.00e-71 232
Msa0281660 MtrunA17_Chr4g0067051 54.412 204 89 2 5 206 3 204 7.08e-68 222
Msa0281660 MtrunA17_Chr4g0067031 51.770 226 101 3 2 222 6 228 1.71e-64 219
Msa0281660 MtrunA17_Chr5g0416691 36.562 413 238 10 341 742 2 401 2.85e-64 219
Msa0281660 MtrunA17_Chr7g0231791 36.010 411 243 9 341 742 2 401 3.35e-63 216
Msa0281660 MtrunA17_Chr4g0067381 52.683 205 94 1 2 206 4 205 4.87e-62 206
Msa0281660 MtrunA17_Chr5g0416831 34.557 327 167 7 423 742 3 289 4.78e-49 174
Msa0281660 MtrunA17_Chr5g0416731 26.498 434 273 11 44 443 25 446 2.18e-39 151
Msa0281660 MtrunA17_Chr7g0231721 26.765 340 227 8 48 385 29 348 2.72e-35 137
Msa0281660 MtrunA17_Chr7g0231581 26.710 307 206 6 76 380 22 311 4.09e-32 127
Msa0281660 MtrunA17_Chr5g0416901 26.710 307 206 5 76 380 46 335 6.80e-32 127
Msa0281660 MtrunA17_Chr7g0231751 27.891 294 186 7 32 305 21 308 1.60e-28 116
Msa0281660 MtrunA17_Chr7g0231571 29.464 224 152 4 76 297 22 241 5.79e-27 110
Msa0281660 MtrunA17_Chr4g0074661 58.427 89 36 1 1 89 1 88 7.82e-27 105
Msa0281660 MtrunA17_Chr5g0416911 29.018 224 153 4 76 297 30 249 8.66e-27 110
Msa0281660 MtrunA17_Chr5g0416681 26.027 219 156 2 89 304 36 251 2.61e-19 88.2
Msa0281660 MtrunA17_Chr7g0231801 26.027 219 156 2 89 304 36 251 2.98e-19 88.2
Msa0281660 MtrunA17_Chr4g0068101 51.087 92 45 0 75 166 14 105 2.92e-17 78.2
Msa0281660 MtrunA17_Chr1g0166151 24.719 178 125 5 92 267 14 184 1.78e-12 66.6
Msa0281660 MtrunA17_Chr2g0285291 76.923 39 9 0 618 656 30 68 3.27e-12 63.2
Msa0281660 MtrunA17_Chr4g0042591 28.962 183 118 4 423 596 553 732 4.92e-12 69.7
Msa0281660 MtrunA17_Chr7g0222201 26.768 198 135 3 423 611 563 759 8.20e-12 68.9
Msa0281660 MtrunA17_Chr4g0042651 27.225 191 129 3 423 604 553 742 1.41e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0281660 AT4G02570.4 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0281660 AT4G02570.2 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0281660 AT4G02570.1 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0281660 AT4G02570.3 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0281660 AT1G02980.1 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0281660 AT1G02980.2 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0281660 AT1G43140.1 65.405 740 225 3 4 742 12 721 0.0 1005
Msa0281660 AT1G59790.2 57.552 384 142 3 1 382 6 370 6.37e-153 449
Msa0281660 AT1G59790.1 57.527 372 137 3 1 370 6 358 1.72e-147 436
Msa0281660 AT1G26830.1 34.312 749 434 14 10 742 26 732 9.45e-135 416
Msa0281660 AT1G69670.1 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0281660 AT1G69670.2 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0281660 AT5G46210.1 34.123 718 423 16 37 742 113 792 6.02e-111 355
Msa0281660 AT1G59800.1 54.098 244 108 1 7 250 7 246 2.09e-88 278
Msa0281660 AT2G04660.1 27.041 196 133 2 423 611 543 735 9.25e-11 65.9

Find 180 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTCTGACCACTGGTTTC+TGG 0.082911 2_3:-17230541 Msa0281660:CDS
TTCTCGTTTCTTTCACTATT+TGG 0.108715 2_3:-17234577 Msa0281660:CDS
GCACGATTCTTTACCGAAAA+AGG 0.119181 2_3:-17237957 Msa0281660:five_prime_UTR
CGCAATTCCTATTTCCAATA+TGG 0.172526 2_3:+17229091 None:intergenic
CCTTCACCGAAACCTTTATC+AGG 0.234716 2_3:-17238002 Msa0281660:five_prime_UTR
CAGGTTTACAAGGAAGTAAA+TGG 0.245353 2_3:-17234380 Msa0281660:CDS
CATTATCTTTGTCTCTTTCC+AGG 0.286661 2_3:+17229451 None:intergenic
CACAACCTGCTTAAATATAC+TGG 0.307077 2_3:+17233483 None:intergenic
CCACACCCCATATTGGAAAT+AGG 0.309323 2_3:-17229098 Msa0281660:three_prime_UTR
GCAGTTAGGCCGCATGTTTA+AGG 0.326909 2_3:-17229615 Msa0281660:intron
TTAGATATATTTGTGGAGAT+TGG 0.327866 2_3:-17234194 Msa0281660:CDS
TGCAAATTTGTTCAAGTACT+TGG 0.329885 2_3:-17229430 Msa0281660:CDS
AATCAGGACAAGAATCTTCT+AGG 0.335743 2_3:+17234078 None:intergenic
GCTGACTTGCTTTCGCGATT+TGG 0.336069 2_3:-17234505 Msa0281660:intron
ACTTACTTGGATTTATTCCT+TGG 0.340182 2_3:-17230314 Msa0281660:CDS
TCAATTCCGGGGTCTACATT+AGG 0.343246 2_3:+17230575 None:intergenic
AATATTCCTCAAAGCTTGTT+TGG 0.345806 2_3:+17230609 None:intergenic
AAATTTCCCACTTATATTGC+AGG 0.345820 2_3:+17230288 None:intergenic
GCAATTCCTATTTCCAATAT+GGG 0.346266 2_3:+17229092 None:intergenic
GGTTGCAGAGTTTGCTGTTA+AGG 0.347092 2_3:-17237374 Msa0281660:intron
ACAGAAGCTGAAGAATATTC+TGG 0.348230 2_3:-17237279 Msa0281660:CDS
TGAATTAAATTCAAAATAAT+CGG 0.349101 2_3:+17229925 None:intergenic
TGTTGTTTACCTATAAAATT+CGG 0.355958 2_3:+17231680 None:intergenic
TTCTTAATTGCCTTGACATC+AGG 0.359018 2_3:+17229504 None:intergenic
ACTGAGTTATTCTGAGATAA+TGG 0.365223 2_3:-17230056 Msa0281660:CDS
TGTGGAATAGAGTATGATTC+TGG 0.367247 2_3:+17232058 None:intergenic
CTAAGCACAGAAAACTTACT+TGG 0.371035 2_3:-17230327 Msa0281660:CDS
ACCATAAAATCATGGTTAGA+TGG 0.374090 2_3:-17234602 Msa0281660:CDS
GGTAATATTGCTTTCGTGCT+TGG 0.374335 2_3:+17229950 None:intergenic
CCTCAATCTTCCTGCAGAAA+TGG 0.374444 2_3:-17230498 Msa0281660:intron
GCTTGAAACGGGAGAAAGAT+AGG 0.374850 2_3:-17233961 Msa0281660:CDS
CACCAACGTTGTACCTTCTT+CGG 0.375640 2_3:+17233336 None:intergenic
ACTTATAGCTCCTTCCTTCA+AGG 0.379766 2_3:+17229303 None:intergenic
ATTTCTCCCACACCCCATAT+TGG 0.381904 2_3:-17229105 Msa0281660:three_prime_UTR
GTTACTCTCAATTTCCTTGA+AGG 0.383477 2_3:-17229317 Msa0281660:three_prime_UTR
CTTCCTCCGCTTAATGAAGT+TGG 0.395619 2_3:-17234528 Msa0281660:CDS
AGCCAGCCGATACTTGGATA+TGG 0.398900 2_3:+17229263 None:intergenic
GGTGTGGGAGAAATAATTAA+TGG 0.400661 2_3:+17229114 None:intergenic
TTGCGTTACTTTAGTTTAAG+TGG 0.403889 2_3:-17229073 Msa0281660:three_prime_UTR
TTCTAAAATACCCAAAGGCT+TGG 0.406125 2_3:-17233515 Msa0281660:CDS
TGTGATAATATTCTCAAGAA+AGG 0.408911 2_3:-17231883 Msa0281660:CDS
TCAGAGCTGAACTGAGGTTC+AGG 0.411217 2_3:+17237248 None:intergenic
TACAGTAGCCAGCCGATACT+TGG 0.411984 2_3:+17229257 None:intergenic
CTTGTACTTGGCACATGATA+AGG 0.420595 2_3:+17229988 None:intergenic
TTCCTCCGCTTAATGAAGTT+GGG 0.422753 2_3:-17234527 Msa0281660:CDS
AGAAACCCTGATAAAGGTTT+CGG 0.422836 2_3:+17237996 None:intergenic
AGCGGTTGGGAATAGTCATT+TGG 0.424285 2_3:+17237082 None:intergenic
AATGTCTGCAGCCGGAGAAA+AGG 0.425273 2_3:-17232253 Msa0281660:intron
GGAGATTGGAATGGGGCATA+TGG 0.426092 2_3:-17234180 Msa0281660:CDS
CTTGTTAAGAATCTTGTACT+TGG 0.426803 2_3:+17229976 None:intergenic
TAGCGAGCCCAAGTTATTAG+AGG 0.429320 2_3:-17233915 Msa0281660:intron
AGTAACTGTCAAGTCAATTC+CGG 0.431096 2_3:+17230562 None:intergenic
TGCTTAAATATACTGGAAAC+AGG 0.431414 2_3:+17233490 None:intergenic
GGAAACAGGATCCAAGCCTT+TGG 0.432362 2_3:+17233504 None:intergenic
TAAAGAATCGTGCGCGATGA+TGG 0.434250 2_3:+17237967 None:intergenic
AGTAAGAGAAACCCTGATAA+AGG 0.435682 2_3:+17237990 None:intergenic
ATTCTCGAAAGGCTTCAAAC+TGG 0.437747 2_3:-17234103 Msa0281660:CDS
GAAACAGGATCCAAGCCTTT+GGG 0.444806 2_3:+17233505 None:intergenic
ATATTTGTGGAGATTGGAAT+GGG 0.445460 2_3:-17234188 Msa0281660:CDS
AGGTCAAAAGATTTGTAACT+AGG 0.446358 2_3:+17230518 None:intergenic
GTAACTGTCAAGTCAATTCC+GGG 0.448288 2_3:+17230563 None:intergenic
TATAATCAAGTAGGCCTAGA+TGG 0.450614 2_3:-17229198 Msa0281660:three_prime_UTR
ACAGTTACTGTTCTGACCAC+TGG 0.451735 2_3:-17230548 Msa0281660:CDS
CGGAGAAAAGGGATATTGTT+GGG 0.453652 2_3:-17232241 Msa0281660:CDS
AACCATAAAATGAGTGGGTA+TGG 0.458748 2_3:-17229024 Msa0281660:three_prime_UTR
CTTACTTGGATTTATTCCTT+GGG 0.459703 2_3:-17230313 Msa0281660:CDS
ATGTCTGCAGCCGGAGAAAA+GGG 0.463275 2_3:-17232252 Msa0281660:intron
CAGAGTTTGCTGTTAAGGCT+AGG 0.464358 2_3:-17237369 Msa0281660:five_prime_UTR
ACTCCTCTCATGGTCATCAT+TGG 0.466098 2_3:+17230821 None:intergenic
AGAATATACCTCTAATAACT+TGG 0.467807 2_3:+17233907 None:intergenic
TTCTCATCCACAGGAGGAAG+AGG 0.467931 2_3:+17229758 None:intergenic
GGCGGAGGAGTGCTTGAAAC+GGG 0.472033 2_3:-17233972 Msa0281660:CDS
CCTATTTCCAATATGGGGTG+TGG 0.474257 2_3:+17229098 None:intergenic
CTCCATATCCAAGTATCGGC+TGG 0.476819 2_3:-17229265 Msa0281660:three_prime_UTR
CCGGAGAAAAGGGATATTGT+TGG 0.478111 2_3:-17232242 Msa0281660:CDS
TGTTTCCAGTATATTTAAGC+AGG 0.481609 2_3:-17233488 Msa0281660:intron
TGGTCAATTTACTTCAAAGA+TGG 0.482034 2_3:-17230769 Msa0281660:CDS
TGGATCGATACTTTATTGCT+CGG 0.482660 2_3:-17234557 Msa0281660:CDS
TATAAATATACCATTTCTGC+AGG 0.482865 2_3:+17230488 None:intergenic
TATTGTTGGGTTACAAGAGC+AGG 0.483324 2_3:-17232228 Msa0281660:intron
AAATGTATTAGATATATTTG+TGG 0.483791 2_3:-17234201 Msa0281660:CDS
CAAAATTTACAGACAAAATG+AGG 0.486053 2_3:-17229904 Msa0281660:CDS
GATACCTTGAGCATATAATC+AGG 0.490182 2_3:+17234062 None:intergenic
CTTGATCTCTCGAGACTACC+TGG 0.495638 2_3:-17229469 Msa0281660:CDS
AACCGCTGTATGATAAGTAC+AGG 0.495768 2_3:-17237066 Msa0281660:CDS
ATGGAGTGCGTTGAGCAGTT+AGG 0.495951 2_3:-17229629 Msa0281660:CDS
CTCTCAATTTCCTTGAAGGA+AGG 0.497162 2_3:-17229313 Msa0281660:three_prime_UTR
