AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0248800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248800 MtrunA17_Chr2g0304041 94.798 865 33 3 74 926 1 865 0.0 1585
Msa0248800 MtrunA17_Chr3g0096561 61.410 837 280 14 84 898 16 831 0.0 923
Msa0248800 MtrunA17_Chr8g0385721 40.479 835 379 26 116 881 137 922 1.39e-142 448
Msa0248800 MtrunA17_Chr3g0131631 39.563 824 349 31 139 881 159 914 8.29e-142 446
Msa0248800 MtrunA17_Chr7g0221461 43.711 318 155 6 130 445 79 374 7.60e-70 248
Msa0248800 MtrunA17_Chr7g0221461 63.694 157 45 3 738 883 628 783 2.12e-50 191
Msa0248800 MtrunA17_Chr7g0276301 37.757 437 180 11 118 554 2 346 6.34e-68 237
Msa0248800 MtrunA17_Chr5g0423961 80.531 113 22 0 309 421 1 113 7.97e-55 185
Msa0248800 MtrunA17_Chr5g0428671 81.416 113 21 0 309 421 1 113 1.71e-53 181
Msa0248800 MtrunA17_Chr7g0276291 76.087 92 21 1 792 882 4 95 3.69e-41 148
Msa0248800 MtrunA17_Chr3g0123391 36.538 208 98 9 720 902 288 486 1.63e-23 105
Msa0248800 MtrunA17_Chr3g0123391 37.356 174 75 5 282 427 59 226 2.22e-23 105
Msa0248800 MtrunA17_Chr4g0033701 29.885 174 113 4 267 440 25 189 1.77e-13 75.1
Msa0248800 MtrunA17_Chr4g0074711 26.178 191 118 5 258 426 156 345 9.21e-13 71.2
Msa0248800 MtrunA17_Chr2g0288251 25.967 181 112 5 267 426 153 332 1.45e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248800 AT1G29400.1 56.273 821 292 23 112 912 23 796 0.0 799
Msa0248800 AT1G29400.2 56.273 821 292 23 112 912 23 796 0.0 799
Msa0248800 AT1G29400.3 56.273 821 292 23 112 912 23 796 0.0 799
Msa0248800 AT2G42890.1 45.161 806 378 18 103 882 35 802 0.0 565
Msa0248800 AT2G42890.3 45.161 806 378 18 103 882 22 789 0.0 565
Msa0248800 AT2G42890.2 45.161 806 378 18 103 882 22 789 0.0 565
Msa0248800 AT5G61960.3 39.532 769 386 22 170 893 139 873 5.13e-126 404
Msa0248800 AT5G61960.1 39.532 769 386 22 170 893 139 873 5.13e-126 404
Msa0248800 AT5G61960.10 39.532 769 386 22 170 893 139 873 5.13e-126 404
Msa0248800 AT5G61960.2 39.532 769 386 22 170 893 139 873 5.13e-126 404
Msa0248800 AT5G61960.7 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G61960.4 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G61960.8 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G61960.11 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G61960.6 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G61960.9 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G61960.5 39.532 769 386 22 170 893 132 866 5.30e-126 403
Msa0248800 AT5G07290.1 44.615 260 123 4 170 429 132 370 2.10e-55 207
Msa0248800 AT5G07290.1 47.482 278 117 12 636 893 603 871 1.55e-52 199
Msa0248800 AT3G26120.1 36.364 187 97 1 267 431 104 290 2.88e-32 134
Msa0248800 AT3G26120.1 37.748 151 61 3 766 883 402 552 4.98e-21 99.0
Msa0248800 AT1G67770.1 32.979 188 108 1 267 436 78 265 4.06e-28 120
Msa0248800 AT1G67770.1 36.986 146 62 7 757 872 320 465 2.49e-15 80.5
Msa0248800 AT5G54900.1 27.461 193 117 5 256 426 140 331 2.30e-12 70.5

Find 223 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAATCGTTCATACTTATT+TGG 0.059545 2_2:+33524736 None:intergenic
CGTTCATCAAACTTGAATTT+TGG 0.116811 2_2:+33523983 None:intergenic
GAAGACCTCCGCCAAATATT+TGG 0.140167 2_2:-33526633 Msa0248800:CDS
GAGTAGTTAGTTTGAGGTTC+AGG 0.166341 2_2:-33523203 Msa0248800:three_prime_UTR
GGTTGTTGGGCTCATTATTT+TGG 0.173697 2_2:+33525614 None:intergenic
CCACGATATGAACTAAATTT+TGG 0.174471 2_2:+33525423 None:intergenic
CGCCAAATATTTGGGGCTTA+TGG 0.189059 2_2:-33526624 Msa0248800:CDS
ATGCTTAATAGTGGCATTTC+TGG 0.196189 2_2:-33525030 Msa0248800:CDS
GTGGGAGGCGGAGCTGTTGC+TGG 0.220296 2_2:-33527237 Msa0248800:CDS
CTCCATAAGCCCCAAATATT+TGG 0.220471 2_2:+33526622 None:intergenic
TCTTCTCATACAAGGTTAAT+TGG 0.223308 2_2:+33523424 None:intergenic
TGACCGCTCCACAGTTTCTA+TGG 0.234954 2_2:-33525347 Msa0248800:CDS
GGTTTAACATCTGATGAATT+TGG 0.247954 2_2:-33528432 Msa0248800:CDS
ACACCATTAGGTAAAGAATA+AGG 0.261074 2_2:+33527258 None:intergenic
AACTTAAATGAAACTGAAAA+TGG 0.278401 2_2:-33527594 Msa0248800:CDS
CCATTGTCAGGCATATTTCT+TGG 0.278917 2_2:+33524988 None:intergenic
GCCAGCAAGCTTCAAAAGTT+TGG 0.283525 2_2:-33523352 Msa0248800:three_prime_UTR
GCCTGGTTCCCTTGAGGACT+TGG 0.288096 2_2:-33527403 Msa0248800:CDS
GTCATAGGTATGTGAATAAT+TGG 0.295295 2_2:+33528554 None:intergenic
TGATGATGACGAAGAGCTTT+TGG 0.301943 2_2:-33527460 Msa0248800:CDS
CATGTCGGTTCTGCTCCTTC+AGG 0.305218 2_2:-33525162 Msa0248800:CDS
AAGACTTTCTGATACATTAG+AGG 0.307583 2_2:+33523112 None:intergenic
AAGACCTCCGCCAAATATTT+GGG 0.315396 2_2:-33526632 Msa0248800:CDS
TTGGCATCCAAACTCATAAA+AGG 0.321386 2_2:+33523443 None:intergenic
GTTGGCTCTGAGGATAAGTT+TGG 0.323282 2_2:+33525318 None:intergenic
CAGCACTTAAATCATTAAAT+AGG 0.323423 2_2:-33526392 Msa0248800:CDS
TTGAAGCTAATCCCGGTAAA+TGG 0.327238 2_2:+33525586 None:intergenic
TTCAAAAGTTTGGTGCATTT+CGG 0.336040 2_2:-33523342 Msa0248800:three_prime_UTR
ATAATCGTTCATACTTATTT+GGG 0.341516 2_2:+33524737 None:intergenic
TGTGTTTACATGCAGTATAT+AGG 0.346668 2_2:+33526941 None:intergenic
GTGTTTACATGCAGTATATA+GGG 0.346693 2_2:+33526942 None:intergenic
AACAACCAGCAACCATTTAC+CGG 0.366832 2_2:-33525598 Msa0248800:CDS
CACCATTAGGTAAAGAATAA+GGG 0.375363 2_2:+33527259 None:intergenic
CGTGGAGCTTTGTCCTCGTT+TGG 0.379349 2_2:-33525405 Msa0248800:CDS
AGTAGTTAGTTTGAGGTTCA+GGG 0.384460 2_2:-33523202 Msa0248800:three_prime_UTR
TTTGGTGCATCAACCTCAAA+TGG 0.391564 2_2:-33525387 Msa0248800:CDS
GGTAAATGGTTGCTGGTTGT+TGG 0.394322 2_2:+33525600 None:intergenic
CTCCAACAATATGTATATTC+AGG 0.394698 2_2:-33523525 Msa0248800:CDS
ATGAATAATGTTGGCTATAG+AGG 0.396394 2_2:-33525084 Msa0248800:CDS
TTTAGAGAGTAGTTAGTTTG+AGG 0.398427 2_2:-33523209 Msa0248800:three_prime_UTR
AGCTCGACTTAGATAAGATT+AGG 0.403572 2_2:-33524801 Msa0248800:CDS
TTACGAGGGCATTCTTCCCT+TGG 0.405207 2_2:+33524013 None:intergenic
CCTCTAGCCGGTTCTCCGCC+AGG 0.407974 2_2:-33525846 Msa0248800:intron
GCTCCGCCTCCCACACCATT+AGG 0.408463 2_2:+33527246 None:intergenic
CTGACCGTGTTAGGAGTAGA+TGG 0.410461 2_2:-33524867 Msa0248800:CDS
GTCAATGAACTCTGCTCAAT+AGG 0.410542 2_2:+33525660 None:intergenic
ATGTGAATAATTGGTGTTCC+AGG 0.411689 2_2:+33528563 None:intergenic
AATATACATATTGTTGGAGT+TGG 0.413694 2_2:+33523529 None:intergenic
CTCATAAAAGGACCATCCTT+TGG 0.414491 2_2:+33523455 None:intergenic
CAATGAAGTTTCAGATGACT+TGG 0.417748 2_2:+33525107 None:intergenic
TGGTTCTGAAGCTGCTGATC+AGG 0.418008 2_2:-33523923 Msa0248800:intron
GGCTATAGAGGCATGGGTCT+AGG 0.420604 2_2:-33525072 Msa0248800:CDS
ACAGTGAAGGCCGCAACTAT+TGG 0.421095 2_2:-33525540 Msa0248800:CDS
GAACCAACCTGGCGGAGAAC+CGG 0.423130 2_2:+33525839 None:intergenic
GGTCAAGCTCTTGATTCAGT+TGG 0.423960 2_2:+33525907 None:intergenic
GTAAATGGTTGCTGGTTGTT+GGG 0.425050 2_2:+33525601 None:intergenic
