Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0243300 | XP_013463305.1 | 95.398 | 1043 | 47 | 1 | 1 | 1043 | 1 | 1042 | 0.0 | 2030 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0243300 | sp|Q9SIW2|CHR35_ARATH | 56.793 | 817 | 281 | 14 | 244 | 1043 | 127 | 888 | 0.0 | 904 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0243300 | A0A072V6S6 | 95.398 | 1043 | 47 | 1 | 1 | 1043 | 1 | 1042 | 0.0 | 2030 |
Gene ID | Type | Classification |
---|---|---|
Msa0243300 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0243300 | Msa0281690 | 0.938312 | 8.286974e-99 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0243300 | MtrunA17_Chr2g0296421 | 95.398 | 1043 | 47 | 1 | 1 | 1043 | 1 | 1042 | 0.0 | 2030 |
Msa0243300 | MtrunA17_Chr8g0352361 | 80.451 | 798 | 136 | 8 | 250 | 1043 | 112 | 893 | 0.0 | 1288 |
Msa0243300 | MtrunA17_Chr8g0352361 | 52.147 | 163 | 53 | 5 | 1 | 157 | 12 | 155 | 1.57e-34 | 142 |
Msa0243300 | MtrunA17_Chr1g0191141 | 30.931 | 763 | 408 | 21 | 340 | 1002 | 315 | 1058 | 2.48e-93 | 321 |
Msa0243300 | MtrunA17_Chr7g0224051 | 31.457 | 693 | 388 | 19 | 390 | 1002 | 387 | 1072 | 2.40e-88 | 308 |
Msa0243300 | MtrunA17_Chr3g0114161 | 31.304 | 690 | 376 | 21 | 399 | 1002 | 526 | 1203 | 5.06e-87 | 305 |
Msa0243300 | MtrunA17_Chr7g0225791 | 31.133 | 697 | 358 | 20 | 388 | 1002 | 584 | 1240 | 1.11e-85 | 302 |
Msa0243300 | MtrunA17_Chr4g0047081 | 30.482 | 643 | 344 | 17 | 433 | 1002 | 578 | 1190 | 3.24e-81 | 288 |
Msa0243300 | MtrunA17_Chr5g0437621 | 29.343 | 685 | 400 | 19 | 395 | 1002 | 582 | 1259 | 2.98e-80 | 286 |
Msa0243300 | MtrunA17_Chr7g0233021 | 31.562 | 640 | 348 | 22 | 433 | 1002 | 567 | 1186 | 2.27e-78 | 280 |
Msa0243300 | MtrunA17_Chr7g0232971 | 30.650 | 646 | 349 | 19 | 433 | 1002 | 630 | 1252 | 7.26e-78 | 279 |
Msa0243300 | MtrunA17_Chr7g0233031 | 29.063 | 640 | 358 | 18 | 433 | 1002 | 586 | 1199 | 1.04e-71 | 260 |
Msa0243300 | MtrunA17_Chr7g0232991 | 29.443 | 557 | 308 | 11 | 514 | 1002 | 75 | 614 | 1.28e-66 | 237 |
Msa0243300 | MtrunA17_Chr7g0233001 | 32.525 | 495 | 272 | 15 | 550 | 1002 | 1 | 475 | 2.14e-66 | 233 |
Msa0243300 | MtrunA17_Chr2g0320781 | 39.407 | 236 | 126 | 9 | 763 | 988 | 5 | 233 | 1.45e-35 | 135 |
Msa0243300 | MtrunA17_Chr3g0137091 | 24.805 | 512 | 320 | 14 | 512 | 1000 | 289 | 758 | 6.61e-32 | 135 |
Msa0243300 | MtrunA17_Chr4g0052341 | 25.486 | 514 | 306 | 17 | 514 | 1001 | 747 | 1209 | 1.58e-29 | 127 |
Msa0243300 | MtrunA17_Chr5g0394201 | 25.773 | 485 | 314 | 16 | 508 | 985 | 359 | 804 | 8.42e-29 | 125 |
Msa0243300 | MtrunA17_Chr5g0393461 | 24.725 | 546 | 335 | 18 | 500 | 1000 | 172 | 686 | 1.40e-28 | 124 |
Msa0243300 | MtrunA17_Chr8g0384531 | 25.328 | 533 | 326 | 16 | 505 | 994 | 377 | 880 | 4.60e-28 | 122 |
Msa0243300 | MtrunA17_Chr5g0442141 | 25.824 | 546 | 322 | 19 | 509 | 1027 | 614 | 1103 | 1.97e-27 | 120 |
Msa0243300 | MtrunA17_Chr1g0190391 | 27.907 | 215 | 141 | 4 | 506 | 707 | 576 | 789 | 3.28e-26 | 116 |
Msa0243300 | MtrunA17_Chr1g0205891 | 25.309 | 486 | 316 | 17 | 508 | 985 | 372 | 818 | 3.29e-26 | 116 |
Msa0243300 | MtrunA17_Chr1g0163011 | 23.870 | 553 | 354 | 17 | 492 | 994 | 175 | 710 | 5.05e-26 | 115 |
Msa0243300 | MtrunA17_Chr3g0095091 | 25.049 | 515 | 309 | 18 | 509 | 997 | 568 | 1031 | 2.29e-25 | 114 |
Msa0243300 | MtrunA17_Chr5g0403921 | 24.486 | 486 | 328 | 14 | 509 | 984 | 181 | 637 | 9.95e-24 | 107 |
Msa0243300 | MtrunA17_Chr1g0183681 | 23.992 | 496 | 321 | 14 | 533 | 998 | 410 | 879 | 4.49e-23 | 106 |
Msa0243300 | MtrunA17_Chr4g0066651 | 24.000 | 550 | 332 | 21 | 508 | 1023 | 985 | 1482 | 3.06e-21 | 100 |
Msa0243300 | MtrunA17_Chr4g0040301 | 36.364 | 176 | 96 | 4 | 850 | 1016 | 381 | 549 | 1.19e-19 | 94.7 |
Msa0243300 | MtrunA17_Chr7g0248031 | 25.743 | 505 | 295 | 20 | 508 | 979 | 990 | 1447 | 3.91e-18 | 90.9 |
Msa0243300 | MtrunA17_Chr1g0190381 | 34.177 | 158 | 95 | 2 | 850 | 998 | 189 | 346 | 1.36e-17 | 87.4 |
Msa0243300 | MtrunA17_Chr7g0232121 | 22.792 | 566 | 341 | 24 | 512 | 1034 | 39 | 551 | 1.58e-17 | 88.2 |
Msa0243300 | MtrunA17_Chr1g0175191 | 31.351 | 185 | 109 | 4 | 811 | 985 | 1017 | 1193 | 9.10e-16 | 82.8 |
Msa0243300 | MtrunA17_Chr1g0168031 | 33.333 | 144 | 91 | 2 | 852 | 995 | 990 | 1128 | 5.09e-13 | 73.9 |
Msa0243300 | MtrunA17_Chr2g0281601 | 37.398 | 123 | 72 | 2 | 863 | 985 | 1146 | 1263 | 2.92e-12 | 71.2 |
Msa0243300 | MtrunA17_Chr7g0224021 | 35.632 | 87 | 43 | 2 | 506 | 581 | 25 | 109 | 1.02e-11 | 63.2 |
Msa0243300 | MtrunA17_Chr1g0212331 | 33.858 | 127 | 78 | 3 | 861 | 986 | 880 | 1001 | 2.22e-11 | 68.2 |
Msa0243300 | MtrunA17_Chr2g0320751 | 30.667 | 150 | 97 | 3 | 847 | 995 | 848 | 991 | 2.44e-11 | 68.2 |
Msa0243300 | MtrunA17_Chr7g0255821 | 33.113 | 151 | 92 | 4 | 840 | 986 | 639 | 784 | 2.90e-11 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0243300 | AT2G16390.2 | 56.829 | 820 | 276 | 15 | 244 | 1043 | 130 | 891 | 0.0 | 904 |
Msa0243300 | AT2G16390.1 | 56.793 | 817 | 281 | 14 | 244 | 1043 | 127 | 888 | 0.0 | 904 |
Msa0243300 | AT2G21450.1 | 54.627 | 670 | 281 | 5 | 394 | 1043 | 148 | 814 | 0.0 | 754 |
Msa0243300 | AT2G21450.3 | 54.627 | 670 | 281 | 5 | 394 | 1043 | 57 | 723 | 0.0 | 754 |
Msa0243300 | AT2G21450.2 | 54.627 | 670 | 281 | 5 | 394 | 1043 | 155 | 821 | 0.0 | 754 |
Msa0243300 | AT1G05490.1 | 30.398 | 704 | 379 | 22 | 385 | 1002 | 675 | 1353 | 7.56e-90 | 315 |
Msa0243300 | AT3G42670.2 | 28.446 | 682 | 404 | 15 | 395 | 1002 | 539 | 1210 | 3.38e-81 | 289 |
Msa0243300 | AT3G42670.3 | 28.446 | 682 | 404 | 15 | 395 | 1002 | 539 | 1210 | 3.38e-81 | 289 |
Msa0243300 | AT3G42670.1 | 28.446 | 682 | 404 | 15 | 395 | 1002 | 539 | 1210 | 3.38e-81 | 289 |
Msa0243300 | AT3G42670.4 | 28.404 | 683 | 405 | 14 | 395 | 1002 | 539 | 1212 | 3.80e-81 | 289 |
Msa0243300 | AT3G24340.1 | 31.644 | 651 | 378 | 15 | 397 | 1002 | 453 | 1081 | 3.52e-80 | 285 |
Msa0243300 | AT5G20420.1 | 29.688 | 704 | 409 | 21 | 390 | 1019 | 542 | 1233 | 4.24e-79 | 283 |
Msa0243300 | AT3G32330.1 | 37.283 | 346 | 175 | 4 | 490 | 826 | 1 | 313 | 2.85e-64 | 221 |
Msa0243300 | AT3G32280.1 | 35.870 | 276 | 128 | 2 | 431 | 706 | 248 | 474 | 1.71e-50 | 186 |
Msa0243300 | AT1G08600.4 | 26.598 | 579 | 322 | 17 | 506 | 998 | 712 | 1273 | 3.76e-45 | 178 |
Msa0243300 | AT1G08600.3 | 26.598 | 579 | 322 | 17 | 506 | 998 | 712 | 1273 | 3.76e-45 | 178 |
Msa0243300 | AT1G08600.2 | 26.598 | 579 | 322 | 17 | 506 | 998 | 712 | 1273 | 3.76e-45 | 178 |
Msa0243300 | AT1G08600.1 | 26.170 | 577 | 306 | 18 | 506 | 998 | 712 | 1252 | 2.40e-38 | 156 |
Msa0243300 | AT3G31900.1 | 32.734 | 278 | 127 | 5 | 431 | 708 | 153 | 370 | 6.00e-38 | 147 |
Msa0243300 | AT5G63950.1 | 25.796 | 597 | 347 | 20 | 464 | 1006 | 330 | 884 | 5.85e-29 | 125 |
Msa0243300 | AT5G44800.1 | 25.144 | 521 | 321 | 16 | 515 | 1014 | 692 | 1164 | 6.13e-29 | 126 |
Msa0243300 | AT4G31900.2 | 25.094 | 530 | 319 | 16 | 512 | 1023 | 184 | 653 | 8.38e-29 | 125 |
Msa0243300 | AT4G31900.3 | 25.094 | 530 | 319 | 16 | 512 | 1023 | 225 | 694 | 9.27e-29 | 125 |
Msa0243300 | AT4G31900.1 | 25.094 | 530 | 319 | 16 | 512 | 1023 | 225 | 694 | 1.10e-28 | 125 |
Msa0243300 | AT5G63950.2 | 24.958 | 589 | 345 | 19 | 464 | 1006 | 330 | 867 | 4.82e-27 | 119 |
Msa0243300 | AT2G13370.1 | 24.522 | 575 | 326 | 19 | 464 | 986 | 554 | 1072 | 2.20e-26 | 117 |
Msa0243300 | AT2G13370.2 | 24.522 | 575 | 326 | 19 | 464 | 986 | 554 | 1072 | 2.20e-26 | 117 |
Msa0243300 | AT2G13370.3 | 24.522 | 575 | 326 | 19 | 464 | 986 | 554 | 1072 | 2.20e-26 | 117 |
Msa0243300 | AT2G25170.1 | 24.394 | 578 | 359 | 20 | 462 | 1000 | 204 | 742 | 4.55e-26 | 116 |
Msa0243300 | AT2G25170.4 | 24.394 | 578 | 359 | 20 | 462 | 1000 | 204 | 742 | 4.55e-26 | 116 |
Msa0243300 | AT3G06010.1 | 25.361 | 485 | 315 | 17 | 509 | 985 | 400 | 845 | 4.97e-26 | 116 |
Msa0243300 | AT2G25170.2 | 24.394 | 578 | 359 | 20 | 462 | 1000 | 221 | 759 | 5.29e-26 | 116 |
Msa0243300 | AT2G25170.3 | 24.394 | 578 | 359 | 20 | 462 | 1000 | 230 | 768 | 8.27e-26 | 115 |
Msa0243300 | AT5G19310.2 | 25.615 | 488 | 311 | 17 | 508 | 985 | 118 | 563 | 1.00e-24 | 111 |
Msa0243300 | AT5G19310.1 | 25.615 | 488 | 311 | 17 | 508 | 985 | 382 | 827 | 1.86e-24 | 111 |
Msa0243300 | AT2G28290.2 | 24.905 | 526 | 332 | 18 | 509 | 1011 | 751 | 1236 | 6.59e-23 | 107 |
Msa0243300 | AT2G28290.3 | 24.905 | 526 | 332 | 18 | 509 | 1011 | 751 | 1236 | 7.18e-23 | 106 |
Msa0243300 | AT2G28290.4 | 24.905 | 526 | 332 | 18 | 509 | 1011 | 751 | 1236 | 7.18e-23 | 106 |
Msa0243300 | AT2G28290.6 | 24.905 | 526 | 332 | 18 | 509 | 1011 | 752 | 1237 | 7.24e-23 | 106 |
Msa0243300 | AT2G28290.5 | 24.905 | 526 | 332 | 18 | 509 | 1011 | 752 | 1237 | 7.25e-23 | 106 |
Msa0243300 | AT2G28290.1 | 24.905 | 526 | 332 | 18 | 509 | 1011 | 751 | 1236 | 7.37e-23 | 106 |
Msa0243300 | AT2G18760.4 | 24.405 | 504 | 307 | 17 | 533 | 998 | 404 | 871 | 4.48e-22 | 103 |
Msa0243300 | AT2G18760.1 | 24.405 | 504 | 307 | 17 | 533 | 998 | 404 | 871 | 4.48e-22 | 103 |
Msa0243300 | AT2G18760.2 | 24.405 | 504 | 307 | 17 | 533 | 998 | 404 | 871 | 4.48e-22 | 103 |
