Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245730 | AES65503.1 | 80.142 | 141 | 27 | 1 | 1 | 141 | 863 | 1002 | 1.42e-69 | 240 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245730 | G7IQ90 | 80.142 | 141 | 27 | 1 | 1 | 141 | 863 | 1002 | 6.78e-70 | 240 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0245730 | Msa0279510 | 0.806479 | 8.064889e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245730 | MtrunA17_Chr2g0299791 | 80.142 | 141 | 27 | 1 | 1 | 141 | 796 | 935 | 1.35e-73 | 240 |
| Msa0245730 | MtrunA17_Chr2g0299811 | 79.433 | 141 | 25 | 2 | 1 | 141 | 643 | 779 | 1.20e-69 | 226 |
| Msa0245730 | MtrunA17_Chr2g0299881 | 75.887 | 141 | 33 | 1 | 1 | 141 | 800 | 939 | 1.76e-67 | 223 |
| Msa0245730 | MtrunA17_Chr2g0299921 | 76.596 | 141 | 29 | 2 | 1 | 141 | 794 | 930 | 1.29e-66 | 220 |
| Msa0245730 | MtrunA17_Chr2g0299851 | 75.887 | 141 | 30 | 2 | 1 | 141 | 795 | 931 | 1.12e-65 | 217 |
| Msa0245730 | MtrunA17_Chr2g0299841 | 65.972 | 144 | 46 | 1 | 1 | 141 | 837 | 980 | 1.30e-54 | 186 |
| Msa0245730 | MtrunA17_Chr3g0084731 | 44.218 | 147 | 76 | 1 | 1 | 141 | 796 | 942 | 1.14e-31 | 120 |
| Msa0245730 | MtrunA17_Chr3g0084741 | 44.755 | 143 | 66 | 2 | 1 | 140 | 41 | 173 | 3.09e-28 | 105 |
| Msa0245730 | MtrunA17_Chr3g0084721 | 43.243 | 148 | 77 | 2 | 1 | 141 | 798 | 945 | 5.12e-28 | 109 |
| Msa0245730 | MtrunA17_Chr3g0084851 | 45.205 | 146 | 69 | 2 | 1 | 140 | 798 | 938 | 7.99e-28 | 109 |
| Msa0245730 | MtrunA17_Chr3g0084841 | 41.379 | 145 | 81 | 1 | 1 | 141 | 799 | 943 | 1.65e-24 | 99.8 |
| Msa0245730 | MtrunA17_Chr7g0262821 | 76.596 | 47 | 5 | 1 | 141 | 181 | 603 | 649 | 1.83e-15 | 73.6 |
| Msa0245730 | MtrunA17_Chr2g0299831 | 73.913 | 46 | 6 | 1 | 141 | 180 | 2 | 47 | 8.23e-14 | 63.5 |
| Msa0245730 | MtrunA17_Chr2g0299901 | 68.889 | 45 | 8 | 1 | 141 | 179 | 2 | 46 | 1.56e-12 | 59.7 |
| Msa0245730 | MtrunA17_Chr7g0223291 | 65.957 | 47 | 10 | 2 | 141 | 181 | 603 | 649 | 1.53e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTACTTCTATGAAATTAT+TGG | 0.189420 | 2_2:-25606442 | None:intergenic |
| ACTACTTCTATGAAATTATT+GGG | 0.284998 | 2_2:-25606441 | None:intergenic |
| TTTCTGAAGGAAAAGGAAAT+TGG | 0.288526 | 2_2:+25606514 | Msa0245730:CDS |
| CCTTCTGGTGCAGGTGGTGC+TGG | 0.297348 | 2_2:+25610564 | Msa0245730:CDS |
| GACATGGATGATGCTCCTTC+TGG | 0.331325 | 2_2:+25610549 | Msa0245730:CDS |
| TGGTACATCTTGGCAATGAT+AGG | 0.336601 | 2_2:-25610510 | None:intergenic |
| AGCACAACACAGAGCTATCT+TGG | 0.354613 | 2_2:-25606592 | None:intergenic |
| TGGTGCTGGCTGTAAGATTA+AGG | 0.357043 | 2_2:+25610578 | Msa0245730:CDS |
| GCCATGCTTGTTTATAAAGA+AGG | 0.398686 | 2_2:+25606378 | None:intergenic |
| AAGTTAAGTGTTCTCATCAA+TGG | 0.408874 | 2_2:+25606657 | Msa0245730:CDS |
| TTTCTTGATAATATTGATGT+TGG | 0.415093 | 2_2:+25606474 | Msa0245730:CDS |
| TTCTTGATAATATTGATGTT+GGG | 0.417354 | 2_2:+25606475 | Msa0245730:CDS |
| GATCATATTTAGAGCATGAA+TGG | 0.439841 | 2_2:+25606775 | Msa0245730:CDS |
| AGAGAGATTTCTGAAGGAAA+AGG | 0.447567 | 2_2:+25606507 | Msa0245730:CDS |
| GATGATGCTCCTTCTGGTGC+AGG | 0.457836 | 2_2:+25610555 | Msa0245730:CDS |
| TGCACCACCTTGGTACATCT+TGG | 0.469054 | 2_2:-25610520 | None:intergenic |
| GCACAACACAGAGCTATCTT+GGG | 0.470884 | 2_2:-25606591 | None:intergenic |
| TATGTGATTTAGCGTGCAAA+GGG | 0.496836 | 2_2:+25606748 | Msa0245730:CDS |
| TCCTTCTTTATAAACAAGCA+TGG | 0.501084 | 2_2:-25606379 | None:intergenic |
| AAGATGTACCAAGGTGGTGC+AGG | 0.511591 | 2_2:+25610522 | Msa0245730:CDS |
| GTGTAAATACAATATGTTGT+TGG | 0.511799 | 2_2:+25606629 | Msa0245730:CDS |
| CTATGTGATTTAGCGTGCAA+AGG | 0.519782 | 2_2:+25606747 | Msa0245730:CDS |
| GAAGGAGCATCATCCATGTC+AGG | 0.525119 | 2_2:-25610546 | None:intergenic |
| GGTACATCTTGGCAATGATA+GGG | 0.535730 | 2_2:-25610509 | None:intergenic |
| GATGCTCCTTCTGGTGCAGG+TGG | 0.545679 | 2_2:+25610558 | Msa0245730:CDS |
| TGGCTGTAAGATTAAGGAAG+TGG | 0.558727 | 2_2:+25610584 | Msa0245730:CDS |
| CCAGCACCACCTGCACCAGA+AGG | 0.570793 | 2_2:-25610564 | None:intergenic |
| ATGAGCAGAGAGATTTCTGA+AGG | 0.578789 | 2_2:+25606501 | Msa0245730:CDS |
| AACATATTGTATTTACACAT+AGG | 0.593531 | 2_2:-25606624 | None:intergenic |
| TGTTTATAAAGAAGGAAGTG+AGG | 0.599771 | 2_2:+25606386 | Msa0245730:CDS |
| CTACTTCTATGAAATTATTG+GGG | 0.603682 | 2_2:-25606440 | None:intergenic |
| AGGTGGTGCAGGTCCTGACA+TGG | 0.610696 | 2_2:+25610533 | Msa0245730:CDS |