TGCCTGAATATACATATTGT+TGG 0.425212 2_2:+33523523 None:intergenic
TGGGAGGCGGAGCTGTTGCT+GGG 0.428318 2_2:-33527236 Msa0248800:CDS
GACCAAGCTGAAGGTTTGGT+TGG 0.428996 2_2:+33525300 None:intergenic
CCTTGACCAAGCTGAAGGTT+TGG 0.429115 2_2:+33525296 None:intergenic
TGATTGATATCTTTGTCTGA+TGG 0.433902 2_2:+33526699 None:intergenic
TTAGGTAATGGTCCTTATCC+AGG 0.439673 2_2:-33524919 Msa0248800:CDS
TAATCCCGGTAAATGGTTGC+TGG 0.441185 2_2:+33525593 None:intergenic
TGTGTTTATAGGTGGAATCT+TGG 0.443828 2_2:+33527821 None:intergenic
CATCAACTTAGTACATCAAA+TGG 0.443912 2_2:-33525261 Msa0248800:CDS
AGCAATATTATCACAGTCAT+AGG 0.446523 2_2:+33528539 None:intergenic
GGAAATTACATGCTTAATAG+TGG 0.451447 2_2:-33525039 Msa0248800:CDS
GGTGCGTTGGAAGTTTCATC+TGG 0.452857 2_2:-33527780 Msa0248800:CDS
AATTGTTCTTAACCATTGCC+TGG 0.453493 2_2:-33528581 Msa0248800:CDS
CCATCTGAGTGGAAGACAAT+AGG 0.454748 2_2:+33523943 None:intergenic
AAAATAAACCTTTGCGGCGA+AGG 0.455847 2_2:-33526855 Msa0248800:CDS
CGAGCTCCTCCAGGCCGACT+TGG 0.456319 2_2:+33526336 None:intergenic
TTTGACTTAAGCGGTTTGCC+TGG 0.457426 2_2:-33527420 Msa0248800:CDS
GACTACTCCTTCCTATGTCC+TGG 0.458892 2_2:+33525517 None:intergenic
ATAGCTTCTTGTTGTCAACT+TGG 0.466998 2_2:+33524827 None:intergenic
AAGTTTGATGAACCATTGTC+AGG 0.471153 2_2:+33524976 None:intergenic
TTACCTAATGGTGTGGGAGG+CGG 0.474742 2_2:-33527249 Msa0248800:CDS
AAAAGCTCTTCGTCATCATC+AGG 0.476863 2_2:+33527462 None:intergenic
GACCGCTCCACAGTTTCTAT+GGG 0.479354 2_2:-33525346 Msa0248800:CDS
TCCAAGTCCTCAAGGGAACC+AGG 0.481268 2_2:+33527402 None:intergenic
ATACATATTGTTGGAGTTGG+AGG 0.481683 2_2:+33523532 None:intergenic
AGGTCTTCATTTGAAACTGA+TGG 0.483214 2_2:+33526648 None:intergenic
TCTGGCTACTTTCCAAAGGA+TGG 0.483392 2_2:-33523467 Msa0248800:CDS
CTCATACAAACCTCGTAGAA+TGG 0.484056 2_2:+33524260 None:intergenic
AGCTTGGTCAAGGCCATCTG+TGG 0.486302 2_2:-33525286 Msa0248800:CDS
CGAGAAGGATGCTCTCCATA+TGG 0.489991 2_2:+33527207 None:intergenic
TAAGTATAGAAGATCTCATT+CGG 0.490458 2_2:+33524953 None:intergenic
TGCAAAATTGAAGCTAATCC+CGG 0.501056 2_2:+33525579 None:intergenic
AAACCGAAGTGCCTTTCAAA+AGG 0.501561 2_2:+33525135 None:intergenic
GTAGGTAGTAGTCCTGGATA+AGG 0.503433 2_2:+33524907 None:intergenic
TTCCACTGACGACCCATTTG+AGG 0.503882 2_2:+33525374 None:intergenic
TTGGCGTATGCTCGAATCCA+AGG 0.504323 2_2:-33524030 Msa0248800:CDS
GATGGTAATAATCACACAAA+CGG 0.504390 2_2:-33527495 Msa0248800:CDS
ACAAATATAAATCATTCTCC+TGG 0.504505 2_2:-33525639 Msa0248800:CDS
TATTCTTTACCTAATGGTGT+GGG 0.504565 2_2:-33527255 Msa0248800:CDS
AAGCTTGAACCAAGTCGGCC+TGG 0.505150 2_2:-33526345 Msa0248800:CDS
TTATTCTTTACCTAATGGTG+TGG 0.505664 2_2:-33527256 Msa0248800:CDS
CATTGCAAAATAAACCTTTG+CGG 0.507495 2_2:-33526861 Msa0248800:CDS
ATTATGACATCCGCGCTGCT+CGG 0.512322 2_2:-33526897 Msa0248800:CDS
ACTTCTCCCACTTCTTCCCA+TGG 0.512338 2_2:+33524076 None:intergenic
GCAACTATTGGCCAGGACAT+AGG 0.512697 2_2:-33525528 Msa0248800:CDS
TACATATTGTTGGAGTTGGA+GGG 0.514427 2_2:+33523533 None:intergenic
GCTATAGAGGCATGGGTCTA+GGG 0.516065 2_2:-33525071 Msa0248800:CDS
GAATTGTTCTGACTTGAGTA+CGG 0.516495 2_2:+33525222 None:intergenic
GACATAGGAAGGAGTAGTCA+TGG 0.517179 2_2:-33525513 Msa0248800:CDS
AATTGTTCTGACTTGAGTAC+GGG 0.520148 2_2:+33525223 None:intergenic
TTTCCAGCTGTGTTTATAGG+TGG 0.521494 2_2:+33527813 None:intergenic
ATAATTGGTGTTCCAGGCAA+TGG 0.527307 2_2:+33528569 None:intergenic
AGTGGCATTTCTGGTAATGT+TGG 0.527380 2_2:-33525021 Msa0248800:CDS
GAAGGCCGCAACTATTGGCC+AGG 0.527459 2_2:-33525535 Msa0248800:CDS
AATGAAGTTTCAGATGACTT+GGG 0.527669 2_2:+33525108 None:intergenic
TAGAAACTGTGGAGCGGTCA+AGG 0.528238 2_2:+33525350 None:intergenic
CACTTGCGACGAGCTCCTCC+AGG 0.529174 2_2:+33526327 None:intergenic
ATTCCACCTATAAACACAGC+TGG 0.529401 2_2:-33527816 Msa0248800:CDS
TCAGACAAAGATATCAATCA+AGG 0.529552 2_2:-33526696 Msa0248800:CDS
GAAAACTTCGAGACTCATCT+TGG 0.529593 2_2:+33525886 None:intergenic
TTACAATTAAGCGATTCCTC+TGG 0.532232 2_2:-33523485 Msa0248800:CDS
TAAACACAGCTGGAAAATCA+AGG 0.533918 2_2:-33527806 Msa0248800:CDS
CCTATTGTCTTCCACTCAGA+TGG 0.534767 2_2:-33523943 Msa0248800:CDS
GTAATTTGAATGTCAATATG+TGG 0.536753 2_2:-33523232 Msa0248800:three_prime_UTR
TGGAGGTTTGGAACTAGAAA+CGG 0.538596 2_2:-33527355 Msa0248800:CDS
CATACTCTTCCAAGTCCTCA+AGG 0.540296 2_2:+33527394 None:intergenic
GTTGCTGGGGAACATCCATA+TGG 0.543396 2_2:-33527222 Msa0248800:CDS
CTTTGCAGTGAAATGTTATG+TGG 0.546878 2_2:+33528489 None:intergenic
AATGTTGGCTATAGAGGCAT+GGG 0.547025 2_2:-33525078 Msa0248800:CDS
ATAGCAGTAGGTAGTAGTCC+TGG 0.548685 2_2:+33524901 None:intergenic
TCAAGTTTCCTTCGCCGCAA+AGG 0.552060 2_2:+33526847 None:intergenic
TTTATAGGTGGAATCTTGGA+AGG 0.555229 2_2:+33527825 None:intergenic
CGGTTTGCCTGGTTCCCTTG+AGG 0.555346 2_2:-33527409 Msa0248800:CDS
TCGAAATATTAACAGTAATG+TGG 0.555670 2_2:-33527172 Msa0248800:CDS
CGAACAAACAATGTTCGAGA+AGG 0.555932 2_2:+33527192 None:intergenic
CATAAGCCCCAAATATTTGG+CGG 0.558156 2_2:+33526625 None:intergenic
ACATATTGTTGGAGTTGGAG+GGG 0.558653 2_2:+33523534 None:intergenic
TAATGTTGGCTATAGAGGCA+TGG 0.560617 2_2:-33525079 Msa0248800:CDS
ATGAAGTTTCAGATGACTTG+GGG 0.561315 2_2:+33525109 None:intergenic
AGACATTCCATGGGAAGAAG+TGG 0.561680 2_2:-33524083 Msa0248800:CDS
GACTGGCATCAGATGAAGCA+TGG 0.565319 2_2:+33527745 None:intergenic
AGATATCAATCAAGGAACCT+TGG 0.566566 2_2:-33526688 Msa0248800:CDS
TTCCTCTGGCTACTTTCCAA+AGG 0.571135 2_2:-33523471 Msa0248800:CDS
AGCCAACCAAACCTTCAGCT+TGG 0.571354 2_2:-33525302 Msa0248800:CDS
TGTGATTATTACCATCGTCA+AGG 0.571361 2_2:+33527502 None:intergenic
CCAAAATTTAGTTCATATCG+TGG 0.572272 2_2:-33525423 Msa0248800:CDS
GTTAGTTTGAGGTTCAGGGT+TGG 0.573526 2_2:-33523198 Msa0248800:three_prime_UTR
TTAAATAGGAGTGACATAGC+TGG 0.575075 2_2:-33526378 Msa0248800:CDS
ACTTCATTGATGAATAATGT+TGG 0.575278 2_2:-33525093 Msa0248800:CDS
TTGGTGCATCAACCTCAAAT+GGG 0.575610 2_2:-33525386 Msa0248800:CDS
AAAATCAAGGCATGGTGCGT+TGG 0.576124 2_2:-33527793 Msa0248800:CDS
TCTTTACCTAATGGTGTGGG+AGG 0.577294 2_2:-33527252 Msa0248800:CDS
GTGATTATTACCATCGTCAA+GGG 0.577460 2_2:+33527503 None:intergenic
AGGACTACTACCTACTGCTA+TGG 0.577598 2_2:-33524899 Msa0248800:CDS
GGGAGGCGGAGCTGTTGCTG+GGG 0.579092 2_2:-33527235 Msa0248800:CDS
ACAACCAGCAACCATTTACC+GGG 0.579683 2_2:-33525597 Msa0248800:CDS
ATGGGTCTAGGGCACAATGA+TGG 0.580869 2_2:-33525060 Msa0248800:CDS
TGAAGGTTTGGTTGGCTCTG+AGG 0.581671 2_2:+33525308 None:intergenic
GATGGCCTTGACCAAGCTGA+AGG 0.583358 2_2:+33525291 None:intergenic
TTAGGAGTGGTGAAGATACA+AGG 0.586418 2_2:-33524783 Msa0248800:CDS
ACCATTAGGTAAAGAATAAG+GGG 0.586598 2_2:+33527260 None:intergenic
TAATGAGCTAGAAAAGAGAC+TGG 0.586620 2_2:+33527728 None:intergenic
AACCTCAAATGGGTCGTCAG+TGG 0.586729 2_2:-33525376 Msa0248800:CDS
TTCGTCATCATCAGGAAGCA+TGG 0.588948 2_2:+33527470 None:intergenic