Msa0243300 | AT2G18760.7 | 24.405 | 504 | 307 | 17 | 533 | 998 | 404 | 871 | 4.48e-22 | 103 |
Msa0243300 | AT2G18760.5 | 24.405 | 504 | 307 | 17 | 533 | 998 | 404 | 871 | 4.48e-22 | 103 |
Msa0243300 | AT2G18760.6 | 24.405 | 504 | 307 | 17 | 533 | 998 | 404 | 871 | 4.48e-22 | 103 |
Msa0243300 | AT2G18760.3 | 24.405 | 504 | 307 | 17 | 533 | 998 | 463 | 930 | 7.30e-22 | 103 |
Msa0243300 | AT1G03750.1 | 36.943 | 157 | 94 | 2 | 844 | 1000 | 523 | 674 | 6.75e-20 | 96.3 |
Msa0243300 | AT2G02090.1 | 21.828 | 536 | 352 | 17 | 512 | 997 | 213 | 731 | 5.96e-19 | 93.2 |
Msa0243300 | AT5G66750.1 | 25.137 | 549 | 348 | 20 | 509 | 1042 | 199 | 699 | 8.06e-19 | 92.8 |
Msa0243300 | AT2G46020.5 | 25.502 | 498 | 304 | 17 | 508 | 979 | 977 | 1433 | 1.79e-18 | 92.4 |
Msa0243300 | AT2G46020.1 | 25.502 | 498 | 304 | 17 | 508 | 979 | 977 | 1433 | 1.79e-18 | 92.4 |
Msa0243300 | AT2G46020.6 | 25.502 | 498 | 304 | 17 | 508 | 979 | 977 | 1433 | 1.79e-18 | 92.4 |
Msa0243300 | AT2G46020.2 | 24.752 | 505 | 300 | 15 | 508 | 979 | 977 | 1434 | 3.08e-18 | 91.7 |
Msa0243300 | AT2G46020.3 | 24.752 | 505 | 300 | 15 | 508 | 979 | 977 | 1434 | 3.08e-18 | 91.7 |
Msa0243300 | AT2G46020.4 | 24.752 | 505 | 300 | 15 | 508 | 979 | 977 | 1434 | 3.08e-18 | 91.7 |
Msa0243300 | AT3G19210.3 | 29.680 | 219 | 128 | 5 | 498 | 704 | 166 | 370 | 5.89e-18 | 90.1 |
Msa0243300 | AT3G19210.3 | 26.531 | 147 | 102 | 2 | 855 | 1000 | 541 | 682 | 7.71e-11 | 67.0 |
Msa0243300 | AT3G19210.1 | 29.680 | 219 | 128 | 5 | 498 | 704 | 166 | 370 | 6.29e-18 | 90.1 |
Msa0243300 | AT3G19210.1 | 26.531 | 147 | 102 | 2 | 855 | 1000 | 541 | 682 | 3.69e-11 | 68.2 |
Msa0243300 | AT3G19210.2 | 29.680 | 219 | 128 | 5 | 498 | 704 | 166 | 370 | 6.33e-18 | 90.1 |
Msa0243300 | AT3G19210.2 | 26.531 | 147 | 102 | 2 | 855 | 1000 | 539 | 680 | 4.33e-11 | 67.8 |
Msa0243300 | AT3G12810.2 | 29.577 | 213 | 126 | 4 | 847 | 1043 | 1069 | 1273 | 8.81e-16 | 83.6 |
Msa0243300 | AT3G12810.1 | 29.577 | 213 | 126 | 4 | 847 | 1043 | 1073 | 1277 | 8.89e-16 | 83.6 |
Msa0243300 | AT5G43530.1 | 37.121 | 132 | 78 | 2 | 864 | 995 | 1126 | 1252 | 1.76e-15 | 82.4 |
Msa0243300 | AT2G44980.1 | 24.390 | 492 | 312 | 22 | 512 | 985 | 51 | 500 | 2.74e-15 | 81.3 |
Msa0243300 | AT1G61140.1 | 33.813 | 139 | 87 | 1 | 864 | 1002 | 1122 | 1255 | 1.02e-12 | 73.2 |
Msa0243300 | AT1G61140.3 | 33.813 | 139 | 87 | 1 | 864 | 1002 | 964 | 1097 | 1.29e-12 | 72.8 |
Msa0243300 | AT1G11100.5 | 36.066 | 122 | 73 | 2 | 864 | 985 | 927 | 1043 | 1.78e-12 | 72.4 |
Msa0243300 | AT1G11100.3 | 36.066 | 122 | 73 | 2 | 864 | 985 | 971 | 1087 | 1.79e-12 | 72.4 |
Msa0243300 | AT1G11100.1 | 36.066 | 122 | 73 | 2 | 864 | 985 | 1070 | 1186 | 1.99e-12 | 72.4 |
Msa0243300 | AT1G11100.4 | 36.066 | 122 | 73 | 2 | 864 | 985 | 1114 | 1230 | 2.06e-12 | 72.4 |
Msa0243300 | AT1G11100.2 | 36.066 | 122 | 73 | 2 | 864 | 985 | 1113 | 1229 | 2.08e-12 | 72.4 |
Msa0243300 | AT3G20010.3 | 33.871 | 124 | 67 | 2 | 867 | 985 | 628 | 741 | 5.16e-11 | 67.4 |
Msa0243300 | AT3G20010.2 | 33.871 | 124 | 67 | 2 | 867 | 985 | 603 | 716 | 5.66e-11 | 67.4 |
Msa0243300 | AT3G20010.1 | 33.600 | 125 | 68 | 2 | 867 | 986 | 894 | 1008 | 8.46e-11 | 67.0 |
Msa0243300 | AT3G20010.5 | 33.600 | 125 | 68 | 2 | 867 | 986 | 894 | 1008 | 8.46e-11 | 67.0 |
Msa0243300 | AT3G20010.7 | 33.600 | 125 | 68 | 2 | 867 | 986 | 894 | 1008 | 8.46e-11 | 67.0 |
Find 204 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCTTGCCTCTAAAATATT+TGG | 0.125276 | 2_2:+20229955 | Msa0243300:CDS |
CGCTTAGAGAGTGGAAAATT+TGG | 0.193521 | 2_2:+20225119 | Msa0243300:CDS |
TCTTTCTTTGTGTTATCTTT+AGG | 0.226098 | 2_2:-20227137 | None:intergenic |
AGGACGCCATTGATGAAATT+TGG | 0.235871 | 2_2:-20223831 | None:intergenic |
TGAAGTCATCATCATTGATT+TGG | 0.260279 | 2_2:+20225616 | Msa0243300:CDS |
TCTGCAATTGGTTTCAAGTC+TGG | 0.267700 | 2_2:-20229782 | None:intergenic |
ATGGAAAATAAGAATGTTAC+TGG | 0.277957 | 2_2:+20225275 | Msa0243300:CDS |
ACATGAGGAAGAAGATAATA+AGG | 0.284394 | 2_2:+20227181 | Msa0243300:CDS |
TCATCTGAATCAATGATAAA+TGG | 0.290481 | 2_2:-20225395 | None:intergenic |
ATGTAAAAGCCCTGTATAAA+AGG | 0.296271 | 2_2:+20230440 | Msa0243300:CDS |
ACATCATAATGTCATAGATT+TGG | 0.300000 | 2_2:+20225304 | Msa0243300:CDS |
TTTCTAGAAAGTCCATTGTT+AGG | 0.301488 | 2_2:+20230412 | Msa0243300:CDS |
GTTTCCATCTTTATAAACTT+TGG | 0.310104 | 2_2:-20229443 | None:intergenic |
AGTCTTTCACACCAGGTAAA+TGG | 0.310452 | 2_2:-20229502 | None:intergenic |
GCAGGAGACTGAACTGGTTT+TGG | 0.312654 | 2_2:-20225887 | None:intergenic |
CTTGTATTGGAACTCAAATA+TGG | 0.319708 | 2_2:-20228265 | None:intergenic |
TTTCCATCTTTATAAACTTT+GGG | 0.324220 | 2_2:-20229442 | None:intergenic |
GTACTGTGATCTTCCTCTTC+TGG | 0.324552 | 2_2:-20230280 | None:intergenic |
TCTTTCTTTGTGTTATCTTC+AGG | 0.325344 | 2_2:-20227224 | None:intergenic |
CTGCAATTGGTTTCAAGTCT+GGG | 0.326657 | 2_2:-20229781 | None:intergenic |
TTTCGAAAATGTGGTTTGAA+TGG | 0.333393 | 2_2:+20230323 | Msa0243300:CDS |
AATACTATCGACTTGGAAAA+AGG | 0.333771 | 2_2:+20229049 | Msa0243300:CDS |
GGATGAAGCAGGGCGTTTAC+TGG | 0.339733 | 2_2:-20223854 | None:intergenic |
ATTACAGTTATCACAGATAA+TGG | 0.340357 | 2_2:-20229216 | None:intergenic |
TCTGTTACTCGTCAAGCTAT+TGG | 0.341013 | 2_2:+20230193 | Msa0243300:CDS |
AGAAGAAGAGTGAGAGAATA+GGG | 0.341513 | 2_2:-20223796 | None:intergenic |
CTCCTAATGCGTTGGACAAT+AGG | 0.350767 | 2_2:-20229473 | None:intergenic |
GATGAAATTTGGAAGCGTTT+AGG | 0.356155 | 2_2:-20223820 | None:intergenic |
TGTGAAAGACTTCTGTGATT+TGG | 0.367803 | 2_2:+20229514 | Msa0243300:CDS |
ATTCAAGTGAGGAAGATGAT+AGG | 0.373070 | 2_2:+20225531 | Msa0243300:CDS |
GGCAATGCAACTTCATGAAA+TGG | 0.373763 | 2_2:-20225866 | None:intergenic |
CTGGCTCATGCTCCAGGATC+TGG | 0.375281 | 2_2:+20228942 | Msa0243300:CDS |
ATAGTAGTGCAGTACCTTGC+TGG | 0.375718 | 2_2:-20229609 | None:intergenic |
GTTTCTTAAGCAATATATCT+TGG | 0.378503 | 2_2:-20229259 | None:intergenic |
GCACACCGAAAAGGATGTTT+TGG | 0.378651 | 2_2:+20225340 | Msa0243300:CDS |
AGCTGTTATACATGATTTGC+GGG | 0.378708 | 2_2:+20229580 | Msa0243300:CDS |
TCACTACATTTCTCTGCAAT+TGG | 0.379021 | 2_2:-20229794 | None:intergenic |
AATGTTATCATTGATTCAAA+TGG | 0.380062 | 2_2:+20225812 | Msa0243300:CDS |
ACCCAGAAAATGCAAATATT+AGG | 0.380882 | 2_2:+20225173 | Msa0243300:CDS |
GTGAGGGTATATCACTGGTT+GGG | 0.382550 | 2_2:+20230131 | Msa0243300:CDS |
AAGAAGAAGAGTGAGAGAAT+AGG | 0.383264 | 2_2:-20223797 | None:intergenic |
ATTCAGTTGAGGAAGATGAT+AGG | 0.385380 | 2_2:+20225729 | Msa0243300:CDS |
ATCAGCTGGTGAGAAGCTTT+TGG | 0.391575 | 2_2:+20229919 | Msa0243300:CDS |
CCGCCCAAAGTTTATAAAGA+TGG | 0.396049 | 2_2:+20229439 | Msa0243300:CDS |
TGCATTCTGGCTCATGCTCC+AGG | 0.404134 | 2_2:+20228936 | Msa0243300:CDS |
ATGTTATCATTGATTCAAAT+GGG | 0.404166 | 2_2:+20225813 | Msa0243300:CDS |
TGGAAAGGTTAGCTATGAAA+TGG | 0.408305 | 2_2:+20229975 | Msa0243300:CDS |
ATGACGGGCTAGAAGATGTT+TGG | 0.408645 | 2_2:+20227303 | Msa0243300:CDS |
TTCTAGAAAGTCCATTGTTA+GGG | 0.412455 | 2_2:+20230413 | Msa0243300:CDS |
GTTATGTTTGTCGCGTTTGT+GGG | 0.414777 | 2_2:+20228220 | Msa0243300:CDS |
GTTTCTTCATCATGATCTGT+TGG | 0.434415 | 2_2:-20225452 | None:intergenic |
TCACCCCGTCTCTCACATCT+TGG | 0.439166 | 2_2:-20229859 | None:intergenic |
AGGAATTAATTTCGAAAATG+TGG | 0.440301 | 2_2:+20230314 | Msa0243300:CDS |
ATCTTCCTCACTTGAATCAA+TGG | 0.440751 | 2_2:-20225525 | None:intergenic |
ATGAATGTCTTTCCAGATCC+TGG | 0.441533 | 2_2:-20228954 | None:intergenic |
AACCTATTGTCCAACGCATT+AGG | 0.441584 | 2_2:+20229471 | Msa0243300:CDS |
TTTGGATGAGGAAGATGATA+AGG | 0.441721 | 2_2:+20225634 | Msa0243300:CDS |
TCATCTAAAATGAGAATTGA+CGG | 0.441909 | 2_2:-20229281 | None:intergenic |
ACCTCTCGTGGTGCTTCCTA+AGG | 0.442095 | 2_2:+20229025 | Msa0243300:CDS |
ACCTGGTGGGAGACCATCCT+GGG | 0.448352 | 2_2:+20228910 | Msa0243300:CDS |
AAATGGAAGGGCTGGAGTCT+TGG | 0.448957 | 2_2:+20229992 | Msa0243300:CDS |
TCTAATGCAGGAGACTGAAC+TGG | 0.453819 | 2_2:-20225893 | None:intergenic |
ACGCTTCCAAATTTCATCAA+TGG | 0.455840 | 2_2:+20223825 | Msa0243300:exon |
GGTTATGTTTGTCGCGTTTG+TGG | 0.457173 | 2_2:+20228219 | Msa0243300:CDS |
ACCACGAGAGGTCGTGCATC+GGG | 0.459021 | 2_2:-20229014 | None:intergenic |
CATATTTGAGTTCCAATACA+AGG | 0.465416 | 2_2:+20228266 | Msa0243300:CDS |
AAAGACAAAGGTAATTATGT+TGG | 0.466178 | 2_2:+20227155 | Msa0243300:CDS |
ACCAGTGTCTAACCTTGTAT+TGG | 0.466307 | 2_2:-20228278 | None:intergenic |
AACCTGGTGGGAGACCATCC+TGG | 0.468533 | 2_2:+20228909 | Msa0243300:CDS |
TAATGTCATAGATTTGGATT+CGG | 0.469260 | 2_2:+20225310 | Msa0243300:CDS |
TTCTCCTCCATGGTAAGCAT+TGG | 0.471176 | 2_2:-20227081 | None:intergenic |
ATGAAGTTAAGACAATAAAG+AGG | 0.472373 | 2_2:+20229708 | Msa0243300:CDS |
CAAGTCGATAGTATTCCCTT+AGG | 0.474320 | 2_2:-20229041 | None:intergenic |
AAGGTACTGCACTACTATAA+AGG | 0.474619 | 2_2:+20229614 | Msa0243300:CDS |
TTCAGATGAGGAGGATGATA+AGG | 0.476090 | 2_2:+20225409 | Msa0243300:CDS |
AAACACTTTGCAGAAGGATC+CGG | 0.477672 | 2_2:+20229541 | Msa0243300:CDS |