| TGTCAGGACCTGCACCACCT+TGG | 0.615607 | 2_2:-25610530 | None:intergenic |
| ATTGGGGCATATGTTAAGAG+AGG | 0.617067 | 2_2:-25606424 | None:intergenic |
| ATCATTGCCAAGATGTACCA+AGG | 0.641899 | 2_2:+25610513 | Msa0245730:CDS |
| CACAACACAGAGCTATCTTG+GGG | 0.653722 | 2_2:-25606590 | None:intergenic |
| GCAAAGATGTAGGAACTGCG+AGG | 0.738757 | 2_2:+25610477 | Msa0245730:intron |
| ATGTGATTTAGCGTGCAAAG+GGG | 0.740275 | 2_2:+25606749 | Msa0245730:CDS |
| ATTGCCAAGATGTACCAAGG+TGG | 0.774020 | 2_2:+25610516 | Msa0245730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTCATATATTTTCTT+TGG | + | chr2_2:25608795-25608814 | Msa0245730:intron | 10.0% |
| !! | TGTTAAAATTTCTTATAATA+TGG | + | chr2_2:25609521-25609540 | Msa0245730:intron | 10.0% |
| !! | GTTAAAATTTCTTATAATAT+GGG | + | chr2_2:25609522-25609541 | Msa0245730:intron | 10.0% |
| !!! | AGTTTTGTAAAATTTTTCAT+TGG | + | chr2_2:25607125-25607144 | Msa0245730:intron | 15.0% |
| !!! | AAAATTTTTCATTGGAATTT+CGG | + | chr2_2:25607133-25607152 | Msa0245730:intron | 15.0% |
| !! | AAGTATAATAAGAATTTCTT+GGG | - | chr2_2:25607378-25607397 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTATACTTTCTA+TGG | + | chr2_2:25608832-25608851 | Msa0245730:intron | 15.0% |
| !! | AAAAAGAAAATAATCTCTTA+TGG | - | chr2_2:25609573-25609592 | None:intergenic | 15.0% |
| !! | ACTACTTCTATGAAATTATT+GGG | - | chr2_2:25606444-25606463 | None:intergenic | 20.0% |
| !! | AACTACTTCTATGAAATTAT+TGG | - | chr2_2:25606445-25606464 | None:intergenic | 20.0% |
| !!! | TTTCTTGATAATATTGATGT+TGG | + | chr2_2:25606474-25606493 | Msa0245730:CDS | 20.0% |
| !!! | TTCTTGATAATATTGATGTT+GGG | + | chr2_2:25606475-25606494 | Msa0245730:CDS | 20.0% |
| !! | AACATATTGTATTTACACAT+AGG | - | chr2_2:25606627-25606646 | None:intergenic | 20.0% |
| !! | TTTACAAAACTAAAAGTTGT+GGG | - | chr2_2:25607116-25607135 | None:intergenic | 20.0% |
| !!! | TTTTACAAAACTAAAAGTTG+TGG | - | chr2_2:25607117-25607136 | None:intergenic | 20.0% |
| !!! | AAATTTTTCATTGGAATTTC+GGG | + | chr2_2:25607134-25607153 | Msa0245730:intron | 20.0% |
| !! | TTAATCCATTGAAAAATAAC+TGG | + | chr2_2:25607248-25607267 | Msa0245730:intron | 20.0% |
| !!! | AAAATCCAGTTATTTTTCAA+TGG | - | chr2_2:25607256-25607275 | None:intergenic | 20.0% |
| !! | CAAGTATAATAAGAATTTCT+TGG | - | chr2_2:25607379-25607398 | None:intergenic | 20.0% |
| !!! | TATCTCTTTTTTTTGACAAA+AGG | - | chr2_2:25607485-25607504 | None:intergenic | 20.0% |
| !!! | ATTGAAATCATTTTTATGTG+TGG | - | chr2_2:25609342-25609361 | None:intergenic | 20.0% |
| !! | AATAAAAATGCATTCAAAGA+TGG | + | chr2_2:25609607-25609626 | Msa0245730:intron | 20.0% |
| !! | ATAAAAATGCATTCAAAGAT+GGG | + | chr2_2:25609608-25609627 | Msa0245730:intron | 20.0% |
| !! | AAATTTATTTGTTCTTCTTC+TGG | - | chr2_2:25609741-25609760 | None:intergenic | 20.0% |
| !!! | AGAACAAATAAATTTTCTGA+AGG | + | chr2_2:25609746-25609765 | Msa0245730:intron | 20.0% |
| !!! | AAAATTTGTTCATTCTTTGT+TGG | - | chr2_2:25610183-25610202 | None:intergenic | 20.0% |
| ! | CTACTTCTATGAAATTATTG+GGG | - | chr2_2:25606443-25606462 | None:intergenic | 25.0% |
| !!! | ATTTTGAAACCAAAAACGTA+AGG | - | chr2_2:25606565-25606584 | None:intergenic | 25.0% |
| ! | GTGTAAATACAATATGTTGT+TGG | + | chr2_2:25606629-25606648 | Msa0245730:CDS | 25.0% |
| ! | TTTGTTTGTGAATTGAGAAA+TGG | + | chr2_2:25607026-25607045 | Msa0245730:intron | 25.0% |
| !! | ATTTTCCTCTAACATTTGTA+GGG | - | chr2_2:25607161-25607180 | None:intergenic | 25.0% |
| !!! | TTCATTTTTAGTTCCTACAA+TGG | - | chr2_2:25607196-25607215 | None:intergenic | 25.0% |
| ! | ATCAACATCCAAAAATTTAG+AGG | + | chr2_2:25607541-25607560 | Msa0245730:intron | 25.0% |
| ! | TCAACATCCAAAAATTTAGA+GGG | + | chr2_2:25607542-25607561 | Msa0245730:intron | 25.0% |
| !!! | TGAGGATTTTAATAACAGAA+TGG | + | chr2_2:25608265-25608284 | Msa0245730:intron | 25.0% |
| ! | TTATTGCAGGATTTCTTTAA+CGG | + | chr2_2:25608620-25608639 | Msa0245730:intron | 25.0% |
| !! | TTCTTTTGTTGAGATTGTTT+TGG | + | chr2_2:25608765-25608784 | Msa0245730:intron | 25.0% |
| !!! | AGACTTTTTCAACTTTTTCA+TGG | - | chr2_2:25608936-25608955 | None:intergenic | 25.0% |
| ! | TGTTTGATTGTCAAAGAATT+AGG | - | chr2_2:25609308-25609327 | None:intergenic | 25.0% |
| ! | TGAAACATTTATTAAGCGTA+TGG | + | chr2_2:25609431-25609450 | Msa0245730:intron | 25.0% |
| ! | AACTAGGAATAACAATTTGT+TGG | + | chr2_2:25610266-25610285 | Msa0245730:intron | 25.0% |