CCAAACCTTCAGCTTGGTCA+AGG 0.591925 2_2:-33525296 Msa0248800:CDS
GTGAAACTGAGAACGTTGCT+AGG 0.592031 2_2:-33528407 Msa0248800:intron
CTTTCAAAAGGCAAACCTGA+AGG 0.593340 2_2:+33525147 None:intergenic
TAGAATGGAATAATAAGTGA+TGG 0.596556 2_2:+33524275 None:intergenic
CTAAGTTGATGTCCCACAGA+TGG 0.596948 2_2:+33525273 None:intergenic
TATATACTGCATGTAAACAC+AGG 0.597214 2_2:-33526939 Msa0248800:CDS
GGAACTAGAAACGGATCCAC+AGG 0.598958 2_2:-33527346 Msa0248800:CDS
CAGGTGGGAGCAAAAGCTGA+AGG 0.599573 2_2:-33523306 Msa0248800:three_prime_UTR
TTATGTTGATATCTTTGACA+CGG 0.601418 2_2:-33523045 Msa0248800:three_prime_UTR
GTAAAACTCTCCATAGCAGT+AGG 0.602877 2_2:+33524889 None:intergenic
ACTCTACATCTTCTCATACA+AGG 0.605160 2_2:+33523416 None:intergenic
AACTTATGATGCCTCTTGTG+AGG 0.615498 2_2:+33526447 None:intergenic
AAGCCCCAAATATTTGGCGG+AGG 0.615848 2_2:+33526628 None:intergenic
AGACCTCCGCCAAATATTTG+GGG 0.617167 2_2:-33526631 Msa0248800:CDS
GACATTCCATGGGAAGAAGT+GGG 0.618165 2_2:-33524082 Msa0248800:CDS
GGACTTCCCCATAGAAACTG+TGG 0.618606 2_2:+33525339 None:intergenic
CTGCTGAGATGAACTGACAA+AGG 0.619330 2_2:+33525200 None:intergenic
CAAGTGGGTTCACCTCTAGC+CGG 0.621729 2_2:-33525858 Msa0248800:CDS
CCAAGAAATATGCCTGACAA+TGG 0.622245 2_2:-33524988 Msa0248800:CDS
GGCAGAAAGGTGATGCAATG+AGG 0.624860 2_2:-33527970 Msa0248800:CDS
CGATCCATCTACTCCTAACA+CGG 0.628297 2_2:+33524863 None:intergenic
TGGCGTATGCTCGAATCCAA+GGG 0.629165 2_2:-33524029 Msa0248800:CDS
ATACTCTTCCAAGTCCTCAA+GGG 0.629251 2_2:+33527395 None:intergenic
GCTTGGTCAAGGCCATCTGT+GGG 0.630534 2_2:-33525285 Msa0248800:CDS
CTATTGGCCAGGACATAGGA+AGG 0.630779 2_2:-33525524 Msa0248800:CDS
AGGGTTGGTGAGACTACATG+AGG 0.631236 2_2:-33523183 Msa0248800:three_prime_UTR
TGAGTTGAAATTAGATCTAG+CGG 0.632019 2_2:+33525461 None:intergenic
TGAGGTTGATGCACCAAACG+AGG 0.632584 2_2:+33525392 None:intergenic
AATATTTGGGGCTTATGGAG+AGG 0.633083 2_2:-33526619 Msa0248800:CDS
CTTAATGATTCCCTTGACGA+TGG 0.633501 2_2:-33527513 Msa0248800:CDS
GACTTAGATAAGATTAGGAG+TGG 0.634677 2_2:-33524796 Msa0248800:CDS
CCTGGCGGAGAACCGGCTAG+AGG 0.637705 2_2:+33525846 None:intergenic
AGTAGATGGATCGACAACAA+TGG 0.640609 2_2:-33524853 Msa0248800:CDS
GCATAAAGCTTGAACCAAGT+CGG 0.641212 2_2:-33526350 Msa0248800:CDS
TAAGGGAAACTCCTCACAAG+AGG 0.642869 2_2:-33526458 Msa0248800:CDS
ACAGCTGGAAAATCAAGGCA+TGG 0.645224 2_2:-33527801 Msa0248800:CDS
AAATATTAACAGTAATGTGG+AGG 0.645511 2_2:-33527169 Msa0248800:CDS
TTGCAGAATAAATGCAACGT+CGG 0.645819 2_2:-33524323 Msa0248800:intron
TCCACAGGAAAGCCTCAGTG+TGG 0.653629 2_2:-33527331 Msa0248800:CDS
TTCACTGTGTTCGACAACTG+TGG 0.653764 2_2:+33525555 None:intergenic
ATATACTGCATGTAAACACA+GGG 0.655050 2_2:-33526938 Msa0248800:CDS
CCACAGGAAAGCCTCAGTGT+GGG 0.657049 2_2:-33527330 Msa0248800:CDS
CCCACACTGAGGCTTTCCTG+TGG 0.660232 2_2:+33527330 None:intergenic
AGGTGGGAGCAAAAGCTGAA+GGG 0.663137 2_2:-33523305 Msa0248800:three_prime_UTR
GGCTTATGGAGAGGTCAAAG+AGG 0.663878 2_2:-33526610 Msa0248800:intron
ACAGTTGTCGAACACAGTGA+AGG 0.664160 2_2:-33525553 Msa0248800:CDS
ATCCAAATTGAAAACTACCA+AGG 0.664209 2_2:+33526671 None:intergenic
CTTGAACCAAGTCGGCCTGG+AGG 0.672542 2_2:-33526342 Msa0248800:CDS
ACCGCTCCACAGTTTCTATG+GGG 0.675690 2_2:-33525345 Msa0248800:CDS
CTGAGTGGAAGACAATAGGT+CGG 0.676153 2_2:+33523947 None:intergenic
TATGTCCTGGCCAATAGTTG+CGG 0.676299 2_2:+33525530 None:intergenic
GGGTTGGTGAGACTACATGA+GGG 0.692304 2_2:-33523182 Msa0248800:three_prime_UTR
CAGCTTCAGAACCATCTGAG+TGG 0.694749 2_2:+33523932 None:intergenic
ATACTGCATGTAAACACAGG+GGG 0.695902 2_2:-33526936 Msa0248800:CDS
TCCCCATAGAAACTGTGGAG+CGG 0.698213 2_2:+33525344 None:intergenic
ATCCTTTGGAAAGTAGCCAG+AGG 0.701334 2_2:+33523469 None:intergenic
ATGTGGAGGATACAGAGCTG+CGG 0.709896 2_2:-33527155 Msa0248800:CDS
ACTTATTATTCCATTCTACG+AGG 0.712441 2_2:-33524270 Msa0248800:intron
GCATAGCTGTCCGAGCAGCG+CGG 0.717777 2_2:+33526887 None:intergenic
GGTTGGTGAGACTACATGAG+GGG 0.723594 2_2:-33523181 Msa0248800:three_prime_UTR
CCATTAGGTAAAGAATAAGG+GGG 0.735123 2_2:+33527261 None:intergenic
ACTTAGATATACCCACACTG+AGG 0.765751 2_2:+33527319 None:intergenic
TATACTGCATGTAAACACAG+GGG 0.784450 2_2:-33526937 Msa0248800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATATTTTTGATTCAAAAT+AGG - chr2_2:33523743-33523762 Msa0248800:intron 10.0%
!!! TTTATTAAAATTTTCATAAC+AGG - chr2_2:33525887-33525906 Msa0248800:CDS 10.0%
!!! TCTTATTAAATTTTATTTTG+CGG - chr2_2:33527390-33527409 Msa0248800:CDS 10.0%
!!! AATTTTTATTTTCAGCAATA+TGG - chr2_2:33524616-33524635 Msa0248800:intron 15.0%
!! TGAACAATTAATAAATATCT+CGG + chr2_2:33526947-33526966 None:intergenic 15.0%
!! AGATCTATAAATATTTGCAT+TGG - chr2_2:33523335-33523354 Msa0248800:three_prime_UTR 20.0%
!! CTTATATCCATAAACAAATA+AGG + chr2_2:33523364-33523383 None:intergenic 20.0%
!!! CTATAAGAATAATGAACTTT+TGG + chr2_2:33523454-33523473 None:intergenic 20.0%
!! ATTATTCTTATAGATGTTGA+AGG - chr2_2:33523461-33523480 Msa0248800:CDS 20.0%
!!! AGTTTTCTATGTTTTATGAT+GGG - chr2_2:33523519-33523538 Msa0248800:CDS 20.0%
!!! GAGTTATTTTCTGATATTAT+AGG + chr2_2:33523580-33523599 None:intergenic 20.0%
!!! TATCTTTTTGTTTTTTGAAG+AGG - chr2_2:33523600-33523619 Msa0248800:intron 20.0%
!!! ATCTTTTTGTTTTTTGAAGA+GGG - chr2_2:33523601-33523620 Msa0248800:intron 20.0%
!!! TCATGAGATTTTATAAAACA+TGG + chr2_2:33523955-33523974 None:intergenic 20.0%
!!! TTTTATAAAATCTCATGAAC+TGG - chr2_2:33523957-33523976 Msa0248800:CDS 20.0%
!! AACTTAAATGAAACTGAAAA+TGG - chr2_2:33523998-33524017 Msa0248800:CDS 20.0%
!! AAACTTGAAATTAAGATGAA+TGG - chr2_2:33525094-33525113 Msa0248800:CDS 20.0%
!! AACTTGAAATTAAGATGAAT+GGG - chr2_2:33525095-33525114 Msa0248800:CDS 20.0%
!! AAATTAAGAAACATTTGATG+AGG - chr2_2:33525384-33525403 Msa0248800:CDS 20.0%
!! AAAATTGTTGCGTAAATTAT+GGG - chr2_2:33525430-33525449 Msa0248800:CDS 20.0%
!!! TTTGGTAAAACTCATTTTAT+GGG + chr2_2:33525522-33525541 None:intergenic 20.0%
!!! ATTTGGTAAAACTCATTTTA+TGG + chr2_2:33525523-33525542 None:intergenic 20.0%
!! TAACACTTTATTGACATATT+TGG + chr2_2:33525540-33525559 None:intergenic 20.0%
!!! AAATTTTCATAACAGGTAAT+TGG - chr2_2:33525894-33525913 Msa0248800:CDS 20.0%
!!! AAATTTTATTGGGAAATATG+TGG + chr2_2:33526108-33526127 None:intergenic 20.0%
!! ATAATCGTTCATACTTATTT+GGG + chr2_2:33526858-33526877 None:intergenic 20.0%
!! GAACAATTAATAAATATCTC+GGG + chr2_2:33526946-33526965 None:intergenic 20.0%
!!! NNNNNNGTGATTTTCATCAA+TGG + chr2_2:33527007-33527026 None:intergenic 20.0%
!! GATATCAAGGAAATTTATTA+AGG - chr2_2:33527421-33527440 Msa0248800:CDS 20.0%
!!! GTTTTAACATCTGATGAATT+TGG - chr2_2:33523139-33523158 Msa0248800:three_prime_UTR 25.0%
!! TTGGTTTCCTTATTTGTTTA+TGG - chr2_2:33523354-33523373 Msa0248800:three_prime_UTR 25.0%