CCCCAGGATGGTCTCCCACC+AGG | 0.479756 | 2_2:-20228911 | None:intergenic |
CTTTCCGACCAGGCCAGAAA+AGG | 0.480032 | 2_2:+20230221 | Msa0243300:CDS |
CTTACAATCATTTCTAATGC+AGG | 0.480541 | 2_2:-20225905 | None:intergenic |
ATTGGCCGTGCTTTCCGACC+AGG | 0.480741 | 2_2:+20230211 | Msa0243300:CDS |
AAAGCTTCTCACCAGCTGAT+TGG | 0.482830 | 2_2:-20229916 | None:intergenic |
TAGCTATGAAATGGAAGGGC+TGG | 0.483976 | 2_2:+20229984 | Msa0243300:CDS |
TGACAGTAGATCACAACAAT+TGG | 0.483985 | 2_2:+20229130 | Msa0243300:CDS |
AGGATCTGGAAAGACATTCA+TGG | 0.485077 | 2_2:+20228956 | Msa0243300:CDS |
CTAAGGGAATACTATCGACT+TGG | 0.486814 | 2_2:+20229042 | Msa0243300:CDS |
GAACTTATATGTCTGAATCA+TGG | 0.492636 | 2_2:+20228748 | Msa0243300:CDS |
TGCCTCTAAAATATTTGGAA+AGG | 0.493636 | 2_2:+20229960 | Msa0243300:CDS |
AGTAAACGCCCTGCTTCATC+CGG | 0.495513 | 2_2:+20223856 | Msa0243300:CDS |
ACTGTTGGTATCCTAAGAAA+AGG | 0.496655 | 2_2:-20229187 | None:intergenic |
GATCTGCATGTTCTCCTCCA+TGG | 0.504352 | 2_2:-20227091 | None:intergenic |
ATGATGATGACTTCATGAAA+TGG | 0.505154 | 2_2:-20225608 | None:intergenic |
TTCATTTGATTTGCATGTCG+AGG | 0.507539 | 2_2:-20228849 | None:intergenic |
TCTCCTCCATGGTAAGCATT+GGG | 0.510319 | 2_2:-20227080 | None:intergenic |
AAAGACAAAGGTCTTTATGT+TGG | 0.511523 | 2_2:+20227242 | Msa0243300:CDS |
CCAGGAATTTCGCCTGAAGA+AGG | 0.513792 | 2_2:+20224996 | Msa0243300:intron |
ATAACATTTGAAATTGCATA+CGG | 0.515415 | 2_2:-20225092 | None:intergenic |
TCATAGATTTGGATTCGGAC+GGG | 0.516289 | 2_2:+20225315 | Msa0243300:CDS |
AATGTAATACCGGATGAAGC+AGG | 0.517228 | 2_2:-20223865 | None:intergenic |
TTCAGTTGAGGAAGATGATA+GGG | 0.520994 | 2_2:+20225730 | Msa0243300:CDS |
GACGAGTAACAGACGGGTTG+AGG | 0.521054 | 2_2:-20230183 | None:intergenic |
TAGATGAGGGACACACTCCT+AGG | 0.521780 | 2_2:+20229297 | Msa0243300:CDS |
CGAACCAAGATGTGAGAGAC+GGG | 0.522137 | 2_2:+20229855 | Msa0243300:CDS |
TAGCTGTTATACATGATTTG+CGG | 0.523136 | 2_2:+20229579 | Msa0243300:CDS |
GGTGAGGGTATATCACTGGT+TGG | 0.524182 | 2_2:+20230130 | Msa0243300:CDS |
TGAGGGTATATCACTGGTTG+GGG | 0.525743 | 2_2:+20230132 | Msa0243300:CDS |
ATGACTTCATGAAATGGTGC+TGG | 0.526184 | 2_2:-20225602 | None:intergenic |
GAGGGAGATGGCAATGGCAA+TGG | 0.526773 | 2_2:+20227325 | Msa0243300:CDS |
CATAGATTTGGATTCGGACG+GGG | 0.528458 | 2_2:+20225316 | Msa0243300:CDS |
TTATAAACTTTGGGCGGACA+AGG | 0.528879 | 2_2:-20229433 | None:intergenic |
GGAGCACTCCCTTTGTTCAG+TGG | 0.530923 | 2_2:-20230047 | None:intergenic |
TTCAAGTGAGGAAGATGATA+GGG | 0.531455 | 2_2:+20225532 | Msa0243300:CDS |
CATCATCATTGATTTGGATG+AGG | 0.532601 | 2_2:+20225622 | Msa0243300:CDS |
GGTTGAAAACACTTTGCAGA+AGG | 0.533466 | 2_2:+20229535 | Msa0243300:CDS |
AGAATCGTCCACTGAACAAA+GGG | 0.535424 | 2_2:+20230039 | Msa0243300:CDS |
TTGGTTTCAAGTCTGGGTGC+AGG | 0.536173 | 2_2:-20229775 | None:intergenic |
GAGGAGGATGATAAGGATCA+TGG | 0.536967 | 2_2:+20225416 | Msa0243300:CDS |
GTCATAGATTTGGATTCGGA+CGG | 0.540389 | 2_2:+20225314 | Msa0243300:CDS |
GTATCAGTATTCTCGTTCCT+AGG | 0.541700 | 2_2:-20229314 | None:intergenic |
GGACGGGGAGCACACCGAAA+AGG | 0.543559 | 2_2:+20225331 | Msa0243300:CDS |
CACCACGAGAGGTCGTGCAT+CGG | 0.550292 | 2_2:-20229015 | None:intergenic |
TCACAGTACTTGTGTCAAGA+AGG | 0.552998 | 2_2:+20230294 | Msa0243300:CDS |
GGATCCTACTCCTAATGCGT+TGG | 0.553435 | 2_2:-20229481 | None:intergenic |
GTTATAAATCGCTTAGAGAG+TGG | 0.555195 | 2_2:+20225110 | Msa0243300:CDS |
TTCTATATCTGAGCATACAA+TGG | 0.558790 | 2_2:+20229820 | Msa0243300:CDS |
TGAACAAAGGGAGTGCTCCA+TGG | 0.559236 | 2_2:+20230051 | Msa0243300:CDS |
GATGATAGGGATCATGATGA+AGG | 0.559405 | 2_2:+20225743 | Msa0243300:CDS |
AGCTGCTGATTCTCCAGAAG+AGG | 0.560162 | 2_2:+20230267 | Msa0243300:CDS |
AGTTGAGAGAGTTGATGTGA+AGG | 0.561498 | 2_2:+20230375 | Msa0243300:CDS |
TATCATTGATTCAGATGAGG+AGG | 0.561761 | 2_2:+20225400 | Msa0243300:CDS |
TCTGGCCTGGTCGGAAAGCA+CGG | 0.562735 | 2_2:-20230216 | None:intergenic |
TTTACATCTTCCCCTAACAA+TGG | 0.567105 | 2_2:-20230424 | None:intergenic |
CATGATCCCAATGCTTACCA+TGG | 0.571021 | 2_2:+20227074 | Msa0243300:CDS |
ACAGTAAAATCAACTAGGCC+AGG | 0.571652 | 2_2:-20229656 | None:intergenic |
AGATCATCCACCCGAAGAAG+AGG | 0.572717 | 2_2:+20228149 | Msa0243300:CDS |
CCTCTCGTGGTGCTTCCTAA+GGG | 0.575239 | 2_2:+20229026 | Msa0243300:CDS |
AATAGTTGATTAGCAAGTCT+AGG | 0.577621 | 2_2:-20225215 | None:intergenic |
ACGGGCTAGAAGATGTTTGG+AGG | 0.582292 | 2_2:+20227306 | Msa0243300:CDS |
TCAATCAAAGCATGTGGTGA+GGG | 0.583869 | 2_2:+20230115 | Msa0243300:CDS |
CTGAATCTATGCCAATCAGC+TGG | 0.587383 | 2_2:+20229905 | Msa0243300:CDS |
GGAGTTTCTGACATGGCAAG+TGG | 0.588515 | 2_2:+20229070 | Msa0243300:CDS |
TTCGGGTCAATCAAAGCATG+TGG | 0.589622 | 2_2:+20230109 | Msa0243300:CDS |
CGGGCTAGAAGATGTTTGGA+GGG | 0.589781 | 2_2:+20227307 | Msa0243300:CDS |
TGTTATCATCGATTCAGTTG+AGG | 0.590425 | 2_2:+20225718 | Msa0243300:CDS |
GAAAATTGAATCCTTCGACT+TGG | 0.592086 | 2_2:-20228878 | None:intergenic |
AGAAGATGTTTGGAGGGAGA+TGG | 0.593018 | 2_2:+20227313 | Msa0243300:CDS |
AAGGTTAGCTATGAAATGGA+AGG | 0.595000 | 2_2:+20229979 | Msa0243300:CDS |
TCCCGATGCACGACCTCTCG+TGG | 0.597869 | 2_2:+20229013 | Msa0243300:CDS |
TTGTCCAACGCATTAGGAGT+AGG | 0.597875 | 2_2:+20229477 | Msa0243300:CDS |
TAGGAACGAGAATACTGATA+CGG | 0.598994 | 2_2:+20229316 | Msa0243300:CDS |
GAGAATCGTCCACTGAACAA+AGG | 0.601522 | 2_2:+20230038 | Msa0243300:CDS |
GTCAATCAAAGCATGTGGTG+AGG | 0.601636 | 2_2:+20230114 | Msa0243300:CDS |
ATGAAACCGCACCAAGTCGA+AGG | 0.602444 | 2_2:+20228867 | Msa0243300:CDS |
AGATAATGGACGAAAACTGT+TGG | 0.602446 | 2_2:-20229202 | None:intergenic |
AGGAGTAGGATCCATTTACC+TGG | 0.603942 | 2_2:+20229491 | Msa0243300:CDS |
ATGTAATACCGGATGAAGCA+GGG | 0.604945 | 2_2:-20223864 | None:intergenic |
TGAAGTTAAGACAATAAAGA+GGG | 0.605026 | 2_2:+20229709 | Msa0243300:CDS |
ATTTATCATTGATTCAGATG+AGG | 0.606144 | 2_2:+20225397 | Msa0243300:CDS |
TTGAATCCTTCGACTTGGTG+CGG | 0.606513 | 2_2:-20228873 | None:intergenic |
GGAAGTCTTAAAACAGTGGG+TGG | 0.608781 | 2_2:+20229151 | Msa0243300:CDS |
AAGGTTGATACTGAAGATGA+CGG | 0.609380 | 2_2:+20227287 | Msa0243300:CDS |
TTTATATCAAAATCATGTCA+AGG | 0.609653 | 2_2:+20229391 | Msa0243300:CDS |
CGCTTGCCATGTTTAACACA+TGG | 0.610807 | 2_2:+20225047 | Msa0243300:CDS |
AGGTTGATACTGAAGATGAC+GGG | 0.612267 | 2_2:+20227288 | Msa0243300:CDS |
TAATTATGTTGGAGTACATG+AGG | 0.612315 | 2_2:+20227166 | Msa0243300:CDS |
ATTGGAAGTCTTAAAACAGT+GGG | 0.613903 | 2_2:+20229148 | Msa0243300:CDS |
AAGTTCAAGATGTCTTCTGT+AGG | 0.616210 | 2_2:+20229740 | Msa0243300:CDS |
GTTTGTGGGGTTATTGACAG+AGG | 0.616734 | 2_2:+20228234 | Msa0243300:CDS |
GCGAACCAAGATGTGAGAGA+CGG | 0.616830 | 2_2:+20229854 | Msa0243300:CDS |
TGATGAAGGAACTCCCAACA+TGG | 0.619010 | 2_2:+20225757 | Msa0243300:CDS |
TGTTATCATTGATTCAAATG+GGG | 0.619334 | 2_2:+20225814 | Msa0243300:CDS |
ATGTGGTGAGGGTATATCAC+TGG | 0.620246 | 2_2:+20230126 | Msa0243300:CDS |
AGAGTTGATGTGAAGGAATG+TGG | 0.620738 | 2_2:+20230382 | Msa0243300:CDS |
TGATGAAGAAACTCCCAACA+TGG | 0.622428 | 2_2:+20225256 | Msa0243300:CDS |
TGATGAAGAAACTCCCAACA+TGG | 0.622428 | 2_2:+20225661 | Msa0243300:CDS |
TTTGAATGGAATGAATATTG+TGG | 0.623573 | 2_2:+20230337 | Msa0243300:CDS |
CCATCTTTATAAACTTTGGG+CGG | 0.625396 | 2_2:-20229439 | None:intergenic |
GCACCACAGTAAAATCAACT+AGG | 0.627117 | 2_2:-20229661 | None:intergenic |
TGTTACCATTGATTCAAGTG+AGG | 0.629258 | 2_2:+20225520 | Msa0243300:CDS |
TAGCTTGACGAGTAACAGAC+GGG | 0.631651 | 2_2:-20230189 | None:intergenic |
TCACAGAAGTCTTTCACACC+AGG | 0.631873 | 2_2:-20229509 | None:intergenic |
TGCTAATCAACTATTGAGAG+TGG | 0.634052 | 2_2:+20225223 | Msa0243300:CDS |
TCTTTATGTTGGTGTACGTG+AGG | 0.635289 | 2_2:+20227253 | Msa0243300:CDS |
GATAACACAAAGAAAGACAA+AGG | 0.636337 | 2_2:+20227143 | Msa0243300:CDS |
GATAACACAAAGAAAGACAA+AGG | 0.636337 | 2_2:+20227230 | Msa0243300:CDS |
TTTCTTGTCAGAAACCTGGT+GGG | 0.638542 | 2_2:+20228897 | Msa0243300:CDS |
ACATCACCATGTGTTAAACA+TGG | 0.639224 | 2_2:-20225053 | None:intergenic |
CCCTTAGGAAGCACCACGAG+AGG | 0.643968 | 2_2:-20229026 | None:intergenic |
AATTGGAAGTCTTAAAACAG+TGG | 0.644070 | 2_2:+20229147 | Msa0243300:CDS |
ATAGCTTGACGAGTAACAGA+CGG | 0.650423 | 2_2:-20230190 | None:intergenic |
AGGTTAGCTATGAAATGGAA+GGG | 0.651392 | 2_2:+20229980 | Msa0243300:CDS |
GATCCCAATGCTTACCATGG+AGG | 0.651668 | 2_2:+20227077 | Msa0243300:CDS |
TGAAGCAGGGCGTTTACTGG+AGG | 0.656942 | 2_2:-20223851 | None:intergenic |
TGTTTGGAGGGAGATGGCAA+TGG | 0.662485 | 2_2:+20227319 | Msa0243300:CDS |
TTATGTTTGTCGCGTTTGTG+GGG | 0.662905 | 2_2:+20228221 | Msa0243300:CDS |
CCTGGTGGGAGACCATCCTG+GGG | 0.668528 | 2_2:+20228911 | Msa0243300:CDS |
ACGTGAGGAAGAAGATAACA+AGG | 0.674639 | 2_2:+20227268 | Msa0243300:CDS |
ACTTCATGAAATGGTGCTGG+AGG | 0.676126 | 2_2:-20225599 | None:intergenic |
TGGTGCTCAACATGACACCC+AGG | 0.688712 | 2_2:+20229678 | Msa0243300:CDS |
AAAATTCAACAATTCACCCG+AGG | 0.695204 | 2_2:+20230075 | Msa0243300:CDS |
TCTAGAAAGTCCATTGTTAG+GGG | 0.705989 | 2_2:+20230414 | Msa0243300:CDS |