CCATTTCTGCAGGAAGATTG+AGG 0.497896 2_3:+17230498 None:intergenic
AGAGTTTGCTGTTAAGGCTA+GGG 0.499982 2_3:-17237368 Msa0281660:five_prime_UTR
AGGTTTACAAGGAAGTAAAT+GGG 0.502271 2_3:-17234379 Msa0281660:CDS
ACTGATTGTGACTACTTACC+AGG 0.504108 2_3:-17230248 Msa0281660:intron
TTGTTAAAATACTCCTCTCA+TGG 0.505784 2_3:+17230811 None:intergenic
ATGCAGCATGTTACCGAAGA+AGG 0.506218 2_3:-17233349 Msa0281660:intron
TATATTTGTGGAGATTGGAA+TGG 0.508425 2_3:-17234189 Msa0281660:CDS
CTATTGATTTAGAGCAAGGA+TGG 0.515189 2_3:-17237322 Msa0281660:CDS
TACTTCAAAGATGGAAGGAA+TGG 0.516259 2_3:-17230760 Msa0281660:intron
AGGTACAACGTTGGTGAAGT+TGG 0.516536 2_3:-17233329 Msa0281660:CDS
TAAGTACAGGGAGGCATTTG+AGG 0.519320 2_3:-17237053 Msa0281660:CDS
TTCTGCATATTATTCTCGAA+AGG 0.520286 2_3:-17234114 Msa0281660:CDS
TGCGAGAACTTGTGAGGAGG+TGG 0.525524 2_3:-17234629 Msa0281660:CDS
GGAGAACCAAACAAGCTTTG+AGG 0.525529 2_3:-17230615 Msa0281660:CDS
TTGGGTACCTGCAATATAAG+TGG 0.526090 2_3:-17230295 Msa0281660:CDS
GGTTGGGAATAGTCATTTGG+AGG 0.527736 2_3:+17237085 None:intergenic
GTACTTATCATACAGCGGTT+GGG 0.527755 2_3:+17237069 None:intergenic
TGTACTTATCATACAGCGGT+TGG 0.527818 2_3:+17237068 None:intergenic
TTATCAATTCCAGGTTTACA+AGG 0.528929 2_3:-17234390 Msa0281660:intron
AAGACTATTGATTTAGAGCA+AGG 0.536063 2_3:-17237326 Msa0281660:CDS
CCTGATAAAGGTTTCGGTGA+AGG 0.537083 2_3:+17238002 None:intergenic
TCGTGCTTCTCTCTCAAAGA+AGG 0.537882 2_3:+17234663 None:intergenic
ATGTGTGCTCATGTTGGAAA+AGG 0.540419 2_3:-17229233 Msa0281660:three_prime_UTR
TTGTCCTGATTATATGCTCA+AGG 0.542877 2_3:-17234066 Msa0281660:intron
AGGCGGAGGAGTGCTTGAAA+CGG 0.547934 2_3:-17233973 Msa0281660:CDS
AAGTCATCAGATGTGAATGC+AGG 0.552002 2_3:+17229150 None:intergenic
AGTAGTCACAATCAGTTCCA+TGG 0.552172 2_3:+17230255 None:intergenic
CTATTTCCAATATGGGGTGT+GGG 0.554717 2_3:+17229099 None:intergenic
GCAGATTCCTCTTCCTCCTG+TGG 0.555922 2_3:-17229765 Msa0281660:intron
GAATATACCTCTAATAACTT+GGG 0.556355 2_3:+17233908 None:intergenic
AGACAAAATGAGGAGGATCA+AGG 0.560398 2_3:-17229894 Msa0281660:intron
GTGGGCTAACCATAAAATCA+TGG 0.561200 2_3:-17234610 Msa0281660:CDS
CTTCATAATACGCACAATTG+AGG 0.561336 2_3:+17229685 None:intergenic
GATCAGTTCTATAATCAAGT+AGG 0.565042 2_3:-17229207 Msa0281660:three_prime_UTR
ACTTATATTGCAGGTACCCA+AGG 0.565881 2_3:+17230297 None:intergenic
CGCACTCCATCACTAACTGT+TGG 0.568475 2_3:+17229642 None:intergenic
CTTCACCGAAACCTTTATCA+GGG 0.570432 2_3:-17238001 Msa0281660:five_prime_UTR
AACAGTCGTTCACATATGCC+AGG 0.571635 2_3:+17232082 None:intergenic
CTGTAAATGTGTGCTCATGT+TGG 0.571738 2_3:-17229239 Msa0281660:three_prime_UTR
AATTGAAGAAACACTTGAGA+AGG 0.575640 2_3:-17231833 Msa0281660:intron
CTTAGGTTGAAGACTTGTCA+AGG 0.575826 2_3:-17233552 Msa0281660:intron
TGCAGAAGTGTCTTTGAGCA+TGG 0.576831 2_3:+17234130 None:intergenic
TGGGCTCGCTACTAGAGTGC+AGG 0.577235 2_3:+17233927 None:intergenic
TACAGATTTGACACTGGCAA+AGG 0.577327 2_3:-17230636 Msa0281660:CDS
AAATTACCAACAGTTAGTGA+TGG 0.577805 2_3:-17229648 Msa0281660:CDS
TATTGATTTAGAGCAAGGAT+GGG 0.578636 2_3:-17237321 Msa0281660:CDS
AAGCTGAAGAATATTCTGGA+AGG 0.583829 2_3:-17237275 Msa0281660:CDS
CAAGTACAAGATTCTTAACA+AGG 0.590535 2_3:-17229975 Msa0281660:CDS
CAATTTACTTCAAAGATGGA+AGG 0.590929 2_3:-17230765 Msa0281660:CDS
CTTGAAACGGGAGAAAGATA+GGG 0.592854 2_3:-17233960 Msa0281660:CDS
AGAACATACAAGAGAAATCA+CGG 0.593996 2_3:+17234343 None:intergenic
CAATTCCTATTTCCAATATG+GGG 0.598728 2_3:+17229093 None:intergenic
AGGGATTATCGATGAGTGAA+CGG 0.601104 2_3:-17237349 Msa0281660:exon
TTAAATTCAAAATAATCGGT+AGG 0.601478 2_3:+17229929 None:intergenic
AGCTGAAGAATATTCTGGAA+GGG 0.602844 2_3:-17237274 Msa0281660:CDS
GTCAGCCCAACTTCATTAAG+CGG 0.606052 2_3:+17234522 None:intergenic
AAGATTGATCAAGAACGTGA+AGG 0.609119 2_3:-17234251 Msa0281660:CDS
AGATGCAGCAAGTAACAAGA+AGG 0.609700 2_3:-17233302 Msa0281660:intron
GCAGATAGCAAAACAAGATG+AGG 0.611050 2_3:-17229366 Msa0281660:three_prime_UTR
TGGGTACCTGCAATATAAGT+GGG 0.615117 2_3:-17230294 Msa0281660:CDS
AGTTATTGAGGATGTTGACA+AGG 0.621478 2_3:-17229729 Msa0281660:CDS
TTATGTTGCGAGAACTTGTG+AGG 0.624498 2_3:-17234635 Msa0281660:CDS
AATAATCCTAATGTAGACCC+CGG 0.627294 2_3:-17230581 Msa0281660:CDS
GATAATATTCTCAAGAAAGG+CGG 0.632646 2_3:-17231880 Msa0281660:CDS
TGCATTACTTAGAGATGACA+AGG 0.635739 2_3:-17233656 Msa0281660:intron
AGAATAACTCAGTCTATCTG+AGG 0.636581 2_3:+17230066 None:intergenic
ATCGATACTTTATTGCTCGG+AGG 0.640352 2_3:-17234554 Msa0281660:CDS
ACAAAATTGAAGCAACAATG+TGG 0.645513 2_3:-17230792 Msa0281660:CDS
TTGTGCGTATTATGAAGAGT+CGG 0.646014 2_3:-17229679 Msa0281660:CDS
GCGTATTATGAAGAGTCGGA+AGG 0.646046 2_3:-17229675 Msa0281660:CDS
TATCCTATAGGCTCTTAAGG+AGG 0.649623 2_3:-17231971 Msa0281660:intron
ATGTCAAGGCAATTAAGAAG+CGG 0.652248 2_3:-17229500 Msa0281660:CDS
AGCCCAACTTCATTAAGCGG+AGG 0.655556 2_3:+17234525 None:intergenic
TGAGCTGCATGACAAGTACC+TGG 0.655887 2_3:-17232100 Msa0281660:CDS
AAATATATACCTTAAACATG+CGG 0.656922 2_3:+17229606 None:intergenic
ATAGCAAAACAAGATGAGGA+TGG 0.657624 2_3:-17229362 Msa0281660:three_prime_UTR
GTTTGCGCAGCCTGATGTCA+AGG 0.659356 2_3:-17229514 Msa0281660:intron
TATTTGTGGAGATTGGAATG+GGG 0.661334 2_3:-17234187 Msa0281660:CDS
TCAGGTTACAGATTTGACAC+TGG 0.667474 2_3:-17230642 Msa0281660:intron
GCGAGAACTTGTGAGGAGGT+GGG 0.667854 2_3:-17234628 Msa0281660:CDS
GTGCCAATGATGACCATGAG+AGG 0.678765 2_3:-17230824 Msa0281660:CDS
TCCCTGTACTTATCATACAG+CGG 0.679899 2_3:+17237064 None:intergenic
AAATTGAAGCAACAATGTGG+TGG 0.685406 2_3:-17230789 Msa0281660:CDS
TGAACCTCAGTTCAGCTCTG+AGG 0.696799 2_3:-17237246 Msa0281660:CDS
TGTTGCGAGAACTTGTGAGG+AGG 0.698023 2_3:-17234632 Msa0281660:CDS
ACCGCTGTATGATAAGTACA+GGG 0.699917 2_3:-17237065 Msa0281660:CDS
TAGTCCTCAGAGCTGAACTG+AGG 0.704381 2_3:+17237242 None:intergenic
AATTTACAGACAAAATGAGG+AGG 0.707626 2_3:-17229901 Msa0281660:CDS
GTAACTAGGCCAGAAACCAG+TGG 0.710105 2_3:+17230532 None:intergenic
GAATCATACTCTATTCCACA+AGG 0.714768 2_3:-17232055 Msa0281660:intron
TACCGAAGAAGGTACAACGT+TGG 0.733065 2_3:-17233338 Msa0281660:CDS
TAACTGTCAAGTCAATTCCG+GGG 0.734741 2_3:+17230564 None:intergenic
GCTGTATGATAAGTACAGGG+AGG 0.780823 2_3:-17237062 Msa0281660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTAAAATTTTTAT+TGG - chr2_3:17229345-17229364 Msa0281660:three_prime_UTR 0.0%
!!! TTATCATTATTTTGATTTTT+TGG - chr2_3:17229654-17229673 Msa0281660:CDS 10.0%
!!! TGTTTTAGTTTTATATTAAT+TGG - chr2_3:17229945-17229964 Msa0281660:CDS 10.0%
!!! GTTTTAGTTTTATATTAATT+GGG - chr2_3:17229946-17229965 Msa0281660:CDS 10.0%
!! TGTAAAAAAAAAAAAATATC+GGG - chr2_3:17231164-17231183 Msa0281660:intron 10.0%
!! AAAAAAAAAAAAAAACACAT+TGG + chr2_3:17232724-17232743 None:intergenic 10.0%
!! TGAATTAAATTCAAAATAAT+CGG + chr2_3:17237211-17237230 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234621-17234640 None:intergenic 100.0%
!!! TTTGATTTTTTGGTTTAAAT+TGG - chr2_3:17229664-17229683 Msa0281660:CDS 15.0%
!!! TTGATTTTTTGGTTTAAATT+GGG - chr2_3:17229665-17229684 Msa0281660:CDS 15.0%
!!! TTTGTTTGTTTTGATTTTTT+TGG - chr2_3:17229693-17229712 Msa0281660:CDS 15.0%
!!! ATGTCTATTTTTTACTTTAT+TGG - chr2_3:17230383-17230402 Msa0281660:intron 15.0%
!!! TGTCTATTTTTTACTTTATT+GGG - chr2_3:17230384-17230403 Msa0281660:intron 15.0%
!! ATATATTCTTATTGTGTAAA+TGG - chr2_3:17231523-17231542 Msa0281660:intron 15.0%
!!! ATGAAATGATTTATTTTTCT+TGG - chr2_3:17232257-17232276 Msa0281660:intron 15.0%
!!! TGAAATGATTTATTTTTCTT+GGG - chr2_3:17232258-17232277 Msa0281660:intron 15.0%
!!! TTTTTTTTTTTATCAATTCC+AGG - chr2_3:17232734-17232753 Msa0281660:intron 15.0%
!! AAATGTATTAGATATATTTG+TGG - chr2_3:17232932-17232951 Msa0281660:intron 15.0%
!! AGAAGGAAAATTATAAATAT+AGG + chr2_3:17233683-17233702 None:intergenic 15.0%
!!! GAAATTATAATTTTCAACTT+AGG - chr2_3:17234073-17234092 Msa0281660:CDS 15.0%
!!! AAGACTTCTATATAATTTTA+AGG - chr2_3:17234445-17234464 Msa0281660:intron 15.0%
!!! ATAATTTTAAGGATTCATTA+AGG - chr2_3:17234456-17234475 Msa0281660:intron 15.0%
!!! TAATTTTAAGGATTCATTAA+GGG - chr2_3:17234457-17234476 Msa0281660:intron 15.0%
!! ATTCAGTTTATGTTTATAAT+AGG - chr2_3:17234711-17234730 Msa0281660:intron 15.0%
!! AAAAATGAAAAAAAGATCTT+GGG + chr2_3:17235673-17235692 None:intergenic 15.0%
!! AAAAAATGAAAAAAAGATCT+TGG + chr2_3:17235674-17235693 None:intergenic 15.0%
!!! AATTTTTGGAAAAAAAAAAC+TGG - chr2_3:17235957-17235976 Msa0281660:intron 15.0%
!!! AATACTTTTTATCTAAATCT+AGG + chr2_3:17236711-17236730 None:intergenic 15.0%
!!! TTTATTGGTTAGTTGAATTT+TGG - chr2_3:17229360-17229379 Msa0281660:three_prime_UTR 20.0%
!!! TTGATTGTTTAGTTGAATTT+TGG - chr2_3:17229491-17229510 Msa0281660:CDS 20.0%
!!! TTTCATTGTTGTTGAAATTT+AGG - chr2_3:17229549-17229568 Msa0281660:intron 20.0%