!!! CTTTTGGTTAAATTTGCAAT+AGG + chr2_2:33523438-33523457 None:intergenic 25.0%
! AACCAGAATCAAGAATAATT+GGG + chr2_2:33523492-33523511 None:intergenic 25.0%
! AAACCAGAATCAAGAATAAT+TGG + chr2_2:33523493-33523512 None:intergenic 25.0%
!! CAGTTTTCTATGTTTTATGA+TGG - chr2_2:33523518-33523537 Msa0248800:CDS 25.0%
!! TATTTTCTGATATTATAGGC+AGG + chr2_2:33523576-33523595 None:intergenic 25.0%
!!! TCTTTTGATCCTTCATTTTT+CGG - chr2_2:33523648-33523667 Msa0248800:intron 25.0%
! CAAGACAAAACAATAGAATT+TGG + chr2_2:33523681-33523700 None:intergenic 25.0%
!!! CAAATTCTATTGTTTTGTCT+TGG - chr2_2:33523679-33523698 Msa0248800:intron 25.0%
!! AACTGAAAATGGTTTTCAAT+CGG - chr2_2:33524009-33524028 Msa0248800:CDS 25.0%
!!! TATGATCTTTTTGATAGTAG+TGG - chr2_2:33524217-33524236 Msa0248800:intron 25.0%
! TCGAAATATTAACAGTAATG+TGG - chr2_2:33524420-33524439 Msa0248800:intron 25.0%
! AAATATTAACAGTAATGTGG+AGG - chr2_2:33524423-33524442 Msa0248800:intron 25.0%
! AAGATATACTATTCAATCAG+AGG + chr2_2:33524547-33524566 None:intergenic 25.0%
!!! CTTTTCTTTTTTGACTTTGT+AGG - chr2_2:33524865-33524884 Msa0248800:CDS 25.0%
! CAGCACTTAAATCATTAAAT+AGG - chr2_2:33525200-33525219 Msa0248800:CDS 25.0%
!! AACAATTTTCAAAAGTGGAA+AGG + chr2_2:33525419-33525438 None:intergenic 25.0%
! GAAAATTGTTGCGTAAATTA+TGG - chr2_2:33525429-33525448 Msa0248800:CDS 25.0%
! ATCAAAGATAAAAATGCAAG+AGG + chr2_2:33525859-33525878 None:intergenic 25.0%
!! TCTTGCATTTTTATCTTTGA+TGG - chr2_2:33525858-33525877 Msa0248800:CDS 25.0%
! ACAAATATAAATCATTCTCC+TGG - chr2_2:33525953-33525972 Msa0248800:intron 25.0%
! ACTTCATTGATGAATAATGT+TGG - chr2_2:33526499-33526518 Msa0248800:intron 25.0%
! TAAGTATAGAAGATCTCATT+CGG + chr2_2:33526642-33526661 None:intergenic 25.0%
! CATAATCGTTCATACTTATT+TGG + chr2_2:33526859-33526878 None:intergenic 25.0%
! ACATATACCTTAAAGTCAAT+TGG + chr2_2:33527151-33527170 None:intergenic 25.0%
! ATTGCAAATTGCAAAAATTC+GGG + chr2_2:33527228-33527247 None:intergenic 25.0%
! CATTGCAAATTGCAAAAATT+CGG + chr2_2:33527229-33527248 None:intergenic 25.0%
! TAGAATGGAATAATAAGTGA+TGG + chr2_2:33527320-33527339 None:intergenic 25.0%
!! GGTTTGTATGAGAATATTTT+TGG - chr2_2:33527343-33527362 Msa0248800:CDS 25.0%
!!! TCAAACTTGAATTTTGGAAA+TGG + chr2_2:33527606-33527625 None:intergenic 25.0%
! AATATACATATTGTTGGAGT+TGG + chr2_2:33528066-33528085 None:intergenic 25.0%
! GTAATTTGAATGTCAATATG+TGG - chr2_2:33528360-33528379 Msa0248800:intron 25.0%
! TTATGTTGATATCTTTGACA+CGG - chr2_2:33528547-33528566 Msa0248800:CDS 25.0%
GTCATAGGTATGTGAATAAT+TGG + chr2_2:33523041-33523060 None:intergenic 30.0%
AGCAATATTATCACAGTCAT+AGG + chr2_2:33523056-33523075 None:intergenic 30.0%
GGTTTAACATCTGATGAATT+TGG - chr2_2:33523160-33523179 Msa0248800:three_prime_UTR 30.0%
!! GTTTAACTCTAAAATGAGGA+GGG + chr2_2:33523244-33523263 None:intergenic 30.0%
!! TCTGGTTTAACTCTAAAATG+AGG + chr2_2:33523248-33523267 None:intergenic 30.0%
TAAATTTCTGCATGTACATC+TGG + chr2_2:33523266-33523285 None:intergenic 30.0%
TACATGCAGAAATTTATGCA+TGG - chr2_2:33523270-33523289 Msa0248800:three_prime_UTR 30.0%
TGTAAGAAATTTGACAGCAA+TGG - chr2_2:33523387-33523406 Msa0248800:three_prime_UTR 30.0%
! TTTGCAATAGGAATTTTCAC+TGG + chr2_2:33523426-33523445 None:intergenic 30.0%
ATCCCAATTATTCTTGATTC+TGG - chr2_2:33523487-33523506 Msa0248800:CDS 30.0%
! TATCACATACACTTTTCATG+TGG + chr2_2:33523899-33523918 None:intergenic 30.0%
GATGGTAATAATCACACAAA+CGG - chr2_2:33524097-33524116 Msa0248800:intron 30.0%
!!! ATGGATGATTTTGACTTAAG+CGG - chr2_2:33524163-33524182 Msa0248800:intron 30.0%
ACCATTAGGTAAAGAATAAG+GGG + chr2_2:33524335-33524354 None:intergenic 30.0%
CACCATTAGGTAAAGAATAA+GGG + chr2_2:33524336-33524355 None:intergenic 30.0%
ACACCATTAGGTAAAGAATA+AGG + chr2_2:33524337-33524356 None:intergenic 30.0%
TTATTCTTTACCTAATGGTG+TGG - chr2_2:33524336-33524355 Msa0248800:intron 30.0%
TATTCTTTACCTAATGGTGT+GGG - chr2_2:33524337-33524356 Msa0248800:intron 30.0%
AAAGCTACTAGTACAAACTA+TGG - chr2_2:33524502-33524521 Msa0248800:intron 30.0%
GTGTTTACATGCAGTATATA+GGG + chr2_2:33524653-33524672 None:intergenic 30.0%
TGTGTTTACATGCAGTATAT+AGG + chr2_2:33524654-33524673 None:intergenic 30.0%
TATATACTGCATGTAAACAC+AGG - chr2_2:33524653-33524672 Msa0248800:intron 30.0%
ATATACTGCATGTAAACACA+GGG - chr2_2:33524654-33524673 Msa0248800:intron 30.0%
CATTGCAAAATAAACCTTTG+CGG - chr2_2:33524731-33524750 Msa0248800:CDS 30.0%
!! CATTCACTTTTCAATACCAA+AGG - chr2_2:33524768-33524787 Msa0248800:CDS 30.0%
CCAACATAATATGAATGACA+TGG + chr2_2:33524845-33524864 None:intergenic 30.0%
CCATGTCATTCATATTATGT+TGG - chr2_2:33524842-33524861 Msa0248800:CDS 30.0%
TGATTGATATCTTTGTCTGA+TGG + chr2_2:33524896-33524915 None:intergenic 30.0%
TCAGACAAAGATATCAATCA+AGG - chr2_2:33524896-33524915 Msa0248800:CDS 30.0%
!! AACCTTGGTAGTTTTCAATT+TGG - chr2_2:33524919-33524938 Msa0248800:CDS 30.0%
ATCCAAATTGAAAACTACCA+AGG + chr2_2:33524924-33524943 None:intergenic 30.0%
TTGAAATTAAGATGAATGGG+TGG - chr2_2:33525098-33525117 Msa0248800:CDS 30.0%
!! GTGGATATTTTTGCAGATAA+GGG - chr2_2:33525117-33525136 Msa0248800:CDS 30.0%
AAGTGCGTACACTAATAATT+TGG - chr2_2:33525283-33525302 Msa0248800:CDS 30.0%
! TACGCAACAATTTTCAAAAG+TGG + chr2_2:33525424-33525443 None:intergenic 30.0%
AATTACATGCCAGAAAACAA+AGG + chr2_2:33525629-33525648 None:intergenic 30.0%
!! CTAGCGGATGAAATTTTATT+GGG + chr2_2:33526118-33526137 None:intergenic 30.0%
!! TCTAGCGGATGAAATTTTAT+TGG + chr2_2:33526119-33526138 None:intergenic 30.0%
! TGAGTTGAAATTAGATCTAG+CGG + chr2_2:33526134-33526153 None:intergenic 30.0%
!!! TATGAACTAAATTTTGGCTC+TGG + chr2_2:33526166-33526185 None:intergenic 30.0%
! CCACGATATGAACTAAATTT+TGG + chr2_2:33526172-33526191 None:intergenic 30.0%
! CCAAAATTTAGTTCATATCG+TGG - chr2_2:33526169-33526188 Msa0248800:intron 30.0%
CATCAACTTAGTACATCAAA+TGG - chr2_2:33526331-33526350 Msa0248800:CDS 30.0%
AATGAAGTTTCAGATGACTT+GGG + chr2_2:33526487-33526506 None:intergenic 30.0%
! ATGAATAATGTTGGCTATAG+AGG - chr2_2:33526508-33526527 Msa0248800:intron 30.0%
GGAAATTACATGCTTAATAG+TGG - chr2_2:33526553-33526572 Msa0248800:intron 30.0%
! ATACTTAGCCCTGTATTTTT+AGG - chr2_2:33526655-33526674 Msa0248800:CDS 30.0%
GACCATTACCTAAAAATACA+GGG + chr2_2:33526666-33526685 None:intergenic 30.0%
TTGCAAATTGCAAAAATTCG+GGG + chr2_2:33527227-33527246 None:intergenic 30.0%
TGCATTTATTCTGCAATTGA+GGG + chr2_2:33527265-33527284 None:intergenic 30.0%
TTGCATTTATTCTGCAATTG+AGG + chr2_2:33527266-33527285 None:intergenic 30.0%
ACTTATTATTCCATTCTACG+AGG - chr2_2:33527322-33527341 Msa0248800:CDS 30.0%
! GAAAAGGTTAATTTTTCCTC+AGG - chr2_2:33527456-33527475 Msa0248800:CDS 30.0%
GACGAATTCATTGATATGTT+TGG - chr2_2:33527480-33527499 Msa0248800:CDS 30.0%
TAGTGAAAAAGTTGCTTCTT+TGG - chr2_2:33527543-33527562 Msa0248800:CDS 30.0%