CTGGTGGGAGACCATCCTGG+GGG | 0.719970 | 2_2:+20228912 | Msa0243300:CDS |
TTTGCGGGAGATGACCAGCA+AGG | 0.730371 | 2_2:+20229595 | Msa0243300:CDS |
GAACCAAGATGTGAGAGACG+GGG | 0.738263 | 2_2:+20229856 | Msa0243300:CDS |
ATATCAAAATCATGTCAAGG+AGG | 0.742826 | 2_2:+20229394 | Msa0243300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAAATAAAAAAAA+TGG | + | chr2_2:20226639-20226658 | Msa0243300:intron | 0.0% |
!! | AAAAAAAAAAAAATCCTTAA+TGG | + | chr2_2:20224931-20224950 | Msa0243300:intron | 10.0% |
!! | AAAAAAAAATAACAGAATTA+AGG | - | chr2_2:20226084-20226103 | None:intergenic | 10.0% |
!! | ACATATAAAAGTAAAAAATA+AGG | - | chr2_2:20226122-20226141 | None:intergenic | 10.0% |
!! | TAAAATAATTTCTATACATA+TGG | + | chr2_2:20227918-20227937 | Msa0243300:intron | 10.0% |
!!! | TTAGCAATTTTTAGAATAAA+AGG | + | chr2_2:20224487-20224506 | Msa0243300:intron | 15.0% |
!!! | TTGTTTTTGTACTTTTATTA+TGG | + | chr2_2:20224715-20224734 | Msa0243300:intron | 15.0% |
!! | CATATATTTATTAATACAAG+AGG | - | chr2_2:20224858-20224877 | None:intergenic | 15.0% |
!! | TATAAAAGTAAAAAATAAGG+CGG | - | chr2_2:20226119-20226138 | None:intergenic | 15.0% |
!!! | TTACTTTTATATGTATAAAG+TGG | + | chr2_2:20226128-20226147 | Msa0243300:intron | 15.0% |
!! | TATAATGATAAGTTATACAT+TGG | - | chr2_2:20226289-20226308 | None:intergenic | 15.0% |
!! | AATGTATAACTTATCATTAT+AGG | + | chr2_2:20226288-20226307 | Msa0243300:intron | 15.0% |
!! | TATGTAATTATTGAAAATGT+TGG | - | chr2_2:20226439-20226458 | None:intergenic | 15.0% |
!! | AATTATAGATTGGAAAATAT+TGG | + | chr2_2:20226616-20226635 | Msa0243300:intron | 15.0% |
!! | AATAAAAAAAATGGATATTG+TGG | + | chr2_2:20226648-20226667 | Msa0243300:intron | 15.0% |
!! | AATATGTTTGGAAAAATAAA+TGG | - | chr2_2:20226785-20226804 | None:intergenic | 15.0% |
!! | TCATTAACAGATATATATTA+AGG | - | chr2_2:20227480-20227499 | None:intergenic | 15.0% |
!!! | AAAGAAATTTTTGTAATATC+AGG | + | chr2_2:20230016-20230035 | Msa0243300:CDS | 15.0% |
!! | AATACAAATAAACAAGAATT+AGG | - | chr2_2:20230529-20230548 | None:intergenic | 15.0% |
!! | AAAAAATATATACTGATCCA+TGG | - | chr2_2:20224094-20224113 | None:intergenic | 20.0% |
!!! | ATAACATTTGAAATTGCATA+CGG | - | chr2_2:20225095-20225114 | None:intergenic | 20.0% |
!!! | ATCAATGATAACATTTTGAT+AGG | - | chr2_2:20225807-20225826 | None:intergenic | 20.0% |
!!! | AATGTTATCATTGATTCAAA+TGG | + | chr2_2:20225812-20225831 | Msa0243300:CDS | 20.0% |
!!! | ATGTTATCATTGATTCAAAT+GGG | + | chr2_2:20225813-20225832 | Msa0243300:CDS | 20.0% |
!! | AATTTAGTCTGACATATATT+TGG | + | chr2_2:20226182-20226201 | Msa0243300:intron | 20.0% |
!! | TATCAAATGATTACCAAATT+GGG | - | chr2_2:20226528-20226547 | None:intergenic | 20.0% |
!! | ATATCAAATGATTACCAAAT+TGG | - | chr2_2:20226529-20226548 | None:intergenic | 20.0% |
!! | TCATCACAATATAAAATTTC+TGG | + | chr2_2:20226568-20226587 | Msa0243300:intron | 20.0% |
!! | TAGTTATGCAAATTATAGAT+TGG | + | chr2_2:20226606-20226625 | Msa0243300:intron | 20.0% |
!! | AAAAGTTCATACAATATGTT+TGG | - | chr2_2:20226797-20226816 | None:intergenic | 20.0% |
!!! | AAAGTATGTATACATTCTTT+TGG | + | chr2_2:20227356-20227375 | Msa0243300:intron | 20.0% |
!! | GAAATAATATGAAGAAAAAC+AGG | - | chr2_2:20227444-20227463 | None:intergenic | 20.0% |
!!! | TTTTGTTTGGTCTTAAATAT+TGG | + | chr2_2:20228315-20228334 | Msa0243300:intron | 20.0% |
!! | TGTCTTAAAATTAGATTCAT+AGG | + | chr2_2:20228379-20228398 | Msa0243300:intron | 20.0% |
!! | AACCTTCAATAAAATTGATA+CGG | - | chr2_2:20228715-20228734 | None:intergenic | 20.0% |
!!! | AAATATATCAGCTTTTTCTT+GGG | - | chr2_2:20228778-20228797 | None:intergenic | 20.0% |
!! | TTTATATCAAAATCATGTCA+AGG | + | chr2_2:20229391-20229410 | Msa0243300:CDS | 20.0% |
!! | TTTCCATCTTTATAAACTTT+GGG | - | chr2_2:20229445-20229464 | None:intergenic | 20.0% |
!! | TACAAAAAATTATGTAAGAG+TGG | - | chr2_2:20230471-20230490 | None:intergenic | 20.0% |
! | GAAAAAAGAAAGAGAAAGAA+TGG | - | chr2_2:20223894-20223913 | None:intergenic | 25.0% |
!! | ATTTGTTACAGATTATTTCG+AGG | - | chr2_2:20224036-20224055 | None:intergenic | 25.0% |
! | TCGAAATAATCTGTAACAAA+TGG | + | chr2_2:20224035-20224054 | Msa0243300:intron | 25.0% |
! | CGAAATAATCTGTAACAAAT+GGG | + | chr2_2:20224036-20224055 | Msa0243300:intron | 25.0% |
!! | AACTGTATTTGTAACTTGTA+AGG | + | chr2_2:20224177-20224196 | Msa0243300:intron | 25.0% |
!!! | GTTCTAAAAACAGAAAATGA+TGG | + | chr2_2:20224633-20224652 | Msa0243300:intron | 25.0% |
!! | TACTTTTATTATGGTTCCTT+AGG | + | chr2_2:20224724-20224743 | Msa0243300:intron | 25.0% |
! | CAAGATACTAATATCCATTA+AGG | - | chr2_2:20224948-20224967 | None:intergenic | 25.0% |
!!! | ACATTCTTATTTTCCATGTT+GGG | - | chr2_2:20225272-20225291 | None:intergenic | 25.0% |
!!! | AACATTCTTATTTTCCATGT+TGG | - | chr2_2:20225273-20225292 | None:intergenic | 25.0% |
! | ATGGAAAATAAGAATGTTAC+TGG | + | chr2_2:20225275-20225294 | Msa0243300:CDS | 25.0% |
! | ACATCATAATGTCATAGATT+TGG | + | chr2_2:20225304-20225323 | Msa0243300:CDS | 25.0% |
! | TAATGTCATAGATTTGGATT+CGG | + | chr2_2:20225310-20225329 | Msa0243300:CDS | 25.0% |
!! | GTAACATTATATCCTTTTTC+TGG | - | chr2_2:20225368-20225387 | None:intergenic | 25.0% |
! | TCATCTGAATCAATGATAAA+TGG | - | chr2_2:20225398-20225417 | None:intergenic | 25.0% |
!!! | ATTTATCATTGATTCAGATG+AGG | + | chr2_2:20225397-20225416 | Msa0243300:CDS | 25.0% |
!!! | ATCAATGGTAACATTTTGAT+GGG | - | chr2_2:20225513-20225532 | None:intergenic | 25.0% |
!! | AATCAATGGTAACATTTTGA+TGG | - | chr2_2:20225514-20225533 | None:intergenic | 25.0% |
!!! | ACTTTTTCATTTTCCATGTT+GGG | - | chr2_2:20225677-20225696 | None:intergenic | 25.0% |
!!! | AACTTTTTCATTTTCCATGT+TGG | - | chr2_2:20225678-20225697 | None:intergenic | 25.0% |
!!! | ATAACATTTTGATAGGACAT+AGG | - | chr2_2:20225704-20225723 | None:intergenic | 25.0% |
!!! | ATCGATGATAACATTTTGAT+AGG | - | chr2_2:20225711-20225730 | None:intergenic | 25.0% |
!!! | ACTTTTTCATTTTCCATGTT+GGG | - | chr2_2:20225677-20225696 | None:intergenic | 25.0% |
!!! | AACTTTTTCATTTTCCATGT+TGG | - | chr2_2:20225678-20225697 | None:intergenic | 25.0% |
! | ATGGAAAATGAAAAAGTTAC+CGG | + | chr2_2:20225680-20225699 | Msa0243300:CDS | 25.0% |
!!! | TGTTATCATTGATTCAAATG+GGG | + | chr2_2:20225814-20225833 | Msa0243300:CDS | 25.0% |
! | TTTAAACACACCTTTCATTT+GGG | + | chr2_2:20225950-20225969 | Msa0243300:intron | 25.0% |
!! | GTATTTCATTTTACCATTTG+TGG | + | chr2_2:20226008-20226027 | Msa0243300:intron | 25.0% |
! | GTCAGACTAAATTATATCTA+TGG | - | chr2_2:20226175-20226194 | None:intergenic | 25.0% |
! | AACTTATCATTATAGGTCTT+TGG | + | chr2_2:20226295-20226314 | Msa0243300:intron | 25.0% |
! | CTAATAGAAATCCAACATTT+AGG | - | chr2_2:20226364-20226383 | None:intergenic | 25.0% |
!!! | ATTGTATGAACTTTTTCCAT+AGG | + | chr2_2:20226802-20226821 | Msa0243300:intron | 25.0% |
!!! | TTGTATGAACTTTTTCCATA+GGG | + | chr2_2:20226803-20226822 | Msa0243300:intron | 25.0% |
! | TGAAAAGAAAGAGAGAAAAA+AGG | - | chr2_2:20226918-20226937 | None:intergenic | 25.0% |
! | TCTTTCTTTGTGTTATCTTT+AGG | - | chr2_2:20227140-20227159 | None:intergenic | 25.0% |
! | AAAGACAAAGGTAATTATGT+TGG | + | chr2_2:20227155-20227174 | Msa0243300:CDS | 25.0% |
! | AACAACTATATTTGTCAAGT+AGG | + | chr2_2:20227396-20227415 | Msa0243300:intron | 25.0% |
!! | CATTTTCCTTATGAAAAGAA+GGG | + | chr2_2:20227513-20227532 | Msa0243300:intron | 25.0% |
!! | ATTTTCCTTATGAAAAGAAG+GGG | + | chr2_2:20227514-20227533 | Msa0243300:intron | 25.0% |
! | CTAAATAAAGCCGAAAAAAA+TGG | - | chr2_2:20227695-20227714 | None:intergenic | 25.0% |
!!! | TTTTCGGCTTTATTTAGTAT+AGG | + | chr2_2:20227698-20227717 | Msa0243300:intron | 25.0% |
!!! | TTTCGGCTTTATTTAGTATA+GGG | + | chr2_2:20227699-20227718 | Msa0243300:intron | 25.0% |
! | CAATATGCATTACATTAACT+AGG | - | chr2_2:20227753-20227772 | None:intergenic | 25.0% |
! | ATCATAATTCAGAAGATTTC+AGG | - | chr2_2:20227791-20227810 | None:intergenic | 25.0% |
! | TTTAAACTAATCAATCCCAA+AGG | - | chr2_2:20228104-20228123 | None:intergenic | 25.0% |
!!! | TTCATTTTAAAAGACGATCT+TGG | + | chr2_2:20228198-20228217 | Msa0243300:CDS | 25.0% |
! | ACAGAATCTCTTATAGTTTA+TGG | + | chr2_2:20228468-20228487 | Msa0243300:intron | 25.0% |
! | ACCAAACCAAAATGATAAAA+TGG | + | chr2_2:20228584-20228603 | Msa0243300:intron | 25.0% |
!!! | AATGTGCCATTTTATCATTT+TGG | - | chr2_2:20228593-20228612 | None:intergenic | 25.0% |
! | AAATGATAAAATGGCACATT+AGG | + | chr2_2:20228593-20228612 | Msa0243300:intron | 25.0% |
!! | ATTAGGATATTTTATGGCAT+GGG | + | chr2_2:20228610-20228629 | Msa0243300:intron | 25.0% |
!! | TACCGTATCAATTTTATTGA+AGG | + | chr2_2:20228710-20228729 | Msa0243300:intron | 25.0% |
!!! | CAAATATATCAGCTTTTTCT+TGG | - | chr2_2:20228779-20228798 | None:intergenic | 25.0% |
! | CAAGAAAAAGCTGATATATT+TGG | + | chr2_2:20228777-20228796 | Msa0243300:CDS | 25.0% |
! | ACACTGTAAAAATCATAAAG+TGG | - | chr2_2:20229104-20229123 | None:intergenic | 25.0% |
!! | TTATGATTTTTACAGTGTGA+AGG | + | chr2_2:20229106-20229125 | Msa0243300:CDS | 25.0% |