!! TTGAAATTTAGGAACAATTA+GGG - chr2_3:17229560-17229579 Msa0281660:intron 20.0%
!!! TGATTTTTTTGGTTGAAATT+TGG - chr2_3:17229704-17229723 Msa0281660:CDS 20.0%
!!! TTTATGTTTTAACGAATTTG+TGG - chr2_3:17229730-17229749 Msa0281660:CDS 20.0%
!!! AATTTAAAATACAATCAGAC+AGG + chr2_3:17230165-17230184 None:intergenic 20.0%
!!! ATTATTTCTTAATCTGGATT+GGG - chr2_3:17231229-17231248 Msa0281660:intron 20.0%
!!! TTATGATTTAAGACAGAATT+GGG + chr2_3:17231915-17231934 None:intergenic 20.0%
!! TTAGTTAACTTACTAATAGT+TGG - chr2_3:17231992-17232011 Msa0281660:intron 20.0%
!!! GAAATGATTTATTTTTCTTG+GGG - chr2_3:17232259-17232278 Msa0281660:intron 20.0%
!!! AAATGATTTATTTTTCTTGG+GGG - chr2_3:17232260-17232279 Msa0281660:intron 20.0%
!! TACATAATCAAAGGAAAAAA+CGG + chr2_3:17232380-17232399 None:intergenic 20.0%
!! ATTAACAGATACATAATCAA+AGG + chr2_3:17232389-17232408 None:intergenic 20.0%
!!! ATAACTGAAATTCACTTTTT+GGG - chr2_3:17232435-17232454 Msa0281660:intron 20.0%
!! AAACAGAAGCTAAATAATAT+TGG + chr2_3:17233120-17233139 None:intergenic 20.0%
!! AACATTTCACAAAGAAAAAA+AGG + chr2_3:17233380-17233399 None:intergenic 20.0%
!!! TGATTGATAATTTTCAACTT+AGG - chr2_3:17234007-17234026 Msa0281660:intron 20.0%
!!! TGTATATTATTTTCTGTTAC+TGG - chr2_3:17234030-17234049 Msa0281660:intron 20.0%
!!! AAGATTATTACTATTTTGCT+TGG + chr2_3:17234373-17234392 None:intergenic 20.0%
!! ATTCATTAAGGGAATATAAA+AGG - chr2_3:17234468-17234487 Msa0281660:intron 20.0%
!! TTGCAGTTAAACTATAAAAT+TGG + chr2_3:17234946-17234965 None:intergenic 20.0%
!! AATTGATATTGATCCATTTA+TGG - chr2_3:17234964-17234983 Msa0281660:intron 20.0%
!!! ATTTCTTTTTATCTATTTGC+AGG - chr2_3:17235388-17235407 Msa0281660:intron 20.0%
!!! TGTTGTTTACCTATAAAATT+CGG + chr2_3:17235456-17235475 None:intergenic 20.0%
!! TGATAATAGAAATCTCATAT+TGG + chr2_3:17235644-17235663 None:intergenic 20.0%
!! AAAATGAAAAAAAGATCTTG+GGG + chr2_3:17235672-17235691 None:intergenic 20.0%
!!! AATTTTTATTTAGCCCTTTA+AGG + chr2_3:17235770-17235789 None:intergenic 20.0%
!!! GAAAAACTATTAAAAGCATA+TGG + chr2_3:17235902-17235921 None:intergenic 20.0%
!! AAAATACAAACAAAACTGTA+AGG + chr2_3:17236078-17236097 None:intergenic 20.0%
!! AGAAAATTCCATTGTTTATT+TGG - chr2_3:17236462-17236481 Msa0281660:intron 20.0%
!! GAAAATTCCATTGTTTATTT+GGG - chr2_3:17236463-17236482 Msa0281660:intron 20.0%
!! TTAAATTCAAAATAATCGGT+AGG + chr2_3:17237207-17237226 None:intergenic 20.0%
!! AAATATATACCTTAAACATG+CGG + chr2_3:17237530-17237549 None:intergenic 20.0%
!! TTAAAAACCATAAAATGAGT+GGG - chr2_3:17238104-17238123 Msa0281660:five_prime_UTR 20.0%
!!! GATTTGTTTTGTTATGCTTA+TGG - chr2_3:17229216-17229235 Msa0281660:three_prime_UTR 25.0%
!!! TGGTTTTGTTATACTAGATT+TGG - chr2_3:17229236-17229255 Msa0281660:three_prime_UTR 25.0%
! TTGGTTAAATCTGAGAATTT+AGG - chr2_3:17229255-17229274 Msa0281660:three_prime_UTR 25.0%
! TGGTTAAATCTGAGAATTTA+GGG - chr2_3:17229256-17229275 Msa0281660:three_prime_UTR 25.0%
! ATGTTTATTGCGATTTCATT+CGG - chr2_3:17229305-17229324 Msa0281660:three_prime_UTR 25.0%
!!! GGAATTTGATTTGAGAATTT+AGG - chr2_3:17229381-17229400 Msa0281660:three_prime_UTR 25.0%
!! TGAGAATTTAGGATTTAGTT+TGG - chr2_3:17229392-17229411 Msa0281660:three_prime_UTR 25.0%
!! GAGAATTTAGGATTTAGTTT+GGG - chr2_3:17229393-17229412 Msa0281660:three_prime_UTR 25.0%
!!! AGAATTTAGGATTTAGTTTG+GGG - chr2_3:17229394-17229413 Msa0281660:three_prime_UTR 25.0%
! GTTGAAATTTAGGAACAATT+AGG - chr2_3:17229559-17229578 Msa0281660:intron 25.0%
! TTAACGAATTTGTGGAAATT+TGG - chr2_3:17229738-17229757 Msa0281660:CDS 25.0%
!! TTTTTACTTTATTGGGCTAT+TGG - chr2_3:17230391-17230410 Msa0281660:intron 25.0%
!! TCCTCAACAAAATAATGTTT+TGG - chr2_3:17230585-17230604 Msa0281660:CDS 25.0%
!!! TCCAAAACATTATTTTGTTG+AGG + chr2_3:17230589-17230608 None:intergenic 25.0%
!!! TTGATTTTTGAGTAAGTAGT+TGG - chr2_3:17230645-17230664 Msa0281660:intron 25.0%
! TACAAAATGTTGTCAAATAG+CGG + chr2_3:17231063-17231082 None:intergenic 25.0%
!! GATTATTTCTTAATCTGGAT+TGG - chr2_3:17231228-17231247 Msa0281660:intron 25.0%
! CTGCTTCAATTTAGAAAAAT+AGG + chr2_3:17231274-17231293 None:intergenic 25.0%
!!! TGGGTTTTATTTATATAACC+TGG + chr2_3:17231303-17231322 None:intergenic 25.0%
! AGGTTATATAAATAAAACCC+AGG - chr2_3:17231302-17231321 Msa0281660:intron 25.0%
!!! GTACACTTTTTCCTATTAAT+AGG - chr2_3:17231708-17231727 Msa0281660:CDS 25.0%
! GATCGTAATATCCTATTAAT+AGG + chr2_3:17231722-17231741 None:intergenic 25.0%
!! CTTATGATTTAAGACAGAAT+TGG + chr2_3:17231916-17231935 None:intergenic 25.0%
!! CTTTTAGGCAGTAATAAAAA+AGG + chr2_3:17232175-17232194 None:intergenic 25.0%
!!! AATGATTTATTTTTCTTGGG+GGG - chr2_3:17232261-17232280 Msa0281660:intron 25.0%
!!! CATAACTGAAATTCACTTTT+TGG - chr2_3:17232434-17232453 Msa0281660:intron 25.0%
! ATCTTTAAACAAAAGAGGAT+AGG + chr2_3:17232867-17232886 None:intergenic 25.0%
! GATCAATCTTTAAACAAAAG+AGG + chr2_3:17232872-17232891 None:intergenic 25.0%
! TTAGATATATTTGTGGAGAT+TGG - chr2_3:17232939-17232958 Msa0281660:intron 25.0%
! TTAGCTTCTGTTTAATATTG+TGG - chr2_3:17233127-17233146 Msa0281660:intron 25.0%
! GAATATACCTCTAATAACTT+GGG + chr2_3:17233228-17233247 None:intergenic 25.0%
! AGAATATACCTCTAATAACT+TGG + chr2_3:17233229-17233248 None:intergenic 25.0%
!!! AATGTTCTTTTTCAAGAAGT+TGG + chr2_3:17233447-17233466 None:intergenic 25.0%
! ATTGTAACACAAATTTGAAC+AGG + chr2_3:17233961-17233980 None:intergenic 25.0%
! AAATGACACTAAATATGACA+CGG + chr2_3:17234155-17234174 None:intergenic 25.0%
! TGTTTACGCATAAATTCAAA+AGG - chr2_3:17234319-17234338 Msa0281660:intron 25.0%
!! GCTTGGTAATAACATTTATA+AGG + chr2_3:17234356-17234375 None:intergenic 25.0%
!! AAAGAAAATTTTGTCCGATA+AGG + chr2_3:17234748-17234767 None:intergenic 25.0%
! ATGTAAAGCACAAAATCAAA+CGG + chr2_3:17234813-17234832 None:intergenic 25.0%
!! TCTGAAAGATTTTATCCTAT+AGG - chr2_3:17235150-17235169 Msa0281660:intron 25.0%
!!! TTTTGAGATATTTTGCAACA+AGG - chr2_3:17235186-17235205 Msa0281660:intron 25.0%
!!! TTTGAGATATTTTGCAACAA+GGG - chr2_3:17235187-17235206 Msa0281660:intron 25.0%
! GAGAATATTATCACAAAAAG+TGG + chr2_3:17235245-17235264 None:intergenic 25.0%
! TGTGATAATATTCTCAAGAA+AGG - chr2_3:17235250-17235269 Msa0281660:intron 25.0%
! AATCATCAAGTTTAAGCATA+TGG + chr2_3:17235351-17235370 None:intergenic 25.0%
!! ATTTGTTTGCCGAATTTTAT+AGG - chr2_3:17235444-17235463 Msa0281660:intron 25.0%
! ATAGGTAAACAACATAGAAA+AGG - chr2_3:17235462-17235481 Msa0281660:intron 25.0%
! TCCAAAAGATTTAAACCATT+TGG - chr2_3:17235571-17235590 Msa0281660:intron 25.0%
!! TCCAAATGGTTTAAATCTTT+TGG + chr2_3:17235575-17235594 None:intergenic 25.0%
! ATCTCATATTGGACAAAATA+GGG + chr2_3:17235633-17235652 None:intergenic 25.0%
! AATCTCATATTGGACAAAAT+AGG + chr2_3:17235634-17235653 None:intergenic 25.0%
! AAATGAAAAAAAGATCTTGG+GGG + chr2_3:17235671-17235690 None:intergenic 25.0%
!!! GAAAGTCGATAGTTATTTTT+GGG - chr2_3:17235739-17235758 Msa0281660:intron 25.0%
!!! AAAGTCGATAGTTATTTTTG+GGG - chr2_3:17235740-17235759 Msa0281660:intron 25.0%
! GATATTAAAAGAGATAGCAA+TGG - chr2_3:17235795-17235814 Msa0281660:intron 25.0%
! TGGAAAAAAAAAACTGGATA+TGG - chr2_3:17235963-17235982 Msa0281660:intron 25.0%
!!! TTTGCTGTTCTGTTAATATA+AGG - chr2_3:17235994-17236013 Msa0281660:intron 25.0%
! ATGACATTGTTGAATCTTTA+TGG - chr2_3:17236107-17236126 Msa0281660:intron 25.0%
! TATAAATATACCATTTCTGC+AGG + chr2_3:17236648-17236667 None:intergenic 25.0%
!! CTGTTCTCTTTATTTATTGT+AGG - chr2_3:17236741-17236760 Msa0281660:intron 25.0%
! GATATGTACAAATTCTTGTA+TGG - chr2_3:17236975-17236994 Msa0281660:intron 25.0%
!!! GTTGTGTTTTGCTTTTTAAT+AGG - chr2_3:17237020-17237039 Msa0281660:intron 25.0%
! CAAAATTTACAGACAAAATG+AGG - chr2_3:17237229-17237248 Msa0281660:CDS 25.0%
! TGAGAAGAAAAAAGTTATTG+AGG - chr2_3:17237392-17237411 Msa0281660:intron 25.0%
! ACAAAACAATGTCATAAAAG+GGG + chr2_3:17237555-17237574 None:intergenic 25.0%
! GACAAAACAATGTCATAAAA+GGG + chr2_3:17237556-17237575 None:intergenic 25.0%
!!! CTTTTATGACATTGTTTTGT+CGG - chr2_3:17237555-17237574 Msa0281660:intron 25.0%
! TATAATCCTGAATTGTGATA+TGG - chr2_3:17237589-17237608 Msa0281660:intron 25.0%
! CTTAAAAACCATAAAATGAG+TGG - chr2_3:17238103-17238122 Msa0281660:five_prime_UTR 25.0%
! TGAGAATTTAGGGTTTAGTT+TGG - chr2_3:17229266-17229285 Msa0281660:three_prime_UTR 30.0%
! GAGAATTTAGGGTTTAGTTT+GGG - chr2_3:17229267-17229286 Msa0281660:three_prime_UTR 30.0%
!! AGAATTTAGGGTTTAGTTTG+GGG - chr2_3:17229268-17229287 Msa0281660:three_prime_UTR 30.0%
!! GAATTTAGGATTTAGTTTGG+GGG - chr2_3:17229395-17229414 Msa0281660:three_prime_UTR 30.0%
!! AATTTAGGATTTAGTTTGGG+GGG - chr2_3:17229396-17229415 Msa0281660:three_prime_UTR 30.0%
TTACTGCAATTTCATTCAGT+TGG - chr2_3:17229437-17229456 Msa0281660:CDS 30.0%
ATTTAGGAACAATTAGGGTT+TGG - chr2_3:17229565-17229584 Msa0281660:intron 30.0%