| !! | ACTAGGAATAACAATTTGTT+GGG | + | chr2_2:25610267-25610286 | Msa0245730:intron | 25.0% |
| TGTTTATAAAGAAGGAAGTG+AGG | + | chr2_2:25606386-25606405 | Msa0245730:CDS | 30.0% | |
| ! | TTTCTGAAGGAAAAGGAAAT+TGG | + | chr2_2:25606514-25606533 | Msa0245730:CDS | 30.0% |
| ! | AAGAATCATCCTTACGTTTT+TGG | + | chr2_2:25606553-25606572 | Msa0245730:CDS | 30.0% |
| AAGTTAAGTGTTCTCATCAA+TGG | + | chr2_2:25606657-25606676 | Msa0245730:CDS | 30.0% | |
| ! | GATCATATTTAGAGCATGAA+TGG | + | chr2_2:25606775-25606794 | Msa0245730:CDS | 30.0% |
| !! | ATTATCCTTTTAGAGACACA+TGG | - | chr2_2:25606840-25606859 | None:intergenic | 30.0% |
| !!! | GTTGTGGGTTTTTTTTTGTA+TGG | - | chr2_2:25607101-25607120 | None:intergenic | 30.0% |
| ! | TTTTCCTCTAACATTTGTAG+GGG | - | chr2_2:25607160-25607179 | None:intergenic | 30.0% |
| ! | CATTTTCCTCTAACATTTGT+AGG | - | chr2_2:25607162-25607181 | None:intergenic | 30.0% |
| TGTTACAAAACTACCATTGT+AGG | + | chr2_2:25607180-25607199 | Msa0245730:intron | 30.0% | |
| TATTATACTTGTTTCGTCTC+AGG | + | chr2_2:25607388-25607407 | Msa0245730:intron | 30.0% | |
| ATTATACTTGTTTCGTCTCA+GGG | + | chr2_2:25607389-25607408 | Msa0245730:intron | 30.0% | |
| !!! | TTGAACAGTGTTAGTTTTCT+GGG | - | chr2_2:25607521-25607540 | None:intergenic | 30.0% |
| !!! | TTTGAACAGTGTTAGTTTTC+TGG | - | chr2_2:25607522-25607541 | None:intergenic | 30.0% |
| !!! | TGGCCTTTTAAGATTATTTC+TGG | + | chr2_2:25607819-25607838 | Msa0245730:intron | 30.0% |
| AGGCCAGAAATAATCTTAAA+AGG | - | chr2_2:25607825-25607844 | None:intergenic | 30.0% | |
| !!! | TTTTAAGATTATTTCTGGCC+TGG | + | chr2_2:25607824-25607843 | Msa0245730:intron | 30.0% |
| TTGTAGTTAACACCAATCAT+TGG | - | chr2_2:25607858-25607877 | None:intergenic | 30.0% | |
| !! | ATGATTGGTGTTAACTACAA+TGG | + | chr2_2:25607858-25607877 | Msa0245730:intron | 30.0% |
| GATAACAATGGCATTCTTAA+TGG | - | chr2_2:25607970-25607989 | None:intergenic | 30.0% | |
| TTTAACCTCATAAGATAGCT+GGG | - | chr2_2:25608216-25608235 | None:intergenic | 30.0% | |
| TATGAGGTTAAAGCTATATC+CGG | + | chr2_2:25608224-25608243 | Msa0245730:intron | 30.0% | |
| AGTAAATGATAGAGTTCTCT+TGG | - | chr2_2:25608387-25608406 | None:intergenic | 30.0% | |
| ATCAATTTCAATGGTGGTTT+GGG | - | chr2_2:25608411-25608430 | None:intergenic | 30.0% | |
| GAATAGACGATCAATTTCAA+TGG | - | chr2_2:25608420-25608439 | None:intergenic | 30.0% | |
| TGCAATAATTGTTGAACCTT+TGG | - | chr2_2:25608608-25608627 | None:intergenic | 30.0% | |
| AAAGGTTCAACAATTATTGC+AGG | + | chr2_2:25608607-25608626 | Msa0245730:intron | 30.0% | |
| TTTCATGGCATGTATATTAC+CGG | - | chr2_2:25608921-25608940 | None:intergenic | 30.0% | |
| ! | AATGTTTGTTCTTTTCCTCA+TGG | + | chr2_2:25609008-25609027 | Msa0245730:intron | 30.0% |
| AGAAATGCGATTAATATCAC+AGG | + | chr2_2:25609403-25609422 | Msa0245730:intron | 30.0% | |
| ACATTTATTAAGCGTATGGT+AGG | + | chr2_2:25609435-25609454 | Msa0245730:intron | 30.0% | |
| TTTCTTATAATATGGGACAG+AGG | + | chr2_2:25609529-25609548 | Msa0245730:intron | 30.0% | |
| !! | TTGCTTTTCTTTCCTTTTCA+CGG | + | chr2_2:25609658-25609677 | Msa0245730:intron | 30.0% |
| !!! | ACTTTGTTATTTTCAGGCTT+TGG | + | chr2_2:25609682-25609701 | Msa0245730:intron | 30.0% |
| !!! | CTTTGTTATTTTCAGGCTTT+GGG | + | chr2_2:25609683-25609702 | Msa0245730:intron | 30.0% |
| AATGAGTAGAAACCAATACT+CGG | - | chr2_2:25609790-25609809 | None:intergenic | 30.0% | |
| TCTCTCAAACATTTATCAAC+AGG | - | chr2_2:25609867-25609886 | None:intergenic | 30.0% | |
| ATGTTTGAGAGATGATAAGA+TGG | + | chr2_2:25609875-25609894 | Msa0245730:intron | 30.0% | |
| TTGTTCATTCTTTGTTGGAA+TGG | - | chr2_2:25610178-25610197 | None:intergenic | 30.0% | |
| ! | CAAATTGTTATTCCTAGTTC+TGG | - | chr2_2:25610265-25610284 | None:intergenic | 30.0% |
| TTGGGAAAATTTCAACTTTC+CGG | + | chr2_2:25610285-25610304 | Msa0245730:intron | 30.0% | |
| AATCATATTCACCAATGACA+AGG | + | chr2_2:25610413-25610432 | Msa0245730:intron | 30.0% | |
| ATCATATTCACCAATGACAA+GGG | + | chr2_2:25610414-25610433 | Msa0245730:intron | 30.0% | |
| AAAGGAAGTCATATAGAACA+TGG | + | chr2_2:25610446-25610465 | Msa0245730:intron | 30.0% | |
| ! | AGAGAGATTTCTGAAGGAAA+AGG | + | chr2_2:25606507-25606526 | Msa0245730:CDS | 35.0% |
| TATGTGATTTAGCGTGCAAA+GGG | + | chr2_2:25606748-25606767 | Msa0245730:CDS | 35.0% | |
| !! | TTTTAGAGACACATGGCATA+AGG | - | chr2_2:25606833-25606852 | None:intergenic | 35.0% |
| TTATGCCATGTGTCTCTAAA+AGG | + | chr2_2:25606832-25606851 | Msa0245730:intron | 35.0% | |