! | ATTACAGTTATCACAGATAA+TGG | - | chr2_2:20229219-20229238 | None:intergenic | 25.0% |
! | GTTTCTTAAGCAATATATCT+TGG | - | chr2_2:20229262-20229281 | None:intergenic | 25.0% |
!! | TCATCTAAAATGAGAATTGA+CGG | - | chr2_2:20229284-20229303 | None:intergenic | 25.0% |
!! | TCAATTCTCATTTTAGATGA+GGG | + | chr2_2:20229284-20229303 | Msa0243300:CDS | 25.0% |
!!! | ATGATTTTGATATAAAGTCC+CGG | - | chr2_2:20229387-20229406 | None:intergenic | 25.0% |
! | GTTTCCATCTTTATAAACTT+TGG | - | chr2_2:20229446-20229465 | None:intergenic | 25.0% |
! | ATGAAGTTAAGACAATAAAG+AGG | + | chr2_2:20229708-20229727 | Msa0243300:CDS | 25.0% |
! | TGAAGTTAAGACAATAAAGA+GGG | + | chr2_2:20229709-20229728 | Msa0243300:CDS | 25.0% |
!!! | AACCTTTCCAAATATTTTAG+AGG | - | chr2_2:20229965-20229984 | None:intergenic | 25.0% |
!! | TGAATTGTTGAATTTTTCCA+TGG | - | chr2_2:20230071-20230090 | None:intergenic | 25.0% |
! | AGGAATTAATTTCGAAAATG+TGG | + | chr2_2:20230314-20230333 | Msa0243300:CDS | 25.0% |
! | TTTGAATGGAATGAATATTG+TGG | + | chr2_2:20230337-20230356 | Msa0243300:CDS | 25.0% |
! | CTTGTTTATTTGTATTTGTC+AGG | + | chr2_2:20230533-20230552 | Msa0243300:intron | 25.0% |
AGAATGGAAGAATGTAATAC+CGG | - | chr2_2:20223878-20223897 | None:intergenic | 30.0% | |
!!! | TAGCGAGAATCACATTTTTT+AGG | + | chr2_2:20223943-20223962 | Msa0243300:intron | 30.0% |
!!! | GCTTTTTTTAGAAATGTGTC+TGG | + | chr2_2:20224199-20224218 | Msa0243300:intron | 30.0% |
TTAGTCTCGAAATGAAATGA+GGG | + | chr2_2:20224357-20224376 | Msa0243300:intron | 30.0% | |
CATGAAGTAATCCATTTGTT+TGG | + | chr2_2:20224390-20224409 | Msa0243300:intron | 30.0% | |
AAGTAATCCATTTGTTTGGA+TGG | + | chr2_2:20224394-20224413 | Msa0243300:intron | 30.0% | |
CAGGTTTATAACAATGATGA+AGG | - | chr2_2:20224553-20224572 | None:intergenic | 30.0% | |
TGATATGAAATGATGGCTTT+AGG | + | chr2_2:20224611-20224630 | Msa0243300:intron | 30.0% | |
!! | TTTCAGATTGCTTAGTTTTC+TGG | + | chr2_2:20224892-20224911 | Msa0243300:intron | 30.0% |
!!! | ACATTTCATTTTCTGAAACC+AGG | + | chr2_2:20224978-20224997 | Msa0243300:intron | 30.0% |
! | TTTGCATTTTCTGGGTTATA+AGG | - | chr2_2:20225169-20225188 | None:intergenic | 30.0% |
ACCCAGAAAATGCAAATATT+AGG | + | chr2_2:20225173-20225192 | Msa0243300:CDS | 30.0% | |
! | GCCTAATATTTGCATTTTCT+GGG | - | chr2_2:20225177-20225196 | None:intergenic | 30.0% |
! | TAGGACATTTTGCAAAGTAA+GGG | - | chr2_2:20225199-20225218 | None:intergenic | 30.0% |
AATAGTTGATTAGCAAGTCT+AGG | - | chr2_2:20225218-20225237 | None:intergenic | 30.0% | |
!!! | GCTTTTTCACTTTCAATGTA+GGG | - | chr2_2:20225479-20225498 | None:intergenic | 30.0% |
!!! | AGCTTTTTCACTTTCAATGT+AGG | - | chr2_2:20225480-20225499 | None:intergenic | 30.0% |
! | ATGATGATGACTTCATGAAA+TGG | - | chr2_2:20225611-20225630 | None:intergenic | 30.0% |
! | TGAAGTCATCATCATTGATT+TGG | + | chr2_2:20225616-20225635 | Msa0243300:CDS | 30.0% |
TGGAAAATGAAAAAGTTACC+GGG | + | chr2_2:20225777-20225796 | Msa0243300:CDS | 30.0% | |
CTTACAATCATTTCTAATGC+AGG | - | chr2_2:20225908-20225927 | None:intergenic | 30.0% | |
TTTAAAGGATTGCAAAAGCA+GGG | - | chr2_2:20225936-20225955 | None:intergenic | 30.0% | |
! | CAAATGAAAGGTGTGTTTAA+AGG | - | chr2_2:20225951-20225970 | None:intergenic | 30.0% |
CTTTAAACACACCTTTCATT+TGG | + | chr2_2:20225949-20225968 | Msa0243300:intron | 30.0% | |
! | TTTCATTTTACCATTTGTGG+CGG | + | chr2_2:20226011-20226030 | Msa0243300:intron | 30.0% |
ATGTATAAAGTGGAATCTTC+TGG | + | chr2_2:20226138-20226157 | Msa0243300:intron | 30.0% | |
TAGTCTGACATATATTTGGA+AGG | + | chr2_2:20226186-20226205 | Msa0243300:intron | 30.0% | |
TTATTGCATAGCCTAAATGT+TGG | + | chr2_2:20226350-20226369 | Msa0243300:intron | 30.0% | |
TAAAAACGCACATGATTCAA+TGG | - | chr2_2:20226405-20226424 | None:intergenic | 30.0% | |
TCATAGGAGTAAAGGAAAAA+AGG | - | chr2_2:20226711-20226730 | None:intergenic | 30.0% | |
!!! | TTTTTTCCTTTACTCCTATG+AGG | + | chr2_2:20226710-20226729 | Msa0243300:intron | 30.0% |
CTGAACGATGAACAATATAT+GGG | + | chr2_2:20226754-20226773 | Msa0243300:intron | 30.0% | |
TGAACGATGAACAATATATG+GGG | + | chr2_2:20226755-20226774 | Msa0243300:intron | 30.0% | |
TAATACACAGAATCTTACCA+AGG | - | chr2_2:20226855-20226874 | None:intergenic | 30.0% | |
TTGGTAAGATTCTGTGTATT+AGG | + | chr2_2:20226854-20226873 | Msa0243300:intron | 30.0% | |
! | AACATTCTTTTTCCCACTTT+GGG | - | chr2_2:20226989-20227008 | None:intergenic | 30.0% |
! | TAACATTCTTTTTCCCACTT+TGG | - | chr2_2:20226990-20227009 | None:intergenic | 30.0% |
TCCATGCAAAAATGCTTTAT+AGG | + | chr2_2:20227046-20227065 | Msa0243300:intron | 30.0% | |
CCATGCAAAAATGCTTTATA+GGG | + | chr2_2:20227047-20227066 | Msa0243300:intron | 30.0% | |
GATAACACAAAGAAAGACAA+AGG | + | chr2_2:20227143-20227162 | Msa0243300:CDS | 30.0% | |
TAATTATGTTGGAGTACATG+AGG | + | chr2_2:20227166-20227185 | Msa0243300:CDS | 30.0% | |
ACATGAGGAAGAAGATAATA+AGG | + | chr2_2:20227181-20227200 | Msa0243300:CDS | 30.0% | |
TCTTTCTTTGTGTTATCTTC+AGG | - | chr2_2:20227227-20227246 | None:intergenic | 30.0% | |
GATAACACAAAGAAAGACAA+AGG | + | chr2_2:20227143-20227162 | Msa0243300:CDS | 30.0% | |
AAAGACAAAGGTCTTTATGT+TGG | + | chr2_2:20227242-20227261 | Msa0243300:CDS | 30.0% | |
! | GCATTTTCCTTATGAAAAGA+AGG | + | chr2_2:20227512-20227531 | Msa0243300:intron | 30.0% |
! | TTTTCCTTATGAAAAGAAGG+GGG | + | chr2_2:20227515-20227534 | Msa0243300:intron | 30.0% |
!! | ATTTTGATGTTCACTGAGAA+TGG | + | chr2_2:20227664-20227683 | Msa0243300:intron | 30.0% |
TGCATTACATTAACTAGGTA+AGG | - | chr2_2:20227748-20227767 | None:intergenic | 30.0% | |
ATTCAACCTTTCTTTCTCTT+TGG | + | chr2_2:20227831-20227850 | Msa0243300:intron | 30.0% | |
!! | ACAGAAGAATTTCAAGTTAC+AGG | - | chr2_2:20227861-20227880 | None:intergenic | 30.0% |
ATTATCTCTTAGAGTTCCTT+TGG | + | chr2_2:20228085-20228104 | Msa0243300:intron | 30.0% | |
TTATCTCTTAGAGTTCCTTT+GGG | + | chr2_2:20228086-20228105 | Msa0243300:intron | 30.0% | |
AGTTTAAATGTACTCCTACT+AGG | + | chr2_2:20228116-20228135 | Msa0243300:intron | 30.0% | |
CTTGTATTGGAACTCAAATA+TGG | - | chr2_2:20228268-20228287 | None:intergenic | 30.0% | |
! | CATATTTGAGTTCCAATACA+AGG | + | chr2_2:20228266-20228285 | Msa0243300:CDS | 30.0% |
! | TCTGCATTAATGCTTTTGTT+TGG | + | chr2_2:20228302-20228321 | Msa0243300:intron | 30.0% |
! | ATAGGTTGAATGTTTCAACA+TGG | + | chr2_2:20228397-20228416 | Msa0243300:intron | 30.0% |
! | TAGGTTGAATGTTTCAACAT+GGG | + | chr2_2:20228398-20228417 | Msa0243300:intron | 30.0% |
CTCTTATAGTTTATGGTTTC+AGG | + | chr2_2:20228475-20228494 | Msa0243300:intron | 30.0% | |
!!! | ATCATTTTGGTTTGGTAAAG+AGG | - | chr2_2:20228580-20228599 | None:intergenic | 30.0% |
!!! | GCCATTTTATCATTTTGGTT+TGG | - | chr2_2:20228588-20228607 | None:intergenic | 30.0% |
! | TGGCACATTAGGATATTTTA+TGG | + | chr2_2:20228604-20228623 | Msa0243300:intron | 30.0% |
! | CATTAGGATATTTTATGGCA+TGG | + | chr2_2:20228609-20228628 | Msa0243300:intron | 30.0% |
GAACTTATATGTCTGAATCA+TGG | + | chr2_2:20228748-20228767 | Msa0243300:CDS | 30.0% | |
!! | AATACTATCGACTTGGAAAA+AGG | + | chr2_2:20229049-20229068 | Msa0243300:CDS | 30.0% |
AATTGGAAGTCTTAAAACAG+TGG | + | chr2_2:20229147-20229166 | Msa0243300:CDS | 30.0% | |
ATTGGAAGTCTTAAAACAGT+GGG | + | chr2_2:20229148-20229167 | Msa0243300:CDS | 30.0% | |
!!! | AACAAGAGTATCCTTTTCTT+AGG | + | chr2_2:20229176-20229195 | Msa0243300:CDS | 30.0% |
! | GTCAATTCTCATTTTAGATG+AGG | + | chr2_2:20229283-20229302 | Msa0243300:CDS | 30.0% |
ATATCAAAATCATGTCAAGG+AGG | + | chr2_2:20229394-20229413 | Msa0243300:CDS | 30.0% | |
!!! | GCTACTTTCCTTTTAAAATC+CGG | - | chr2_2:20229563-20229582 | None:intergenic | 30.0% |
TAGCTGTTATACATGATTTG+CGG | + | chr2_2:20229579-20229598 | Msa0243300:CDS | 30.0% | |
TTCTATATCTGAGCATACAA+TGG | + | chr2_2:20229820-20229839 | Msa0243300:CDS | 30.0% | |
!! | TCTCTTGCCTCTAAAATATT+TGG | + | chr2_2:20229955-20229974 | Msa0243300:CDS | 30.0% |
!! | TGCCTCTAAAATATTTGGAA+AGG | + | chr2_2:20229960-20229979 | Msa0243300:CDS | 30.0% |
TTTCGAAAATGTGGTTTGAA+TGG | + | chr2_2:20230323-20230342 | Msa0243300:CDS | 30.0% | |
! | TTTCTAGAAAGTCCATTGTT+AGG | + | chr2_2:20230412-20230431 | Msa0243300:CDS | 30.0% |
! | TTCTAGAAAGTCCATTGTTA+GGG | + | chr2_2:20230413-20230432 | Msa0243300:CDS | 30.0% |
ATGTAAAAGCCCTGTATAAA+AGG | + | chr2_2:20230440-20230459 | Msa0243300:CDS | 30.0% | |
AGAAGAAGAGTGAGAGAATA+GGG | - | chr2_2:20223799-20223818 | None:intergenic | 35.0% | |
AAGAAGAAGAGTGAGAGAAT+AGG | - | chr2_2:20223800-20223819 | None:intergenic | 35.0% | |
!! | GATGAAATTTGGAAGCGTTT+AGG | - | chr2_2:20223823-20223842 | None:intergenic | 35.0% |
ACGCTTCCAAATTTCATCAA+TGG | + | chr2_2:20223825-20223844 | Msa0243300:exon | 35.0% | |
AGTTAAATCACCATTGTCCA+TGG | + | chr2_2:20224074-20224093 | Msa0243300:intron | 35.0% | |
ATATACTGATCCATGGACAA+TGG | - | chr2_2:20224087-20224106 | None:intergenic | 35.0% | |
ACAATTTCCTCACGAAAACA+TGG | - | chr2_2:20224130-20224149 | None:intergenic | 35.0% | |
GGTTCGACAGTAACAAAAAA+AGG | - | chr2_2:20224227-20224246 | None:intergenic | 35.0% | |