TTTAGGAACAATTAGGGTTT+GGG - chr2_3:17229566-17229585 Msa0281660:intron 30.0%
!! AAGACTATTGATTTAGAGCA+AGG - chr2_3:17229807-17229826 Msa0281660:intron 30.0%
!! TATTGATTTAGAGCAAGGAT+GGG - chr2_3:17229812-17229831 Msa0281660:intron 30.0%
! TTGTTTGCAACTTTTCTACT+AGG - chr2_3:17230308-17230327 Msa0281660:CDS 30.0%
! TGTTTGCAACTTTTCTACTA+GGG - chr2_3:17230309-17230328 Msa0281660:CDS 30.0%
! TGACGCATTTTCTTCTTTTT+AGG - chr2_3:17230492-17230511 Msa0281660:intron 30.0%
CTATAATTATCTAGTCCATG+TGG + chr2_3:17230623-17230642 None:intergenic 30.0%
!! AAAGTAGTTGGTAGCAAAAA+GGG + chr2_3:17230865-17230884 None:intergenic 30.0%
! AATAGTGGTTTGTCCAAATT+CGG - chr2_3:17231104-17231123 Msa0281660:intron 30.0%
! TTTTCTAAATTGAAGCAGCT+TGG - chr2_3:17231276-17231295 Msa0281660:intron 30.0%
!!! CCGTTTTCATTTTAAAACCT+GGG + chr2_3:17231322-17231341 None:intergenic 30.0%
!!! CCCAGGTTTTAAAATGAAAA+CGG - chr2_3:17231319-17231338 Msa0281660:intron 30.0%
!!! TCCGTTTTCATTTTAAAACC+TGG + chr2_3:17231323-17231342 None:intergenic 30.0%
!!! GGTTTTAAAATGAAAACGGA+AGG - chr2_3:17231323-17231342 Msa0281660:intron 30.0%
AAGTAACTGAACTAAAACAG+AGG + chr2_3:17231497-17231516 None:intergenic 30.0%
TCATGTTCTTCATGAACTTA+TGG - chr2_3:17231572-17231591 Msa0281660:intron 30.0%
! TGATCCAGATCTCTAAATTT+TGG - chr2_3:17231806-17231825 Msa0281660:intron 30.0%
GATTCCAAAATTTAGAGATC+TGG + chr2_3:17231813-17231832 None:intergenic 30.0%
TAACTAAAGCTAGTTAGAGA+GGG + chr2_3:17231979-17231998 None:intergenic 30.0%
TTAACTAAAGCTAGTTAGAG+AGG + chr2_3:17231980-17231999 None:intergenic 30.0%
TTATAGCGTCATTAGTTGAT+TGG - chr2_3:17232077-17232096 Msa0281660:CDS 30.0%
TGTGTCTCTTAAAATTTGAC+TGG - chr2_3:17232128-17232147 Msa0281660:intron 30.0%
ACCATAAAATCATGGTTAGA+TGG - chr2_3:17232531-17232550 Msa0281660:intron 30.0%
TTCTCGTTTCTTTCACTATT+TGG - chr2_3:17232556-17232575 Msa0281660:intron 30.0%
CTACTAATAGAAAACTCTGA+AGG + chr2_3:17232669-17232688 None:intergenic 30.0%
TTATCAATTCCAGGTTTACA+AGG - chr2_3:17232743-17232762 Msa0281660:intron 30.0%
AGGTTTACAAGGAAGTAAAT+GGG - chr2_3:17232754-17232773 Msa0281660:intron 30.0%
AGAACATACAAGAGAAATCA+CGG + chr2_3:17232793-17232812 None:intergenic 30.0%
TATATTTGTGGAGATTGGAA+TGG - chr2_3:17232944-17232963 Msa0281660:intron 30.0%
ATATTTGTGGAGATTGGAAT+GGG - chr2_3:17232945-17232964 Msa0281660:intron 30.0%
TTCTGCATATTATTCTCGAA+AGG - chr2_3:17233019-17233038 Msa0281660:intron 30.0%
AATATTGTGGCATTCATTAC+AGG - chr2_3:17233140-17233159 Msa0281660:intron 30.0%
! TTGCTATTATTCCAGCTATT+TGG - chr2_3:17233248-17233267 Msa0281660:intron 30.0%
CTTCTTGAAAAAGAACATTC+TGG - chr2_3:17233448-17233467 Msa0281660:intron 30.0%
GGTACTATTTAAGCGTAATA+TGG - chr2_3:17233498-17233517 Msa0281660:CDS 30.0%
TCTTCAACCTAAGCATTTAA+AGG + chr2_3:17233574-17233593 None:intergenic 30.0%
!!! CTCTTTTCTAAAATACCCAA+AGG - chr2_3:17233613-17233632 Msa0281660:intron 30.0%
TGCTTAAATATACTGGAAAC+AGG + chr2_3:17233646-17233665 None:intergenic 30.0%
TGTTTCCAGTATATTTAAGC+AGG - chr2_3:17233645-17233664 Msa0281660:intron 30.0%
! TTTGTAGTTGTCCTTATTTC+TGG - chr2_3:17233865-17233884 Msa0281660:intron 30.0%
! CTTTTCTATTGCAATAATCG+AGG - chr2_3:17233900-17233919 Msa0281660:intron 30.0%
AAAACTAGTACCGCAATAAT+CGG - chr2_3:17233923-17233942 Msa0281660:CDS 30.0%
! TTTACACAGAGTGTTAAGAT+AGG + chr2_3:17234241-17234260 None:intergenic 30.0%
TCTTAACACTCTGTGTAAAT+TGG - chr2_3:17234242-17234261 Msa0281660:CDS 30.0%
TAAGATTTGGACAATACAGA+AGG + chr2_3:17234676-17234695 None:intergenic 30.0%
GGTAAATTGTTTGCAAAATG+AGG + chr2_3:17234783-17234802 None:intergenic 30.0%
TAAATTAAAATGTCTGCAGC+CGG - chr2_3:17234872-17234891 Msa0281660:intron 30.0%
ATTATACGATCATAACCTTG+TGG + chr2_3:17235096-17235115 None:intergenic 30.0%
! TTTTATCCTATAGGCTCTTA+AGG - chr2_3:17235159-17235178 Msa0281660:intron 30.0%
GATAATATTCTCAAGAAAGG+CGG - chr2_3:17235253-17235272 Msa0281660:intron 30.0%
AATTGAAGAAACACTTGAGA+AGG - chr2_3:17235300-17235319 Msa0281660:intron 30.0%
ACAAAATAGGGAAAACTAAC+GGG + chr2_3:17235621-17235640 None:intergenic 30.0%
GACAAAATAGGGAAAACTAA+CGG + chr2_3:17235622-17235641 None:intergenic 30.0%
!! GGAAAGTCGATAGTTATTTT+TGG - chr2_3:17235738-17235757 Msa0281660:intron 30.0%
!! ATTTTTGGGGAAAACCTTAA+AGG - chr2_3:17235753-17235772 Msa0281660:intron 30.0%
!! TTTTTGGGGAAAACCTTAAA+GGG - chr2_3:17235754-17235773 Msa0281660:intron 30.0%
GCAATGGTATATTGAGAAAA+TGG - chr2_3:17235811-17235830 Msa0281660:intron 30.0%
GAAAGTGAACTGCAATTAAT+TGG - chr2_3:17235839-17235858 Msa0281660:intron 30.0%
!!! GCAGACTGTTTTAGAATTTT+TGG - chr2_3:17235943-17235962 Msa0281660:intron 30.0%
TAATTAACCGAAACCCAAAA+AGG + chr2_3:17236050-17236069 None:intergenic 30.0%
ATTGTTGAATCTTTATGGCA+CGG - chr2_3:17236112-17236131 Msa0281660:intron 30.0%
TTATGAAAGTGAGTTCCATT+AGG + chr2_3:17236216-17236235 None:intergenic 30.0%
ATAATATCATACATCTTGCC+TGG - chr2_3:17236241-17236260 Msa0281660:intron 30.0%
TTGTTAAAATACTCCTCTCA+TGG + chr2_3:17236325-17236344 None:intergenic 30.0%
ACAAAATTGAAGCAACAATG+TGG - chr2_3:17236341-17236360 Msa0281660:intron 30.0%
TGGTCAATTTACTTCAAAGA+TGG - chr2_3:17236364-17236383 Msa0281660:intron 30.0%
CAATTTACTTCAAAGATGGA+AGG - chr2_3:17236368-17236387 Msa0281660:intron 30.0%
GATAGAACCCAAATAAACAA+TGG + chr2_3:17236473-17236492 None:intergenic 30.0%
! TTGTTTATTTGGGTTCTATC+AGG - chr2_3:17236473-17236492 Msa0281660:intron 30.0%
! AATATTCCTCAAAGCTTGTT+TGG + chr2_3:17236527-17236546 None:intergenic 30.0%
AGGTCAAAAGATTTGTAACT+AGG + chr2_3:17236618-17236637 None:intergenic 30.0%
AGATACTATCGAACATTTCT+GGG + chr2_3:17236686-17236705 None:intergenic 30.0%
TAGATACTATCGAACATTTC+TGG + chr2_3:17236687-17236706 None:intergenic 30.0%
! TAAGTGTGTAGAAGTTTTCA+AGG - chr2_3:17236765-17236784 Msa0281660:intron 30.0%
ACTTACTTGGATTTATTCCT+TGG - chr2_3:17236819-17236838 Msa0281660:intron 30.0%
CTTACTTGGATTTATTCCTT+GGG - chr2_3:17236820-17236839 Msa0281660:intron 30.0%
AAATTTCCCACTTATATTGC+AGG + chr2_3:17236848-17236867 None:intergenic 30.0%
GAAATTTGAACCAAAAACCA+TGG - chr2_3:17236861-17236880 Msa0281660:intron 30.0%
TATGCACAAGAAATATAACC+TGG + chr2_3:17236906-17236925 None:intergenic 30.0%
TGGATTTATCTTTACTTACC+CGG - chr2_3:17236995-17237014 Msa0281660:intron 30.0%
AAAAAGCAAAACACAACATC+CGG + chr2_3:17237017-17237036 None:intergenic 30.0%
!! ACTGAGTTATTCTGAGATAA+TGG - chr2_3:17237077-17237096 Msa0281660:CDS 30.0%
CTTGTTAAGAATCTTGTACT+TGG + chr2_3:17237160-17237179 None:intergenic 30.0%
CAAGTACAAGATTCTTAACA+AGG - chr2_3:17237158-17237177 Msa0281660:intron 30.0%
AATTTACAGACAAAATGAGG+AGG - chr2_3:17237232-17237251 Msa0281660:CDS 30.0%
!!! CGTAATTATTTTAGTCTCTG+TGG - chr2_3:17237305-17237324 Msa0281660:CDS 30.0%
AAATTACCAACAGTTAGTGA+TGG - chr2_3:17237485-17237504 Msa0281660:intron 30.0%
CGACAAAACAATGTCATAAA+AGG + chr2_3:17237557-17237576 None:intergenic 30.0%
CATTATCCATATCACAATTC+AGG + chr2_3:17237598-17237617 None:intergenic 30.0%
! TGCAAATTTGTTCAAGTACT+TGG - chr2_3:17237703-17237722 Msa0281660:intron 30.0%
! TTTTCTCCATATCCAAGTAT+CGG - chr2_3:17237864-17237883 Msa0281660:intron 30.0%
GATCAGTTCTATAATCAAGT+AGG - chr2_3:17237926-17237945 Msa0281660:intron 30.0%
CAGGCAATAAAAAACCAAAA+AGG + chr2_3:17237967-17237986 None:intergenic 30.0%
CAATTCCTATTTCCAATATG+GGG + chr2_3:17238043-17238062 None:intergenic 30.0%
GCAATTCCTATTTCCAATAT+GGG + chr2_3:17238044-17238063 None:intergenic 30.0%
! TTGCGTTACTTTAGTTTAAG+TGG - chr2_3:17238060-17238079 Msa0281660:five_prime_UTR 30.0%
AGAAACCCTGATAAAGGTTT+CGG + chr2_3:17229140-17229159 None:intergenic 35.0%
AGTAAGAGAAACCCTGATAA+AGG + chr2_3:17229146-17229165 None:intergenic 35.0%
CACGATTCTTTACCGAAAAA+GGG - chr2_3:17229177-17229196 Msa0281660:three_prime_UTR 35.0%
! GAGATAAACGTACCCTTTTT+CGG + chr2_3:17229192-17229211 None:intergenic 35.0%
TTATTGCGATTTCATTCGGT+AGG - chr2_3:17229309-17229328 Msa0281660:three_prime_UTR 35.0%
CAATTTCATTCAGTTGGAGT+TGG - chr2_3:17229443-17229462 Msa0281660:CDS 35.0%
TTAGGAACAATTAGGGTTTG+GGG - chr2_3:17229567-17229586 Msa0281660:intron 35.0%
!! CTATTGATTTAGAGCAAGGA+TGG - chr2_3:17229811-17229830 Msa0281660:intron 35.0%
ACAGAAGCTGAAGAATATTC+TGG - chr2_3:17229854-17229873 Msa0281660:intron 35.0%
AAGCTGAAGAATATTCTGGA+AGG - chr2_3:17229858-17229877 Msa0281660:intron 35.0%
! AGCTGAAGAATATTCTGGAA+GGG - chr2_3:17229859-17229878 Msa0281660:intron 35.0%
TGTAGTCATTTGATCCGTAA+TGG - chr2_3:17230199-17230218 Msa0281660:intron 35.0%
! GCTTGATTGTTGTTGTTGTT+TGG - chr2_3:17230264-17230283 Msa0281660:CDS 35.0%
ATATCATGTCATAGGTCACA+AGG + chr2_3:17230469-17230488 None:intergenic 35.0%
CGTCATTGATATCATGTCAT+AGG + chr2_3:17230477-17230496 None:intergenic 35.0%
GAGGACTACTTATAAGAACT+AGG + chr2_3:17230570-17230589 None:intergenic 35.0%