| TCACAACAAGAAATCCAAGT+TGG | + | chr2_2:25606877-25606896 | Msa0245730:intron | 35.0% | |
| AGCATCATAGGCATAAATGA+AGG | - | chr2_2:25606904-25606923 | None:intergenic | 35.0% | |
| ACCAACTTTGTTAGCATCAT+AGG | - | chr2_2:25606916-25606935 | None:intergenic | 35.0% | |
| ! | GGAGAAACATGGCATATTTT+TGG | + | chr2_2:25606979-25606998 | Msa0245730:intron | 35.0% |
| AAAGGAGAGAATGATCTGAA+AGG | - | chr2_2:25607467-25607486 | None:intergenic | 35.0% | |
| CAACTTCATATCACTCTGAA+CGG | - | chr2_2:25607799-25607818 | None:intergenic | 35.0% | |
| TTCAGAGTGATATGAAGTTG+TGG | + | chr2_2:25607799-25607818 | Msa0245730:intron | 35.0% | |
| GAGAATCATTAAAGTACGCA+GGG | - | chr2_2:25607998-25608017 | None:intergenic | 35.0% | |
| TGAGAATCATTAAAGTACGC+AGG | - | chr2_2:25607999-25608018 | None:intergenic | 35.0% | |
| GACATTCTTCTTTCCAATGT+CGG | - | chr2_2:25608129-25608148 | None:intergenic | 35.0% | |
| AATGTCTTGATCTTTGACCT+TGG | + | chr2_2:25608143-25608162 | Msa0245730:intron | 35.0% | |
| CTTTAACCTCATAAGATAGC+TGG | - | chr2_2:25608217-25608236 | None:intergenic | 35.0% | |
| TCTTGAACTCTTGAACAAAG+TGG | - | chr2_2:25608295-25608314 | None:intergenic | 35.0% | |
| GTTCAAGAGAAAGAACAAGA+AGG | + | chr2_2:25608307-25608326 | Msa0245730:intron | 35.0% | |
| AAGAACAAGAAGGACATTAG+TGG | + | chr2_2:25608317-25608336 | Msa0245730:intron | 35.0% | |
| TCAATCTCATAAGAGCTCTT+GGG | - | chr2_2:25608346-25608365 | None:intergenic | 35.0% | |
| GATCAATTTCAATGGTGGTT+TGG | - | chr2_2:25608412-25608431 | None:intergenic | 35.0% | |
| TAGACGATCAATTTCAATGG+TGG | - | chr2_2:25608417-25608436 | None:intergenic | 35.0% | |
| TGAAATTGATCGTCTATTCG+AGG | + | chr2_2:25608421-25608440 | Msa0245730:intron | 35.0% | |
| GAAATTGATCGTCTATTCGA+GGG | + | chr2_2:25608422-25608441 | Msa0245730:intron | 35.0% | |
| !! | CATGTTTAGCTCTTCAAATG+TGG | - | chr2_2:25608477-25608496 | None:intergenic | 35.0% |
| CACATTTGAAGAGCTAAACA+TGG | + | chr2_2:25608475-25608494 | Msa0245730:intron | 35.0% | |
| AGCTAAACATGGATCTCTTT+AGG | + | chr2_2:25608486-25608505 | Msa0245730:intron | 35.0% | |
| ! | GGATCTCTTTAGGAAATGTA+TGG | + | chr2_2:25608496-25608515 | Msa0245730:intron | 35.0% |
| ATGTTTGAGAGATGCTAAGA+TGG | + | chr2_2:25608532-25608551 | Msa0245730:intron | 35.0% | |
| !! | TTGTTGAACCTTTGGAATTC+TGG | - | chr2_2:25608600-25608619 | None:intergenic | 35.0% |
| CAAAAGAAGAAACTCCTACA+AGG | - | chr2_2:25608753-25608772 | None:intergenic | 35.0% | |
| CTGATACAAAGTGATTTCAC+AGG | + | chr2_2:25608871-25608890 | Msa0245730:intron | 35.0% | |
| ! | AAAAGTCTAAAATGCTCAGC+AGG | + | chr2_2:25608948-25608967 | Msa0245730:intron | 35.0% |
| ! | AAAGTCTAAAATGCTCAGCA+GGG | + | chr2_2:25608949-25608968 | Msa0245730:intron | 35.0% |
| ! | TTCCTCATGGTTCTATATTG+CGG | + | chr2_2:25609021-25609040 | Msa0245730:intron | 35.0% |
| !! | GGTGAACATTGATGATGAAA+GGG | - | chr2_2:25609218-25609237 | None:intergenic | 35.0% |
| ACATACATTACTAAGCAGCA+CGG | - | chr2_2:25609245-25609264 | None:intergenic | 35.0% | |
| ! | TGCTTTTCTTTCCTTTTCAC+GGG | + | chr2_2:25609659-25609678 | Msa0245730:intron | 35.0% |
| AATAACAAAGTCCCGTGAAA+AGG | - | chr2_2:25609673-25609692 | None:intergenic | 35.0% | |
| TTCATTCTTTGTTGGAATGG+TGG | - | chr2_2:25610175-25610194 | None:intergenic | 35.0% | |
| GTGTTTATCCAAGTCTTTGA+AGG | + | chr2_2:25610231-25610250 | Msa0245730:intron | 35.0% | |
| AATGTCAAAACAGTGATCTG+TGG | - | chr2_2:25610334-25610353 | None:intergenic | 35.0% | |
| !!! | TGTTTTGACATTGATGCTAG+TGG | + | chr2_2:25610342-25610361 | Msa0245730:intron | 35.0% |
| TTGCTGAAGACAAAACTACT+TGG | + | chr2_2:25610379-25610398 | Msa0245730:intron | 35.0% | |
| TGAAAGTTTACCCTTGTCAT+TGG | - | chr2_2:25610427-25610446 | None:intergenic | 35.0% | |
| TGACAAGGGTAAACTTTCAA+AGG | + | chr2_2:25610428-25610447 | Msa0245730:intron | 35.0% | |
| CATATAGAACATGGTTCAAG+AGG | + | chr2_2:25610455-25610474 | Msa0245730:intron | 35.0% | |
| ATTGGGGCATATGTTAAGAG+AGG | - | chr2_2:25606427-25606446 | None:intergenic | 40.0% | |
| ATGAGCAGAGAGATTTCTGA+AGG | + | chr2_2:25606501-25606520 | Msa0245730:CDS | 40.0% | |
| CTATGTGATTTAGCGTGCAA+AGG | + | chr2_2:25606747-25606766 | Msa0245730:CDS | 40.0% | |
| ATGTGATTTAGCGTGCAAAG+GGG | + | chr2_2:25606749-25606768 | Msa0245730:CDS | 40.0% | |
| ! | TCTTGTTGTGATCGTGTCAT+GGG | - | chr2_2:25606868-25606887 | None:intergenic | 40.0% |