! | GTTAGTCTCGAAATGAAATG+AGG | + | chr2_2:20224356-20224375 | Msa0243300:intron | 35.0% |
TAGTCTCGAAATGAAATGAG+GGG | + | chr2_2:20224358-20224377 | Msa0243300:intron | 35.0% | |
TAATCCATTTGTTTGGATGG+AGG | + | chr2_2:20224397-20224416 | Msa0243300:intron | 35.0% | |
AATCCATTTGTTTGGATGGA+GGG | + | chr2_2:20224398-20224417 | Msa0243300:intron | 35.0% | |
GAAAAGGGGTGATGAATTAT+AGG | + | chr2_2:20224430-20224449 | Msa0243300:intron | 35.0% | |
AACCCTGTGATATGAAATGA+TGG | + | chr2_2:20224604-20224623 | Msa0243300:intron | 35.0% | |
AGCCATCATTTCATATCACA+GGG | - | chr2_2:20224609-20224628 | None:intergenic | 35.0% | |
AAGCCATCATTTCATATCAC+AGG | - | chr2_2:20224610-20224629 | None:intergenic | 35.0% | |
!!! | AGTTTTTTGTGTCCTTCTTC+AGG | - | chr2_2:20225011-20225030 | None:intergenic | 35.0% |
ACATCACCATGTGTTAAACA+TGG | - | chr2_2:20225056-20225075 | None:intergenic | 35.0% | |
GTTATAAATCGCTTAGAGAG+TGG | + | chr2_2:20225110-20225129 | Msa0243300:CDS | 35.0% | |
! | GGCCTAATATTTGCATTTTC+TGG | - | chr2_2:20225178-20225197 | None:intergenic | 35.0% |
! | CTAGGACATTTTGCAAAGTA+AGG | - | chr2_2:20225200-20225219 | None:intergenic | 35.0% |
TGCTAATCAACTATTGAGAG+TGG | + | chr2_2:20225223-20225242 | Msa0243300:CDS | 35.0% | |
!! | TATCATTGATTCAGATGAGG+AGG | + | chr2_2:20225400-20225419 | Msa0243300:CDS | 35.0% |
GTTTCTTCATCATGATCTGT+TGG | - | chr2_2:20225248-20225267 | None:intergenic | 35.0% | |
ATTGAAAGTGAAAAAGCTCC+TGG | + | chr2_2:20225482-20225501 | Msa0243300:CDS | 35.0% | |
!! | TGTTACCATTGATTCAAGTG+AGG | + | chr2_2:20225520-20225539 | Msa0243300:CDS | 35.0% |
ATCTTCCTCACTTGAATCAA+TGG | - | chr2_2:20225528-20225547 | None:intergenic | 35.0% | |
ATTCAAGTGAGGAAGATGAT+AGG | + | chr2_2:20225531-20225550 | Msa0243300:CDS | 35.0% | |
TTCAAGTGAGGAAGATGATA+GGG | + | chr2_2:20225532-20225551 | Msa0243300:CDS | 35.0% | |
AGATGATAGGGATCAAAAAG+AGG | + | chr2_2:20225544-20225563 | Msa0243300:CDS | 35.0% | |
! | GGATCAAAAAGAGGATGTTT+TGG | + | chr2_2:20225553-20225572 | Msa0243300:CDS | 35.0% |
! | GGAACATCTTTTTCTCTTCT+TGG | - | chr2_2:20225581-20225600 | None:intergenic | 35.0% |
!! | CATCATCATTGATTTGGATG+AGG | + | chr2_2:20225622-20225641 | Msa0243300:CDS | 35.0% |
TTTGGATGAGGAAGATGATA+AGG | + | chr2_2:20225634-20225653 | Msa0243300:CDS | 35.0% | |
!! | TGTTATCATCGATTCAGTTG+AGG | + | chr2_2:20225718-20225737 | Msa0243300:CDS | 35.0% |
ATTCAGTTGAGGAAGATGAT+AGG | + | chr2_2:20225729-20225748 | Msa0243300:CDS | 35.0% | |
TTCAGTTGAGGAAGATGATA+GGG | + | chr2_2:20225730-20225749 | Msa0243300:CDS | 35.0% | |
!! | AACATTTTGATAGGACATCC+CGG | - | chr2_2:20225798-20225817 | None:intergenic | 35.0% |
GTTTAAAGGATTGCAAAAGC+AGG | - | chr2_2:20225937-20225956 | None:intergenic | 35.0% | |
AAGGATACAACCCAAATGAA+AGG | - | chr2_2:20225963-20225982 | None:intergenic | 35.0% | |
!! | ATTTGGGTTGTATCCTTCTT+GGG | + | chr2_2:20225966-20225985 | Msa0243300:intron | 35.0% |
AGTGAAACTTGACAGTAGAA+TGG | - | chr2_2:20226474-20226493 | None:intergenic | 35.0% | |
GCTGAACGATGAACAATATA+TGG | + | chr2_2:20226753-20226772 | Msa0243300:intron | 35.0% | |
ATGAGCATTAACAATCCCTA+TGG | - | chr2_2:20226821-20226840 | None:intergenic | 35.0% | |
GCTCATAAATCTAGATTCCT+TGG | + | chr2_2:20226835-20226854 | Msa0243300:intron | 35.0% | |
! | ACATTCTTTTTCCCACTTTG+GGG | - | chr2_2:20226988-20227007 | None:intergenic | 35.0% |
!! | CCCTATAAAGCATTTTTGCA+TGG | - | chr2_2:20227050-20227069 | None:intergenic | 35.0% |
!! | AAGGTTGATACTGAAGATGA+CGG | + | chr2_2:20227287-20227306 | Msa0243300:CDS | 35.0% |
TAAGGAAAATGCTCTGTCTT+AGG | - | chr2_2:20227504-20227523 | None:intergenic | 35.0% | |
! | ATTTCCCCCTTCTTTTCATA+AGG | - | chr2_2:20227522-20227541 | None:intergenic | 35.0% |
TATGAAAAGAAGGGGGAAAT+TGG | + | chr2_2:20227522-20227541 | Msa0243300:intron | 35.0% | |
GAAAACTGGACTATTGTGTA+GGG | + | chr2_2:20227544-20227563 | Msa0243300:intron | 35.0% | |
AAAACTGGACTATTGTGTAG+GGG | + | chr2_2:20227545-20227564 | Msa0243300:intron | 35.0% | |
ACACTGTTTCCTTCTTTGAT+GGG | + | chr2_2:20227590-20227609 | Msa0243300:intron | 35.0% | |
!!! | AATGGCCTGTCCATTTTTTT+CGG | + | chr2_2:20227682-20227701 | Msa0243300:intron | 35.0% |
TAAAGCCGAAAAAAATGGAC+AGG | - | chr2_2:20227690-20227709 | None:intergenic | 35.0% | |
GGGTATATGTATGTATATGC+TGG | + | chr2_2:20227719-20227738 | Msa0243300:intron | 35.0% | |
! | GGTAATTTGACTTTAGCATC+AGG | + | chr2_2:20227939-20227958 | Msa0243300:intron | 35.0% |
! | TACCTCTTTTGTGGGAAAAA+TGG | + | chr2_2:20228498-20228517 | Msa0243300:intron | 35.0% |
!! | TTCATTTGATTTGCATGTCG+AGG | - | chr2_2:20228852-20228871 | None:intergenic | 35.0% |
GAAAATTGAATCCTTCGACT+TGG | - | chr2_2:20228881-20228900 | None:intergenic | 35.0% | |
! | CAATTTTCTTGTCAGAAACC+TGG | + | chr2_2:20228893-20228912 | Msa0243300:CDS | 35.0% |
TGACAGTAGATCACAACAAT+TGG | + | chr2_2:20229130-20229149 | Msa0243300:CDS | 35.0% | |
ACTGTTGGTATCCTAAGAAA+AGG | - | chr2_2:20229190-20229209 | None:intergenic | 35.0% | |
!! | AGATAATGGACGAAAACTGT+TGG | - | chr2_2:20229205-20229224 | None:intergenic | 35.0% |
TAGGAACGAGAATACTGATA+CGG | + | chr2_2:20229316-20229335 | Msa0243300:CDS | 35.0% | |
!! | CCAAGAAAAGTTGTTTTGTC+CGG | + | chr2_2:20229365-20229384 | Msa0243300:CDS | 35.0% |
!! | CAAGAAAAGTTGTTTTGTCC+GGG | + | chr2_2:20229366-20229385 | Msa0243300:CDS | 35.0% |
CCATCTTTATAAACTTTGGG+CGG | - | chr2_2:20229442-20229461 | None:intergenic | 35.0% | |
TGTGAAAGACTTCTGTGATT+TGG | + | chr2_2:20229514-20229533 | Msa0243300:CDS | 35.0% | |
! | AGAAGGATCCGGATTTTAAA+AGG | + | chr2_2:20229552-20229571 | Msa0243300:CDS | 35.0% |
! | AGCTGTTATACATGATTTGC+GGG | + | chr2_2:20229580-20229599 | Msa0243300:CDS | 35.0% |
!! | AAGGTACTGCACTACTATAA+AGG | + | chr2_2:20229614-20229633 | Msa0243300:CDS | 35.0% |
! | TTAACTTCATGCTTTTGCCT+GGG | - | chr2_2:20229698-20229717 | None:intergenic | 35.0% |
AAGTTCAAGATGTCTTCTGT+AGG | + | chr2_2:20229740-20229759 | Msa0243300:CDS | 35.0% | |
TCACTACATTTCTCTGCAAT+TGG | - | chr2_2:20229797-20229816 | None:intergenic | 35.0% | |
! | TGGAAAGGTTAGCTATGAAA+TGG | + | chr2_2:20229975-20229994 | Msa0243300:CDS | 35.0% |
! | AAGGTTAGCTATGAAATGGA+AGG | + | chr2_2:20229979-20229998 | Msa0243300:CDS | 35.0% |
! | AGGTTAGCTATGAAATGGAA+GGG | + | chr2_2:20229980-20229999 | Msa0243300:CDS | 35.0% |
AAAATTCAACAATTCACCCG+AGG | + | chr2_2:20230075-20230094 | Msa0243300:CDS | 35.0% | |
! | GATTGACCCGAAAAAGATTT+TGG | - | chr2_2:20230101-20230120 | None:intergenic | 35.0% |
! | ACACAAACACTTTCCTTTTC+TGG | - | chr2_2:20230237-20230256 | None:intergenic | 35.0% |
TCTAGAAAGTCCATTGTTAG+GGG | + | chr2_2:20230414-20230433 | Msa0243300:CDS | 35.0% | |
TTTACATCTTCCCCTAACAA+TGG | - | chr2_2:20230427-20230446 | None:intergenic | 35.0% | |
! | GTGGTCTAACCTTTTATACA+GGG | - | chr2_2:20230452-20230471 | None:intergenic | 35.0% |
! | AGTGGTCTAACCTTTTATAC+AGG | - | chr2_2:20230453-20230472 | None:intergenic | 35.0% |
! | AGTGAGAGAATAGGGTTTTG+AGG | - | chr2_2:20223791-20223810 | None:intergenic | 40.0% |
AGGACGCCATTGATGAAATT+TGG | - | chr2_2:20223834-20223853 | None:intergenic | 40.0% | |
ATGTAATACCGGATGAAGCA+GGG | - | chr2_2:20223867-20223886 | None:intergenic | 40.0% | |
AATGTAATACCGGATGAAGC+AGG | - | chr2_2:20223868-20223887 | None:intergenic | 40.0% | |
GGACAATGGTGATTTAACTC+AGG | - | chr2_2:20224073-20224092 | None:intergenic | 40.0% | |
! | GATTTGTCCATGTTTTCGTG+AGG | + | chr2_2:20224120-20224139 | Msa0243300:intron | 40.0% |
ACCCTTAAGTAAAGGCTGTA+GGG | + | chr2_2:20224256-20224275 | Msa0243300:intron | 40.0% | |
ACCCTACAGCCTTTACTTAA+GGG | - | chr2_2:20224260-20224279 | None:intergenic | 40.0% | |
!! | TGTTGATGCTAGAGAGCATT+TGG | + | chr2_2:20224290-20224309 | Msa0243300:intron | 40.0% |
TCGAGTAACTTCGTCATTTC+AGG | - | chr2_2:20224336-20224355 | None:intergenic | 40.0% | |
AAACCCTCCATCCAAACAAA+TGG | - | chr2_2:20224404-20224423 | None:intergenic | 40.0% | |
!!! | TTTGGATGGAGGGTTTTAGA+GGG | + | chr2_2:20224408-20224427 | Msa0243300:intron | 40.0% |
CTGTATACTTCAAGCACTAC+AGG | - | chr2_2:20224572-20224591 | None:intergenic | 40.0% | |
CTGTAGTGCTTGAAGTATAC+AGG | + | chr2_2:20224570-20224589 | Msa0243300:intron | 40.0% | |
AGTGCTTGAAGTATACAGGT+AGG | + | chr2_2:20224574-20224593 | Msa0243300:intron | 40.0% | |
GTGCTTGAAGTATACAGGTA+GGG | + | chr2_2:20224575-20224594 | Msa0243300:intron | 40.0% | |
TGCTTGAAGTATACAGGTAG+GGG | + | chr2_2:20224576-20224595 | Msa0243300:intron | 40.0% | |
! | CAGAAAATGATGGTGTGTGT+AGG | + | chr2_2:20224643-20224662 | Msa0243300:intron | 40.0% |
CGCTTAGAGAGTGGAAAATT+TGG | + | chr2_2:20225119-20225138 | Msa0243300:CDS | 40.0% | |
TGATGAAGAAACTCCCAACA+TGG | + | chr2_2:20225256-20225275 | Msa0243300:CDS | 40.0% | |
GTCATAGATTTGGATTCGGA+CGG | + | chr2_2:20225314-20225333 | Msa0243300:CDS | 40.0% | |
TCATAGATTTGGATTCGGAC+GGG | + | chr2_2:20225315-20225334 | Msa0243300:CDS | 40.0% | |
!! | TGGTGCCAAAACATCCTTTT+CGG | - | chr2_2:20225348-20225367 | None:intergenic | 40.0% |