TAATTATCTAGTCCATGTGG+AGG + chr2_3:17230620-17230639 None:intergenic 35.0%
! ATGTTATGTGGTTAGTTGTG+TGG + chr2_3:17230688-17230707 None:intergenic 35.0%
ACACAACTAACCACATAACA+TGG - chr2_3:17230687-17230706 Msa0281660:intron 35.0%
AAATGTCTGACCATGTTATG+TGG + chr2_3:17230700-17230719 None:intergenic 35.0%
TGGTTGTTTGTTCTTGTCTA+TGG + chr2_3:17230776-17230795 None:intergenic 35.0%
ACCATACACCATGTAACATT+TGG - chr2_3:17230792-17230811 Msa0281660:CDS 35.0%
CCATACACCATGTAACATTT+GGG - chr2_3:17230793-17230812 Msa0281660:CDS 35.0%
CATACACCATGTAACATTTG+GGG - chr2_3:17230794-17230813 Msa0281660:CDS 35.0%
! CTTTTTCCCCAAATGTTACA+TGG + chr2_3:17230803-17230822 None:intergenic 35.0%
!! GAAAGTAGTTGGTAGCAAAA+AGG + chr2_3:17230866-17230885 None:intergenic 35.0%
AACACCCACTAAATACCTTT+GGG - chr2_3:17230940-17230959 Msa0281660:intron 35.0%
!! CAATCCCAAAGGTATTTAGT+GGG + chr2_3:17230947-17230966 None:intergenic 35.0%
TAGCTGCCATTAACAATATC+TGG - chr2_3:17231133-17231152 Msa0281660:intron 35.0%
ACCTCACCAGATATTGTTAA+TGG + chr2_3:17231142-17231161 None:intergenic 35.0%
AAAAAAAAATATCGGGCGTG+TGG - chr2_3:17231171-17231190 Msa0281660:intron 35.0%
AAATTATTGGGATCGTGAGT+TGG - chr2_3:17231196-17231215 Msa0281660:intron 35.0%
! CACGGGATTATTTCTTAATC+TGG - chr2_3:17231223-17231242 Msa0281660:intron 35.0%
AACAGAGAAACTAAGGGAAA+GGG + chr2_3:17231439-17231458 None:intergenic 35.0%
AAACAGAGAAACTAAGGGAA+AGG + chr2_3:17231440-17231459 None:intergenic 35.0%
GCAAGAAACAGAGAAACTAA+GGG + chr2_3:17231445-17231464 None:intergenic 35.0%
TGCAAGAAACAGAGAAACTA+AGG + chr2_3:17231446-17231465 None:intergenic 35.0%
GGATGAAGTAACTAAAACAG+AGG + chr2_3:17231476-17231495 None:intergenic 35.0%
TCATGAAGAACATGAAACAG+AGG + chr2_3:17231567-17231586 None:intergenic 35.0%
ATAGTAACTACGAATCTCTG+TGG - chr2_3:17231863-17231882 Msa0281660:CDS 35.0%
TAGTAACTACGAATCTCTGT+GGG - chr2_3:17231864-17231883 Msa0281660:CDS 35.0%
! GATTTAAGACAGAATTGGGA+AGG + chr2_3:17231911-17231930 None:intergenic 35.0%
!! TGAGACTGATTTGAATTTGC+TGG - chr2_3:17232030-17232049 Msa0281660:intron 35.0%
!! CTGATTTGAATTTGCTGGAA+AGG - chr2_3:17232035-17232054 Msa0281660:intron 35.0%
!! TTTGAATTTGCTGGAAAGGA+TGG - chr2_3:17232039-17232058 Msa0281660:intron 35.0%
!! GTCAAGCAGATTTTGCTTTT+AGG + chr2_3:17232190-17232209 None:intergenic 35.0%
TCATGTGGCTCATTTAATTG+AGG - chr2_3:17232301-17232320 Msa0281660:intron 35.0%
! CATTTAATTGAGGTGTCATG+TGG - chr2_3:17232311-17232330 Msa0281660:intron 35.0%
!!! AAATTCACTTTTTGGGCTTC+AGG - chr2_3:17232442-17232461 Msa0281660:intron 35.0%
! GCCATCTAACCATGATTTTA+TGG + chr2_3:17232535-17232554 None:intergenic 35.0%
TGGATCGATACTTTATTGCT+CGG - chr2_3:17232576-17232595 Msa0281660:intron 35.0%
CATTTACTTCCTTGTAAACC+TGG + chr2_3:17232755-17232774 None:intergenic 35.0%
CAGGTTTACAAGGAAGTAAA+TGG - chr2_3:17232753-17232772 Msa0281660:intron 35.0%
AAGATTGATCAAGAACGTGA+AGG - chr2_3:17232882-17232901 Msa0281660:intron 35.0%
TATTTGTGGAGATTGGAATG+GGG - chr2_3:17232946-17232965 Msa0281660:intron 35.0%
AATCAGGACAAGAATCTTCT+AGG + chr2_3:17233058-17233077 None:intergenic 35.0%
TTGTCCTGATTATATGCTCA+AGG - chr2_3:17233067-17233086 Msa0281660:intron 35.0%
GATACCTTGAGCATATAATC+AGG + chr2_3:17233074-17233093 None:intergenic 35.0%
!!! ACAGTTTTAGACCAAATAGC+TGG + chr2_3:17233262-17233281 None:intergenic 35.0%
TGCATTACTTAGAGATGACA+AGG - chr2_3:17233477-17233496 Msa0281660:intron 35.0%
ACAGCTTCCTTTAAATGCTT+AGG - chr2_3:17233564-17233583 Msa0281660:intron 35.0%
!! TTCTAAAATACCCAAAGGCT+TGG - chr2_3:17233618-17233637 Msa0281660:intron 35.0%
CACAACCTGCTTAAATATAC+TGG + chr2_3:17233653-17233672 None:intergenic 35.0%
ATTTCTCCTTTCATTCCTGA+TGG - chr2_3:17233733-17233752 Msa0281660:intron 35.0%
!! TTGTCCTTATTTCTGGTTGA+GGG - chr2_3:17233872-17233891 Msa0281660:intron 35.0%
TAACACAAATTTGAACAGGC+GGG + chr2_3:17233957-17233976 None:intergenic 35.0%
GTAACACAAATTTGAACAGG+CGG + chr2_3:17233958-17233977 None:intergenic 35.0%
GTAAATAAGTCAAACTCGTG+TGG + chr2_3:17234219-17234238 None:intergenic 35.0%
ATTGTATAAGACGAGATCTC+AGG + chr2_3:17234538-17234557 None:intergenic 35.0%
TATACAATCCCAGAAGTTAC+TGG - chr2_3:17234550-17234569 Msa0281660:CDS 35.0%
TAAACTGAATGATGCTAGCT+TGG + chr2_3:17234701-17234720 None:intergenic 35.0%
ACAAAATCAAACGGAAGAGT+GGG + chr2_3:17234804-17234823 None:intergenic 35.0%
CCAATCTCAGTTTCCATAAA+TGG + chr2_3:17234980-17234999 None:intergenic 35.0%
CCATTTATGGAAACTGAGAT+TGG - chr2_3:17234977-17234996 Msa0281660:intron 35.0%
TGTGGAATAGAGTATGATTC+TGG + chr2_3:17235078-17235097 None:intergenic 35.0%
GAATCATACTCTATTCCACA+AGG - chr2_3:17235078-17235097 Msa0281660:intron 35.0%
!! AACTAACGGGTTTATAAGCA+AGG + chr2_3:17235608-17235627 None:intergenic 35.0%
GTTCTGTTAATATAAGGTCC+AGG - chr2_3:17236000-17236019 Msa0281660:intron 35.0%
CAAAAGCTTCACTTCAATGA+TGG + chr2_3:17236157-17236176 None:intergenic 35.0%
! TCATTGAAGTGAAGCTTTTG+TGG - chr2_3:17236157-17236176 Msa0281660:intron 35.0%
AGTGAGTTCCATTAGGAAAA+CGG + chr2_3:17236209-17236228 None:intergenic 35.0%
AAATTGAAGCAACAATGTGG+TGG - chr2_3:17236344-17236363 Msa0281660:intron 35.0%
TACTTCAAAGATGGAAGGAA+TGG - chr2_3:17236373-17236392 Msa0281660:intron 35.0%
!! GTCTTTTCAAGACTTTGTGA+TGG - chr2_3:17236399-17236418 Msa0281660:intron 35.0%
AATAATCCTAATGTAGACCC+CGG - chr2_3:17236552-17236571 Msa0281660:intron 35.0%
AGTAACTGTCAAGTCAATTC+CGG + chr2_3:17236574-17236593 None:intergenic 35.0%
CTAAGCACAGAAAACTTACT+TGG - chr2_3:17236806-17236825 Msa0281660:intron 35.0%
! ACAATCAGTTCCATGGTTTT+TGG + chr2_3:17236874-17236893 None:intergenic 35.0%
AAAAGCAAAACACAACATCC+GGG + chr2_3:17237016-17237035 None:intergenic 35.0%
AGAATAACTCAGTCTATCTG+AGG + chr2_3:17237070-17237089 None:intergenic 35.0%
TATGAGTCAGTCTAACTCAA+GGG + chr2_3:17237339-17237358 None:intergenic 35.0%
TTATGAGTCAGTCTAACTCA+AGG + chr2_3:17237340-17237359 None:intergenic 35.0%
!!! ACTTTTTTCTTCTCATCCAC+AGG + chr2_3:17237387-17237406 None:intergenic 35.0%
AGTTATTGAGGATGTTGACA+AGG - chr2_3:17237404-17237423 Msa0281660:intron 35.0%
CTTCATAATACGCACAATTG+AGG + chr2_3:17237451-17237470 None:intergenic 35.0%
TTGTGCGTATTATGAAGAGT+CGG - chr2_3:17237454-17237473 Msa0281660:intron 35.0%
TTCTTAATTGCCTTGACATC+AGG + chr2_3:17237632-17237651 None:intergenic 35.0%
ATGTCAAGGCAATTAAGAAG+CGG - chr2_3:17237633-17237652 Msa0281660:intron 35.0%
CATTATCTTTGTCTCTTTCC+AGG + chr2_3:17237685-17237704 None:intergenic 35.0%
ATAGCAAAACAAGATGAGGA+TGG - chr2_3:17237771-17237790 Msa0281660:intron 35.0%
GTTACTCTCAATTTCCTTGA+AGG - chr2_3:17237816-17237835 Msa0281660:intron 35.0%
TATAATCAAGTAGGCCTAGA+TGG - chr2_3:17237935-17237954 Msa0281660:intron 35.0%
!! CAAAAAGGAAAGTACCATCT+AGG + chr2_3:17237952-17237971 None:intergenic 35.0%
! CTAGATGGTACTTTCCTTTT+TGG - chr2_3:17237950-17237969 Msa0281660:intron 35.0%
GGTGTGGGAGAAATAATTAA+TGG + chr2_3:17238022-17238041 None:intergenic 35.0%
CGCAATTCCTATTTCCAATA+TGG + chr2_3:17238045-17238064 None:intergenic 35.0%
AACCATAAAATGAGTGGGTA+TGG - chr2_3:17238109-17238128 Msa0281660:five_prime_UTR 35.0%
CTTCACCGAAACCTTTATCA+GGG - chr2_3:17229132-17229151 Msa0281660:three_prime_UTR 40.0%
GCACGATTCTTTACCGAAAA+AGG - chr2_3:17229176-17229195 Msa0281660:three_prime_UTR 40.0%
!! GATTTAGTTTGGGGGGATTA+GGG - chr2_3:17229403-17229422 Msa0281660:three_prime_UTR 40.0%
TAGGAACAATTAGGGTTTGG+GGG - chr2_3:17229568-17229587 Msa0281660:intron 40.0%
!! AGAGTTTGCTGTTAAGGCTA+GGG - chr2_3:17229765-17229784 Msa0281660:intron 40.0%
AGGGATTATCGATGAGTGAA+CGG - chr2_3:17229784-17229803 Msa0281660:intron 40.0%
! AGGATGGGATTTTATGCTGA+AGG - chr2_3:17229827-17229846 Msa0281660:intron 40.0%
! GGATGGGATTTTATGCTGAA+GGG - chr2_3:17229828-17229847 Msa0281660:intron 40.0%
GTACTTATCATACAGCGGTT+GGG + chr2_3:17230067-17230086 None:intergenic 40.0%
TGTACTTATCATACAGCGGT+TGG + chr2_3:17230068-17230087 None:intergenic 40.0%
AACCGCTGTATGATAAGTAC+AGG - chr2_3:17230067-17230086 Msa0281660:CDS 40.0%
ACCGCTGTATGATAAGTACA+GGG - chr2_3:17230068-17230087 Msa0281660:CDS 40.0%
TCCCTGTACTTATCATACAG+CGG + chr2_3:17230072-17230091 None:intergenic 40.0%
TGGATCAAAGGACACCATTA+CGG + chr2_3:17230216-17230235 None:intergenic 40.0%
!! CTTTATTGGGCTATTGGCTT+AGG - chr2_3:17230397-17230416 Msa0281660:intron 40.0%
CCCAAATGTTACATGGTGTA+TGG + chr2_3:17230796-17230815 None:intergenic 40.0%
CTCAGATCTTGTCTATGGTT+TGG + chr2_3:17230838-17230857 None:intergenic 40.0%
GTACACTCAGATCTTGTCTA+TGG + chr2_3:17230843-17230862 None:intergenic 40.0%
GGACTGATTGAGAAAGTAGT+TGG + chr2_3:17230877-17230896 None:intergenic 40.0%
!! CAAAGGTATTTAGTGGGTGT+TGG + chr2_3:17230941-17230960 None:intergenic 40.0%
CAACACCCACTAAATACCTT+TGG - chr2_3:17230939-17230958 Msa0281660:intron 40.0%
!! CCAATCCCAAAGGTATTTAG+TGG + chr2_3:17230948-17230967 None:intergenic 40.0%