!! ATTTTGGAAATGGTTTACGA+GGG + chr2_2:33527596-33527615 None:intergenic 30.0%
!! AATTTTGGAAATGGTTTACG+AGG + chr2_2:33527597-33527616 None:intergenic 30.0%
! CGTTCATCAAACTTGAATTT+TGG + chr2_2:33527612-33527631 None:intergenic 30.0%
CTTCTCTGGTAATTGATATT+TGG - chr2_2:33527744-33527763 Msa0248800:CDS 30.0%
! TGGTAATTGATATTTGGAAC+TGG - chr2_2:33527750-33527769 Msa0248800:CDS 30.0%
!! TTTTCGTAGTATTTGTTGCT+AGG - chr2_2:33527793-33527812 Msa0248800:CDS 30.0%
AAGTATGGATGAAGACAATT+AGG + chr2_2:33528013-33528032 None:intergenic 30.0%
CTCCAACAATATGTATATTC+AGG - chr2_2:33528067-33528086 Msa0248800:intron 30.0%
TGCCTGAATATACATATTGT+TGG + chr2_2:33528072-33528091 None:intergenic 30.0%
TCTTCTCATACAAGGTTAAT+TGG + chr2_2:33528171-33528190 None:intergenic 30.0%
!! TTCAAAAGTTTGGTGCATTT+CGG - chr2_2:33528250-33528269 Msa0248800:intron 30.0%
!! CTTCAGTTTTGCTCATTTTT+TGG - chr2_2:33528324-33528343 Msa0248800:intron 30.0%
!!! TTTTGCTCATTTTTTGGTCA+TGG - chr2_2:33528330-33528349 Msa0248800:intron 30.0%
! TTTAGAGAGTAGTTAGTTTG+AGG - chr2_2:33528383-33528402 Msa0248800:intron 30.0%
AAGACTTTCTGATACATTAG+AGG + chr2_2:33528483-33528502 None:intergenic 30.0%
AATTGTTCTTAACCATTGCC+TGG - chr2_2:33523011-33523030 Msa0248800:three_prime_UTR 35.0%
! ATGTGAATAATTGGTGTTCC+AGG + chr2_2:33523032-33523051 None:intergenic 35.0%
CTTTGCAGTGAAATGTTATG+TGG + chr2_2:33523106-33523125 None:intergenic 35.0%
!! GGTTTAACTCTAAAATGAGG+AGG + chr2_2:33523245-33523264 None:intergenic 35.0%
TTTATAGGTGGAATCTTGGA+AGG + chr2_2:33523770-33523789 None:intergenic 35.0%
TGTGTTTATAGGTGGAATCT+TGG + chr2_2:33523774-33523793 None:intergenic 35.0%
! GATTTTCCAGCTGTGTTTAT+AGG + chr2_2:33523785-33523804 None:intergenic 35.0%
TAAACACAGCTGGAAAATCA+AGG - chr2_2:33523786-33523805 Msa0248800:intron 35.0%
TAATGAGCTAGAAAAGAGAC+TGG + chr2_2:33523867-33523886 None:intergenic 35.0%
AAACAGAAATCAGAGCTAGT+AGG + chr2_2:33523929-33523948 None:intergenic 35.0%
! GTTTCATTTAAGTTCACTGC+AGG + chr2_2:33523992-33524011 None:intergenic 35.0%
!! CTTCAAAAAGCATCATCAAG+AGG - chr2_2:33524051-33524070 Msa0248800:CDS 35.0%
GTGATTATTACCATCGTCAA+GGG + chr2_2:33524092-33524111 None:intergenic 35.0%
TGTGATTATTACCATCGTCA+AGG + chr2_2:33524093-33524112 None:intergenic 35.0%
!! GATCTTTTTGATAGTAGTGG+AGG - chr2_2:33524220-33524239 Msa0248800:intron 35.0%
!! TTTTGATAGTAGTGGAGGTT+TGG - chr2_2:33524225-33524244 Msa0248800:intron 35.0%
CCATTAGGTAAAGAATAAGG+GGG + chr2_2:33524334-33524353 None:intergenic 35.0%
ATACTATTCAATCAGAGGCA+AGG + chr2_2:33524542-33524561 None:intergenic 35.0%
TATACTGCATGTAAACACAG+GGG - chr2_2:33524655-33524674 Msa0248800:intron 35.0%
CTGTTTCAGTAAGAAACCTT+TGG + chr2_2:33524787-33524806 None:intergenic 35.0%
AGATATCAATCAAGGAACCT+TGG - chr2_2:33524904-33524923 Msa0248800:CDS 35.0%
! AGGTCTTCATTTGAAACTGA+TGG + chr2_2:33524947-33524966 None:intergenic 35.0%
! TTTTTACATCCGAGTCTTTC+AGG - chr2_2:33525031-33525050 Msa0248800:CDS 35.0%
! TTTTACATCCGAGTCTTTCA+GGG - chr2_2:33525032-33525051 Msa0248800:CDS 35.0%
!! GGTGGATATTTTTGCAGATA+AGG - chr2_2:33525116-33525135 Msa0248800:CDS 35.0%
TTAAATAGGAGTGACATAGC+TGG - chr2_2:33525214-33525233 Msa0248800:CDS 35.0%
ACAATAGCAATCTGTTCTTC+TGG - chr2_2:33525340-33525359 Msa0248800:CDS 35.0%
TACTGAGACAGCCTTAATAT+TGG - chr2_2:33525487-33525506 Msa0248800:CDS 35.0%
TATGTGAGAGTAGAGAAACT+CGG - chr2_2:33525558-33525577 Msa0248800:CDS 35.0%
AAACAAAGGAGGCAGATATA+TGG + chr2_2:33525615-33525634 None:intergenic 35.0%
! TCGAAGTTTTCGATATCAAG+TGG - chr2_2:33525718-33525737 Msa0248800:intron 35.0%
! CGAAGTTTTCGATATCAAGT+GGG - chr2_2:33525719-33525738 Msa0248800:intron 35.0%
! ATGCTACTTCATGATGACAA+TGG + chr2_2:33525804-33525823 None:intergenic 35.0%
TGCAAAATTGAAGCTAATCC+CGG + chr2_2:33526016-33526035 None:intergenic 35.0%
! AATTGTTCTGACTTGAGTAC+GGG + chr2_2:33526372-33526391 None:intergenic 35.0%
! GAATTGTTCTGACTTGAGTA+CGG + chr2_2:33526373-33526392 None:intergenic 35.0%
CAACATCATCATCATCATGT+CGG - chr2_2:33526415-33526434 Msa0248800:CDS 35.0%
ATGAAGTTTCAGATGACTTG+GGG + chr2_2:33526486-33526505 None:intergenic 35.0%
CAATGAAGTTTCAGATGACT+TGG + chr2_2:33526488-33526507 None:intergenic 35.0%
ATGCTTAATAGTGGCATTTC+TGG - chr2_2:33526562-33526581 Msa0248800:intron 35.0%
AAGTTTGATGAACCATTGTC+AGG + chr2_2:33526619-33526638 None:intergenic 35.0%
!!! AGCCCTGTATTTTTAGGTAA+TGG - chr2_2:33526661-33526680 Msa0248800:CDS 35.0%
GGACCATTACCTAAAAATAC+AGG + chr2_2:33526667-33526686 None:intergenic 35.0%
! ATAGCTTCTTGTTGTCAACT+TGG + chr2_2:33526768-33526787 None:intergenic 35.0%
AGCTCGACTTAGATAAGATT+AGG - chr2_2:33526791-33526810 Msa0248800:intron 35.0%
GACTTAGATAAGATTAGGAG+TGG - chr2_2:33526796-33526815 Msa0248800:intron 35.0%
! CATTTTTGATGTGTATCTGC+AGG + chr2_2:33526974-33526993 None:intergenic 35.0%
TGGCAGATAGAGAAAATCAT+AGG + chr2_2:33527131-33527150 None:intergenic 35.0%
! CTATCTGCCAATTGACTTTA+AGG - chr2_2:33527141-33527160 Msa0248800:intron 35.0%
TTTGCAATTTGCAATGCTGA+TGG - chr2_2:33527233-33527252 Msa0248800:CDS 35.0%
TTTATTCTGCAATTGAGGGA+GGG + chr2_2:33527261-33527280 None:intergenic 35.0%
ATTTATTCTGCAATTGAGGG+AGG + chr2_2:33527262-33527281 None:intergenic 35.0%
TTGCAGAATAAATGCAACGT+CGG - chr2_2:33527269-33527288 Msa0248800:CDS 35.0%
AAACTTTGTCTGTTCTTCTC+TGG - chr2_2:33527730-33527749 Msa0248800:CDS 35.0%
GTATGATCTGCAAGAAAGTA+TGG + chr2_2:33528028-33528047 None:intergenic 35.0%
TACATATTGTTGGAGTTGGA+GGG + chr2_2:33528062-33528081 None:intergenic 35.0%
ATACATATTGTTGGAGTTGG+AGG + chr2_2:33528063-33528082 None:intergenic 35.0%
TTACAATTAAGCGATTCCTC+TGG - chr2_2:33528107-33528126 Msa0248800:intron 35.0%
TTGGCATCCAAACTCATAAA+AGG + chr2_2:33528152-33528171 None:intergenic 35.0%
ACTCTACATCTTCTCATACA+AGG + chr2_2:33528179-33528198 None:intergenic 35.0%
! AGTAGTTAGTTTGAGGTTCA+GGG - chr2_2:33528390-33528409 Msa0248800:intron 35.0%
! ATAATTGGTGTTCCAGGCAA+TGG + chr2_2:33523026-33523045 None:intergenic 40.0%
GCATGGCTATTATGCTCTTT+CGG - chr2_2:33523287-33523306 Msa0248800:three_prime_UTR 40.0%
CATGGCTATTATGCTCTTTC+GGG - chr2_2:33523288-33523307 Msa0248800:three_prime_UTR 40.0%
!!! GTTTTTTGAAGAGGGCAGAA+AGG - chr2_2:33523609-33523628 Msa0248800:intron 40.0%
GGACGTTTACCGAAAAATGA+AGG + chr2_2:33523660-33523679 None:intergenic 40.0%
ATTCCACCTATAAACACAGC+TGG - chr2_2:33523776-33523795 Msa0248800:intron 40.0%
TTTCCAGCTGTGTTTATAGG+TGG + chr2_2:33523782-33523801 None:intergenic 40.0%
! CACTTTTCATGTGGAAGAAC+AGG + chr2_2:33523890-33523909 None:intergenic 40.0%
CTTAATGATTCCCTTGACGA+TGG - chr2_2:33524079-33524098 Msa0248800:CDS 40.0%
AAAAGCTCTTCGTCATCATC+AGG + chr2_2:33524133-33524152 None:intergenic 40.0%
!! TGATGATGACGAAGAGCTTT+TGG - chr2_2:33524132-33524151 Msa0248800:intron 40.0%