!!! | GATGTTTTGGCACCAGAAAA+AGG | + | chr2_2:20225353-20225372 | Msa0243300:CDS | 40.0% |
TTCAGATGAGGAGGATGATA+AGG | + | chr2_2:20225409-20225428 | Msa0243300:CDS | 40.0% | |
!! | ACATTTTGATGGGAGATACC+AGG | - | chr2_2:20225503-20225522 | None:intergenic | 40.0% |
ATGACTTCATGAAATGGTGC+TGG | - | chr2_2:20225605-20225624 | None:intergenic | 40.0% | |
TGATGAAGAAACTCCCAACA+TGG | + | chr2_2:20225256-20225275 | Msa0243300:CDS | 40.0% | |
GATGATAGGGATCATGATGA+AGG | + | chr2_2:20225743-20225762 | Msa0243300:CDS | 40.0% | |
GGCAATGCAACTTCATGAAA+TGG | - | chr2_2:20225869-20225888 | None:intergenic | 40.0% | |
!! | CATTTGGGTTGTATCCTTCT+TGG | + | chr2_2:20225965-20225984 | Msa0243300:intron | 40.0% |
! | TAAAGTGGAATCTTCTGGAG+AGG | + | chr2_2:20226143-20226162 | Msa0243300:intron | 40.0% |
ATTGGGACACTTGAGACAAA+AGG | - | chr2_2:20226511-20226530 | None:intergenic | 40.0% | |
TTGTCTCAAGTGTCCCAATT+TGG | + | chr2_2:20226512-20226531 | Msa0243300:intron | 40.0% | |
!! | ATTTCTGGTACCTTGTTGCT+TGG | + | chr2_2:20226583-20226602 | Msa0243300:intron | 40.0% |
TGCATAACTACCAAGCAACA+AGG | - | chr2_2:20226596-20226615 | None:intergenic | 40.0% | |
TCTTTATGTTGGTGTACGTG+AGG | + | chr2_2:20227253-20227272 | Msa0243300:CDS | 40.0% | |
ACGTGAGGAAGAAGATAACA+AGG | + | chr2_2:20227268-20227287 | Msa0243300:CDS | 40.0% | |
!! | AGGTTGATACTGAAGATGAC+GGG | + | chr2_2:20227288-20227307 | Msa0243300:CDS | 40.0% |
AAACAGGTCACAAACGAGTA+GGG | - | chr2_2:20227428-20227447 | None:intergenic | 40.0% | |
AAAACAGGTCACAAACGAGT+AGG | - | chr2_2:20227429-20227448 | None:intergenic | 40.0% | |
GGAAAACTGGACTATTGTGT+AGG | + | chr2_2:20227543-20227562 | Msa0243300:intron | 40.0% | |
GACACTGTTTCCTTCTTTGA+TGG | + | chr2_2:20227589-20227608 | Msa0243300:intron | 40.0% | |
AGTAACAAGCCCATCAAAGA+AGG | - | chr2_2:20227602-20227621 | None:intergenic | 40.0% | |
GGCATACCAAAGAGAAAGAA+AGG | - | chr2_2:20227840-20227859 | None:intergenic | 40.0% | |
ATCTGCAGAAACATCCTAGT+AGG | - | chr2_2:20228133-20228152 | None:intergenic | 40.0% | |
!! | AGCGTCATTTTCCTCTTCTT+CGG | - | chr2_2:20228163-20228182 | None:intergenic | 40.0% |
GTTATGTTTGTCGCGTTTGT+GGG | + | chr2_2:20228220-20228239 | Msa0243300:CDS | 40.0% | |
TTATGTTTGTCGCGTTTGTG+GGG | + | chr2_2:20228221-20228240 | Msa0243300:CDS | 40.0% | |
TCCAATACAAGGTTAGACAC+TGG | + | chr2_2:20228277-20228296 | Msa0243300:intron | 40.0% | |
ACCAGTGTCTAACCTTGTAT+TGG | - | chr2_2:20228281-20228300 | None:intergenic | 40.0% | |
!! | GTTTCAGGTACCTCTTTTGT+GGG | + | chr2_2:20228490-20228509 | Msa0243300:intron | 40.0% |
!! | CACCATTTTTCCCACAAAAG+AGG | - | chr2_2:20228503-20228522 | None:intergenic | 40.0% |
! | TTTTCTTGTCAGAAACCTGG+TGG | + | chr2_2:20228896-20228915 | Msa0243300:CDS | 40.0% |
TTTCTTGTCAGAAACCTGGT+GGG | + | chr2_2:20228897-20228916 | Msa0243300:CDS | 40.0% | |
ATGAATGTCTTTCCAGATCC+TGG | - | chr2_2:20228957-20228976 | None:intergenic | 40.0% | |
AGGATCTGGAAAGACATTCA+TGG | + | chr2_2:20228956-20228975 | Msa0243300:CDS | 40.0% | |
CAAGTCGATAGTATTCCCTT+AGG | - | chr2_2:20229044-20229063 | None:intergenic | 40.0% | |
! | CTAAGGGAATACTATCGACT+TGG | + | chr2_2:20229042-20229061 | Msa0243300:CDS | 40.0% |
GGAAAAAGGAGTTTCTGACA+TGG | + | chr2_2:20229063-20229082 | Msa0243300:CDS | 40.0% | |
GTATCAGTATTCTCGTTCCT+AGG | - | chr2_2:20229317-20229336 | None:intergenic | 40.0% | |
! | TGGTGTTTGTACTTTTGCGA+GGG | - | chr2_2:20229348-20229367 | None:intergenic | 40.0% |
!! | TTGGTGTTTGTACTTTTGCG+AGG | - | chr2_2:20229349-20229368 | None:intergenic | 40.0% |
! | CCGGACAAAACAACTTTTCT+TGG | - | chr2_2:20229368-20229387 | None:intergenic | 40.0% |
TTATAAACTTTGGGCGGACA+AGG | - | chr2_2:20229436-20229455 | None:intergenic | 40.0% | |
CCGCCCAAAGTTTATAAAGA+TGG | + | chr2_2:20229439-20229458 | Msa0243300:CDS | 40.0% | |
AACCTATTGTCCAACGCATT+AGG | + | chr2_2:20229471-20229490 | Msa0243300:CDS | 40.0% | |
AGTCTTTCACACCAGGTAAA+TGG | - | chr2_2:20229505-20229524 | None:intergenic | 40.0% | |
GGTTGAAAACACTTTGCAGA+AGG | + | chr2_2:20229535-20229554 | Msa0243300:CDS | 40.0% | |
AAACACTTTGCAGAAGGATC+CGG | + | chr2_2:20229541-20229560 | Msa0243300:CDS | 40.0% | |
! | GATTTTCTTGATGAGCTTCC+TGG | + | chr2_2:20229638-20229657 | Msa0243300:CDS | 40.0% |
ACAGTAAAATCAACTAGGCC+AGG | - | chr2_2:20229659-20229678 | None:intergenic | 40.0% | |
!! | TGGCCTAGTTGATTTTACTG+TGG | + | chr2_2:20229658-20229677 | Msa0243300:CDS | 40.0% |
GCACCACAGTAAAATCAACT+AGG | - | chr2_2:20229664-20229683 | None:intergenic | 40.0% | |
! | CTTAACTTCATGCTTTTGCC+TGG | - | chr2_2:20229699-20229718 | None:intergenic | 40.0% |
! | CTGCAATTGGTTTCAAGTCT+GGG | - | chr2_2:20229784-20229803 | None:intergenic | 40.0% |
! | TCTGCAATTGGTTTCAAGTC+TGG | - | chr2_2:20229785-20229804 | None:intergenic | 40.0% |
AGAATCGTCCACTGAACAAA+GGG | + | chr2_2:20230039-20230058 | Msa0243300:CDS | 40.0% | |
TCAATCAAAGCATGTGGTGA+GGG | + | chr2_2:20230115-20230134 | Msa0243300:CDS | 40.0% | |
ATAGCTTGACGAGTAACAGA+CGG | - | chr2_2:20230193-20230212 | None:intergenic | 40.0% | |
TCTGTTACTCGTCAAGCTAT+TGG | + | chr2_2:20230193-20230212 | Msa0243300:CDS | 40.0% | |
TCACAGTACTTGTGTCAAGA+AGG | + | chr2_2:20230294-20230313 | Msa0243300:CDS | 40.0% | |
!! | AGTTGAGAGAGTTGATGTGA+AGG | + | chr2_2:20230375-20230394 | Msa0243300:CDS | 40.0% |
!! | AGAGTTGATGTGAAGGAATG+TGG | + | chr2_2:20230382-20230401 | Msa0243300:CDS | 40.0% |
TTACTTAAGGGTGGAGGGAA+AGG | - | chr2_2:20224248-20224267 | None:intergenic | 45.0% | |
TTCCCTCCACCCTTAAGTAA+AGG | + | chr2_2:20224248-20224267 | Msa0243300:intron | 45.0% | |
AGCCTTTACTTAAGGGTGGA+GGG | - | chr2_2:20224253-20224272 | None:intergenic | 45.0% | |
CTACAGCCTTTACTTAAGGG+TGG | - | chr2_2:20224257-20224276 | None:intergenic | 45.0% | |
CACCCTTAAGTAAAGGCTGT+AGG | + | chr2_2:20224255-20224274 | Msa0243300:intron | 45.0% | |
CACCCTACAGCCTTTACTTA+AGG | - | chr2_2:20224261-20224280 | None:intergenic | 45.0% | |
CTTAAGTAAAGGCTGTAGGG+TGG | + | chr2_2:20224259-20224278 | Msa0243300:intron | 45.0% | |
!! | GATGCTAGAGAGCATTTGGT+TGG | + | chr2_2:20224294-20224313 | Msa0243300:intron | 45.0% |
!! | AGAGAGCATTTGGTTGGATG+TGG | + | chr2_2:20224300-20224319 | Msa0243300:intron | 45.0% |
!! | GTTTGGATGGAGGGTTTTAG+AGG | + | chr2_2:20224407-20224426 | Msa0243300:intron | 45.0% |
!!! | TGGAGGGTTTTAGAGGGAAA+AGG | + | chr2_2:20224414-20224433 | Msa0243300:intron | 45.0% |
!!! | GGAGGGTTTTAGAGGGAAAA+GGG | + | chr2_2:20224415-20224434 | Msa0243300:intron | 45.0% |
!!! | GAGGGTTTTAGAGGGAAAAG+GGG | + | chr2_2:20224416-20224435 | Msa0243300:intron | 45.0% |
! | CAGATGCACTTGTTGGAACA+TGG | + | chr2_2:20224756-20224775 | Msa0243300:intron | 45.0% |
CGCTTGCCATGTTTAACACA+TGG | + | chr2_2:20225047-20225066 | Msa0243300:CDS | 45.0% | |
CATAGATTTGGATTCGGACG+GGG | + | chr2_2:20225316-20225335 | Msa0243300:CDS | 45.0% | |
! | GCACACCGAAAAGGATGTTT+TGG | + | chr2_2:20225340-20225359 | Msa0243300:CDS | 45.0% |
GAGGAGGATGATAAGGATCA+TGG | + | chr2_2:20225416-20225435 | Msa0243300:CDS | 45.0% | |
! | ACTTCATGAAATGGTGCTGG+AGG | - | chr2_2:20225602-20225621 | None:intergenic | 45.0% |
TGATGAAGGAACTCCCAACA+TGG | + | chr2_2:20225757-20225776 | Msa0243300:CDS | 45.0% | |
TCTAATGCAGGAGACTGAAC+TGG | - | chr2_2:20225896-20225915 | None:intergenic | 45.0% | |
TCAGTCAAATCAGCCCAAGA+AGG | - | chr2_2:20225982-20226001 | None:intergenic | 45.0% | |
CTAGAATCTTCCGCCACAAA+TGG | - | chr2_2:20226024-20226043 | None:intergenic | 45.0% | |
TCGTAGCCTCATAGGAGTAA+AGG | - | chr2_2:20226719-20226738 | None:intergenic | 45.0% | |
TATCTAGCCAACCCCAAAGT+GGG | + | chr2_2:20226974-20226993 | Msa0243300:intron | 45.0% | |
!!! | TCTTTTTCCCACTTTGGGGT+TGG | - | chr2_2:20226984-20227003 | None:intergenic | 45.0% |
CATGATCCCAATGCTTACCA+TGG | + | chr2_2:20227074-20227093 | Msa0243300:CDS | 45.0% | |
TCTCCTCCATGGTAAGCATT+GGG | - | chr2_2:20227083-20227102 | None:intergenic | 45.0% | |
TTCTCCTCCATGGTAAGCAT+TGG | - | chr2_2:20227084-20227103 | None:intergenic | 45.0% | |
!! | ATGACGGGCTAGAAGATGTT+TGG | + | chr2_2:20227303-20227322 | Msa0243300:CDS | 45.0% |
AGAAGATGTTTGGAGGGAGA+TGG | + | chr2_2:20227313-20227332 | Msa0243300:CDS | 45.0% | |
AACAGGTCACAAACGAGTAG+GGG | - | chr2_2:20227427-20227446 | None:intergenic | 45.0% | |
GAAGGGGGAAATTGGAAAAC+TGG | + | chr2_2:20227530-20227549 | Msa0243300:intron | 45.0% | |
! | TCATTTTCCTCTTCTTCGGG+TGG | - | chr2_2:20228159-20228178 | None:intergenic | 45.0% |
!! | GCGTCATTTTCCTCTTCTTC+GGG | - | chr2_2:20228162-20228181 | None:intergenic | 45.0% |
GGTTATGTTTGTCGCGTTTG+TGG | + | chr2_2:20228219-20228238 | Msa0243300:CDS | 45.0% | |
GTTTGTGGGGTTATTGACAG+AGG | + | chr2_2:20228234-20228253 | Msa0243300:CDS | 45.0% | |
!! | GGTTTCAGGTACCTCTTTTG+TGG | + | chr2_2:20228489-20228508 | Msa0243300:intron | 45.0% |
!! | TTGAATCCTTCGACTTGGTG+CGG | - | chr2_2:20228876-20228895 | None:intergenic | 45.0% |
GGAAGTCTTAAAACAGTGGG+TGG | + | chr2_2:20229151-20229170 | Msa0243300:CDS | 45.0% | |
CTCCTAATGCGTTGGACAAT+AGG | - | chr2_2:20229476-20229495 | None:intergenic | 45.0% | |