!! CCACTAAATACCTTTGGGAT+TGG - chr2_3:17230945-17230964 Msa0281660:intron 40.0%
!! GAGATCAGTTTTGTCAATCG+TGG - chr2_3:17230975-17230994 Msa0281660:intron 40.0%
TCGTGGATAGCTGAAAATAG+TGG - chr2_3:17230992-17231011 Msa0281660:intron 40.0%
CGTGGATAGCTGAAAATAGT+GGG - chr2_3:17230993-17231012 Msa0281660:intron 40.0%
TTGTCAAATAGCGGCTATAG+TGG + chr2_3:17231054-17231073 None:intergenic 40.0%
GACAAACCACTATTGTTCCA+CGG + chr2_3:17231098-17231117 None:intergenic 40.0%
GCCATTAACAATATCTGGTG+AGG - chr2_3:17231138-17231157 Msa0281660:intron 40.0%
GGGCGTGTGGAAAAATTATT+GGG - chr2_3:17231184-17231203 Msa0281660:intron 40.0%
ACAGAGAAACTAAGGGAAAG+GGG + chr2_3:17231438-17231457 None:intergenic 40.0%
! GTTTCTCTGTTTCTTGCATG+TGG - chr2_3:17231448-17231467 Msa0281660:intron 40.0%
GGAATCAAAATGATCAGCCA+AGG - chr2_3:17231827-17231846 Msa0281660:intron 40.0%
CTATAGAGTAAAGACAGCCT+TGG + chr2_3:17231847-17231866 None:intergenic 40.0%
!! GATTTATTTTTCTTGGGGGG+TGG - chr2_3:17232264-17232283 Msa0281660:intron 40.0%
TTATGTTGCGAGAACTTGTG+AGG - chr2_3:17232498-17232517 Msa0281660:intron 40.0%
! GTGGGCTAACCATAAAATCA+TGG - chr2_3:17232523-17232542 Msa0281660:intron 40.0%
ATCGATACTTTATTGCTCGG+AGG - chr2_3:17232579-17232598 Msa0281660:intron 40.0%
TTCCTCCGCTTAATGAAGTT+GGG - chr2_3:17232606-17232625 Msa0281660:intron 40.0%
ATTCTCGAAAGGCTTCAAAC+TGG - chr2_3:17233030-17233049 Msa0281660:intron 40.0%
TGGAAATGAAGAAACCACGA+AGG + chr2_3:17233100-17233119 None:intergenic 40.0%
ATTGTGGCATTCATTACAGG+CGG - chr2_3:17233143-17233162 Msa0281660:intron 40.0%
CTTGAAACGGGAGAAAGATA+GGG - chr2_3:17233173-17233192 Msa0281660:intron 40.0%
!! CTTAGGTTGAAGACTTGTCA+AGG - chr2_3:17233581-17233600 Msa0281660:intron 40.0%
GACAAACCATCAGGAATGAA+AGG + chr2_3:17233742-17233761 None:intergenic 40.0%
CATCACATAGACAAACCATC+AGG + chr2_3:17233751-17233770 None:intergenic 40.0%
TTCGGTAACATGCTGCATAT+AGG + chr2_3:17233782-17233801 None:intergenic 40.0%
AGATGCAGCAAGTAACAAGA+AGG - chr2_3:17233831-17233850 Msa0281660:intron 40.0%
!! GTTGTCCTTATTTCTGGTTG+AGG - chr2_3:17233871-17233890 Msa0281660:intron 40.0%
!! TGTCCTTATTTCTGGTTGAG+GGG - chr2_3:17233873-17233892 Msa0281660:intron 40.0%
TAACCCCTCAACCAGAAATA+AGG + chr2_3:17233879-17233898 None:intergenic 40.0%
TAACGTGCTACATGACATGA+TGG - chr2_3:17234278-17234297 Msa0281660:intron 40.0%
!! GACATGATGGACAAACAATC+TGG - chr2_3:17234291-17234310 Msa0281660:intron 40.0%
GTCTTTGTCCAGTAACTTCT+GGG + chr2_3:17234561-17234580 None:intergenic 40.0%
TGTCTTTGTCCAGTAACTTC+TGG + chr2_3:17234562-17234581 None:intergenic 40.0%
!! TTGACTTTTTGAGCCAACGA+TGG - chr2_3:17234586-17234605 Msa0281660:CDS 40.0%
GATATCTACTAGTCCATCGT+TGG + chr2_3:17234602-17234621 None:intergenic 40.0%
GATTTGGACAATACAGAAGG+AGG + chr2_3:17234673-17234692 None:intergenic 40.0%
! TGCTAGCTTGGCATAAGATT+TGG + chr2_3:17234689-17234708 None:intergenic 40.0%
CACAAAATCAAACGGAAGAG+TGG + chr2_3:17234805-17234824 None:intergenic 40.0%
! CCAACAATATCCCTTTTCTC+CGG + chr2_3:17234894-17234913 None:intergenic 40.0%
CGGAGAAAAGGGATATTGTT+GGG - chr2_3:17234892-17234911 Msa0281660:intron 40.0%
TATTGTTGGGTTACAAGAGC+AGG - chr2_3:17234905-17234924 Msa0281660:intron 40.0%
!! TGAGATTGGTCTCTTTCTTC+AGG - chr2_3:17234991-17235010 Msa0281660:intron 40.0%
TATCCTATAGGCTCTTAAGG+AGG - chr2_3:17235162-17235181 Msa0281660:intron 40.0%
ACAAAAAGTGGCAAGCAGTT+CGG + chr2_3:17235233-17235252 None:intergenic 40.0%
TAGAATGTGTCAGACCCAAT+TGG - chr2_3:17235498-17235517 Msa0281660:intron 40.0%
GACTTTAGTGGTCTAAGCTT+GGG - chr2_3:17235539-17235558 Msa0281660:intron 40.0%
ACTTTAGTGGTCTAAGCTTG+GGG - chr2_3:17235540-17235559 Msa0281660:intron 40.0%
!! TAACGGGTTTATAAGCAAGG+TGG + chr2_3:17235605-17235624 None:intergenic 40.0%
TGAAAAAAAGATCTTGGGGG+AGG + chr2_3:17235668-17235687 None:intergenic 40.0%
! TTTTCTTCCACGCATGTTAC+TGG - chr2_3:17235717-17235736 Msa0281660:intron 40.0%
CCAAAAAGGACAAAGCCAAA+GGG + chr2_3:17236036-17236055 None:intergenic 40.0%
!!! CCTTTGGCTTTGTCCTTTTT+GGG - chr2_3:17236034-17236053 Msa0281660:intron 40.0%
!!! GCTTTGTCCTTTTTGGGTTT+CGG - chr2_3:17236040-17236059 Msa0281660:intron 40.0%
TGAGTTCCATTAGGAAAACG+GGG + chr2_3:17236207-17236226 None:intergenic 40.0%
GTGAGTTCCATTAGGAAAAC+GGG + chr2_3:17236208-17236227 None:intergenic 40.0%
TCAGGTTACAGATTTGACAC+TGG - chr2_3:17236491-17236510 Msa0281660:intron 40.0%
TACAGATTTGACACTGGCAA+AGG - chr2_3:17236497-17236516 Msa0281660:intron 40.0%
TAACTGTCAAGTCAATTCCG+GGG + chr2_3:17236572-17236591 None:intergenic 40.0%
GTAACTGTCAAGTCAATTCC+GGG + chr2_3:17236573-17236592 None:intergenic 40.0%
ACTTATATTGCAGGTACCCA+AGG + chr2_3:17236839-17236858 None:intergenic 40.0%
TTGGGTACCTGCAATATAAG+TGG - chr2_3:17236838-17236857 Msa0281660:intron 40.0%
TGGGTACCTGCAATATAAGT+GGG - chr2_3:17236839-17236858 Msa0281660:intron 40.0%
AGTAGTCACAATCAGTTCCA+TGG + chr2_3:17236881-17236900 None:intergenic 40.0%
ACTGATTGTGACTACTTACC+AGG - chr2_3:17236885-17236904 Msa0281660:intron 40.0%
CTTGTACTTGGCACATGATA+AGG + chr2_3:17237148-17237167 None:intergenic 40.0%
GGTAATATTGCTTTCGTGCT+TGG + chr2_3:17237186-17237205 None:intergenic 40.0%
AGACAAAATGAGGAGGATCA+AGG - chr2_3:17237239-17237258 Msa0281660:CDS 40.0%
! TTTTTCTTCTCATCCACAGG+AGG + chr2_3:17237384-17237403 None:intergenic 40.0%
GCAGATAGCAAAACAAGATG+AGG - chr2_3:17237767-17237786 Msa0281660:intron 40.0%
CTCTCAATTTCCTTGAAGGA+AGG - chr2_3:17237820-17237839 Msa0281660:intron 40.0%
ACTTATAGCTCCTTCCTTCA+AGG + chr2_3:17237833-17237852 None:intergenic 40.0%
CTGTAAATGTGTGCTCATGT+TGG - chr2_3:17237894-17237913 Msa0281660:intron 40.0%
ATGTGTGCTCATGTTGGAAA+AGG - chr2_3:17237900-17237919 Msa0281660:intron 40.0%
AAGTCATCAGATGTGAATGC+AGG + chr2_3:17237986-17238005 None:intergenic 40.0%
CTATTTCCAATATGGGGTGT+GGG + chr2_3:17238037-17238056 None:intergenic 40.0%
! TGCCATACCCACTCATTTTA+TGG + chr2_3:17238114-17238133 None:intergenic 40.0%
CCTGATAAAGGTTTCGGTGA+AGG + chr2_3:17229134-17229153 None:intergenic 45.0%
CCTTCACCGAAACCTTTATC+AGG - chr2_3:17229131-17229150 Msa0281660:three_prime_UTR 45.0%
TAAAGAATCGTGCGCGATGA+TGG + chr2_3:17229169-17229188 None:intergenic 45.0%
!! TAGGGTTTAGTTTGGGGACT+AGG - chr2_3:17229274-17229293 Msa0281660:three_prime_UTR 45.0%
!! AGGGTTTAGTTTGGGGACTA+GGG - chr2_3:17229275-17229294 Msa0281660:three_prime_UTR 45.0%
CGATTTCATTCGGTAGGAGT+TGG - chr2_3:17229315-17229334 Msa0281660:three_prime_UTR 45.0%
!! GGATTTAGTTTGGGGGGATT+AGG - chr2_3:17229402-17229421 Msa0281660:three_prime_UTR 45.0%
AACAATTAGGGTTTGGGGGA+AGG - chr2_3:17229572-17229591 Msa0281660:intron 45.0%
!! GGTTGCAGAGTTTGCTGTTA+AGG - chr2_3:17229759-17229778 Msa0281660:CDS 45.0%
!! CAGAGTTTGCTGTTAAGGCT+AGG - chr2_3:17229764-17229783 Msa0281660:CDS 45.0%
!!! TGGGTTTTGTTTGAGCTCTG+AGG - chr2_3:17229965-17229984 Msa0281660:CDS 45.0%
GGTTGGGAATAGTCATTTGG+AGG + chr2_3:17230051-17230070 None:intergenic 45.0%
AGCGGTTGGGAATAGTCATT+TGG + chr2_3:17230054-17230073 None:intergenic 45.0%
GCTGTATGATAAGTACAGGG+AGG - chr2_3:17230071-17230090 Msa0281660:CDS 45.0%
!! TAAGTACAGGGAGGCATTTG+AGG - chr2_3:17230080-17230099 Msa0281660:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_3:17230248-17230267 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_3:17230249-17230268 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + chr2_3:17230250-17230269 None:intergenic 45.0%
TGGAACATTCAACCTCCACA+TGG - chr2_3:17230605-17230624 Msa0281660:CDS 45.0%
CTATGGAAGACATGAGACAC+TGG + chr2_3:17230759-17230778 None:intergenic 45.0%
CACAACTTGCAACAGACAAG+TGG + chr2_3:17230898-17230917 None:intergenic 45.0%
!! AATACCTTTGGGATTGGACG+TGG - chr2_3:17230951-17230970 Msa0281660:intron 45.0%
TTGTACTAAATAGCGTGCCG+TGG - chr2_3:17231078-17231097 Msa0281660:intron 45.0%
GCAGCTATAGTAGCCGAATT+TGG + chr2_3:17231120-17231139 None:intergenic 45.0%
CGGGCGTGTGGAAAAATTAT+TGG - chr2_3:17231183-17231202 Msa0281660:intron 45.0%
AAATTGAAGCAGCTTGGACC+AGG - chr2_3:17231282-17231301 Msa0281660:intron 45.0%
AGCTGAAAGATCGTAACTCG+AGG + chr2_3:17231756-17231775 None:intergenic 45.0%
TCGAGTTACGATCTTTCAGC+TGG - chr2_3:17231755-17231774 Msa0281660:intron 45.0%
! AAGGAGAGTCGGAGACTTTT+GGG + chr2_3:17231892-17231911 None:intergenic 45.0%
ACAGAATTGGGAAGGAGAGT+CGG + chr2_3:17231903-17231922 None:intergenic 45.0%
!! GACTGGTCTGTGTCTCTTAA+AGG - chr2_3:17232145-17232164 Msa0281660:intron 45.0%
TCGTGCTTCTCTCTCAAAGA+AGG + chr2_3:17232473-17232492 None:intergenic 45.0%
CTTCCTCCGCTTAATGAAGT+TGG - chr2_3:17232605-17232624 Msa0281660:intron 45.0%
GTCAGCCCAACTTCATTAAG+CGG + chr2_3:17232614-17232633 None:intergenic 45.0%
!! TGCAGAAGTGTCTTTGAGCA+TGG + chr2_3:17233006-17233025 None:intergenic 45.0%