ATACTCTTCCAAGTCCTCAA+GGG + chr2_2:33524200-33524219 None:intergenic 40.0%
! TGGAGGTTTGGAACTAGAAA+CGG - chr2_2:33524237-33524256 Msa0248800:intron 40.0%
ACTTAGATATACCCACACTG+AGG + chr2_2:33524276-33524295 None:intergenic 40.0%
!! AGCTTTTCTGATAGCTCTGT+TGG - chr2_2:33524298-33524317 Msa0248800:CDS 40.0%
CCCCCTTATTCTTTACCTAA+TGG - chr2_2:33524331-33524350 Msa0248800:intron 40.0%
CGAACAAACAATGTTCGAGA+AGG + chr2_2:33524403-33524422 None:intergenic 40.0%
! GGTGAGTTTAAGTTAGAGTG+AGG - chr2_2:33524471-33524490 Msa0248800:intron 40.0%
GCTACTAGTACAAACTATGG+TGG - chr2_2:33524505-33524524 Msa0248800:intron 40.0%
TCAGAGGCAAGGAGAAATAA+TGG + chr2_2:33524531-33524550 None:intergenic 40.0%
ATACTGCATGTAAACACAGG+GGG - chr2_2:33524656-33524675 Msa0248800:intron 40.0%
AAAATAAACCTTTGCGGCGA+AGG - chr2_2:33524737-33524756 Msa0248800:CDS 40.0%
AAGACCTCCGCCAAATATTT+GGG - chr2_2:33524960-33524979 Msa0248800:CDS 40.0%
CATAAGCCCCAAATATTTGG+CGG + chr2_2:33524970-33524989 None:intergenic 40.0%
CTCCATAAGCCCCAAATATT+TGG + chr2_2:33524973-33524992 None:intergenic 40.0%
! AATATTTGGGGCTTATGGAG+AGG - chr2_2:33524973-33524992 Msa0248800:CDS 40.0%
GTATGTTTCCCTGAAAGACT+CGG + chr2_2:33525043-33525062 None:intergenic 40.0%
AACTTATGATGCCTCTTGTG+AGG + chr2_2:33525148-33525167 None:intergenic 40.0%
GCATAAAGCTTGAACCAAGT+CGG - chr2_2:33525242-33525261 Msa0248800:CDS 40.0%
! ACTCATTTTATGGGACTGCA+AGG + chr2_2:33525513-33525532 None:intergenic 40.0%
!!! TATCTGCCTCCTTTGTTTTC+TGG - chr2_2:33525617-33525636 Msa0248800:CDS 40.0%
TACATGCCAGAAAACAAAGG+AGG + chr2_2:33525626-33525645 None:intergenic 40.0%
GAAAACTTCGAGACTCATCT+TGG + chr2_2:33525709-33525728 None:intergenic 40.0%
TTCATGATGACAATGGCACA+GGG + chr2_2:33525797-33525816 None:intergenic 40.0%
GTCAATGAACTCTGCTCAAT+AGG + chr2_2:33525935-33525954 None:intergenic 40.0%
! GGTTGTTGGGCTCATTATTT+TGG + chr2_2:33525981-33526000 None:intergenic 40.0%
! GTAAATGGTTGCTGGTTGTT+GGG + chr2_2:33525994-33526013 None:intergenic 40.0%
AACAACCAGCAACCATTTAC+CGG - chr2_2:33525994-33526013 Msa0248800:intron 40.0%
TTGAAGCTAATCCCGGTAAA+TGG + chr2_2:33526009-33526028 None:intergenic 40.0%
! TTTGGTGCATCAACCTCAAA+TGG - chr2_2:33526205-33526224 Msa0248800:intron 40.0%
TTGGTGCATCAACCTCAAAT+GGG - chr2_2:33526206-33526225 Msa0248800:intron 40.0%
CTTTCAAAAGGCAAACCTGA+AGG + chr2_2:33526448-33526467 None:intergenic 40.0%
!! CTTCAGGTTTGCCTTTTGAA+AGG - chr2_2:33526446-33526465 Msa0248800:CDS 40.0%
!!! TTGCCTTTTGAAAGGCACTT+CGG - chr2_2:33526454-33526473 Msa0248800:CDS 40.0%
! AAACCGAAGTGCCTTTCAAA+AGG + chr2_2:33526460-33526479 None:intergenic 40.0%
! TAATGTTGGCTATAGAGGCA+TGG - chr2_2:33526513-33526532 Msa0248800:intron 40.0%
! AATGTTGGCTATAGAGGCAT+GGG - chr2_2:33526514-33526533 Msa0248800:intron 40.0%
!! AGTGGCATTTCTGGTAATGT+TGG - chr2_2:33526571-33526590 Msa0248800:intron 40.0%
CCATTGTCAGGCATATTTCT+TGG + chr2_2:33526607-33526626 None:intergenic 40.0%
CCAAGAAATATGCCTGACAA+TGG - chr2_2:33526604-33526623 Msa0248800:intron 40.0%
! TTAGGTAATGGTCCTTATCC+AGG - chr2_2:33526673-33526692 Msa0248800:CDS 40.0%
GTAAAACTCTCCATAGCAGT+AGG + chr2_2:33526706-33526725 None:intergenic 40.0%
! AGAGTTTTACTGACCGTGTT+AGG - chr2_2:33526716-33526735 Msa0248800:intron 40.0%
AGTAGATGGATCGACAACAA+TGG - chr2_2:33526739-33526758 Msa0248800:intron 40.0%
TTAGGAGTGGTGAAGATACA+AGG - chr2_2:33526809-33526828 Msa0248800:intron 40.0%
GGATGAAACAGAAACTCAAC+AGG + chr2_2:33527206-33527225 None:intergenic 40.0%
CTCATACAAACCTCGTAGAA+TGG + chr2_2:33527335-33527354 None:intergenic 40.0%
!! TGCGGTTGATGATGATATCA+AGG - chr2_2:33527408-33527427 Msa0248800:CDS 40.0%
AAGGAAACGACAGCTAGAAA+AGG - chr2_2:33527440-33527459 Msa0248800:CDS 40.0%
ATCAATGAATTCGTCACCTG+AGG + chr2_2:33527475-33527494 None:intergenic 40.0%
!!! TTGGTTTTGCAGACATTCCA+TGG - chr2_2:33527499-33527518 Msa0248800:CDS 40.0%
!! TGGTTTTGCAGACATTCCAT+GGG - chr2_2:33527500-33527519 Msa0248800:CDS 40.0%
! GTAGTATTTGTTGCTAGGCT+TGG - chr2_2:33527798-33527817 Msa0248800:CDS 40.0%
!! TCTATGTAGCATCGACACTT+AGG - chr2_2:33527844-33527863 Msa0248800:intron 40.0%
ACATATTGTTGGAGTTGGAG+GGG + chr2_2:33528061-33528080 None:intergenic 40.0%
CTCATAAAAGGACCATCCTT+TGG + chr2_2:33528140-33528159 None:intergenic 40.0%
! GGATGGTCCTTTTATGAGTT+TGG - chr2_2:33528142-33528161 Msa0248800:intron 40.0%
!!! ACCAAACTTTTGAAGCTTGC+TGG + chr2_2:33528244-33528263 None:intergenic 40.0%
! TTTCGGTGAATTTTCTGCAC+AGG - chr2_2:33528267-33528286 Msa0248800:intron 40.0%
! GAGTAGTTAGTTTGAGGTTC+AGG - chr2_2:33528389-33528408 Msa0248800:intron 40.0%
GTGAAACTGAGAACGTTGCT+AGG - chr2_2:33523185-33523204 Msa0248800:three_prime_UTR 45.0%
TCTTTCGGGAATGCTAGAGT+AGG - chr2_2:33523302-33523321 Msa0248800:three_prime_UTR 45.0%
ACAGCTGGAAAATCAAGGCA+TGG - chr2_2:33523791-33523810 Msa0248800:intron 45.0%
AAAATCAAGGCATGGTGCGT+TGG - chr2_2:33523799-33523818 Msa0248800:intron 45.0%
TTCGTCATCATCAGGAAGCA+TGG + chr2_2:33524125-33524144 None:intergenic 45.0%
!! AGAGCTTTTGGCTGGCATAA+TGG - chr2_2:33524144-33524163 Msa0248800:intron 45.0%
! TTTGACTTAAGCGGTTTGCC+TGG - chr2_2:33524172-33524191 Msa0248800:intron 45.0%
CATACTCTTCCAAGTCCTCA+AGG + chr2_2:33524201-33524220 None:intergenic 45.0%
TCTTTACCTAATGGTGTGGG+AGG - chr2_2:33524340-33524359 Msa0248800:intron 45.0%
GAAGACCTCCGCCAAATATT+TGG - chr2_2:33524959-33524978 Msa0248800:CDS 45.0%
AGACCTCCGCCAAATATTTG+GGG - chr2_2:33524961-33524980 Msa0248800:CDS 45.0%
! CGCCAAATATTTGGGGCTTA+TGG - chr2_2:33524968-33524987 Msa0248800:CDS 45.0%
TAAGGGAAACTCCTCACAAG+AGG - chr2_2:33525134-33525153 Msa0248800:CDS 45.0%
GGACTGCAAGGCCAATATTA+AGG + chr2_2:33525501-33525520 None:intergenic 45.0%
GGTCAAGCTCTTGATTCAGT+TGG + chr2_2:33525688-33525707 None:intergenic 45.0%
ATCTCAAAGAACCAACCTGG+CGG + chr2_2:33525764-33525783 None:intergenic 45.0%
AGCATCTCAAAGAACCAACC+TGG + chr2_2:33525767-33525786 None:intergenic 45.0%
CTTCATGATGACAATGGCAC+AGG + chr2_2:33525798-33525817 None:intergenic 45.0%
!!! GGGCTCATTATTTTGGAACC+AGG + chr2_2:33525974-33525993 None:intergenic 45.0%
! GGTAAATGGTTGCTGGTTGT+TGG + chr2_2:33525995-33526014 None:intergenic 45.0%
ACAACCAGCAACCATTTACC+GGG - chr2_2:33525995-33526014 Msa0248800:intron 45.0%
TAATCCCGGTAAATGGTTGC+TGG + chr2_2:33526002-33526021 None:intergenic 45.0%
TTCACTGTGTTCGACAACTG+TGG + chr2_2:33526040-33526059 None:intergenic 45.0%
ACAGTTGTCGAACACAGTGA+AGG - chr2_2:33526039-33526058 Msa0248800:intron 45.0%
TATGTCCTGGCCAATAGTTG+CGG + chr2_2:33526065-33526084 None:intergenic 45.0%
GACATAGGAAGGAGTAGTCA+TGG - chr2_2:33526079-33526098 Msa0248800:intron 45.0%
!! GTTGGCTCTGAGGATAAGTT+TGG + chr2_2:33526277-33526296 None:intergenic 45.0%
!! CTAAGTTGATGTCCCACAGA+TGG + chr2_2:33526322-33526341 None:intergenic 45.0%
CTGCTGAGATGAACTGACAA+AGG + chr2_2:33526395-33526414 None:intergenic 45.0%
GTAGGTAGTAGTCCTGGATA+AGG + chr2_2:33526688-33526707 None:intergenic 45.0%
ATAGCAGTAGGTAGTAGTCC+TGG + chr2_2:33526694-33526713 None:intergenic 45.0%
AGGACTACTACCTACTGCTA+TGG - chr2_2:33526693-33526712 Msa0248800:CDS 45.0%
CGATCCATCTACTCCTAACA+CGG + chr2_2:33526732-33526751 None:intergenic 45.0%
AGACATTCCATGGGAAGAAG+TGG - chr2_2:33527509-33527528 Msa0248800:CDS 45.0%
GACATTCCATGGGAAGAAGT+GGG - chr2_2:33527510-33527529 Msa0248800:CDS 45.0%
CTGAGTGGAAGACAATAGGT+CGG + chr2_2:33527648-33527667 None:intergenic 45.0%
CCATCTGAGTGGAAGACAAT+AGG + chr2_2:33527652-33527671 None:intergenic 45.0%
CCTATTGTCTTCCACTCAGA+TGG - chr2_2:33527649-33527668 Msa0248800:intron 45.0%
GTGAAACAATGACGCAACCA+GGG + chr2_2:33527965-33527984 None:intergenic 45.0%
TGTGAAACAATGACGCAACC+AGG + chr2_2:33527966-33527985 None:intergenic 45.0%
! TTCCTCTGGCTACTTTCCAA+AGG - chr2_2:33528121-33528140 Msa0248800:intron 45.0%
! ATCCTTTGGAAAGTAGCCAG+AGG + chr2_2:33528126-33528145 None:intergenic 45.0%
! TCTGGCTACTTTCCAAAGGA+TGG - chr2_2:33528125-33528144 Msa0248800:intron 45.0%
GCCAGCAAGCTTCAAAAGTT+TGG - chr2_2:33528240-33528259 Msa0248800:intron 45.0%
! GGTGAATTTTCTGCACAGGT+GGG - chr2_2:33528271-33528290 Msa0248800:intron 45.0%
! GTTAGTTTGAGGTTCAGGGT+TGG - chr2_2:33528394-33528413 Msa0248800:intron 45.0%
GGCAGAAAGGTGATGCAATG+AGG - chr2_2:33523622-33523641 Msa0248800:intron 50.0%
GGTGCGTTGGAAGTTTCATC+TGG - chr2_2:33523812-33523831 Msa0248800:intron 50.0%
GACTGGCATCAGATGAAGCA+TGG + chr2_2:33523850-33523869 None:intergenic 50.0%
! GATGACGAAGAGCTTTTGGC+TGG - chr2_2:33524136-33524155 Msa0248800:intron 50.0%
GGAACTAGAAACGGATCCAC+AGG - chr2_2:33524246-33524265 Msa0248800:intron 50.0%
TTACCTAATGGTGTGGGAGG+CGG - chr2_2:33524343-33524362 Msa0248800:intron 50.0%
GTTGCTGGGGAACATCCATA+TGG - chr2_2:33524370-33524389 Msa0248800:intron 50.0%
CGAGAAGGATGCTCTCCATA+TGG + chr2_2:33524388-33524407 None:intergenic 50.0%
ATGTGGAGGATACAGAGCTG+CGG - chr2_2:33524437-33524456 Msa0248800:intron 50.0%
! AGAGCTGCGGACTCTTTTTG+AGG - chr2_2:33524450-33524469 Msa0248800:intron 50.0%
ATTATGACATCCGCGCTGCT+CGG - chr2_2:33524695-33524714 Msa0248800:intron 50.0%
TCAAGTTTCCTTCGCCGCAA+AGG + chr2_2:33524748-33524767 None:intergenic 50.0%
AAGCCCCAAATATTTGGCGG+AGG + chr2_2:33524967-33524986 None:intergenic 50.0%
GGCTTATGGAGAGGTCAAAG+AGG - chr2_2:33524982-33525001 Msa0248800:CDS 50.0%
ACAGTGAAGGCCGCAACTAT+TGG - chr2_2:33526052-33526071 Msa0248800:intron 50.0%
GCAACTATTGGCCAGGACAT+AGG - chr2_2:33526064-33526083 Msa0248800:intron 50.0%
CTATTGGCCAGGACATAGGA+AGG - chr2_2:33526068-33526087 Msa0248800:intron 50.0%
GACTACTCCTTCCTATGTCC+TGG + chr2_2:33526078-33526097 None:intergenic 50.0%
!! TGAGGTTGATGCACCAAACG+AGG + chr2_2:33526203-33526222 None:intergenic 50.0%
AACCTCAAATGGGTCGTCAG+TGG - chr2_2:33526216-33526235 Msa0248800:intron 50.0%
TTCCACTGACGACCCATTTG+AGG + chr2_2:33526221-33526240 None:intergenic 50.0%
TAGAAACTGTGGAGCGGTCA+AGG + chr2_2:33526245-33526264 None:intergenic 50.0%
TGACCGCTCCACAGTTTCTA+TGG - chr2_2:33526245-33526264 Msa0248800:intron 50.0%
GACCGCTCCACAGTTTCTAT+GGG - chr2_2:33526246-33526265 Msa0248800:intron 50.0%
ACCGCTCCACAGTTTCTATG+GGG - chr2_2:33526247-33526266 Msa0248800:intron 50.0%
TCCCCATAGAAACTGTGGAG+CGG + chr2_2:33526251-33526270 None:intergenic 50.0%
GGACTTCCCCATAGAAACTG+TGG + chr2_2:33526256-33526275 None:intergenic 50.0%
!! TGAAGGTTTGGTTGGCTCTG+AGG + chr2_2:33526287-33526306 None:intergenic 50.0%
AGCCAACCAAACCTTCAGCT+TGG - chr2_2:33526290-33526309 Msa0248800:intron 50.0%
! GACCAAGCTGAAGGTTTGGT+TGG + chr2_2:33526295-33526314 None:intergenic 50.0%
CCTTGACCAAGCTGAAGGTT+TGG + chr2_2:33526299-33526318 None:intergenic 50.0%
CCAAACCTTCAGCTTGGTCA+AGG - chr2_2:33526296-33526315 Msa0248800:intron 50.0%
! GCTATAGAGGCATGGGTCTA+GGG - chr2_2:33526521-33526540 Msa0248800:intron 50.0%
! ATGGGTCTAGGGCACAATGA+TGG - chr2_2:33526532-33526551 Msa0248800:intron 50.0%
CTGACCGTGTTAGGAGTAGA+TGG - chr2_2:33526725-33526744 Msa0248800:intron 50.0%
ACTTCTCCCACTTCTTCCCA+TGG + chr2_2:33527519-33527538 None:intergenic 50.0%
TTGGCGTATGCTCGAATCCA+AGG - chr2_2:33527562-33527581 Msa0248800:CDS 50.0%
TGGCGTATGCTCGAATCCAA+GGG - chr2_2:33527563-33527582 Msa0248800:CDS 50.0%
!! TTACGAGGGCATTCTTCCCT+TGG + chr2_2:33527582-33527601 None:intergenic 50.0%
CAGCTTCAGAACCATCTGAG+TGG + chr2_2:33527663-33527682 None:intergenic 50.0%
!! TGGTTCTGAAGCTGCTGATC+AGG - chr2_2:33527669-33527688 Msa0248800:intron 50.0%
TGTCTACGTCTCATTGTCCC+TGG - chr2_2:33527945-33527964 Msa0248800:CDS 50.0%
! CGGTGAATTTTCTGCACAGG+TGG - chr2_2:33528270-33528289 Msa0248800:intron 50.0%
AGGTGGGAGCAAAAGCTGAA+GGG - chr2_2:33528287-33528306 Msa0248800:intron 50.0%
!! AGGGTTGGTGAGACTACATG+AGG - chr2_2:33528409-33528428 Msa0248800:CDS 50.0%
!! GGGTTGGTGAGACTACATGA+GGG - chr2_2:33528410-33528429 Msa0248800:CDS 50.0%
!! GGTTGGTGAGACTACATGAG+GGG - chr2_2:33528411-33528430 Msa0248800:CDS 50.0%
TCCAAGTCCTCAAGGGAACC+AGG + chr2_2:33524193-33524212 None:intergenic 55.0%
TCCACAGGAAAGCCTCAGTG+TGG - chr2_2:33524261-33524280 Msa0248800:intron 55.0%
CCACAGGAAAGCCTCAGTGT+GGG - chr2_2:33524262-33524281 Msa0248800:intron 55.0%
AAGCTTGAACCAAGTCGGCC+TGG - chr2_2:33525247-33525266 Msa0248800:CDS 55.0%
! CAAGTGGGTTCACCTCTAGC+CGG - chr2_2:33525734-33525753 Msa0248800:intron 55.0%
! CGTGGAGCTTTGTCCTCGTT+TGG - chr2_2:33526187-33526206 Msa0248800:intron 55.0%
! GATGGCCTTGACCAAGCTGA+AGG + chr2_2:33526304-33526323 None:intergenic 55.0%
AGCTTGGTCAAGGCCATCTG+TGG - chr2_2:33526306-33526325 Msa0248800:intron 55.0%
GCTTGGTCAAGGCCATCTGT+GGG - chr2_2:33526307-33526326 Msa0248800:intron 55.0%
!! CATGTCGGTTCTGCTCCTTC+AGG - chr2_2:33526430-33526449 Msa0248800:CDS 55.0%
! GGCTATAGAGGCATGGGTCT+AGG - chr2_2:33526520-33526539 Msa0248800:intron 55.0%
CAGGTGGGAGCAAAAGCTGA+AGG - chr2_2:33528286-33528305 Msa0248800:intron 55.0%
CGGTTTGCCTGGTTCCCTTG+AGG - chr2_2:33524183-33524202 Msa0248800:intron 60.0%
GCCTGGTTCCCTTGAGGACT+TGG - chr2_2:33524189-33524208 Msa0248800:intron 60.0%
CCCACACTGAGGCTTTCCTG+TGG + chr2_2:33524265-33524284 None:intergenic 60.0%
CTTGAACCAAGTCGGCCTGG+AGG - chr2_2:33525250-33525269 Msa0248800:CDS 60.0%
GAACCAACCTGGCGGAGAAC+CGG + chr2_2:33525756-33525775 None:intergenic 60.0%
GAAGGCCGCAACTATTGGCC+AGG - chr2_2:33526057-33526076 Msa0248800:intron 60.0%
GCTCCGCCTCCCACACCATT+AGG + chr2_2:33524349-33524368 None:intergenic 65.0%
TGGGAGGCGGAGCTGTTGCT+GGG - chr2_2:33524356-33524375 Msa0248800:intron 65.0%
GCATAGCTGTCCGAGCAGCG+CGG + chr2_2:33524708-33524727 None:intergenic 65.0%
CACTTGCGACGAGCTCCTCC+AGG + chr2_2:33525268-33525287 None:intergenic 65.0%
! TAGCCGGTTCTCCGCCAGGT+TGG - chr2_2:33525750-33525769 Msa0248800:intron 65.0%
GTGGGAGGCGGAGCTGTTGC+TGG - chr2_2:33524355-33524374 Msa0248800:intron 70.0%
GGGAGGCGGAGCTGTTGCTG+GGG - chr2_2:33524357-33524376 Msa0248800:intron 70.0%
CGAGCTCCTCCAGGCCGACT+TGG + chr2_2:33525259-33525278 None:intergenic 70.0%
CCTGGCGGAGAACCGGCTAG+AGG + chr2_2:33525749-33525768 None:intergenic 70.0%
! CCTCTAGCCGGTTCTCCGCC+AGG - chr2_2:33525746-33525765 Msa0248800:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 33523007 33528607 33523007 ID=Msa0248800;Name=Msa0248800
chr2_2 mRNA 33523007 33528607 33523007 ID=Msa0248800-mRNA-1;Parent=Msa0248800;Name=Msa0248800-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.81|0.83|0.91|1|1|12|432|926
chr2_2 exon 33523007 33523573 33523007 ID=Msa0248800-mRNA-1:exon:11264;Parent=Msa0248800-mRNA-1
chr2_2 exon 33523924 33524103 33523924 ID=Msa0248800-mRNA-1:exon:11263;Parent=Msa0248800-mRNA-1
chr2_2 exon 33524271 33524339 33524271 ID=Msa0248800-mRNA-1:exon:11262;Parent=Msa0248800-mRNA-1
chr2_2 exon 33524699 33525705 33524699 ID=Msa0248800-mRNA-1:exon:11261;Parent=Msa0248800-mRNA-1
chr2_2 exon 33525847 33525938 33525847 ID=Msa0248800-mRNA-1:exon:11260;Parent=Msa0248800-mRNA-1
chr2_2 exon 33526330 33526481 33526330 ID=Msa0248800-mRNA-1:exon:11259;Parent=Msa0248800-mRNA-1
chr2_2 exon 33526611 33526727 33526611 ID=Msa0248800-mRNA-1:exon:11258;Parent=Msa0248800-mRNA-1
chr2_2 exon 33526825 33526983 33526825 ID=Msa0248800-mRNA-1:exon:11257;Parent=Msa0248800-mRNA-1
chr2_2 exon 33527143 33527618 33527143 ID=Msa0248800-mRNA-1:exon:11256;Parent=Msa0248800-mRNA-1
chr2_2 exon 33527706 33527849 33527706 ID=Msa0248800-mRNA-1:exon:11255;Parent=Msa0248800-mRNA-1
chr2_2 exon 33527945 33527994 33527945 ID=Msa0248800-mRNA-1:exon:11254;Parent=Msa0248800-mRNA-1
chr2_2 exon 33528408 33528607 33528408 ID=Msa0248800-mRNA-1:exon:11253;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33528408 33528607 33528408 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33527945 33527994 33527945 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33527706 33527849 33527706 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33527143 33527618 33527143 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33526825 33526983 33526825 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33526611 33526727 33526611 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33526330 33526481 33526330 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33525847 33525938 33525847 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33524699 33525705 33524699 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33524271 33524339 33524271 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33523924 33524103 33523924 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 CDS 33523439 33523573 33523439 ID=Msa0248800-mRNA-1:cds;Parent=Msa0248800-mRNA-1
chr2_2 three_prime_UTR 33523007 33523438 33523007 ID=Msa0248800-mRNA-1:three_prime_utr;Parent=Msa0248800-mRNA-1
Gene Sequence

>Msa0248800

ATGGAATTGTTCTTAACCATTGCCTGGAACACCAATTATTCACATACCTATGACTGTGATAATATTGCTCATACATATCTGAAATTTGTTTTATATCCACATAACATTTCACTGCAAAGCTCAGATGCGTATGTTTTAACATCTGATGAATTTGGTTTAACATCTGATGAATTTGGTCGTGAAACTGAGAACGTTGCTAGAGGGCAGAAAGGTGATGCAATGAGGCAGTCTTTTGATCCTTCATTTTTCGGTCCTTCCAAGATTCCACCTATAAACACAGCTGGAAAATCAAGGCATGGTGCGTTGGAAGTTTCATCTGGATCTGATTCATTCCATGCTTCATCTGATGCCAGTCTCTTTTCTAGCTCATTACCTGTTCTTCCACATGAAAAGTTGAACTTAAATGAAACTGAAAATGGTTTTCAATCGGTTGATGACATCTCAACTAACTTCAAAAAGCATCATCAAGAGGCAGAGCTTAATGATTCCCTTGACGATGGTAATAATCACACAAACGGAACCATGCTTCCTGATGATGACGAAGAGCTTTTGGCTGGCATAATGGATGATTTTGACTTAAGCGGTTTGCCTGGTTCCCTTGAGGACTTGGAAGAGTATGATCTTTTTGATAGTAGTGGAGGTTTGGAACTAGAAACGGATCCACAGGAAAGCCTCAGTGTGGGTATATCTAAGTTAAGCTTTTCTGATAGCTCTGTTGGAAATAGTATGCCCCCTTATTCTTTACCTAATGGTGTGGGAGGCGGAGCTGTTGCTGGGGAACATCCATATGGAGAGCATCCTTCTCGAACATTGTTTGTTCGAAATATTAACAGTAATGTGGAGGATACAGAGCTGCGGACTCTTTTTGAGCAATATGGTGATATTAGAACCCTATATACTGCATGTAAACACAGGGGGTTTGTAATGATATCATATTATGACATCCGCGCTGCTCGGACAGCTATGCGTGCATTGCAAAATAAACCTTTGCGGCGAAGGAAACTTGACATTCACTTTTCAATACCAAAGGATAATCCATCAGACAAAGATATCAATCAAGGAACCTTGGTAGTTTTCAATTTGGATCCATCAGTTTCAAATGAAGACCTCCGCCAAATATTTGGGGCTTATGGAGAGGTCAAAGAGATAAGGGAAACTCCTCACAAGAGGCATCATAAGTTTATTGAATACTATGATGTAAGAGCTGCAGAAGCAGCACTTAAATCATTAAATAGGAGTGACATAGCTGGTAAACGCATAAAGCTTGAACCAAGTCGGCCTGGAGGAGCTCGTCGCAATTTGATGCTCCAACTGAATCAAGAGCTTGACCAAGATGAGTCTCGAAGTTTTCGATATCAAGTGGGTTCACCTCTAGCCGGTTCTCCGCCAGGTAATTGGTTACAGTTCAACAGTCCTATTGAGCAGAGTTCATTGACAAATATAAATCATTCTCCTGGTTCCAAAATAATGAGCCCAACAACCAGCAACCATTTACCGGGATTAGCTTCAATTTTGCAACCACAGTTGTCGAACACAGTGAAGGCCGCAACTATTGGCCAGGACATAGGAAGGAGTAGTCATGGAGACCACATATTTCCCAATAAAATTTCATCCGCTAGATCTAATTTCAACTCACATTCACTTCCAGAGCCAAAATTTAGTTCATATCGTGGAGCTTTGTCCTCGTTTGGTGCATCAACCTCAAATGGGTCGTCAGTGGAAACCTTGACCGCTCCACAGTTTCTATGGGGAAGTCCAAACTTATCCTCAGAGCCAACCAAACCTTCAGCTTGGTCAAGGCCATCTGTGGGACATCAACTTAGTACATCAAATGGAACGAGTCATGCTTTCCCGTACTCAAGTCAGAACAATTCCTTTGTCAGTTCATCTCAGCAGCAACATCATCATCATCATGTCGGTTCTGCTCCTTCAGGTTTGCCTTTTGAAAGGCACTTCGGTTTTTTCCCCAAGTCATCTGAAACTTCATTGATGAATAATGTTGGCTATAGAGGCATGGGTCTAGGGCACAATGATGGAAATTACATGCTTAATAGTGGCATTTCTGGTAATGTTGGCGTTTCTATTCCAAGAAATATGCCTGACAATGGTTCATCAAACTTCCGAATGAGATCTTCTATACTTAGCCCTGTATTTTTAGGTAATGGTCCTTATCCAGGACTACTACCTACTGCTATGGAGAGTTTTACTGACCGTGTTAGGAGTAGATGGATCGACAACAATGGAAGCCAAGTTGACAACAAGAAGCTATTTCAGCTCGACTTAGATAAGATTAGGAGTGGTGAAGATACAAGGACTACGCTGATGATAAAGAATATCCCAAATAAGTATGAACGATTATGTCTAAGCAATGCTTGTTTATTATTAACAATTAACAATAATAAATGCAACGTCGGTTATGCATTTATCAACATGTTGTCACCATCACTTATTATTCCATTCTACGAGACATTCCATGGGAAGAAGTGGGAGAAGTTTAATAGTGAAAAAGTTGCTTCTTTGGCGTATGCTCGAATCCAAGGGAAGAATGCCCTCGTAAACCATTTCCAAAATTCAAGTTTGATGAACGAAGATAAACGCTGCCGACCTATTGTCTTCCACTCAGATGGTTCTGAAGCTGCTGATCAGATCATACAAGAGCATCTCCCCTCCAACTCCAACAATATGTATATTCAGGCAGTTAAGTCAAGCGAGTTACAATTAAGCGATTCCTCTGGCTACTTTCCAAAGGATGGTCCTTTTATGAGTTTGGATGCCAATTAA
Protein sequence

>Msa0248800

MELFLTIAWNTNYSHTYDCDNIAHTYLKFVLYPHNISLQSSDAYVLTSDEFGLTSDEFGRETENVARGQKGDAMRQSFDPSFFGPSKIPPINTAGKSRHGALEVSSGSDSFHASSDASLFSSSLPVLPHEKLNLNETENGFQSVDDISTNFKKHHQEAELNDSLDDGNNHTNGTMLPDDDEELLAGIMDDFDLSGLPGSLEDLEEYDLFDSSGGLELETDPQESLSVGISKLSFSDSSVGNSMPPYSLPNGVGGGAVAGEHPYGEHPSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELDQDESRSFRYQVGSPLAGSPPGNWLQFNSPIEQSSLTNINHSPGSKIMSPTTSNHLPGLASILQPQLSNTVKAATIGQDIGRSSHGDHIFPNKISSARSNFNSHSLPEPKFSSYRGALSSFGASTSNGSSVETLTAPQFLWGSPNLSSEPTKPSAWSRPSVGHQLSTSNGTSHAFPYSSQNNSFVSSSQQQHHHHHVGSAPSGLPFERHFGFFPKSSETSLMNNVGYRGMGLGHNDGNYMLNSGISGNVGVSIPRNMPDNGSSNFRMRSSILSPVFLGNGPYPGLLPTAMESFTDRVRSRWIDNNGSQVDNKKLFQLDLDKIRSGEDTRTTLMIKNIPNKYERLCLSNACLLLTINNNKCNVGYAFINMLSPSLIIPFYETFHGKKWEKFNSEKVASLAYARIQGKNALVNHFQNSSLMNEDKRCRPIVFHSDGSEAADQIIQEHLPSNSNNMYIQAVKSSELQLSDSSGYFPKDGPFMSLDAN*