| ! | TTCTTGTTGTGATCGTGTCA+TGG | - | chr2_2:25606869-25606888 | None:intergenic | 40.0% |
| GCATAAATGAAGGACCAACT+TGG | - | chr2_2:25606894-25606913 | None:intergenic | 40.0% | |
| GCCTATGATGCTAACAAAGT+TGG | + | chr2_2:25606912-25606931 | Msa0245730:intron | 40.0% | |
| CAAATTTCTGTCCGAGTCTA+TGG | + | chr2_2:25606938-25606957 | Msa0245730:intron | 40.0% | |
| ! | CGCAGATCCCTCTAAATTTT+TGG | - | chr2_2:25607552-25607571 | None:intergenic | 40.0% |
| AATTTAGAGGGATCTGCGAT+AGG | + | chr2_2:25607554-25607573 | Msa0245730:intron | 40.0% | |
| ATTTAGAGGGATCTGCGATA+GGG | + | chr2_2:25607555-25607574 | Msa0245730:intron | 40.0% | |
| TCGGTAAAGGTGACATAAGA+CGG | - | chr2_2:25607669-25607688 | None:intergenic | 40.0% | |
| ! | TTCGATGCTAAGAGGTTGAT+TGG | + | chr2_2:25607753-25607772 | Msa0245730:intron | 40.0% |
| TTCATATCACTCTGAACGGA+GGG | - | chr2_2:25607795-25607814 | None:intergenic | 40.0% | |
| !! | CAATCATTGGCTTATCATCC+AGG | - | chr2_2:25607845-25607864 | None:intergenic | 40.0% |
| CTGGATGATAAGCCAATGAT+TGG | + | chr2_2:25607843-25607862 | Msa0245730:intron | 40.0% | |
| ATGAAGACCAGCAATAACAC+TGG | - | chr2_2:25608042-25608061 | None:intergenic | 40.0% | |
| TAATGCCCAGCTATCTTATG+AGG | + | chr2_2:25608208-25608227 | Msa0245730:intron | 40.0% | |
| TAAAATCCTCACCTCCAAGA+TGG | - | chr2_2:25608256-25608275 | None:intergenic | 40.0% | |
| CTCAATCTCATAAGAGCTCT+TGG | - | chr2_2:25608347-25608366 | None:intergenic | 40.0% | |
| CAAGAGCTCTTATGAGATTG+AGG | + | chr2_2:25608345-25608364 | Msa0245730:intron | 40.0% | |
| TTCAAATGTGGCACGAGTAA+TGG | - | chr2_2:25608465-25608484 | None:intergenic | 40.0% | |
| AGGTTCTACCAGAATTCCAA+AGG | + | chr2_2:25608589-25608608 | Msa0245730:intron | 40.0% | |
| GCAGGATTTCTTTAACGGAA+AGG | + | chr2_2:25608625-25608644 | Msa0245730:intron | 40.0% | |
| GTTTACGCTGCATACTTGAA+TGG | + | chr2_2:25608698-25608717 | Msa0245730:intron | 40.0% | |
| TATTACCGGATTTCTTCTCG+CGG | - | chr2_2:25608907-25608926 | None:intergenic | 40.0% | |
| ! | AAGTCTAAAATGCTCAGCAG+GGG | + | chr2_2:25608950-25608969 | Msa0245730:intron | 40.0% |
| TTGATATCGCGGCAAAATGT+GGG | + | chr2_2:25609060-25609079 | Msa0245730:intron | 40.0% | |
| !! | GGGTGAACATTGATGATGAA+AGG | - | chr2_2:25609219-25609238 | None:intergenic | 40.0% |
| ATTACTAAGCAGCACGGTAT+GGG | - | chr2_2:25609239-25609258 | None:intergenic | 40.0% | |
| AATGCATTCAAAGATGGGAC+TGG | + | chr2_2:25609613-25609632 | Msa0245730:intron | 40.0% | |
| !!! | CACGGGACTTTGTTATTTTC+AGG | + | chr2_2:25609676-25609695 | Msa0245730:intron | 40.0% |
| TCTGAAGGATTTAGAGAGCA+AGG | + | chr2_2:25609761-25609780 | Msa0245730:intron | 40.0% | |
| CATGTTGAGCTCTTCAAATC+TGG | - | chr2_2:25609820-25609839 | None:intergenic | 40.0% | |
| CAGATTTGAAGAGCTCAACA+TGG | + | chr2_2:25609818-25609837 | Msa0245730:intron | 40.0% | |
| AGCTCAACATGGATCTCTTT+GGG | + | chr2_2:25609829-25609848 | Msa0245730:intron | 40.0% | |
| AGGTTCTACCAGAATTCCAA+AGG | + | chr2_2:25608589-25608608 | Msa0245730:intron | 40.0% | |
| !! | AGTTGTTGCCTTTGGAATTC+TGG | - | chr2_2:25609943-25609962 | None:intergenic | 40.0% |
| ! | GCAGGTTTTCTTTAACAGAG+AGG | + | chr2_2:25609966-25609985 | Msa0245730:intron | 40.0% |
| GTTGGAATGGTGGTATTCTT+GGG | - | chr2_2:25610165-25610184 | None:intergenic | 40.0% | |
| TGTTGGAATGGTGGTATTCT+TGG | - | chr2_2:25610166-25610185 | None:intergenic | 40.0% | |
| ! | ACCTATATTGATAACCAGCC+TGG | + | chr2_2:25610207-25610226 | Msa0245730:intron | 40.0% |
| ! | ACCAGGCTGGTTATCAATAT+AGG | - | chr2_2:25610211-25610230 | None:intergenic | 40.0% |
| AAGACTTGGATAAACACACC+AGG | - | chr2_2:25610228-25610247 | None:intergenic | 40.0% | |
| TTCTCTCTCCTTCAAAGACT+TGG | - | chr2_2:25610242-25610261 | None:intergenic | 40.0% | |
| TGAAGACAAAACTACTTGGC+AGG | + | chr2_2:25610383-25610402 | Msa0245730:intron | 40.0% | |
| GGTACATCTTGGCAATGATA+GGG | - | chr2_2:25610512-25610531 | None:intergenic | 40.0% | |
| TGGTACATCTTGGCAATGAT+AGG | - | chr2_2:25610513-25610532 | None:intergenic | 40.0% | |
| ATCATTGCCAAGATGTACCA+AGG | + | chr2_2:25610513-25610532 | Msa0245730:CDS | 40.0% | |
| TGGCTGTAAGATTAAGGAAG+TGG | + | chr2_2:25610584-25610603 | Msa0245730:CDS | 40.0% | |
| CACAACACAGAGCTATCTTG+GGG | - | chr2_2:25606593-25606612 | None:intergenic | 45.0% | |
| GCACAACACAGAGCTATCTT+GGG | - | chr2_2:25606594-25606613 | None:intergenic | 45.0% | |
| AGCACAACACAGAGCTATCT+TGG | - | chr2_2:25606595-25606614 | None:intergenic | 45.0% | |
| TTCTGTCCGAGTCTATGGAA+TGG | + | chr2_2:25606943-25606962 | Msa0245730:intron | 45.0% | |
| TCTGTCCGAGTCTATGGAAT+GGG | + | chr2_2:25606944-25606963 | Msa0245730:intron | 45.0% | |
| CTCTTCCCATTCCATAGACT+CGG | - | chr2_2:25606952-25606971 | None:intergenic | 45.0% | |
| TACACCTACGCATGAGTATG+TGG | - | chr2_2:25607594-25607613 | None:intergenic | 45.0% | |
| CATACTCATGCGTAGGTGTA+TGG | + | chr2_2:25607594-25607613 | Msa0245730:intron | 45.0% | |
| AAAGGTGACATAAGACGGTG+TGG | - | chr2_2:25607664-25607683 | None:intergenic | 45.0% | |
| CCTAGCGACTTGATTCTTAG+CGG | - | chr2_2:25607715-25607734 | None:intergenic | 45.0% | |
| !! | CATCGAAGACGGTGTTGATA+GGG | - | chr2_2:25607740-25607759 | None:intergenic | 45.0% |
| ! | CAACCTCTTAGCATCGAAGA+CGG | - | chr2_2:25607751-25607770 | None:intergenic | 45.0% |
| CTTCATATCACTCTGAACGG+AGG | - | chr2_2:25607796-25607815 | None:intergenic | 45.0% | |
| CATGGAAGAGATCTCTTCTG+CGG | - | chr2_2:25607901-25607920 | None:intergenic | 45.0% | |
| CATTCTTAATGGCAGAGCCA+AGG | - | chr2_2:25607959-25607978 | None:intergenic | 45.0% | |
| CGCAGGGATAGTGATAACAA+TGG | - | chr2_2:25607982-25608001 | None:intergenic | 45.0% | |
| ATTCTCAGAGACAAGCCACT+AGG | + | chr2_2:25608012-25608031 | Msa0245730:intron | 45.0% | |
| TTCTCAGAGACAAGCCACTA+GGG | + | chr2_2:25608013-25608032 | Msa0245730:intron | 45.0% | |
| AATAACACTGGCATCCCTAG+TGG | - | chr2_2:25608030-25608049 | None:intergenic | 45.0% | |
| CTTGCCAAGACCATAAGCAA+TGG | - | chr2_2:25608099-25608118 | None:intergenic | 45.0% | |
| ! | TGCTTATGGTCTTGGCAAGA+AGG | + | chr2_2:25608100-25608119 | Msa0245730:intron | 45.0% |
| GTCTTGATCTTTGACCTTGG+TGG | + | chr2_2:25608146-25608165 | Msa0245730:intron | 45.0% | |
| TTGATCTTTGACCTTGGTGG+TGG | + | chr2_2:25608149-25608168 | Msa0245730:intron | 45.0% | |
| !! | CATCAAAAGTACCACCACCA+AGG | - | chr2_2:25608163-25608182 | None:intergenic | 45.0% |
| ATTGAGGACTGCTTGTGAGA+AGG | + | chr2_2:25608361-25608380 | Msa0245730:intron | 45.0% | |
| AAATGTGGCACGAGTAATGG+AGG | - | chr2_2:25608462-25608481 | None:intergenic | 45.0% | |
| GTCCATCATGTTGTCCTTGT+AGG | + | chr2_2:25608566-25608585 | Msa0245730:intron | 45.0% | |
| CTCCTACAAGGACAACATGA+TGG | - | chr2_2:25608571-25608590 | None:intergenic | 45.0% | |
| CATCATGTTGTCCTTGTAGG+AGG | + | chr2_2:25608569-25608588 | Msa0245730:intron | 45.0% | |
| TTCTGGTAGAACCTCCTACA+AGG | - | chr2_2:25608583-25608602 | None:intergenic | 45.0% | |
| GTCCATGATGTTGTCCTTGT+AGG | + | chr2_2:25608736-25608755 | Msa0245730:intron | 45.0% | |
| CTCCTACAAGGACAACATCA+TGG | - | chr2_2:25608741-25608760 | None:intergenic | 45.0% | |
| GACCGCAATATAGAACCATG+AGG | - | chr2_2:25609026-25609045 | None:intergenic | 45.0% | |
| ATCTGCGAACCTTGATATCG+CGG | + | chr2_2:25609049-25609068 | Msa0245730:intron | 45.0% | |
| ! | CACATTTTGCCGCGATATCA+AGG | - | chr2_2:25609061-25609080 | None:intergenic | 45.0% |
| CTTGATATCGCGGCAAAATG+TGG | + | chr2_2:25609059-25609078 | Msa0245730:intron | 45.0% | |
| CATTACTAAGCAGCACGGTA+TGG | - | chr2_2:25609240-25609259 | None:intergenic | 45.0% | |
| GATGGGACTGGACATTTACT+TGG | + | chr2_2:25609625-25609644 | Msa0245730:intron | 45.0% | |
| GAGCTCAACATGGATCTCTT+TGG | + | chr2_2:25609828-25609847 | Msa0245730:intron | 45.0% | |
| TGTCCATGATGTTGTCCTTG+TGG | + | chr2_2:25608735-25608754 | Msa0245730:intron | 45.0% | |
| GTCCATGATGTTGTCCTTGT+GGG | + | chr2_2:25608736-25608755 | Msa0245730:intron | 45.0% | |
| CCTGCAATAGTTGTTGCCTT+TGG | - | chr2_2:25609951-25609970 | None:intergenic | 45.0% | |
| CCAAAGGCAACAACTATTGC+AGG | + | chr2_2:25609948-25609967 | Msa0245730:intron | 45.0% | |
| CAATAGCATTAATCCCGACG+AGG | + | chr2_2:25609996-25610015 | Msa0245730:intron | 45.0% | |
| TGCATATGGTACTGCTGTTC+AGG | + | chr2_2:25610023-25610042 | Msa0245730:intron | 45.0% | |
| ! | AGGATCCTCTCCTTTCCTTT+TGG | + | chr2_2:25610081-25610100 | Msa0245730:intron | 45.0% |
| GACATCCAAAAGGAAAGGAG+AGG | - | chr2_2:25610089-25610108 | None:intergenic | 45.0% | |
| AAGGAGAGAGAACCAGAACT+AGG | + | chr2_2:25610250-25610269 | Msa0245730:intron | 45.0% | |
| GGTTCAAGAGGCAAAGATGT+AGG | + | chr2_2:25610467-25610486 | Msa0245730:intron | 45.0% | |
| ATTGCCAAGATGTACCAAGG+TGG | + | chr2_2:25610516-25610535 | Msa0245730:CDS | 45.0% | |
| !! | TGGTGCTGGCTGTAAGATTA+AGG | + | chr2_2:25610578-25610597 | Msa0245730:CDS | 45.0% |
| !!! | AATTATTTTTAATATTTACA+GGG | - | chr2_2:25607069-25607088 | None:intergenic | 5.0% |
| !!! | AAATTATTTTTAATATTTAC+AGG | - | chr2_2:25607070-25607089 | None:intergenic | 5.0% |
| AGAGCAGCACAGGAGAAACA+TGG | + | chr2_2:25606968-25606987 | Msa0245730:intron | 50.0% | |
| TTTCTTCAGTGCGTGTCGCA+AGG | + | chr2_2:25607003-25607022 | Msa0245730:intron | 50.0% | |
| TCTGCGATAGGGATCGATCT+CGG | + | chr2_2:25607566-25607585 | Msa0245730:intron | 50.0% | |
| GGAACCACATACTCATGCGT+AGG | + | chr2_2:25607587-25607606 | Msa0245730:intron | 50.0% | |
| GAAATCATCGCCAACGACCA+AGG | + | chr2_2:25607630-25607649 | Msa0245730:intron | 50.0% | |
| GGTTCTGTTACCTTGGTCGT+TGG | - | chr2_2:25607643-25607662 | None:intergenic | 50.0% | |
| ! | ACGGTGTGGTTCTGTTACCT+TGG | - | chr2_2:25607650-25607669 | None:intergenic | 50.0% |
| GAGATGCTCGGAATCGGTAA+AGG | - | chr2_2:25607682-25607701 | None:intergenic | 50.0% | |
| ! | ACCGATTCCGAGCATCTCAT+CGG | + | chr2_2:25607684-25607703 | Msa0245730:intron | 50.0% |
| ACCGATGAGATGCTCGGAAT+CGG | - | chr2_2:25607688-25607707 | None:intergenic | 50.0% | |
| CCGCTAAGAATCAAGTCGCT+AGG | + | chr2_2:25607712-25607731 | Msa0245730:intron | 50.0% | |
| !! | GCATCGAAGACGGTGTTGAT+AGG | - | chr2_2:25607741-25607760 | None:intergenic | 50.0% |
| ACACCGTCTTCGATGCTAAG+AGG | + | chr2_2:25607745-25607764 | Msa0245730:intron | 50.0% | |
| CGGAGGGATCACTGAATCTA+CGG | - | chr2_2:25607779-25607798 | None:intergenic | 50.0% | |
| CGCAGAAGAGATCTCTTCCA+TGG | + | chr2_2:25607899-25607918 | Msa0245730:intron | 50.0% | |
| ACGCATCTTCGTGAGTACCA+TGG | - | chr2_2:25607919-25607938 | None:intergenic | 50.0% | |
| CTTAATGGCAGAGCCAAGGT+AGG | - | chr2_2:25607955-25607974 | None:intergenic | 50.0% | |
| ! | AGGGATGCCAGTGTTATTGC+TGG | + | chr2_2:25608032-25608051 | Msa0245730:intron | 50.0% |
| TAAGCAATGGCTGCAGCAGT+GGG | - | chr2_2:25608086-25608105 | None:intergenic | 50.0% | |
| ATAAGCAATGGCTGCAGCAG+TGG | - | chr2_2:25608087-25608106 | None:intergenic | 50.0% | |
| ACTGCTGCAGCCATTGCTTA+TGG | + | chr2_2:25608086-25608105 | Msa0245730:intron | 50.0% | |
| GCAGCCATTGCTTATGGTCT+TGG | + | chr2_2:25608092-25608111 | Msa0245730:intron | 50.0% | |
| GGCAAGAAGGTAACCGACAT+TGG | + | chr2_2:25608113-25608132 | Msa0245730:intron | 50.0% | |
| ATATCCGGAGACAGCCATCT+TGG | + | chr2_2:25608239-25608258 | Msa0245730:intron | 50.0% | |
| ACCATATGCAACAGCCTCGT+CGG | - | chr2_2:25608672-25608691 | None:intergenic | 50.0% | |
| CTTTGCCGCGAGAAGAAATC+CGG | + | chr2_2:25608899-25608918 | Msa0245730:intron | 50.0% | |
| TAAAATGCTCAGCAGGGGAC+AGG | + | chr2_2:25608955-25608974 | Msa0245730:intron | 50.0% | |
| CACCAGACAAGTGAGAACAG+GGG | - | chr2_2:25609121-25609140 | None:intergenic | 50.0% | |
| GCACCAGACAAGTGAGAACA+GGG | - | chr2_2:25609122-25609141 | None:intergenic | 50.0% | |
| AGCACCAGACAAGTGAGAAC+AGG | - | chr2_2:25609123-25609142 | None:intergenic | 50.0% | |
| !! | CAGGCTTTGGGTGTTAGAGA+AGG | + | chr2_2:25609695-25609714 | Msa0245730:intron | 50.0% |
| AGAGCAAGGAGACCGAGTAT+TGG | + | chr2_2:25609775-25609794 | Msa0245730:intron | 50.0% | |
| CTCCCACAAGGACAACATCA+TGG | - | chr2_2:25609914-25609933 | None:intergenic | 50.0% | |
| CATGATGTTGTCCTTGTGGG+AGG | + | chr2_2:25609912-25609931 | Msa0245730:intron | 50.0% | |
| TTCTGGTAGAACCTCCCACA+AGG | - | chr2_2:25609926-25609945 | None:intergenic | 50.0% | |
| ACCATATGCAACAGCCTCGT+CGG | - | chr2_2:25608672-25608691 | None:intergenic | 50.0% | |
| GTTCAGGCTGCAATCTCAAG+TGG | + | chr2_2:25610039-25610058 | Msa0245730:intron | 50.0% | |
| GCTGCAATCTCAAGTGGTGA+GGG | + | chr2_2:25610045-25610064 | Msa0245730:intron | 50.0% | |
| CAAGTGGTGAGGGCAATAGA+AGG | + | chr2_2:25610055-25610074 | Msa0245730:intron | 50.0% | |
| GTGAGGGCAATAGAAGGTTC+AGG | + | chr2_2:25610061-25610080 | Msa0245730:intron | 50.0% | |
| GGGGTGACATCCAAAAGGAA+AGG | - | chr2_2:25610094-25610113 | None:intergenic | 50.0% | |
| CTTGGATAAACACACCAGGC+TGG | - | chr2_2:25610224-25610243 | None:intergenic | 50.0% | |
| GCAAAGATGTAGGAACTGCG+AGG | + | chr2_2:25610477-25610496 | Msa0245730:intron | 50.0% | |
| TGCACCACCTTGGTACATCT+TGG | - | chr2_2:25610523-25610542 | None:intergenic | 50.0% | |
| AAGATGTACCAAGGTGGTGC+AGG | + | chr2_2:25610522-25610541 | Msa0245730:CDS | 50.0% | |
| !! | GAAGGAGCATCATCCATGTC+AGG | - | chr2_2:25610549-25610568 | None:intergenic | 50.0% |
| GACATGGATGATGCTCCTTC+TGG | + | chr2_2:25610549-25610568 | Msa0245730:CDS | 50.0% | |
| TGGAATGGGAAGAGCAGCAC+AGG | + | chr2_2:25606958-25606977 | Msa0245730:intron | 55.0% | |
| CGGGCCCCTACAAATGTTAG+AGG | + | chr2_2:25607153-25607172 | Msa0245730:intron | 55.0% | |
| GGCATCACCGATGAGATGCT+CGG | - | chr2_2:25607694-25607713 | None:intergenic | 55.0% | |
| GGTACTCACGAAGATGCGTG+AGG | + | chr2_2:25607920-25607939 | Msa0245730:intron | 55.0% | |
| GAAGATGCGTGAGGTTGCTG+AGG | + | chr2_2:25607929-25607948 | Msa0245730:intron | 55.0% | |
| ACCTCCAAGATGGCTGTCTC+CGG | - | chr2_2:25608246-25608265 | None:intergenic | 55.0% | |
| AGACAGCCATCTTGGAGGTG+AGG | + | chr2_2:25608247-25608266 | Msa0245730:intron | 55.0% | |
| CAATCGCATCAATCCCGACG+AGG | + | chr2_2:25608655-25608674 | Msa0245730:intron | 55.0% | |
| CCATATGCAACAGCCTCGTC+GGG | - | chr2_2:25608671-25608690 | None:intergenic | 55.0% | |
| GTCCCCTGTTCTCACTTGTC+TGG | + | chr2_2:25609116-25609135 | Msa0245730:intron | 55.0% | |
| CCATATGCAACAGCCTCGTC+GGG | - | chr2_2:25608671-25608690 | None:intergenic | 55.0% | |
| GGCTGCAATCTCAAGTGGTG+AGG | + | chr2_2:25610044-25610063 | Msa0245730:intron | 55.0% | |
| ! | ATGGCGGGGTGACATCCAAA+AGG | - | chr2_2:25610099-25610118 | None:intergenic | 55.0% |
| TCTCCAGACCAAGAGATGGC+GGG | - | chr2_2:25610114-25610133 | None:intergenic | 55.0% | |
| GTCTCCAGACCAAGAGATGG+CGG | - | chr2_2:25610115-25610134 | None:intergenic | 55.0% | |
| GCAGTCTCCAGACCAAGAGA+TGG | - | chr2_2:25610118-25610137 | None:intergenic | 55.0% | |
| TCTCTTGGTCTGGAGACTGC+TGG | + | chr2_2:25610118-25610137 | Msa0245730:intron | 55.0% | |
| GTGATCTGTGGAACACCCCT+AGG | - | chr2_2:25610322-25610341 | None:intergenic | 55.0% | |
| GATGATGCTCCTTCTGGTGC+AGG | + | chr2_2:25610555-25610574 | Msa0245730:CDS | 55.0% | |
| GAGGTTGCTGAGGCCTACCT+TGG | + | chr2_2:25607939-25607958 | Msa0245730:intron | 60.0% | |
| ! | CAGCAGTGGGCTCAGGGATA+AGG | - | chr2_2:25608073-25608092 | None:intergenic | 60.0% |
| TCCGGAGACAGCCATCTTGG+AGG | + | chr2_2:25608242-25608261 | Msa0245730:intron | 60.0% | |
| CCCGACGAGGCTGTTGCATA+TGG | + | chr2_2:25608668-25608687 | Msa0245730:intron | 60.0% | |
| CCCGACGAGGCTGTTGCATA+TGG | + | chr2_2:25608668-25608687 | Msa0245730:intron | 60.0% | |
| GATGTCACCCCGCCATCTCT+TGG | + | chr2_2:25610103-25610122 | Msa0245730:intron | 60.0% | |
| CTCCAGACCAAGAGATGGCG+GGG | - | chr2_2:25610113-25610132 | None:intergenic | 60.0% | |
| CTTGGTCTGGAGACTGCTGG+TGG | + | chr2_2:25610121-25610140 | Msa0245730:intron | 60.0% | |
| TTCCGGCATCTCCTGCTCCT+AGG | + | chr2_2:25610302-25610321 | Msa0245730:intron | 60.0% | |
| TCCGGCATCTCCTGCTCCTA+GGG | + | chr2_2:25610303-25610322 | Msa0245730:intron | 60.0% | |
| TGTGGAACACCCCTAGGAGC+AGG | - | chr2_2:25610316-25610335 | None:intergenic | 60.0% | |
| TGTCAGGACCTGCACCACCT+TGG | - | chr2_2:25610533-25610552 | None:intergenic | 60.0% | |
| AGGTGGTGCAGGTCCTGACA+TGG | + | chr2_2:25610533-25610552 | Msa0245730:CDS | 60.0% | |
| GATGCTCCTTCTGGTGCAGG+TGG | + | chr2_2:25610558-25610577 | Msa0245730:CDS | 60.0% | |
| ! | TGGCTGCAGCAGTGGGCTCA+GGG | - | chr2_2:25608079-25608098 | None:intergenic | 65.0% |
| ! | ATGGCTGCAGCAGTGGGCTC+AGG | - | chr2_2:25608080-25608099 | None:intergenic | 65.0% |
| TGCTCAGCAGGGGACAGGTG+AGG | + | chr2_2:25608960-25608979 | Msa0245730:intron | 65.0% | |
| CACCCCGCCATCTCTTGGTC+TGG | + | chr2_2:25610108-25610127 | Msa0245730:intron | 65.0% | |
| CCCCTAGGAGCAGGAGATGC+CGG | - | chr2_2:25610307-25610326 | None:intergenic | 65.0% | |
| CCGGCATCTCCTGCTCCTAG+GGG | + | chr2_2:25610304-25610323 | Msa0245730:intron | 65.0% | |
| CCAGCACCACCTGCACCAGA+AGG | - | chr2_2:25610567-25610586 | None:intergenic | 65.0% | |
| CCTTCTGGTGCAGGTGGTGC+TGG | + | chr2_2:25610564-25610583 | Msa0245730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 25606381 | 25610617 | 25606381 | ID=Msa0245730;Name=Msa0245730 |
| chr2_2 | mRNA | 25606381 | 25610617 | 25606381 | ID=Msa0245730-mRNA-1;Parent=Msa0245730;Name=Msa0245730-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|2|0|183 |
| chr2_2 | exon | 25606381 | 25606803 | 25606381 | ID=Msa0245730-mRNA-1:exon:9650;Parent=Msa0245730-mRNA-1 |
| chr2_2 | exon | 25610489 | 25610617 | 25610489 | ID=Msa0245730-mRNA-1:exon:9651;Parent=Msa0245730-mRNA-1 |
| chr2_2 | CDS | 25606381 | 25606803 | 25606381 | ID=Msa0245730-mRNA-1:cds;Parent=Msa0245730-mRNA-1 |
| chr2_2 | CDS | 25610489 | 25610617 | 25610489 | ID=Msa0245730-mRNA-1:cds;Parent=Msa0245730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