! CTCAAGGTATCATTCCTTCG+TGG - chr2_3:17233083-17233102 Msa0281660:intron 45.0%
GCTTGAAACGGGAGAAAGAT+AGG - chr2_3:17233172-17233191 Msa0281660:intron 45.0%
TAGCGAGCCCAAGTTATTAG+AGG - chr2_3:17233218-17233237 Msa0281660:intron 45.0%
GAAACAGGATCCAAGCCTTT+GGG + chr2_3:17233631-17233650 None:intergenic 45.0%
ATGCAGCATGTTACCGAAGA+AGG - chr2_3:17233784-17233803 Msa0281660:intron 45.0%
! TACCGAAGAAGGTACAACGT+TGG - chr2_3:17233795-17233814 Msa0281660:intron 45.0%
CACCAACGTTGTACCTTCTT+CGG + chr2_3:17233800-17233819 None:intergenic 45.0%
! AGGTACAACGTTGGTGAAGT+TGG - chr2_3:17233804-17233823 Msa0281660:intron 45.0%
! GGCTTCAATGCCGATTATTG+CGG + chr2_3:17233936-17233955 None:intergenic 45.0%
TCAAACTCGTGTGGCTCAAA+TGG + chr2_3:17234210-17234229 None:intergenic 45.0%
GACTCGTTGTGCTCATCAAA+AGG - chr2_3:17234509-17234528 Msa0281660:CDS 45.0%
TTGGACAATACAGAAGGAGG+AGG + chr2_3:17234670-17234689 None:intergenic 45.0%
AGGTCGTACACGTTCCTTAT+CGG - chr2_3:17234731-17234750 Msa0281660:intron 45.0%
CCGGAGAAAAGGGATATTGT+TGG - chr2_3:17234891-17234910 Msa0281660:intron 45.0%
AACAGTCGTTCACATATGCC+AGG + chr2_3:17235054-17235073 None:intergenic 45.0%
AAGCCTCCTTAAGAGCCTAT+AGG + chr2_3:17235168-17235187 None:intergenic 45.0%
!!! TTTTGCAACAAGGGTGTTGC+TGG - chr2_3:17235196-17235215 Msa0281660:intron 45.0%
AATGTGTCAGACCCAATTGG+AGG - chr2_3:17235501-17235520 Msa0281660:intron 45.0%
!! GCGTGCATAATGGACTTTAG+TGG - chr2_3:17235527-17235546 Msa0281660:intron 45.0%
GGACTTTAGTGGTCTAAGCT+TGG - chr2_3:17235538-17235557 Msa0281660:intron 45.0%
CTTTAGTGGTCTAAGCTTGG+GGG - chr2_3:17235541-17235560 Msa0281660:intron 45.0%
AAGGTGGAGTGAAGTCCAAA+TGG + chr2_3:17235589-17235608 None:intergenic 45.0%
! CCAAAGGGATTTGGTATTCC+TGG + chr2_3:17236021-17236040 None:intergenic 45.0%
CCAGGAATACCAAATCCCTT+TGG - chr2_3:17236018-17236037 Msa0281660:intron 45.0%
AGGACAAAGCCAAAGGGATT+TGG + chr2_3:17236030-17236049 None:intergenic 45.0%
!!! CCCTTTGGCTTTGTCCTTTT+TGG - chr2_3:17236033-17236052 Msa0281660:intron 45.0%
CCCAAAAAGGACAAAGCCAA+AGG + chr2_3:17236037-17236056 None:intergenic 45.0%
GGCACGGTGAATGATACATT+TGG - chr2_3:17236128-17236147 Msa0281660:intron 45.0%
! AGTCAACCCCGTTTTCCTAA+TGG - chr2_3:17236198-17236217 Msa0281660:intron 45.0%
! CTTGCAGGAAAAAGCTTGCT+CGG - chr2_3:17236267-17236286 Msa0281660:intron 45.0%
ACTCCTCTCATGGTCATCAT+TGG + chr2_3:17236315-17236334 None:intergenic 45.0%
GGAGAACCAAACAAGCTTTG+AGG - chr2_3:17236518-17236537 Msa0281660:intron 45.0%
TCAATTCCGGGGTCTACATT+AGG + chr2_3:17236561-17236580 None:intergenic 45.0%
ACAGTTACTGTTCTGACCAC+TGG - chr2_3:17236585-17236604 Msa0281660:intron 45.0%
CCATTTCTGCAGGAAGATTG+AGG + chr2_3:17236638-17236657 None:intergenic 45.0%
CCTCAATCTTCCTGCAGAAA+TGG - chr2_3:17236635-17236654 Msa0281660:intron 45.0%
GCGTATTATGAAGAGTCGGA+AGG - chr2_3:17237458-17237477 Msa0281660:intron 45.0%
ATTTCTCCCACACCCCATAT+TGG - chr2_3:17238028-17238047 Msa0281660:five_prime_UTR 45.0%
CCTATTTCCAATATGGGGTG+TGG + chr2_3:17238038-17238057 None:intergenic 45.0%
CCACACCCCATATTGGAAAT+AGG - chr2_3:17238035-17238054 Msa0281660:five_prime_UTR 45.0%
!! TAATAAGAAAAAAATAAAAA+AGG + chr2_3:17229050-17229069 None:intergenic 5.0%
!! TTGTAAAAAAAAAAAAATAT+CGG - chr2_3:17231163-17231182 Msa0281660:intron 5.0%
AATTAGGGTTTGGGGGAAGG+AGG - chr2_3:17229575-17229594 Msa0281660:intron 50.0%
ATTAGGGTTTGGGGGAAGGA+GGG - chr2_3:17229576-17229595 Msa0281660:intron 50.0%
TCAGAGCTGAACTGAGGTTC+AGG + chr2_3:17229888-17229907 None:intergenic 50.0%
TGAACCTCAGTTCAGCTCTG+AGG - chr2_3:17229887-17229906 Msa0281660:intron 50.0%
TAGTCCTCAGAGCTGAACTG+AGG + chr2_3:17229894-17229913 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_3:17230244-17230263 None:intergenic 50.0%
! TGTGGTTAGTTGTGTGGCTG+CGG + chr2_3:17230682-17230701 None:intergenic 50.0%
GAAGACATGAGACACTGGTC+TGG + chr2_3:17230754-17230773 None:intergenic 50.0%
!! GGATCGTGAGTTGGTTTGCA+CGG - chr2_3:17231205-17231224 Msa0281660:intron 50.0%
!! GATCGTGAGTTGGTTTGCAC+GGG - chr2_3:17231206-17231225 Msa0281660:intron 50.0%
GTAACTCGAGGATCATAGCG+TGG + chr2_3:17231744-17231763 None:intergenic 50.0%
! GAAGGAGAGTCGGAGACTTT+TGG + chr2_3:17231893-17231912 None:intergenic 50.0%
! ATTTTTCTTGGGGGGTGGAG+TGG - chr2_3:17232269-17232288 Msa0281660:intron 50.0%
!! GAGTGGTAAGAGGTGTCATG+TGG - chr2_3:17232286-17232305 Msa0281660:intron 50.0%
TGTTGCGAGAACTTGTGAGG+AGG - chr2_3:17232501-17232520 Msa0281660:intron 50.0%
AGCCCAACTTCATTAAGCGG+AGG + chr2_3:17232611-17232630 None:intergenic 50.0%
!! GCTGACTTGCTTTCGCGATT+TGG - chr2_3:17232628-17232647 Msa0281660:intron 50.0%
GGAGATTGGAATGGGGCATA+TGG - chr2_3:17232953-17232972 Msa0281660:intron 50.0%
GGAAACAGGATCCAAGCCTT+TGG + chr2_3:17233632-17233651 None:intergenic 50.0%
AATACAGAAGGAGGAGGAGG+AGG + chr2_3:17234664-17234683 None:intergenic 50.0%
GACAATACAGAAGGAGGAGG+AGG + chr2_3:17234667-17234686 None:intergenic 50.0%
AATGTCTGCAGCCGGAGAAA+AGG - chr2_3:17234880-17234899 Msa0281660:intron 50.0%
ATGTCTGCAGCCGGAGAAAA+GGG - chr2_3:17234881-17234900 Msa0281660:intron 50.0%
TGAGCTGCATGACAAGTACC+TGG - chr2_3:17235033-17235052 Msa0281660:intron 50.0%
ATGCACGCACACCTCCAATT+GGG + chr2_3:17235515-17235534 None:intergenic 50.0%
TATGCACGCACACCTCCAAT+TGG + chr2_3:17235516-17235535 None:intergenic 50.0%
! TTGGAGGTGTGCGTGCATAA+TGG - chr2_3:17235517-17235536 Msa0281660:intron 50.0%
CGACTTTCCAGTAACATGCG+TGG + chr2_3:17235727-17235746 None:intergenic 50.0%
!! GCTTTTTCCTGCAAGCAACC+AGG + chr2_3:17236262-17236281 None:intergenic 50.0%
GTGCCAATGATGACCATGAG+AGG - chr2_3:17236309-17236328 Msa0281660:intron 50.0%
!! CTGTTCTGACCACTGGTTTC+TGG - chr2_3:17236592-17236611 Msa0281660:intron 50.0%
GTAACTAGGCCAGAAACCAG+TGG + chr2_3:17236604-17236623 None:intergenic 50.0%
TTCTCATCCACAGGAGGAAG+AGG + chr2_3:17237378-17237397 None:intergenic 50.0%
CGCACTCCATCACTAACTGT+TGG + chr2_3:17237494-17237513 None:intergenic 50.0%
ATGGAGTGCGTTGAGCAGTT+AGG - chr2_3:17237504-17237523 Msa0281660:intron 50.0%
GCAGTTAGGCCGCATGTTTA+AGG - chr2_3:17237518-17237537 Msa0281660:intron 50.0%
CTTGATCTCTCGAGACTACC+TGG - chr2_3:17237664-17237683 Msa0281660:intron 50.0%
!! CTCCATATCCAAGTATCGGC+TGG - chr2_3:17237868-17237887 Msa0281660:intron 50.0%
AGCCAGCCGATACTTGGATA+TGG + chr2_3:17237873-17237892 None:intergenic 50.0%
TACAGTAGCCAGCCGATACT+TGG + chr2_3:17237879-17237898 None:intergenic 50.0%
GGGTCGGCTACATGGATCAA+AGG + chr2_3:17230228-17230247 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2_3:17230236-17230255 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_3:17230235-17230254 Msa0281660:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_3:17230236-17230255 Msa0281660:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_3:17230242-17230261 Msa0281660:intron 55.0%
CTCACCACGTCCAATCCCAA+AGG + chr2_3:17230958-17230977 None:intergenic 55.0%
AGCGTGCCGTGGAACAATAG+TGG - chr2_3:17231089-17231108 Msa0281660:intron 55.0%
TGCGAGAACTTGTGAGGAGG+TGG - chr2_3:17232504-17232523 Msa0281660:intron 55.0%
GCGAGAACTTGTGAGGAGGT+GGG - chr2_3:17232505-17232524 Msa0281660:intron 55.0%
GTGGCATTCATTACAGGCGG+AGG - chr2_3:17233146-17233165 Msa0281660:intron 55.0%
!! AGGCGGAGGAGTGCTTGAAA+CGG - chr2_3:17233160-17233179 Msa0281660:intron 55.0%
GGTCTAAGCTTGGGGGTTCA+TGG - chr2_3:17235548-17235567 Msa0281660:intron 55.0%
CATCTTGCCTGGTTGCTTGC+AGG - chr2_3:17236252-17236271 Msa0281660:intron 55.0%
! GCAGGAAAAAGCTTGCTCGG+AGG - chr2_3:17236270-17236289 Msa0281660:intron 55.0%
GCAGATTCCTCTTCCTCCTG+TGG - chr2_3:17237368-17237387 Msa0281660:five_prime_UTR 55.0%
GTTTGCGCAGCCTGATGTCA+AGG - chr2_3:17237619-17237638 Msa0281660:intron 55.0%
TTGGGGGGTGGAGTGGTAAG+AGG - chr2_3:17232276-17232295 Msa0281660:intron 60.0%
!! GGCGGAGGAGTGCTTGAAAC+GGG - chr2_3:17233161-17233180 Msa0281660:intron 60.0%
TGGGCTCGCTACTAGAGTGC+AGG + chr2_3:17233209-17233228 None:intergenic 60.0%
ACAGAAGGAGGAGGAGGAGG+AGG + chr2_3:17234661-17234680 None:intergenic 60.0%
TCGCAGTTGCTGCCGGAGGA+GGG + chr2_3:17231411-17231430 None:intergenic 65.0%
AGGAGGAGGAGGAGGAGGAG+GGG + chr2_3:17234653-17234672 None:intergenic 65.0%
GAGGAGGAGGAGGAGGAGGA+GGG + chr2_3:17234654-17234673 None:intergenic 65.0%
GAAGGAGGAGGAGGAGGAGG+AGG + chr2_3:17234658-17234677 None:intergenic 65.0%
!! TCGCAGTCGCGCTGGCTGAG+AGG + chr2_3:17231374-17231393 None:intergenic 70.0%
CCACCTCTCACGCCCTCCTC+CGG - chr2_3:17231396-17231415 Msa0281660:intron 70.0%
GTCGCAGTTGCTGCCGGAGG+AGG + chr2_3:17231412-17231431 None:intergenic 70.0%
AGCGTCGCAGTTGCTGCCGG+AGG + chr2_3:17231415-17231434 None:intergenic 70.0%
!! GGGAGCGTCGCAGTTGCTGC+CGG + chr2_3:17231418-17231437 None:intergenic 70.0%
AGGAGGAGGAGGAGGAGGGG+GGG + chr2_3:17234650-17234669 None:intergenic 70.0%