TTGTCCAACGCATTAGGAGT+AGG | + | chr2_2:20229477-20229496 | Msa0243300:CDS | 45.0% | |
AGGAGTAGGATCCATTTACC+TGG | + | chr2_2:20229491-20229510 | Msa0243300:CDS | 45.0% | |
TCACAGAAGTCTTTCACACC+AGG | - | chr2_2:20229512-20229531 | None:intergenic | 45.0% | |
ATAGTAGTGCAGTACCTTGC+TGG | - | chr2_2:20229612-20229631 | None:intergenic | 45.0% | |
CTGAATCTATGCCAATCAGC+TGG | + | chr2_2:20229905-20229924 | Msa0243300:CDS | 45.0% | |
AAAGCTTCTCACCAGCTGAT+TGG | - | chr2_2:20229919-20229938 | None:intergenic | 45.0% | |
! | ATCAGCTGGTGAGAAGCTTT+TGG | + | chr2_2:20229919-20229938 | Msa0243300:CDS | 45.0% |
TAGCTATGAAATGGAAGGGC+TGG | + | chr2_2:20229984-20230003 | Msa0243300:CDS | 45.0% | |
GAGAATCGTCCACTGAACAA+AGG | + | chr2_2:20230038-20230057 | Msa0243300:CDS | 45.0% | |
!! | CCGAAAAAGATTTTGGCCTC+GGG | - | chr2_2:20230094-20230113 | None:intergenic | 45.0% |
! | CCCGAGGCCAAAATCTTTTT+CGG | + | chr2_2:20230091-20230110 | Msa0243300:CDS | 45.0% |
!! | CCCGAAAAAGATTTTGGCCT+CGG | - | chr2_2:20230095-20230114 | None:intergenic | 45.0% |
! | CCGAGGCCAAAATCTTTTTC+GGG | + | chr2_2:20230092-20230111 | Msa0243300:CDS | 45.0% |
TTCGGGTCAATCAAAGCATG+TGG | + | chr2_2:20230109-20230128 | Msa0243300:CDS | 45.0% | |
GTCAATCAAAGCATGTGGTG+AGG | + | chr2_2:20230114-20230133 | Msa0243300:CDS | 45.0% | |
! | ATGTGGTGAGGGTATATCAC+TGG | + | chr2_2:20230126-20230145 | Msa0243300:CDS | 45.0% |
! | GTGAGGGTATATCACTGGTT+GGG | + | chr2_2:20230131-20230150 | Msa0243300:CDS | 45.0% |
! | TGAGGGTATATCACTGGTTG+GGG | + | chr2_2:20230132-20230151 | Msa0243300:CDS | 45.0% |
TAGCTTGACGAGTAACAGAC+GGG | - | chr2_2:20230192-20230211 | None:intergenic | 45.0% | |
!! | AACACTTTCCTTTTCTGGCC+TGG | - | chr2_2:20230232-20230251 | None:intergenic | 45.0% |
GTACTGTGATCTTCCTCTTC+TGG | - | chr2_2:20230283-20230302 | None:intergenic | 45.0% | |
AGTAAACGCCCTGCTTCATC+CGG | + | chr2_2:20223856-20223875 | Msa0243300:CDS | 50.0% | |
CAGCCTTTACTTAAGGGTGG+AGG | - | chr2_2:20224254-20224273 | None:intergenic | 50.0% | |
GAGCATTTGGTTGGATGTGG+TGG | + | chr2_2:20224303-20224322 | Msa0243300:intron | 50.0% | |
CATTTGGTTGGATGTGGTGG+TGG | + | chr2_2:20224306-20224325 | Msa0243300:intron | 50.0% | |
GCATCTGTGCATGCATCCTA+AGG | - | chr2_2:20224743-20224762 | None:intergenic | 50.0% | |
GCATGCACAGATGCACTTGT+TGG | + | chr2_2:20224749-20224768 | Msa0243300:intron | 50.0% | |
CCTTCTTCAGGCGAAATTCC+TGG | - | chr2_2:20224999-20225018 | None:intergenic | 50.0% | |
CCAGGAATTTCGCCTGAAGA+AGG | + | chr2_2:20224996-20225015 | Msa0243300:intron | 50.0% | |
!! | GCAGGAGACTGAACTGGTTT+TGG | - | chr2_2:20225890-20225909 | None:intergenic | 50.0% |
! | GGAATCTTCTGGAGAGGAAG+AGG | + | chr2_2:20226149-20226168 | Msa0243300:intron | 50.0% |
GATGTGAGTCGTAGCCTCAT+AGG | - | chr2_2:20226727-20226746 | None:intergenic | 50.0% | |
CTATCTAGCCAACCCCAAAG+TGG | + | chr2_2:20226973-20226992 | Msa0243300:intron | 50.0% | |
GATCCCAATGCTTACCATGG+AGG | + | chr2_2:20227077-20227096 | Msa0243300:CDS | 50.0% | |
GATCTGCATGTTCTCCTCCA+TGG | - | chr2_2:20227094-20227113 | None:intergenic | 50.0% | |
!! | ACGGGCTAGAAGATGTTTGG+AGG | + | chr2_2:20227306-20227325 | Msa0243300:CDS | 50.0% |
! | CGGGCTAGAAGATGTTTGGA+GGG | + | chr2_2:20227307-20227326 | Msa0243300:CDS | 50.0% |
TGTTTGGAGGGAGATGGCAA+TGG | + | chr2_2:20227319-20227338 | Msa0243300:CDS | 50.0% | |
ACAGGTCACAAACGAGTAGG+GGG | - | chr2_2:20227426-20227445 | None:intergenic | 50.0% | |
AGATCATCCACCCGAAGAAG+AGG | + | chr2_2:20228149-20228168 | Msa0243300:CDS | 50.0% | |
ATGAAACCGCACCAAGTCGA+AGG | + | chr2_2:20228867-20228886 | Msa0243300:CDS | 50.0% | |
GGAGTTTCTGACATGGCAAG+TGG | + | chr2_2:20229070-20229089 | Msa0243300:CDS | 50.0% | |
TAGATGAGGGACACACTCCT+AGG | + | chr2_2:20229297-20229316 | Msa0243300:CDS | 50.0% | |
GGATCCTACTCCTAATGCGT+TGG | - | chr2_2:20229484-20229503 | None:intergenic | 50.0% | |
! | TTGGTTTCAAGTCTGGGTGC+AGG | - | chr2_2:20229778-20229797 | None:intergenic | 50.0% |
GCGAACCAAGATGTGAGAGA+CGG | + | chr2_2:20229854-20229873 | Msa0243300:CDS | 50.0% | |
CGAACCAAGATGTGAGAGAC+GGG | + | chr2_2:20229855-20229874 | Msa0243300:CDS | 50.0% | |
GAACCAAGATGTGAGAGACG+GGG | + | chr2_2:20229856-20229875 | Msa0243300:CDS | 50.0% | |
AAATGGAAGGGCTGGAGTCT+TGG | + | chr2_2:20229992-20230011 | Msa0243300:CDS | 50.0% | |
!! | TGAACAAAGGGAGTGCTCCA+TGG | + | chr2_2:20230051-20230070 | Msa0243300:CDS | 50.0% |
! | GGTGAGGGTATATCACTGGT+TGG | + | chr2_2:20230130-20230149 | Msa0243300:CDS | 50.0% |
!! | CTTTCCTTTTCTGGCCTGGT+CGG | - | chr2_2:20230228-20230247 | None:intergenic | 50.0% |
!! | AGCTGCTGATTCTCCAGAAG+AGG | + | chr2_2:20230267-20230286 | Msa0243300:CDS | 50.0% |
! | TGAAGCAGGGCGTTTACTGG+AGG | - | chr2_2:20223854-20223873 | None:intergenic | 55.0% |
! | GGATGAAGCAGGGCGTTTAC+TGG | - | chr2_2:20223857-20223876 | None:intergenic | 55.0% |
GAGGGAGATGGCAATGGCAA+TGG | + | chr2_2:20227325-20227344 | Msa0243300:CDS | 55.0% | |
CAGGTCACAAACGAGTAGGG+GGG | - | chr2_2:20227425-20227444 | None:intergenic | 55.0% | |
TCTGCATGCGCGCTGTTCTT+TGG | + | chr2_2:20227999-20228018 | Msa0243300:intron | 55.0% | |
!! | TGCATTCTGGCTCATGCTCC+AGG | + | chr2_2:20228936-20228955 | Msa0243300:CDS | 55.0% |
ACCTCTCGTGGTGCTTCCTA+AGG | + | chr2_2:20229025-20229044 | Msa0243300:CDS | 55.0% | |
CCTCTCGTGGTGCTTCCTAA+GGG | + | chr2_2:20229026-20229045 | Msa0243300:CDS | 55.0% | |
TTTGCGGGAGATGACCAGCA+AGG | + | chr2_2:20229595-20229614 | Msa0243300:CDS | 55.0% | |
TGGTGCTCAACATGACACCC+AGG | + | chr2_2:20229678-20229697 | Msa0243300:CDS | 55.0% | |
TCACCCCGTCTCTCACATCT+TGG | - | chr2_2:20229862-20229881 | None:intergenic | 55.0% | |
! | GGAGCACTCCCTTTGTTCAG+TGG | - | chr2_2:20230050-20230069 | None:intergenic | 55.0% |
!! | GACGAGTAACAGACGGGTTG+AGG | - | chr2_2:20230186-20230205 | None:intergenic | 55.0% |
CTTTCCGACCAGGCCAGAAA+AGG | + | chr2_2:20230221-20230240 | Msa0243300:CDS | 55.0% | |
AACCTGGTGGGAGACCATCC+TGG | + | chr2_2:20228909-20228928 | Msa0243300:CDS | 60.0% | |
ACCTGGTGGGAGACCATCCT+GGG | + | chr2_2:20228910-20228929 | Msa0243300:CDS | 60.0% | |
CCAGAATGCATCCCCCAGGA+TGG | - | chr2_2:20228926-20228945 | None:intergenic | 60.0% | |
CCATCCTGGGGGATGCATTC+TGG | + | chr2_2:20228923-20228942 | Msa0243300:CDS | 60.0% | |
TGAGCCAGAATGCATCCCCC+AGG | - | chr2_2:20228930-20228949 | None:intergenic | 60.0% | |
CTGGCTCATGCTCCAGGATC+TGG | + | chr2_2:20228942-20228961 | Msa0243300:CDS | 60.0% | |
ACCACGAGAGGTCGTGCATC+GGG | - | chr2_2:20229017-20229036 | None:intergenic | 60.0% | |
CACCACGAGAGGTCGTGCAT+CGG | - | chr2_2:20229018-20229037 | None:intergenic | 60.0% | |
!! | CCCTTAGGAAGCACCACGAG+AGG | - | chr2_2:20229029-20229048 | None:intergenic | 60.0% |
ATTGGCCGTGCTTTCCGACC+AGG | + | chr2_2:20230211-20230230 | Msa0243300:CDS | 60.0% | |
TCTGGCCTGGTCGGAAAGCA+CGG | - | chr2_2:20230219-20230238 | None:intergenic | 60.0% | |
! | GGACGGGGAGCACACCGAAA+AGG | + | chr2_2:20225331-20225350 | Msa0243300:CDS | 65.0% |
CCTGGTGGGAGACCATCCTG+GGG | + | chr2_2:20228911-20228930 | Msa0243300:CDS | 65.0% | |
CTGGTGGGAGACCATCCTGG+GGG | + | chr2_2:20228912-20228931 | Msa0243300:CDS | 65.0% | |
TCCCGATGCACGACCTCTCG+TGG | + | chr2_2:20229013-20229032 | Msa0243300:CDS | 65.0% | |
CCCCAGGATGGTCTCCCACC+AGG | - | chr2_2:20228914-20228933 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 20223775 | 20230558 | 20223775 | ID=Msa0243300;Name=Msa0243300 |
chr2_2 | mRNA | 20223775 | 20230558 | 20223775 | ID=Msa0243300-mRNA-1;Parent=Msa0243300;Name=Msa0243300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=69|0.2|0.16|0.83|1|1|6|0|1043 |
chr2_2 | exon | 20223775 | 20223877 | 20223775 | ID=Msa0243300-mRNA-1:exon:8157;Parent=Msa0243300-mRNA-1 |
chr2_2 | exon | 20225000 | 20225922 | 20225000 | ID=Msa0243300-mRNA-1:exon:8158;Parent=Msa0243300-mRNA-1 |
chr2_2 | exon | 20227068 | 20227358 | 20227068 | ID=Msa0243300-mRNA-1:exon:8159;Parent=Msa0243300-mRNA-1 |
chr2_2 | exon | 20228138 | 20228287 | 20228138 | ID=Msa0243300-mRNA-1:exon:8160;Parent=Msa0243300-mRNA-1 |
chr2_2 | exon | 20228732 | 20230461 | 20228732 | ID=Msa0243300-mRNA-1:exon:8161;Parent=Msa0243300-mRNA-1 |
chr2_2 | exon | 20230555 | 20230558 | 20230555 | ID=Msa0243300-mRNA-1:exon:8162;Parent=Msa0243300-mRNA-1 |
chr2_2 | five_prime_UTR | 20223775 | 20223843 | 20223775 | ID=Msa0243300-mRNA-1:five_prime_utr;Parent=Msa0243300-mRNA-1 |
chr2_2 | CDS | 20223844 | 20223877 | 20223844 | ID=Msa0243300-mRNA-1:cds;Parent=Msa0243300-mRNA-1 |
chr2_2 | CDS | 20225000 | 20225922 | 20225000 | ID=Msa0243300-mRNA-1:cds;Parent=Msa0243300-mRNA-1 |
chr2_2 | CDS | 20227068 | 20227358 | 20227068 | ID=Msa0243300-mRNA-1:cds;Parent=Msa0243300-mRNA-1 |
chr2_2 | CDS | 20228138 | 20228287 | 20228138 | ID=Msa0243300-mRNA-1:cds;Parent=Msa0243300-mRNA-1 |
chr2_2 | CDS | 20228732 | 20230461 | 20228732 | ID=Msa0243300-mRNA-1:cds;Parent=Msa0243300-mRNA-1 |
chr2_2 | CDS | 20230555 | 20230558 | 20230555 | ID=Msa0243300-mRNA-1:cds;Parent=Msa0243300-mRNA-1 |
Gene Sequence |
Protein sequence |