GAGGAGGAGGAGGAGGAGGG+GGG + chr2_3:17234651-17234670 None:intergenic 70.0%
GGAGGAGGAGGAGGAGGAGG+GGG + chr2_3:17234652-17234671 None:intergenic 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr2_3:17234652-17234671 None:intergenic 70.0%
AGGTGGCGTCGCAGTCGCGC+TGG + chr2_3:17231382-17231401 None:intergenic 75.0%
! CCGGAGGAGGGCGTGAGAGG+TGG + chr2_3:17231399-17231418 None:intergenic 75.0%
! CTGCCGGAGGAGGGCGTGAG+AGG + chr2_3:17231402-17231421 None:intergenic 75.0%
AGGAGGAGGAGGAGGGGGGG+GGG + chr2_3:17234647-17234666 None:intergenic 75.0%
GAGGAGGAGGAGGAGGGGGG+GGG + chr2_3:17234648-17234667 None:intergenic 75.0%
GGAGGAGGAGGAGGAGGGGG+GGG + chr2_3:17234649-17234668 None:intergenic 75.0%
! AGGAGGAGGAGGGGGGGGGG+GGG + chr2_3:17234644-17234663 None:intergenic 80.0%
! GAGGAGGAGGAGGGGGGGGG+GGG + chr2_3:17234645-17234664 None:intergenic 80.0%
! GGAGGAGGAGGAGGGGGGGG+GGG + chr2_3:17234646-17234665 None:intergenic 80.0%
! AGGAGGAGGGGGGGGGGGGG+GGG + chr2_3:17234641-17234660 None:intergenic 85.0%
! GAGGAGGAGGGGGGGGGGGG+GGG + chr2_3:17234642-17234661 None:intergenic 85.0%
! GGAGGAGGAGGGGGGGGGGG+GGG + chr2_3:17234643-17234662 None:intergenic 85.0%
! AGGAGGGGGGGGGGGGGGGG+GGG + chr2_3:17234638-17234657 None:intergenic 90.0%
! GAGGAGGGGGGGGGGGGGGG+GGG + chr2_3:17234639-17234658 None:intergenic 90.0%
! GGAGGAGGGGGGGGGGGGGG+GGG + chr2_3:17234640-17234659 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234635-17234654 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234636-17234655 None:intergenic 95.0%
! GGAGGGGGGGGGGGGGGGGG+GGG + chr2_3:17234637-17234656 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 17229006 17238149 17229006 ID=Msa0281660;Name=Msa0281660
chr2_3 mRNA 17229006 17238149 17229006 ID=Msa0281660-mRNA-1;Parent=Msa0281660;Name=Msa0281660-mRNA-1;_AED=0.10;_eAED=0.10;_QI=221|1|1|1|0.94|0.9|20|419|742
chr2_3 exon 17229006 17229526 17229006 ID=Msa0281660-mRNA-1:exon:7122;Parent=Msa0281660-mRNA-1
chr2_3 exon 17229616 17229783 17229616 ID=Msa0281660-mRNA-1:exon:7121;Parent=Msa0281660-mRNA-1
chr2_3 exon 17229895 17230113 17229895 ID=Msa0281660-mRNA-1:exon:7120;Parent=Msa0281660-mRNA-1
chr2_3 exon 17230249 17230392 17230249 ID=Msa0281660-mRNA-1:exon:7119;Parent=Msa0281660-mRNA-1
chr2_3 exon 17230499 17230660 17230499 ID=Msa0281660-mRNA-1:exon:7118;Parent=Msa0281660-mRNA-1
chr2_3 exon 17230761 17230881 17230761 ID=Msa0281660-mRNA-1:exon:7117;Parent=Msa0281660-mRNA-1
chr2_3 exon 17231690 17231745 17231690 ID=Msa0281660-mRNA-1:exon:7116;Parent=Msa0281660-mRNA-1
chr2_3 exon 17231834 17231983 17231834 ID=Msa0281660-mRNA-1:exon:7115;Parent=Msa0281660-mRNA-1
chr2_3 exon 17232056 17232142 17232056 ID=Msa0281660-mRNA-1:exon:7114;Parent=Msa0281660-mRNA-1
chr2_3 exon 17232229 17232264 17232229 ID=Msa0281660-mRNA-1:exon:7113;Parent=Msa0281660-mRNA-1
chr2_3 exon 17233303 17233365 17233303 ID=Msa0281660-mRNA-1:exon:7112;Parent=Msa0281660-mRNA-1
chr2_3 exon 17233489 17233569 17233489 ID=Msa0281660-mRNA-1:exon:7111;Parent=Msa0281660-mRNA-1
chr2_3 exon 17233657 17233746 17233657 ID=Msa0281660-mRNA-1:exon:7110;Parent=Msa0281660-mRNA-1
chr2_3 exon 17233916 17233993 17233916 ID=Msa0281660-mRNA-1:exon:7109;Parent=Msa0281660-mRNA-1
chr2_3 exon 17234067 17234270 17234067 ID=Msa0281660-mRNA-1:exon:7108;Parent=Msa0281660-mRNA-1
chr2_3 exon 17234352 17234399 17234352 ID=Msa0281660-mRNA-1:exon:7107;Parent=Msa0281660-mRNA-1
chr2_3 exon 17234506 17234691 17234506 ID=Msa0281660-mRNA-1:exon:7106;Parent=Msa0281660-mRNA-1
chr2_3 exon 17237036 17237135 17237036 ID=Msa0281660-mRNA-1:exon:7105;Parent=Msa0281660-mRNA-1
chr2_3 exon 17237227 17237388 17237227 ID=Msa0281660-mRNA-1:exon:7104;Parent=Msa0281660-mRNA-1
chr2_3 exon 17237957 17238149 17237957 ID=Msa0281660-mRNA-1:exon:7103;Parent=Msa0281660-mRNA-1
chr2_3 five_prime_UTR 17237957 17238149 17237957 ID=Msa0281660-mRNA-1:five_prime_utr;Parent=Msa0281660-mRNA-1
chr2_3 five_prime_UTR 17237361 17237388 17237361 ID=Msa0281660-mRNA-1:five_prime_utr;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17237227 17237360 17237227 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17237036 17237135 17237036 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17234506 17234691 17234506 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17234352 17234399 17234352 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17234067 17234270 17234067 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17233916 17233993 17233916 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17233657 17233746 17233657 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17233489 17233569 17233489 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17233303 17233365 17233303 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17232229 17232264 17232229 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17232056 17232142 17232056 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17231834 17231983 17231834 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17231690 17231745 17231690 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17230761 17230881 17230761 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17230499 17230660 17230499 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17230249 17230392 17230249 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17229895 17230113 17229895 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17229616 17229783 17229616 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 CDS 17229425 17229526 17229425 ID=Msa0281660-mRNA-1:cds;Parent=Msa0281660-mRNA-1
chr2_3 three_prime_UTR 17229006 17229424 17229006 ID=Msa0281660-mRNA-1:three_prime_utr;Parent=Msa0281660-mRNA-1
Gene Sequence

>Msa0281660

ATGAGTGAACGGAAGACTATTGATTTAGAGCAAGGATGGGATTTTATGCTGAAGGGAATACAGAAGCTGAAGAATATTCTGGAAGGGTTACCTGAACCTCAGTTCAGCTCTGAGGACTATATGATGCTATACACAACTATATATAATATGTGTACTCAGAAGCCTCCAAATGACTATTCCCAACCGCTGTATGATAAGTACAGGGAGGCATTTGAGGAGTACATCTTATCAACTGTATTACCTTCTTTGAGAGAGAAGCACGATGAATTTATGTTGCGAGAACTTGTGAGGAGGTGGGCTAACCATAAAATCATGGTTAGATGGCTTTCTCGTTTCTTTCACTATTTGGATCGATACTTTATTGCTCGGAGGTCACTTCCTCCGCTTAATGAAGTTGGGCTGACTTGCTTTCGCGATTTGGTTTACAAGGAAGTAAATGGGAAAGTGAGAGATGCCGTGATTTCTCTTATTGATCAAGAACGTGAAGGAGAGCAGATCGATCGAGCTCTGATAAAAAATGTATTAGATATATTTGTGGAGATTGGAATGGGGCATATGGATCACTATGAAAATGATTTTGAAACTGCCATGCTCAAAGACACTTCTGCATATTATTCTCGAAAGGCTTCAAACTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGCGGAGGAGTGCTTGAAACGGGAGAAAGATAGGGTTGCTAATTACCTGCACTCTAGTAGCGAGCCCAAGTTATTAGAGAAAGTTCAACATGAGCTTTTATCTGTGTATGCAAACCAACTTCTTGAAAAAGAACATTCTGGATGTCATGCATTACTTAGAGATGACAAGGTTGAAGACTTGTCAAGGATGTTCAGACTCTTTTCTAAAATACCCAAAGGCTTGGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACCGAAGAAGGTACAACGTTGGTGAAGTTGGCTGAAGATGCAGCAAGTAACAAGAAGCCGGAGAAAAGGGATATTGTTGGGTTACAAGAGCAGGTTTTTGTTCGAAAAGTGATTGAGCTGCATGACAAGTACCTGGCATATGTGAACGACTGTTTCCAGAATCATACTCTATTCCACAAGGCTCTTAAGGAGGCTTTTGAGATATTTTGCAACAAGGGTGTTGCTGGAAGCTCAAGTGCCGAACTGCTTGCCACTTTTTGTGATAATATTCTCAAGAAAGGCGGAAGTGAAAAATTGAGTGATGAAGCAATTGAAGAAACACTTGAGAAGGTTGTCAAGCTACTTGCTTATATAAGTGACAAAGATTTGTTTGCCGAATTTTATAGGAAAAAGCTTGCTCGGAGGCTTCTTTTTGATAAGAGTGCCAATGATGACCATGAGAGGAGTATTTTAACAAAATTGAAGCAACAATGTGGTGGTCAATTTACTTCAAAGATGGAAGGAATGGTTACAGATTTGACACTGGCAAAGGAGAACCAAACAAGCTTTGAGGAATATTTAAAAAATAATCCTAATGTAGACCCCGGAATTGACTTGACAGTTACTGTTCTGACCACTGGTTTCTGGCCTAGTTACAAATCTTTTGACCTCAATCTTCCTGCAGAAATGGTTAAGTGTGTAGAAGTTTTCAAGGAGTTTTATCAAACTAAAACTAAGCACAGAAAACTTACTTGGATTTATTCCTTGGGTACCTGCAATATAAGTGGGAAATTTGAACCAAAAACCATGGAACTGATTGTGACTACTTACCAGGCTTCAGCATTGCTTCTTTTCAATTCCTCAGATAGACTGAGTTATTCTGAGATAATGGCTCAGTTGAACTTAAACGATGATGATGTTATTAGACTTCTTCACTCCTTATCATGTGCCAAGTACAAGATTCTTAACAAGGAACCAAGCACGAAAGCAATATTACCTACCGATTATTTTGAATTTAATTCAAAATTTACAGACAAAATGAGGAGGATCAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAAAAAGTTATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGGAGTGCGTTGAGCAGTTAGGCCGCATGTTTAAGCCTGATGTCAAGGCAATTAAGAAGCGGATTGAAGACTTGATCTCTCGAGACTACCTGGAAAGAGACAAAGATAATGCAAATTTGTTCAAGTACTTGGCTTGA

Protein sequence

>Msa0281660

MSERKTIDLEQGWDFMLKGIQKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPNDYSQPLYDKYREAFEEYILSTVLPSLREKHDEFMLRELVRRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKEVNGKVRDAVISLIDQEREGEQIDRALIKNVLDIFVEIGMGHMDHYENDFETAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVANYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPKGLDPVSSIFKQHVTEEGTTLVKLAEDAASNKKPEKRDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLKNNPNVDPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMAQLNLNDDDVIRLLHSLSCAKYKILNKEPSTKAILPTDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLNYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFKYLA*