AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0249840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249840 MtrunA17_Chr2g0295891 94.444 468 21 2 1 468 1 463 0.0 877
Msa0249840 MtrunA17_Chr4g0067411 57.916 499 165 13 3 468 4 490 0.0 536
Msa0249840 MtrunA17_Chr8g0365341 28.788 198 109 10 266 438 311 501 2.25e-17 85.1
Msa0249840 MtrunA17_Chr3g0132991 30.332 211 111 9 266 447 395 598 6.25e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249840 AT4G15880.1 51.303 499 202 14 1 468 1 489 5.00e-164 472
Msa0249840 AT3G06910.1 48.052 462 202 11 32 468 54 502 4.88e-134 396
Msa0249840 AT4G15880.2 47.857 420 178 14 1 389 1 410 1.23e-114 343
Msa0249840 AT4G00690.1 64.286 238 82 3 233 468 105 341 3.40e-110 330
Msa0249840 AT1G10570.3 30.043 233 119 11 233 432 165 386 1.62e-20 94.4
Msa0249840 AT1G10570.1 30.472 233 118 12 233 432 296 517 2.52e-20 94.4
Msa0249840 AT1G10570.2 30.043 233 119 11 233 432 295 516 2.77e-20 94.4
Msa0249840 AT1G60220.1 32.143 196 96 9 266 432 343 530 6.80e-19 90.1
Msa0249840 AT4G33620.1 29.130 230 124 8 262 464 301 518 2.48e-12 69.7
Msa0249840 AT1G09730.2 27.885 208 120 8 266 447 394 597 3.91e-12 69.3
Msa0249840 AT1G09730.1 27.885 208 120 8 266 447 426 629 5.33e-12 68.9

Find 171 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAAAATTTATTCAAAATT+AGG 0.132086 2_2:-37603716 None:intergenic
CGTCATCAGCATAGAAATTT+TGG 0.179780 2_2:+37603326 Msa0249840:three_prime_UTR
AGAACGAGCATGTCCAATTT+AGG 0.194029 2_2:-37598350 None:intergenic
GGTGGATTGGTATGAAAATT+TGG 0.196620 2_2:-37598485 None:intergenic
AGGAATTGGGGTTTGGTGTC+TGG 0.216416 2_2:-37598556 None:intergenic
CATGTCCAATTTAGGGATTT+AGG 0.221102 2_2:-37598342 None:intergenic
GACCTTCCTGAGCAGGAAAA+TGG 0.235361 2_2:+37602035 Msa0249840:CDS
AAAACCCTAAATCCCTAAAT+TGG 0.264645 2_2:+37598337 Msa0249840:five_prime_UTR
ATGGACGACTCAAAGGAAAT+TGG 0.270929 2_2:+37600887 Msa0249840:CDS
ATGACATTTCAGAAACTTCT+TGG 0.270951 2_2:-37600075 None:intergenic
GGAGAAGGTGGTGATTGATT+TGG 0.282114 2_2:+37598741 Msa0249840:CDS
CGTGAACTTCACGGAGGAAT+TGG 0.283636 2_2:-37598570 None:intergenic
ATGTCCAATTTAGGGATTTA+GGG 0.296762 2_2:-37598341 None:intergenic
TTACTTTATCACAATCAAAT+AGG 0.308990 2_2:-37600917 None:intergenic
TGCATTCTTCAGAGCGTTTA+CGG 0.318121 2_2:-37598405 None:intergenic
TGTGTATAAGAAGTTGCTTC+AGG 0.324997 2_2:+37598936 Msa0249840:CDS
GAGATGAAGGATGTTGAAAT+TGG 0.330285 2_2:+37598826 Msa0249840:CDS
GAACGAGCATGTCCAATTTA+GGG 0.345433 2_2:-37598349 None:intergenic
CCAAGCACCAGTGAATTTCT+TGG 0.356823 2_2:-37601045 None:intergenic
AGGATCTTCACTTATGGAAT+TGG 0.357387 2_2:+37603365 Msa0249840:three_prime_UTR
TGATGGAGGATCTTCACTTA+TGG 0.361565 2_2:+37603359 Msa0249840:three_prime_UTR
GTGAACTTCACGGAGGAATT+GGG 0.363077 2_2:-37598569 None:intergenic
GGGTTTGGTGTCTGGGTAAC+GGG 0.366240 2_2:-37598548 None:intergenic
GGGGAGGATTCGGATGATTC+TGG 0.366913 2_2:+37598772 Msa0249840:CDS
AAGGCGAAGCGTTCGGCGTT+GGG 0.367148 2_2:+37598694 Msa0249840:CDS
TCGTTCTTCGTTTCAATCAA+TGG 0.377657 2_2:+37598366 Msa0249840:exon
GTCATCGGGTTCGCCGGATT+CGG 0.378768 2_2:+37598861 Msa0249840:CDS
GTGGATTGGTATGAAAATTT+GGG 0.380610 2_2:-37598484 None:intergenic
GGATTCAGATGGGGAGGATT+CGG 0.383737 2_2:+37598762 Msa0249840:CDS
GTTCTGCAGGAGGAAGATAT+TGG 0.389341 2_2:+37599793 Msa0249840:intron
CTTTCAATGAGTCAAGATAC+TGG 0.389721 2_2:-37601096 None:intergenic
TGTTCTTCATCATCTGTTAG+AGG 0.391081 2_2:-37599669 None:intergenic
GAAAAGAATGGTGATTTCAT+TGG 0.391673 2_2:+37603652 Msa0249840:three_prime_UTR
TCCTTTGAGTCGTCCATCTT+CGG 0.393658 2_2:-37600881 None:intergenic
CGTTCTTCGTTTCAATCAAT+GGG 0.395068 2_2:+37598367 Msa0249840:exon
GGAATTGGGGTTTGGTGTCT+GGG 0.399366 2_2:-37598555 None:intergenic
TTCACGGAGGAATTGGGGTT+TGG 0.407189 2_2:-37598563 None:intergenic
GACGAAGTAAAAGACAAAAC+TGG 0.409586 2_2:+37601969 Msa0249840:CDS
ACCTCAACAAGTTCCTTCTT+AGG 0.422611 2_2:-37599048 None:intergenic
CTATGCTGATGACGGAGTAT+TGG 0.423126 2_2:-37603317 None:intergenic
GCTGTCCTGCGCCGGAAGTA+AGG 0.427326 2_2:-37603231 None:intergenic
AGGAACACATGCCTTACTTC+CGG 0.430046 2_2:+37603220 Msa0249840:intron
GGGGTTTGGTGTCTGGGTAA+CGG 0.430866 2_2:-37598549 None:intergenic
TCAATTGTTAAGGCCTAAGA+AGG 0.433149 2_2:+37599035 Msa0249840:CDS
CCCTCAATTTCCTTGAACAA+AGG 0.433697 2_2:-37603625 None:intergenic
TGACATTTCAGAAACTTCTT+GGG 0.443127 2_2:-37600074 None:intergenic
GGAGTTCAACGGCGGTCATC+GGG 0.444100 2_2:+37598847 Msa0249840:CDS
GTTTGAGGTGGAAACGGGTC+GGG 0.451346 2_2:-37598506 None:intergenic
TCCTTTGTTCAAGGAAATTG+AGG 0.452997 2_2:+37603624 Msa0249840:three_prime_UTR
AAAGATGCGGTGCCTTCTCC+CGG 0.455689 2_2:+37599853 Msa0249840:CDS
GTGATTGATTTGGATTCAGA+TGG 0.455759 2_2:+37598751 Msa0249840:CDS
GGCGTTGGGGAAATGTAGAT+TGG 0.457174 2_2:+37598708 Msa0249840:CDS
ACCTTCCTGAGCAGGAAAAT+GGG 0.458199 2_2:+37602036 Msa0249840:CDS
TGGACGACTCAAAGGAAATT+GGG 0.459299 2_2:+37600888 Msa0249840:CDS
TGGAAACGGGTCGGGTGGAT+TGG 0.461772 2_2:-37598498 None:intergenic
GACTTCTATAGCAGAGGCCT+GGG 0.461794 2_2:+37602798 Msa0249840:CDS
CGACTTCTATAGCAGAGGCC+TGG 0.463003 2_2:+37602797 Msa0249840:CDS
AAAGGCGAAGCGTTCGGCGT+TGG 0.466252 2_2:+37598693 Msa0249840:CDS
TGGAGTTCAACGGCGGTCAT+CGG 0.468066 2_2:+37598846 Msa0249840:CDS
TTATGAAAAGGCGAAGCGTT+CGG 0.469112 2_2:+37598687 Msa0249840:CDS
GTGAATTTGAATTTGATTGT+TGG 0.469453 2_2:-37598297 None:intergenic
AGAGGGACAAAAGGCTCAAA+TGG 0.470575 2_2:-37599651 None:intergenic
ATTGGCAGTTAATAAGTGGC+AGG 0.470755 2_2:+37600835 Msa0249840:intron
TGAATTTGAATTTGATTGTT+GGG 0.471145 2_2:-37598296 None:intergenic
TCTAACAGATGATGAAGAAC+AGG 0.472011 2_2:+37599671 Msa0249840:CDS
GCATTAGTCAAAGCCGAATC+CGG 0.472036 2_2:-37598874 None:intergenic
CCAGTGAATTTCTTGGTGGA+TGG 0.476301 2_2:-37601038 None:intergenic
TCTAGAAACGATGGCGTTTG+AGG 0.478348 2_2:-37598521 None:intergenic
TTGGTAGTGTTGAGCTTAGT+CGG 0.482569 2_2:+37603581 Msa0249840:three_prime_UTR
GTTAATTGGCAGTTAATAAG+TGG 0.486888 2_2:+37600831 Msa0249840:intron
AGTTCTAATATTGAGGTGTC+AGG 0.489874 2_2:+37599827 Msa0249840:CDS
ATGGCGTTTGAGGTGGAAAC+GGG 0.496263 2_2:-37598511 None:intergenic
TGTCGAAGACCTTCCTGAGC+AGG 0.498141 2_2:+37602028 Msa0249840:CDS
TTTGAATTTGATTGTTGGGT+AGG 0.498274 2_2:-37598292 None:intergenic
AGTATTTGTTCCTTTGTTCA+AGG 0.499089 2_2:+37603615 Msa0249840:three_prime_UTR
GATGGCGTTTGAGGTGGAAA+CGG 0.501181 2_2:-37598512 None:intergenic
CATGAACACTTGAAAGATCA+TGG 0.501998 2_2:-37598915 None:intergenic
ACGGCGGTCATCGGGTTCGC+CGG 0.502399 2_2:+37598855 Msa0249840:CDS
GGTGCCTTCTCCCGGGTGCA+TGG 0.503021 2_2:+37599861 Msa0249840:CDS
TGATTTGGATTCAGATGGGG+AGG 0.505907 2_2:+37598756 Msa0249840:CDS
ATTACAAATCTGTCCGAAGA+TGG 0.506348 2_2:+37600868 Msa0249840:CDS
TCATTGGTAATGATTGTGGC+AGG 0.509247 2_2:+37603668 Msa0249840:three_prime_UTR
GGTTGTTGAGATTCGTGATA+CGG 0.510063 2_2:+37598804 Msa0249840:CDS
TCATCTGTTAGAGGGACAAA+AGG 0.510379 2_2:-37599660 None:intergenic
TTGAGCTTAGTCGGTTTGCT+CGG 0.510832 2_2:+37603590 Msa0249840:three_prime_UTR
TCATGAGAGTTCTAATATTG+AGG 0.511257 2_2:+37599820 Msa0249840:CDS
ATTTGATTGTTGGGTAGGAA+AGG 0.512254 2_2:-37598287 None:intergenic
TACAGGGCGCGTGAACTTCA+CGG 0.513088 2_2:-37598579 None:intergenic
CAGTGAATTTCTTGGTGGAT+GGG 0.515110 2_2:-37601037 None:intergenic
TTCGACATATTCTTTCTCCC+AGG 0.518066 2_2:-37602012 None:intergenic
GTGTATAAGAAGTTGCTTCA+GGG 0.519857 2_2:+37598937 Msa0249840:CDS
ACACATATGCCCCGGTGTCT+AGG 0.520679 2_2:+37603419 Msa0249840:three_prime_UTR
CGTTTGAGGTGGAAACGGGT+CGG 0.522844 2_2:-37598507 None:intergenic
TGCTTCAGGGTGTTCAGAGA+AGG 0.524599 2_2:+37598950 Msa0249840:CDS
CAGTTAATAAGTGGCAGGGA+TGG 0.525028 2_2:+37600840 Msa0249840:intron
CCAAGAAATTCACTGGTGCT+TGG 0.526399 2_2:+37601045 Msa0249840:CDS
CCTTTGTTCAAGGAAATTGA+GGG 0.527958 2_2:+37603625 Msa0249840:three_prime_UTR
TCGATAGTTTAGAACGCAGT+AGG 0.529783 2_2:+37603451 Msa0249840:three_prime_UTR
CCTCCTTGGCTGTCCTGCGC+CGG 0.533561 2_2:-37603239 None:intergenic
TGAACTATTAGATGAGGATG+AGG 0.538117 2_2:+37603496 Msa0249840:three_prime_UTR
ACATGCCTTACTTCCGGCGC+AGG 0.538875 2_2:+37603226 Msa0249840:CDS
TGAGGTGGAAACGGGTCGGG+TGG 0.538998 2_2:-37598503 None:intergenic
TCTTGACTCATTGAAAGGAA+TGG 0.539397 2_2:+37601102 Msa0249840:CDS
ATGAGGTTTCAACTATGTAA+TGG 0.539844 2_2:+37603513 Msa0249840:three_prime_UTR
GATTCGTGATACGGAGATGA+AGG 0.540593 2_2:+37598813 Msa0249840:CDS
CAGTATCTTGACTCATTGAA+AGG 0.543690 2_2:+37601097 Msa0249840:CDS
CCATCCACCAAGAAATTCAC+TGG 0.546950 2_2:+37601038 Msa0249840:CDS
TCTCAATCTCAATACCTCCT+TGG 0.547984 2_2:-37603253 None:intergenic
CATCAAATCATACCGGTTGG+AGG 0.548310 2_2:-37599712 None:intergenic
TTCGGATGATTCTGGTGTTG+TGG 0.550785 2_2:+37598780 Msa0249840:CDS
TGAATAGAAAGAGAATAGAG+AGG 0.550981 2_2:-37603547 None:intergenic
AAGATATTGATGTAAGCACC+TGG 0.558060 2_2:+37601994 Msa0249840:CDS
GATTTCATTGGTAATGATTG+TGG 0.561251 2_2:+37603664 Msa0249840:three_prime_UTR
AGAGCGTTTACGGTTGCTTG+TGG 0.562242 2_2:-37598395 None:intergenic
TGATTGATTTGGATTCAGAT+GGG 0.563741 2_2:+37598752 Msa0249840:CDS
CAAAATTTCTATGCTGATGA+CGG 0.564415 2_2:-37603325 None:intergenic
CTGATGACGGAGTATTGGAC+TGG 0.564929 2_2:-37603312 None:intergenic
GTTCTTCATCATCTGTTAGA+GGG 0.565156 2_2:-37599668 None:intergenic
TCCGAAGATGGACGACTCAA+AGG 0.566691 2_2:+37600880 Msa0249840:CDS
TGAACTTCACGGAGGAATTG+GGG 0.568215 2_2:-37598568 None:intergenic
GCCTAAGAAGGAACTTGTTG+AGG 0.573966 2_2:+37599047 Msa0249840:CDS
CTTCCGGCGCAGGACAGCCA+AGG 0.574731 2_2:+37603236 Msa0249840:CDS
AAGATGCGGTGCCTTCTCCC+GGG 0.577145 2_2:+37599854 Msa0249840:CDS
TTAACCATGCACCCGGGAGA+AGG 0.578419 2_2:-37599865 None:intergenic
TTGAGAGCTGACTAAGCAAA+GGG 0.580442 2_2:+37603270 Msa0249840:exon
ATTGAGGGGAAAGAAAAGAA+TGG 0.582208 2_2:+37603640 Msa0249840:three_prime_UTR
AGGCGAAGCGTTCGGCGTTG+GGG 0.585062 2_2:+37598695 Msa0249840:CDS
ACGCGTTGTACCTAGACACC+GGG 0.585409 2_2:-37603429 None:intergenic
CTTTGTTCAAGGAAATTGAG+GGG 0.587615 2_2:+37603626 Msa0249840:three_prime_UTR
ATGTAGATTGGTGACACAGA+AGG 0.588247 2_2:+37598720 Msa0249840:CDS
GATTGATTTGGATTCAGATG+GGG 0.589369 2_2:+37598753 Msa0249840:CDS
TCATCATTTAACCATGCACC+CGG 0.591177 2_2:-37599872 None:intergenic
GACTAATGCGGTGGTGAATG+TGG 0.591893 2_2:+37598888 Msa0249840:CDS
CTACTGAACAGGTTTGATTG+CGG 0.594322 2_2:+37602753 Msa0249840:intron
TTCGGCTTTGACTAATGCGG+TGG 0.594690 2_2:+37598879 Msa0249840:CDS
AACTGACTACACATATGCCC+CGG 0.595034 2_2:+37603411 Msa0249840:three_prime_UTR
ATTGAGAGCTGACTAAGCAA+AGG 0.598377 2_2:+37603269 Msa0249840:exon
AGAAACGATGGCGTTTGAGG+TGG 0.601462 2_2:-37598518 None:intergenic
ACCTCGAGTTGCTGAAAGAG+AGG 0.601982 2_2:+37600039 Msa0249840:CDS
CCCTCTCTTTCAGCAACTCG+AGG 0.603191 2_2:-37600040 None:intergenic
AGGCTCTACAATTTGAGCAA+TGG 0.603506 2_2:+37603688 Msa0249840:three_prime_UTR
TTGGCAGTTAATAAGTGGCA+GGG 0.605074 2_2:+37600836 Msa0249840:intron
AGCACCAGTGAATTTCTTGG+TGG 0.607233 2_2:-37601042 None:intergenic
TAGCCGTGTGCTAAAAGTGC+TGG 0.608533 2_2:+37601126 Msa0249840:CDS
TTGGTAGCAGTAGTTGATGG+AGG 0.609116 2_2:+37603345 Msa0249840:three_prime_UTR
CAGGCCTCTGCTATAGAAGT+CGG 0.610776 2_2:-37602796 None:intergenic
GGGTGCATGGTTAAATGATG+AGG 0.610991 2_2:+37599874 Msa0249840:CDS
CAAAAGTGAACTATTAGATG+AGG 0.614394 2_2:+37603490 Msa0249840:three_prime_UTR
TGGTTGAGAAATAGAGATGG+TGG 0.626211 2_2:-37598449 None:intergenic
GGATGATTCTGGTGTTGTGG+AGG 0.631804 2_2:+37598783 Msa0249840:CDS
CCTCGAGTTGCTGAAAGAGA+GGG 0.634700 2_2:+37600040 Msa0249840:CDS
AACAGATGATGAAGAACAGG+AGG 0.637201 2_2:+37599674 Msa0249840:CDS
ATGTTGAAATTGGAGTTCAA+CGG 0.644020 2_2:+37598836 Msa0249840:CDS
AGATGGTGGTGTGATTGTTG+AGG 0.648258 2_2:-37598435 None:intergenic
CCGGCGCAGGACAGCCAAGG+AGG 0.650724 2_2:+37603239 Msa0249840:CDS
CCTGGTTAAAACACAGACCC+AGG 0.650902 2_2:-37602815 None:intergenic
ATTGGTGACACAGAAGGAGA+AGG 0.654383 2_2:+37598726 Msa0249840:CDS
GGTGACACAGAAGGAGAAGG+TGG 0.661441 2_2:+37598729 Msa0249840:CDS
TGATGACGGAGTATTGGACT+GGG 0.668342 2_2:-37603311 None:intergenic
AGATATTGATGTAAGCACCT+GGG 0.669174 2_2:+37601995 Msa0249840:CDS
AGATGGTTGAGAAATAGAGA+TGG 0.676316 2_2:-37598452 None:intergenic
TTGAAATTGGAGTTCAACGG+CGG 0.677101 2_2:+37598839 Msa0249840:CDS
GACGCGTTGTACCTAGACAC+CGG 0.677695 2_2:-37603430 None:intergenic
ACGGGAGAGTCTAGAAACGA+TGG 0.683103 2_2:-37598530 None:intergenic
GGATTCGGCTTTGACTAATG+CGG 0.689911 2_2:+37598876 Msa0249840:CDS
AGGTGTCAGGAGAAAAGATG+CGG 0.692226 2_2:+37599840 Msa0249840:CDS
CATCATTTAACCATGCACCC+GGG 0.692695 2_2:-37599871 None:intergenic
TATGCCGACTTCTATAGCAG+AGG 0.698945 2_2:+37602792 Msa0249840:CDS
GGTGGTGTGATTGTTGAGGA+CGG 0.715231 2_2:-37598431 None:intergenic
CGCGTTGTACCTAGACACCG+GGG 0.816412 2_2:-37603428 None:intergenic
AGGGCGCGTGAACTTCACGG+AGG 0.817111 2_2:-37598576 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATGTATAACTAAAATAA+CGG + chr2_2:37600687-37600706 Msa0249840:intron 10.0%
!!! TTAAATTCTTTTCTATATTA+AGG + chr2_2:37600715-37600734 Msa0249840:intron 10.0%
!!! TTTTTATTTTGAATGTTAAT+TGG + chr2_2:37600817-37600836 Msa0249840:intron 10.0%
!!! TTTTTTAGCATAAACATTTT+TGG + chr2_2:37599081-37599100 Msa0249840:intron 15.0%
!! TGGACAAAAATTTATTAATA+TGG + chr2_2:37600343-37600362 Msa0249840:intron 15.0%
!! TTTATAAATTAAAAAGTCAC+TGG + chr2_2:37601748-37601767 Msa0249840:intron 15.0%
!! AACTTCAATATACAATTTAA+AGG - chr2_2:37601795-37601814 None:intergenic 15.0%
!!! AAAATATTGAATGGATTAAA+CGG - chr2_2:37603002-37603021 None:intergenic 15.0%
!!! TTTAATCCATTCAATATTTT+TGG + chr2_2:37603002-37603021 Msa0249840:intron 15.0%
!!! TTAATCCATTCAATATTTTT+GGG + chr2_2:37603003-37603022 Msa0249840:intron 15.0%
!! TGAATTTGAATTTGATTGTT+GGG - chr2_2:37598299-37598318 None:intergenic 20.0%
!!! CTTGAAAAGTTGAATTTTTT+AGG - chr2_2:37598607-37598626 None:intergenic 20.0%
!!! TTTTCTTAGTTTGAAGTTTT+AGG + chr2_2:37599307-37599326 Msa0249840:intron 20.0%
!! TTACTGATGAACTATAATTA+TGG + chr2_2:37599412-37599431 Msa0249840:intron 20.0%
!! TTGATGAAAACGTAAATTAT+AGG + chr2_2:37599486-37599505 Msa0249840:intron 20.0%
!! GTAACATTTAATAGTGTATT+AGG + chr2_2:37599508-37599527 Msa0249840:intron 20.0%
!! ATCATGATATAATTAAGTGA+AGG - chr2_2:37599954-37599973 None:intergenic 20.0%
!! ACAAGTTATTAAAACATCAA+AGG - chr2_2:37600300-37600319 None:intergenic 20.0%
!! AATGAAAGAAGATAAATTGT+AGG - chr2_2:37600427-37600446 None:intergenic 20.0%
!! TGTACAAAATGGTTAAATTA+CGG - chr2_2:37600786-37600805 None:intergenic 20.0%
!! TTACTTTATCACAATCAAAT+AGG - chr2_2:37600920-37600939 None:intergenic 20.0%
!! AATGTTAAAACAACTTCAAT+TGG - chr2_2:37600981-37601000 None:intergenic 20.0%
!! ATATTTAAGTAAACAACCAA+GGG + chr2_2:37601707-37601726 Msa0249840:intron 20.0%
!!! AATAGTTAATAAGGTTAGTT+TGG - chr2_2:37602328-37602347 None:intergenic 20.0%
!! AAACTAACCTTATTAACTAT+TGG + chr2_2:37602327-37602346 Msa0249840:intron 20.0%
!! TATTAAACATCAATGAACTA+TGG - chr2_2:37602367-37602386 None:intergenic 20.0%
!! TAATTATTGATGTTAAGACA+CGG + chr2_2:37602429-37602448 Msa0249840:intron 20.0%
!!! ATATGAAGCATTTCATTTTT+TGG + chr2_2:37602842-37602861 Msa0249840:intron 20.0%
!!! ATTCGATTGTTTAAAATCTA+TGG + chr2_2:37603060-37603079 Msa0249840:intron 20.0%
!!! TATTTTGTAAACTTGTTTGA+AGG + chr2_2:37603735-37603754 Msa0249840:three_prime_UTR 20.0%
!!! ATTTTGTAAACTTGTTTGAA+GGG + chr2_2:37603736-37603755 Msa0249840:three_prime_UTR 20.0%
! GTGAATTTGAATTTGATTGT+TGG - chr2_2:37598300-37598319 None:intergenic 25.0%
!!! TTGAATTTTTTAGGTCTACA+GGG - chr2_2:37598598-37598617 None:intergenic 25.0%
! ATTACCCATGAAAAAATCAA+CGG - chr2_2:37598653-37598672 None:intergenic 25.0%
!! TTTTACGAGGAATTATGAAA+AGG + chr2_2:37598675-37598694 Msa0249840:CDS 25.0%
!! GAGATACTTTTCAATTGTTA+AGG + chr2_2:37599025-37599044 Msa0249840:CDS 25.0%
! GTATTATTTAGTAGTAGTAG+TGG + chr2_2:37599114-37599133 Msa0249840:intron 25.0%
!! TTGAGGAAGATTTTAAATTG+TGG + chr2_2:37599344-37599363 Msa0249840:intron 25.0%
! CTATAATTATGGTTTAGATG+CGG + chr2_2:37599423-37599442 Msa0249840:intron 25.0%
!!! TAGACCCAAATTTTAATTAC+TGG + chr2_2:37599549-37599568 Msa0249840:intron 25.0%
! AGCACCAGTAATTAAAATTT+GGG - chr2_2:37599556-37599575 None:intergenic 25.0%
! AAGCACCAGTAATTAAAATT+TGG - chr2_2:37599557-37599576 None:intergenic 25.0%
! GTTTATTCTGAATGTTATGT+TGG + chr2_2:37599595-37599614 Msa0249840:intron 25.0%
! TTCACATATTTATGTAGTGT+TGG + chr2_2:37600138-37600157 Msa0249840:intron 25.0%
! AACATCAAAGGATTACTATA+TGG - chr2_2:37600288-37600307 None:intergenic 25.0%
!! ATCACAGAATTATCTTTTCA+AGG + chr2_2:37600639-37600658 Msa0249840:intron 25.0%
! GAATCAATATCTGTACAAAA+TGG - chr2_2:37600797-37600816 None:intergenic 25.0%
!! ATTTCATTTTCAAATCTGCA+TGG + chr2_2:37601181-37601200 Msa0249840:intron 25.0%
! AACAAAACTATTCAGTTTGA+TGG + chr2_2:37601359-37601378 Msa0249840:intron 25.0%
! ACAAAACTATTCAGTTTGAT+GGG + chr2_2:37601360-37601379 Msa0249840:intron 25.0%
! CATATTTAAGTAAACAACCA+AGG + chr2_2:37601706-37601725 Msa0249840:intron 25.0%
!! TTCTATTTCTTTAATTCCCT+TGG - chr2_2:37601726-37601745 None:intergenic 25.0%
!!! GATGTACATGTTTTAACATT+TGG + chr2_2:37601888-37601907 Msa0249840:intron 25.0%
! AGATATCTGCAATGAAAAAT+TGG + chr2_2:37602139-37602158 Msa0249840:intron 25.0%
!!! TTTTCTTAATTTGTGTGAAC+AGG - chr2_2:37602271-37602290 None:intergenic 25.0%
! GAATACACCAATAGTTAATA+AGG - chr2_2:37602337-37602356 None:intergenic 25.0%
! ACATCAATAATTATTACCGA+TGG - chr2_2:37602422-37602441 None:intergenic 25.0%
!! GAATAACTCTAATTTGAGTT+TGG + chr2_2:37602570-37602589 Msa0249840:intron 25.0%
! TAATAAATCCTGAAAAGATG+GGG - chr2_2:37602697-37602716 None:intergenic 25.0%
! GTAATAAATCCTGAAAAGAT+GGG - chr2_2:37602698-37602717 None:intergenic 25.0%
! TGTAATAAATCCTGAAAAGA+TGG - chr2_2:37602699-37602718 None:intergenic 25.0%
!!! TCGTTTTTGTTCAACTAAAA+TGG - chr2_2:37602937-37602956 None:intergenic 25.0%
!! ATTGAAGTATTTCAAGCAAT+TGG - chr2_2:37602963-37602982 None:intergenic 25.0%
!! TTTTGCCCAAAAATATTGAA+TGG - chr2_2:37603011-37603030 None:intergenic 25.0%
!!! CGAATATTTCTAGCAATTAA+AGG - chr2_2:37603045-37603064 None:intergenic 25.0%
!!! CAATGGTATTGGTTTAATTT+TGG - chr2_2:37603111-37603130 None:intergenic 25.0%
! AAACTTCTCTTTCCATTTAT+AGG + chr2_2:37603200-37603219 Msa0249840:intron 25.0%
!!! TCTATTCAGTTTTGTATTGT+TGG + chr2_2:37603562-37603581 Msa0249840:three_prime_UTR 25.0%
TTTGAATTTGATTGTTGGGT+AGG - chr2_2:37598295-37598314 None:intergenic 30.0%
AAAACCCTAAATCCCTAAAT+TGG + chr2_2:37598337-37598356 Msa0249840:five_prime_UTR 30.0%
ATGTCCAATTTAGGGATTTA+GGG - chr2_2:37598344-37598363 None:intergenic 30.0%
!! GTGGATTGGTATGAAAATTT+GGG - chr2_2:37598487-37598506 None:intergenic 30.0%
!!! GTTGAATTTTTTAGGTCTAC+AGG - chr2_2:37598599-37598618 None:intergenic 30.0%
!!! GATTCCGTTGATTTTTTCAT+GGG + chr2_2:37598646-37598665 Msa0249840:CDS 30.0%
!!! TCATGGGTAATTTTTTTACG+AGG + chr2_2:37598662-37598681 Msa0249840:CDS 30.0%
!! TGATTGATTTGGATTCAGAT+GGG + chr2_2:37598752-37598771 Msa0249840:CDS 30.0%
ATGTTGAAATTGGAGTTCAA+CGG + chr2_2:37598836-37598855 Msa0249840:CDS 30.0%
ATATGGCAATCTTGATATTG+TGG + chr2_2:37599381-37599400 Msa0249840:intron 30.0%
CAATCTTGATATTGTGGAAT+AGG + chr2_2:37599387-37599406 Msa0249840:intron 30.0%
ATTAGGAAAACGATACATGT+TGG + chr2_2:37599525-37599544 Msa0249840:intron 30.0%
ATATGTATCTTACCTCATTG+AGG + chr2_2:37599765-37599784 Msa0249840:intron 30.0%
TATGTATCTTACCTCATTGA+GGG + chr2_2:37599766-37599785 Msa0249840:intron 30.0%
! TCATGAGAGTTCTAATATTG+AGG + chr2_2:37599820-37599839 Msa0249840:CDS 30.0%
ATTTCATGATGCAACAATGT+TGG - chr2_2:37599977-37599996 None:intergenic 30.0%
TTGATATACCTAAATTGTGC+AGG + chr2_2:37600004-37600023 Msa0249840:intron 30.0%
ATTTATCACCTGCACAATTT+AGG - chr2_2:37600015-37600034 None:intergenic 30.0%
TGACATTTCAGAAACTTCTT+GGG - chr2_2:37600077-37600096 None:intergenic 30.0%
ATGACATTTCAGAAACTTCT+TGG - chr2_2:37600078-37600097 None:intergenic 30.0%
! CAACACCTTTTTCTACAAAA+AGG + chr2_2:37600103-37600122 Msa0249840:CDS 30.0%
! ACCTTTTTCTACAAAAAGGT+AGG + chr2_2:37600107-37600126 Msa0249840:intron 30.0%
! TCCTACCTTTTTGTAGAAAA+AGG - chr2_2:37600111-37600130 None:intergenic 30.0%
ACCAAGAAATTATTGTCATC+TGG + chr2_2:37600231-37600250 Msa0249840:intron 30.0%
ACCAGATGACAATAATTTCT+TGG - chr2_2:37600235-37600254 None:intergenic 30.0%
AATTGTAGGAAATCAAATGC+AGG - chr2_2:37600413-37600432 None:intergenic 30.0%
TCTCTCTATCAAACTCTTAA+TGG + chr2_2:37600454-37600473 Msa0249840:intron 30.0%
ACCTGAAAATATACTGTGTT+TGG + chr2_2:37600497-37600516 Msa0249840:intron 30.0%
GTTAATTGGCAGTTAATAAG+TGG + chr2_2:37600831-37600850 Msa0249840:intron 30.0%
AACAACTTCAATTGGCTAAA+AGG - chr2_2:37600973-37600992 None:intergenic 30.0%
!!! ATCTGCATGGTTATTTTTTG+TGG + chr2_2:37601194-37601213 Msa0249840:intron 30.0%
!!! TCTGCATGGTTATTTTTTGT+GGG + chr2_2:37601195-37601214 Msa0249840:intron 30.0%
!!! GGTTATTTTTTGTGGGAATT+TGG + chr2_2:37601202-37601221 Msa0249840:intron 30.0%
CAAATGTGTCTGTAATATCT+TGG + chr2_2:37601437-37601456 Msa0249840:intron 30.0%
GCTAAACAACCAAAAATGAT+AGG + chr2_2:37601674-37601693 Msa0249840:intron 30.0%
! CACATGTATCCTATCATTTT+TGG - chr2_2:37601686-37601705 None:intergenic 30.0%
!! TCAAATGCGACACTTATTTT+GGG - chr2_2:37602248-37602267 None:intergenic 30.0%
TTAACTATTGGTGTATTCCT+TGG + chr2_2:37602339-37602358 Msa0249840:intron 30.0%
TAACTATTGGTGTATTCCTT+GGG + chr2_2:37602340-37602359 Msa0249840:intron 30.0%
GGACAAGTTCAAATTTACTT+GGG - chr2_2:37602401-37602420 None:intergenic 30.0%
TGGACAAGTTCAAATTTACT+TGG - chr2_2:37602402-37602421 None:intergenic 30.0%
GTAAATTTGAACTTGTCCAT+CGG + chr2_2:37602403-37602422 Msa0249840:intron 30.0%
ATTGCCATACTATCAAGTTT+CGG - chr2_2:37602465-37602484 None:intergenic 30.0%
TTTCTATGTCTTCACTTTCT+TGG + chr2_2:37602548-37602567 Msa0249840:intron 30.0%
! AACTCTAATTTGAGTTTGGT+AGG + chr2_2:37602574-37602593 Msa0249840:intron 30.0%
TTAAACCAGCAAGAAAACAA+TGG - chr2_2:37603128-37603147 None:intergenic 30.0%
CAAAATTTCTATGCTGATGA+CGG - chr2_2:37603328-37603347 None:intergenic 30.0%
CAAAAGTGAACTATTAGATG+AGG + chr2_2:37603490-37603509 Msa0249840:three_prime_UTR 30.0%
ATGAGGTTTCAACTATGTAA+TGG + chr2_2:37603513-37603532 Msa0249840:three_prime_UTR 30.0%
TGAATAGAAAGAGAATAGAG+AGG - chr2_2:37603550-37603569 None:intergenic 30.0%
AGTATTTGTTCCTTTGTTCA+AGG + chr2_2:37603615-37603634 Msa0249840:three_prime_UTR 30.0%
GAAAAGAATGGTGATTTCAT+TGG + chr2_2:37603652-37603671 Msa0249840:three_prime_UTR 30.0%
!! GATTTCATTGGTAATGATTG+TGG + chr2_2:37603664-37603683 Msa0249840:three_prime_UTR 30.0%
! ATTTTGCACACACTATTTTG+AGG + chr2_2:37603796-37603815 Msa0249840:three_prime_UTR 30.0%
ATTTGATTGTTGGGTAGGAA+AGG - chr2_2:37598290-37598309 None:intergenic 35.0%
CATGTCCAATTTAGGGATTT+AGG - chr2_2:37598345-37598364 None:intergenic 35.0%
TCGTTCTTCGTTTCAATCAA+TGG + chr2_2:37598366-37598385 Msa0249840:exon 35.0%
CGTTCTTCGTTTCAATCAAT+GGG + chr2_2:37598367-37598386 Msa0249840:exon 35.0%
AGATGGTTGAGAAATAGAGA+TGG - chr2_2:37598455-37598474 None:intergenic 35.0%
!!! AATTTGGGTCGTTTTGAAGA+TGG - chr2_2:37598472-37598491 None:intergenic 35.0%
!! GGTGGATTGGTATGAAAATT+TGG - chr2_2:37598488-37598507 None:intergenic 35.0%
!!! CGATTCCGTTGATTTTTTCA+TGG + chr2_2:37598645-37598664 Msa0249840:CDS 35.0%
!! GTGATTGATTTGGATTCAGA+TGG + chr2_2:37598751-37598770 Msa0249840:CDS 35.0%
!! GATTGATTTGGATTCAGATG+GGG + chr2_2:37598753-37598772 Msa0249840:CDS 35.0%
GAGATGAAGGATGTTGAAAT+TGG + chr2_2:37598826-37598845 Msa0249840:CDS 35.0%
CATGAACACTTGAAAGATCA+TGG - chr2_2:37598918-37598937 None:intergenic 35.0%
TGTGTATAAGAAGTTGCTTC+AGG + chr2_2:37598936-37598955 Msa0249840:CDS 35.0%
GTGTATAAGAAGTTGCTTCA+GGG + chr2_2:37598937-37598956 Msa0249840:CDS 35.0%
TCAATTGTTAAGGCCTAAGA+AGG + chr2_2:37599035-37599054 Msa0249840:CDS 35.0%
TGACATAGATACTACAACAC+CGG + chr2_2:37599152-37599171 Msa0249840:intron 35.0%
AGGATAGTGCTATCTATTTG+AGG + chr2_2:37599327-37599346 Msa0249840:intron 35.0%
! TGGTTAGTGTTGCTGTTATA+TGG + chr2_2:37599364-37599383 Msa0249840:intron 35.0%
TAATTATGGTTTAGATGCGG+TGG + chr2_2:37599426-37599445 Msa0249840:intron 35.0%
ATTACTGGTGCTTAGTAATG+TGG + chr2_2:37599564-37599583 Msa0249840:intron 35.0%
TGAAAACCAGAGTAGTATTC+AGG - chr2_2:37599624-37599643 None:intergenic 35.0%
!!! TGAATACTACTCTGGTTTTC+AGG + chr2_2:37599623-37599642 Msa0249840:intron 35.0%
GTTCTTCATCATCTGTTAGA+GGG - chr2_2:37599671-37599690 None:intergenic 35.0%
TGTTCTTCATCATCTGTTAG+AGG - chr2_2:37599672-37599691 None:intergenic 35.0%
TCTAACAGATGATGAAGAAC+AGG + chr2_2:37599671-37599690 Msa0249840:CDS 35.0%
AATCATCAAATCATACCGGT+TGG - chr2_2:37599718-37599737 None:intergenic 35.0%
! ACCGGTATGATTTGATGATT+TGG + chr2_2:37599718-37599737 Msa0249840:intron 35.0%
GCCAAATCATCAAATCATAC+CGG - chr2_2:37599722-37599741 None:intergenic 35.0%
! AGTTCTAATATTGAGGTGTC+AGG + chr2_2:37599827-37599846 Msa0249840:CDS 35.0%
! TGGCTCTTTTACTCAACAAT+GGG - chr2_2:37600179-37600198 None:intergenic 35.0%
! ATGGCTCTTTTACTCAACAA+TGG - chr2_2:37600180-37600199 None:intergenic 35.0%
TCTACACAAACAAATGCTTC+GGG - chr2_2:37600212-37600231 None:intergenic 35.0%
GTCTACACAAACAAATGCTT+CGG - chr2_2:37600213-37600232 None:intergenic 35.0%
GAGTTTGATAGAGAGATAAG+AGG - chr2_2:37600450-37600469 None:intergenic 35.0%
! GCCAAACACAGTATATTTTC+AGG - chr2_2:37600501-37600520 None:intergenic 35.0%
CATATTTGGCATGGAATATG+CGG - chr2_2:37600545-37600564 None:intergenic 35.0%
ATTACAAATCTGTCCGAAGA+TGG + chr2_2:37600868-37600887 Msa0249840:CDS 35.0%
TGGTAAAGACAACAAATCAG+GGG - chr2_2:37601007-37601026 None:intergenic 35.0%
CTGGTAAAGACAACAAATCA+GGG - chr2_2:37601008-37601027 None:intergenic 35.0%
TCTGGTAAAGACAACAAATC+AGG - chr2_2:37601009-37601028 None:intergenic 35.0%
CTTTCAATGAGTCAAGATAC+TGG - chr2_2:37601099-37601118 None:intergenic 35.0%
CAGTATCTTGACTCATTGAA+AGG + chr2_2:37601097-37601116 Msa0249840:CDS 35.0%
TCTTGACTCATTGAAAGGAA+TGG + chr2_2:37601102-37601121 Msa0249840:CDS 35.0%
!! AAAAGTGCTGGTAAAGTTTC+TGG + chr2_2:37601138-37601157 Msa0249840:intron 35.0%
! TTTTCCCTTAGCTTAATCTC+AGG - chr2_2:37601250-37601269 None:intergenic 35.0%
CTAAGGGAAAATCATCTCAT+CGG + chr2_2:37601259-37601278 Msa0249840:intron 35.0%
TGATCTGCATAAGTTGTCAA+TGG - chr2_2:37601419-37601438 None:intergenic 35.0%
!!! AGATATTGGTGGCGATTTTT+GGG + chr2_2:37601490-37601509 Msa0249840:intron 35.0%
TCAGCCAATATTTACCATTG+CGG - chr2_2:37601518-37601537 None:intergenic 35.0%
! ATGGTAAATATTGGCTGACA+TGG + chr2_2:37601520-37601539 Msa0249840:intron 35.0%
TTAAAGGCTTCAAGACAAGA+GGG - chr2_2:37601779-37601798 None:intergenic 35.0%
TTTAAAGGCTTCAAGACAAG+AGG - chr2_2:37601780-37601799 None:intergenic 35.0%
!!! GTTGCTCTGTTATTTTCTGA+AGG + chr2_2:37601815-37601834 Msa0249840:intron 35.0%
GACGAAGTAAAAGACAAAAC+TGG + chr2_2:37601969-37601988 Msa0249840:CDS 35.0%
AAGATATTGATGTAAGCACC+TGG + chr2_2:37601994-37602013 Msa0249840:CDS 35.0%
AGATATTGATGTAAGCACCT+GGG + chr2_2:37601995-37602014 Msa0249840:CDS 35.0%
! GTTCTTTTCTCTACGAATGA+AGG - chr2_2:37602206-37602225 None:intergenic 35.0%
! GTCAAATGCGACACTTATTT+TGG - chr2_2:37602249-37602268 None:intergenic 35.0%
AACTATTGGTGTATTCCTTG+GGG + chr2_2:37602341-37602360 Msa0249840:intron 35.0%
CAAGTTCAAATTTACTTGGG+AGG - chr2_2:37602398-37602417 None:intergenic 35.0%
GAGTTTGGTAGGATTGAAAA+TGG + chr2_2:37602585-37602604 Msa0249840:intron 35.0%
AAGGACACAAGACAAATACA+AGG - chr2_2:37602670-37602689 None:intergenic 35.0%
! CAAAAGTTTTGCTACTGAAC+AGG + chr2_2:37602742-37602761 Msa0249840:intron 35.0%
!!! GAAGCATTTCATTTTTTGGC+AGG + chr2_2:37602846-37602865 Msa0249840:intron 35.0%
CAGCAAGAAAACAATGGTAT+TGG - chr2_2:37603122-37603141 None:intergenic 35.0%
! CAATACCATTGTTTTCTTGC+TGG + chr2_2:37603120-37603139 Msa0249840:intron 35.0%
! CGTCATCAGCATAGAAATTT+TGG + chr2_2:37603326-37603345 Msa0249840:three_prime_UTR 35.0%
!! ATTTTGGTAGCAGTAGTTGA+TGG + chr2_2:37603342-37603361 Msa0249840:three_prime_UTR 35.0%
AGGATCTTCACTTATGGAAT+TGG + chr2_2:37603365-37603384 Msa0249840:three_prime_UTR 35.0%
TGAACTATTAGATGAGGATG+AGG + chr2_2:37603496-37603515 Msa0249840:three_prime_UTR 35.0%
TCCTTTGTTCAAGGAAATTG+AGG + chr2_2:37603624-37603643 Msa0249840:three_prime_UTR 35.0%
CCTTTGTTCAAGGAAATTGA+GGG + chr2_2:37603625-37603644 Msa0249840:three_prime_UTR 35.0%
CTTTGTTCAAGGAAATTGAG+GGG + chr2_2:37603626-37603645 Msa0249840:three_prime_UTR 35.0%
ATTGAGGGGAAAGAAAAGAA+TGG + chr2_2:37603640-37603659 Msa0249840:three_prime_UTR 35.0%
!!! ACACTATTTTGAGGCAAAAC+TGG + chr2_2:37603805-37603824 Msa0249840:three_prime_UTR 35.0%
GAACGAGCATGTCCAATTTA+GGG - chr2_2:37598352-37598371 None:intergenic 40.0%
AGAACGAGCATGTCCAATTT+AGG - chr2_2:37598353-37598372 None:intergenic 40.0%
! TGCATTCTTCAGAGCGTTTA+CGG - chr2_2:37598408-37598427 None:intergenic 40.0%
TGGTTGAGAAATAGAGATGG+TGG - chr2_2:37598452-37598471 None:intergenic 40.0%
! TTATGAAAAGGCGAAGCGTT+CGG + chr2_2:37598687-37598706 Msa0249840:CDS 40.0%
! ATGTAGATTGGTGACACAGA+AGG + chr2_2:37598720-37598739 Msa0249840:CDS 40.0%
GGTTGTTGAGATTCGTGATA+CGG + chr2_2:37598804-37598823 Msa0249840:CDS 40.0%
TTGAAATTGGAGTTCAACGG+CGG + chr2_2:37598839-37598858 Msa0249840:CDS 40.0%
ACCTCAACAAGTTCCTTCTT+AGG - chr2_2:37599051-37599070 None:intergenic 40.0%
TCATCTGTTAGAGGGACAAA+AGG - chr2_2:37599663-37599682 None:intergenic 40.0%
AACAGATGATGAAGAACAGG+AGG + chr2_2:37599674-37599693 Msa0249840:CDS 40.0%
ATCTTACCTCATTGAGGGTT+TGG + chr2_2:37599771-37599790 Msa0249840:intron 40.0%
TCATCATTTAACCATGCACC+CGG - chr2_2:37599875-37599894 None:intergenic 40.0%
ATGCTTCGGGAAGAGTAAAA+TGG - chr2_2:37600199-37600218 None:intergenic 40.0%
CCAACTGTAAACAAAGAGCA+TGG - chr2_2:37600326-37600345 None:intergenic 40.0%
! CCATGCTCTTTGTTTACAGT+TGG + chr2_2:37600323-37600342 Msa0249840:intron 40.0%
ATTGGCAGTTAATAAGTGGC+AGG + chr2_2:37600835-37600854 Msa0249840:intron 40.0%
TTGGCAGTTAATAAGTGGCA+GGG + chr2_2:37600836-37600855 Msa0249840:intron 40.0%
ATGGACGACTCAAAGGAAAT+TGG + chr2_2:37600887-37600906 Msa0249840:CDS 40.0%
TGGACGACTCAAAGGAAATT+GGG + chr2_2:37600888-37600907 Msa0249840:CDS 40.0%
! CAGTGAATTTCTTGGTGGAT+GGG - chr2_2:37601040-37601059 None:intergenic 40.0%
! TTACCAGCACTTTTAGCACA+CGG - chr2_2:37601132-37601151 None:intergenic 40.0%
AGTCACCTGAGATTAAGCTA+AGG + chr2_2:37601242-37601261 Msa0249840:intron 40.0%
GTCACCTGAGATTAAGCTAA+GGG + chr2_2:37601243-37601262 Msa0249840:intron 40.0%
CTTGACAATGTGGCTAAGTT+TGG - chr2_2:37601323-37601342 None:intergenic 40.0%
CAAACTTAGCCACATTGTCA+AGG + chr2_2:37601321-37601340 Msa0249840:intron 40.0%
!!! CAGATATTGGTGGCGATTTT+TGG + chr2_2:37601489-37601508 Msa0249840:intron 40.0%
! GTAAATATTGGCTGACATGG+CGG + chr2_2:37601523-37601542 Msa0249840:intron 40.0%
GTTTGTCATTCATGTTTCCC+AGG + chr2_2:37601932-37601951 Msa0249840:intron 40.0%
TTCGACATATTCTTTCTCCC+AGG - chr2_2:37602015-37602034 None:intergenic 40.0%
!!! GACACTTATTTTGGGACAGA+GGG - chr2_2:37602240-37602259 None:intergenic 40.0%
TGATGTTAAGACACGGTTCT+TGG + chr2_2:37602436-37602455 Msa0249840:intron 40.0%
! GTCACCGAAACTTGATAGTA+TGG + chr2_2:37602458-37602477 Msa0249840:intron 40.0%
CTACTGAACAGGTTTGATTG+CGG + chr2_2:37602753-37602772 Msa0249840:intron 40.0%
GAAATGCTTCATATCCTACC+TGG - chr2_2:37602836-37602855 None:intergenic 40.0%
!! AATTTTGGTCATACCATGCG+CGG - chr2_2:37603096-37603115 None:intergenic 40.0%
TCTCAATCTCAATACCTCCT+TGG - chr2_2:37603256-37603275 None:intergenic 40.0%
ATTGAGAGCTGACTAAGCAA+AGG + chr2_2:37603269-37603288 Msa0249840:exon 40.0%
TTGAGAGCTGACTAAGCAAA+GGG + chr2_2:37603270-37603289 Msa0249840:exon 40.0%
TGATGGAGGATCTTCACTTA+TGG + chr2_2:37603359-37603378 Msa0249840:three_prime_UTR 40.0%
! TCGATAGTTTAGAACGCAGT+AGG + chr2_2:37603451-37603470 Msa0249840:three_prime_UTR 40.0%
!! TTGGTAGTGTTGAGCTTAGT+CGG + chr2_2:37603581-37603600 Msa0249840:three_prime_UTR 40.0%
CCCTCAATTTCCTTGAACAA+AGG - chr2_2:37603628-37603647 None:intergenic 40.0%
!! TCATTGGTAATGATTGTGGC+AGG + chr2_2:37603668-37603687 Msa0249840:three_prime_UTR 40.0%
AGGCTCTACAATTTGAGCAA+TGG + chr2_2:37603688-37603707 Msa0249840:three_prime_UTR 40.0%
! AGATGGTGGTGTGATTGTTG+AGG - chr2_2:37598438-37598457 None:intergenic 45.0%
TCTAGAAACGATGGCGTTTG+AGG - chr2_2:37598524-37598543 None:intergenic 45.0%
TGAACTTCACGGAGGAATTG+GGG - chr2_2:37598571-37598590 None:intergenic 45.0%
GTGAACTTCACGGAGGAATT+GGG - chr2_2:37598572-37598591 None:intergenic 45.0%
! ATTGGTGACACAGAAGGAGA+AGG + chr2_2:37598726-37598745 Msa0249840:CDS 45.0%
GGAGAAGGTGGTGATTGATT+TGG + chr2_2:37598741-37598760 Msa0249840:CDS 45.0%
! TGATTTGGATTCAGATGGGG+AGG + chr2_2:37598756-37598775 Msa0249840:CDS 45.0%
! TTCGGATGATTCTGGTGTTG+TGG + chr2_2:37598780-37598799 Msa0249840:CDS 45.0%
GATTCGTGATACGGAGATGA+AGG + chr2_2:37598813-37598832 Msa0249840:CDS 45.0%
GCATTAGTCAAAGCCGAATC+CGG - chr2_2:37598877-37598896 None:intergenic 45.0%
! GGATTCGGCTTTGACTAATG+CGG + chr2_2:37598876-37598895 Msa0249840:CDS 45.0%
!! GCCTAAGAAGGAACTTGTTG+AGG + chr2_2:37599047-37599066 Msa0249840:CDS 45.0%
GACACATAGAACTGCGACAT+TGG + chr2_2:37599179-37599198 Msa0249840:intron 45.0%
CTGGTGCTTAGTAATGTGGA+CGG + chr2_2:37599568-37599587 Msa0249840:intron 45.0%
TGGTGCTTAGTAATGTGGAC+GGG + chr2_2:37599569-37599588 Msa0249840:intron 45.0%
TGGTTGCCTGAATACTACTC+TGG + chr2_2:37599615-37599634 Msa0249840:intron 45.0%
AGAGGGACAAAAGGCTCAAA+TGG - chr2_2:37599654-37599673 None:intergenic 45.0%
! CATCAAATCATACCGGTTGG+AGG - chr2_2:37599715-37599734 None:intergenic 45.0%
GTTCTGCAGGAGGAAGATAT+TGG + chr2_2:37599793-37599812 Msa0249840:intron 45.0%
AGGTGTCAGGAGAAAAGATG+CGG + chr2_2:37599840-37599859 Msa0249840:CDS 45.0%
CATCATTTAACCATGCACCC+GGG - chr2_2:37599874-37599893 None:intergenic 45.0%
GGGTGCATGGTTAAATGATG+AGG + chr2_2:37599874-37599893 Msa0249840:CDS 45.0%
TTCCATGCCAAATATGCCAC+AGG + chr2_2:37600549-37600568 Msa0249840:intron 45.0%
TCCATGCCAAATATGCCACA+GGG + chr2_2:37600550-37600569 Msa0249840:intron 45.0%
CAGTTAATAAGTGGCAGGGA+TGG + chr2_2:37600840-37600859 Msa0249840:intron 45.0%
TCCTTTGAGTCGTCCATCTT+CGG - chr2_2:37600884-37600903 None:intergenic 45.0%
GGTGGATGGGTACAAATATC+TGG - chr2_2:37601027-37601046 None:intergenic 45.0%
CCAGTGAATTTCTTGGTGGA+TGG - chr2_2:37601041-37601060 None:intergenic 45.0%
CCATCCACCAAGAAATTCAC+TGG + chr2_2:37601038-37601057 Msa0249840:CDS 45.0%
AGCACCAGTGAATTTCTTGG+TGG - chr2_2:37601045-37601064 None:intergenic 45.0%
CCAAGCACCAGTGAATTTCT+TGG - chr2_2:37601048-37601067 None:intergenic 45.0%
CCAAGAAATTCACTGGTGCT+TGG + chr2_2:37601045-37601064 Msa0249840:CDS 45.0%
!! TCTCAGGTGACTTGTTGTGA+AGG - chr2_2:37601234-37601253 None:intergenic 45.0%
! ATCATCTCATCGGTTGCTCA+TGG + chr2_2:37601269-37601288 Msa0249840:intron 45.0%
ACTTAGCCACATTGTCAAGG+TGG + chr2_2:37601324-37601343 Msa0249840:intron 45.0%
CAACAACCACCTTGACAATG+TGG - chr2_2:37601333-37601352 None:intergenic 45.0%
ATCAACAGCTGAGCCAAGTA+TGG + chr2_2:37601466-37601485 Msa0249840:intron 45.0%
GAGCCAAGTATGGCAGATAT+TGG + chr2_2:37601476-37601495 Msa0249840:intron 45.0%
CCACCAATATCTGCCATACT+TGG - chr2_2:37601482-37601501 None:intergenic 45.0%
CCAAGTATGGCAGATATTGG+TGG + chr2_2:37601479-37601498 Msa0249840:intron 45.0%
GGCTCCGCAATGGTAAATAT+TGG + chr2_2:37601511-37601530 Msa0249840:intron 45.0%
AGCCAAAATTCCACCATACC+GGG - chr2_2:37601595-37601614 None:intergenic 45.0%
GAGCCAAAATTCCACCATAC+CGG - chr2_2:37601596-37601615 None:intergenic 45.0%
TCATTCATGTTTCCCAGGCT+AGG + chr2_2:37601937-37601956 Msa0249840:intron 45.0%
GTCTACATAGTACCTAGCCT+GGG - chr2_2:37601952-37601971 None:intergenic 45.0%
ACCTTCCTGAGCAGGAAAAT+GGG + chr2_2:37602036-37602055 Msa0249840:CDS 45.0%
! ACAAACCCATTTTCCTGCTC+AGG - chr2_2:37602044-37602063 None:intergenic 45.0%
!!! CGACACTTATTTTGGGACAG+AGG - chr2_2:37602241-37602260 None:intergenic 45.0%
ATCAATGAACTATGGCCCCA+AGG - chr2_2:37602359-37602378 None:intergenic 45.0%
!! TATGCCGACTTCTATAGCAG+AGG + chr2_2:37602792-37602811 Msa0249840:CDS 45.0%
!!! GGTCTGTGTTTTAACCAGGT+AGG + chr2_2:37602819-37602838 Msa0249840:intron 45.0%
! TGGTCTTTTTAAACCGCGCA+TGG + chr2_2:37603080-37603099 Msa0249840:intron 45.0%
CAATGATGCTTTGATGCCTG+TGG + chr2_2:37603154-37603173 Msa0249840:intron 45.0%
ATGTAAAAGATCGCGTCCAC+AGG - chr2_2:37603173-37603192 None:intergenic 45.0%
!! TGATGACGGAGTATTGGACT+GGG - chr2_2:37603314-37603333 None:intergenic 45.0%
!! CTATGCTGATGACGGAGTAT+TGG - chr2_2:37603320-37603339 None:intergenic 45.0%
!! TTGGTAGCAGTAGTTGATGG+AGG + chr2_2:37603345-37603364 Msa0249840:three_prime_UTR 45.0%
AACTGACTACACATATGCCC+CGG + chr2_2:37603411-37603430 Msa0249840:three_prime_UTR 45.0%
!! TTGAGCTTAGTCGGTTTGCT+CGG + chr2_2:37603590-37603609 Msa0249840:three_prime_UTR 45.0%
!! AATAAAATTTATTCAAAATT+AGG - chr2_2:37603719-37603738 None:intergenic 5.0%
! AGAGCGTTTACGGTTGCTTG+TGG - chr2_2:37598398-37598417 None:intergenic 50.0%
GGTGGTGTGATTGTTGAGGA+CGG - chr2_2:37598434-37598453 None:intergenic 50.0%
! ATGGCGTTTGAGGTGGAAAC+GGG - chr2_2:37598514-37598533 None:intergenic 50.0%
! GATGGCGTTTGAGGTGGAAA+CGG - chr2_2:37598515-37598534 None:intergenic 50.0%
AGAAACGATGGCGTTTGAGG+TGG - chr2_2:37598521-37598540 None:intergenic 50.0%
ACGGGAGAGTCTAGAAACGA+TGG - chr2_2:37598533-37598552 None:intergenic 50.0%
!! GGAATTGGGGTTTGGTGTCT+GGG - chr2_2:37598558-37598577 None:intergenic 50.0%
!! AGGAATTGGGGTTTGGTGTC+TGG - chr2_2:37598559-37598578 None:intergenic 50.0%
TTCACGGAGGAATTGGGGTT+TGG - chr2_2:37598566-37598585 None:intergenic 50.0%
CGTGAACTTCACGGAGGAAT+TGG - chr2_2:37598573-37598592 None:intergenic 50.0%
! GGCGTTGGGGAAATGTAGAT+TGG + chr2_2:37598708-37598727 Msa0249840:CDS 50.0%
GGATTCAGATGGGGAGGATT+CGG + chr2_2:37598762-37598781 Msa0249840:CDS 50.0%
!! GGATGATTCTGGTGTTGTGG+AGG + chr2_2:37598783-37598802 Msa0249840:CDS 50.0%
! TTCGGCTTTGACTAATGCGG+TGG + chr2_2:37598879-37598898 Msa0249840:CDS 50.0%
GACTAATGCGGTGGTGAATG+TGG + chr2_2:37598888-37598907 Msa0249840:CDS 50.0%
! TGCTTCAGGGTGTTCAGAGA+AGG + chr2_2:37598950-37598969 Msa0249840:CDS 50.0%
GCAGTTCTATGTGTCGTGTC+CGG - chr2_2:37599174-37599193 None:intergenic 50.0%
GACTTGTGCCAGTGTTGTGT+CGG + chr2_2:37599263-37599282 Msa0249840:intron 50.0%
!! ATAGAGCACCGACACAACAC+TGG - chr2_2:37599274-37599293 None:intergenic 50.0%
! GTGTTGTGTCGGTGCTCTAT+AGG + chr2_2:37599274-37599293 Msa0249840:intron 50.0%
GCTTAGTAATGTGGACGGGT+TGG + chr2_2:37599573-37599592 Msa0249840:intron 50.0%
GCAGAACCAAACCCTCAATG+AGG - chr2_2:37599780-37599799 None:intergenic 50.0%
!! CATTGAGGGTTTGGTTCTGC+AGG + chr2_2:37599780-37599799 Msa0249840:intron 50.0%
! ACCTCGAGTTGCTGAAAGAG+AGG + chr2_2:37600039-37600058 Msa0249840:CDS 50.0%
! CCTCGAGTTGCTGAAAGAGA+GGG + chr2_2:37600040-37600059 Msa0249840:CDS 50.0%
TCCCTGTGGCATATTTGGCA+TGG - chr2_2:37600554-37600573 None:intergenic 50.0%
GCTGTTCCCTGTGGCATATT+TGG - chr2_2:37600559-37600578 None:intergenic 50.0%
TATGCCACAGGGAACAGCAA+AGG + chr2_2:37600561-37600580 Msa0249840:intron 50.0%
ATGCCACAGGGAACAGCAAA+GGG + chr2_2:37600562-37600581 Msa0249840:intron 50.0%
!! AAACCCTTTGCTGTTCCCTG+TGG - chr2_2:37600568-37600587 None:intergenic 50.0%
TCCGAAGATGGACGACTCAA+AGG + chr2_2:37600880-37600899 Msa0249840:CDS 50.0%
! TAGCCGTGTGCTAAAAGTGC+TGG + chr2_2:37601126-37601145 Msa0249840:CDS 50.0%
TCCGCCATAATCCGTTACGA+TGG + chr2_2:37601551-37601570 Msa0249840:intron 50.0%
!! GCCATCGTAACGGATTATGG+CGG - chr2_2:37601555-37601574 None:intergenic 50.0%
!! GGTGCCATCGTAACGGATTA+TGG - chr2_2:37601558-37601577 None:intergenic 50.0%
!! GCTTTGTGGTGCCATCGTAA+CGG - chr2_2:37601565-37601584 None:intergenic 50.0%
GTTACGATGGCACCACAAAG+CGG + chr2_2:37601564-37601583 Msa0249840:intron 50.0%
AAATTCCACCATACCGGGAC+CGG - chr2_2:37601590-37601609 None:intergenic 50.0%
!! GTCCCGGTATGGTGGAATTT+TGG + chr2_2:37601590-37601609 Msa0249840:intron 50.0%
!!! GGAATTTTGGCTCTCCACCA+TGG + chr2_2:37601603-37601622 Msa0249840:intron 50.0%
TCCTAATCTAGCGCTGTCGA+TGG - chr2_2:37601633-37601652 None:intergenic 50.0%
TCGACAGCGCTAGATTAGGA+AGG + chr2_2:37601633-37601652 Msa0249840:intron 50.0%
AGGCTTCAAGACAAGAGGGT+AGG - chr2_2:37601775-37601794 None:intergenic 50.0%
CGTCTACATAGTACCTAGCC+TGG - chr2_2:37601953-37601972 None:intergenic 50.0%
GACCTTCCTGAGCAGGAAAA+TGG + chr2_2:37602035-37602054 Msa0249840:CDS 50.0%
! ACCCATTTTCCTGCTCAGGA+AGG - chr2_2:37602040-37602059 None:intergenic 50.0%
!!! TATTTTGGGACAGAGGGAGC+AGG - chr2_2:37602234-37602253 None:intergenic 50.0%
CCTGAAAAGATGGGGAGTCA+AGG - chr2_2:37602689-37602708 None:intergenic 50.0%
! CCTTGACTCCCCATCTTTTC+AGG + chr2_2:37602686-37602705 Msa0249840:intron 50.0%
CAGGCCTCTGCTATAGAAGT+CGG - chr2_2:37602799-37602818 None:intergenic 50.0%
GACTTCTATAGCAGAGGCCT+GGG + chr2_2:37602798-37602817 Msa0249840:CDS 50.0%
CCTGGTTAAAACACAGACCC+AGG - chr2_2:37602818-37602837 None:intergenic 50.0%
!!! CCTGGGTCTGTGTTTTAACC+AGG + chr2_2:37602815-37602834 Msa0249840:CDS 50.0%
!! CTGATGACGGAGTATTGGAC+TGG - chr2_2:37603315-37603334 None:intergenic 50.0%
! GTTTGAGGTGGAAACGGGTC+GGG - chr2_2:37598509-37598528 None:intergenic 55.0%
! CGTTTGAGGTGGAAACGGGT+CGG - chr2_2:37598510-37598529 None:intergenic 55.0%
!! GGGTTTGGTGTCTGGGTAAC+GGG - chr2_2:37598551-37598570 None:intergenic 55.0%
!! GGGGTTTGGTGTCTGGGTAA+CGG - chr2_2:37598552-37598571 None:intergenic 55.0%
TACAGGGCGCGTGAACTTCA+CGG - chr2_2:37598582-37598601 None:intergenic 55.0%
GGTGACACAGAAGGAGAAGG+TGG + chr2_2:37598729-37598748 Msa0249840:CDS 55.0%
GGGGAGGATTCGGATGATTC+TGG + chr2_2:37598772-37598791 Msa0249840:CDS 55.0%
TGGAGTTCAACGGCGGTCAT+CGG + chr2_2:37598846-37598865 Msa0249840:CDS 55.0%
! CTTGCGCGTTTTCCTCCAAC+CGG + chr2_2:37599700-37599719 Msa0249840:CDS 55.0%
!! TGAGGGTTTGGTTCTGCAGG+AGG + chr2_2:37599783-37599802 Msa0249840:intron 55.0%
AAAGATGCGGTGCCTTCTCC+CGG + chr2_2:37599853-37599872 Msa0249840:CDS 55.0%
TTAACCATGCACCCGGGAGA+AGG - chr2_2:37599868-37599887 None:intergenic 55.0%
CCCTCTCTTTCAGCAACTCG+AGG - chr2_2:37600043-37600062 None:intergenic 55.0%
!! GCGATTTTTGGGCTCCGCAA+TGG + chr2_2:37601501-37601520 Msa0249840:intron 55.0%
GCCATCGACAGCGCTAGATT+AGG + chr2_2:37601629-37601648 Msa0249840:intron 55.0%
TGTCGAAGACCTTCCTGAGC+AGG + chr2_2:37602028-37602047 Msa0249840:CDS 55.0%
CGACTTCTATAGCAGAGGCC+TGG + chr2_2:37602797-37602816 Msa0249840:CDS 55.0%
ACACATATGCCCCGGTGTCT+AGG + chr2_2:37603419-37603438 Msa0249840:three_prime_UTR 55.0%
ACGCGTTGTACCTAGACACC+GGG - chr2_2:37603432-37603451 None:intergenic 55.0%
GACGCGTTGTACCTAGACAC+CGG - chr2_2:37603433-37603452 None:intergenic 55.0%
TGGAAACGGGTCGGGTGGAT+TGG - chr2_2:37598501-37598520 None:intergenic 60.0%
! AAAGGCGAAGCGTTCGGCGT+TGG + chr2_2:37598693-37598712 Msa0249840:CDS 60.0%
! AAGGCGAAGCGTTCGGCGTT+GGG + chr2_2:37598694-37598713 Msa0249840:CDS 60.0%
GGAGTTCAACGGCGGTCATC+GGG + chr2_2:37598847-37598866 Msa0249840:CDS 60.0%
GTCATCGGGTTCGCCGGATT+CGG + chr2_2:37598861-37598880 Msa0249840:CDS 60.0%
AAGATGCGGTGCCTTCTCCC+GGG + chr2_2:37599854-37599873 Msa0249840:CDS 60.0%
CTGTCGATGGCAGTCCATGG+TGG - chr2_2:37601620-37601639 None:intergenic 60.0%
ACATGCCTTACTTCCGGCGC+AGG + chr2_2:37603226-37603245 Msa0249840:CDS 60.0%
CGCGTTGTACCTAGACACCG+GGG - chr2_2:37603431-37603450 None:intergenic 60.0%
TGAGGTGGAAACGGGTCGGG+TGG - chr2_2:37598506-37598525 None:intergenic 65.0%
AGGGCGCGTGAACTTCACGG+AGG - chr2_2:37598579-37598598 None:intergenic 65.0%
! AGGCGAAGCGTTCGGCGTTG+GGG + chr2_2:37598695-37598714 Msa0249840:CDS 65.0%
CGATGGCACCACAAAGCGGC+CGG + chr2_2:37601568-37601587 Msa0249840:intron 65.0%
GCGCTGTCGATGGCAGTCCA+TGG - chr2_2:37601623-37601642 None:intergenic 65.0%
GCTGTCCTGCGCCGGAAGTA+AGG - chr2_2:37603234-37603253 None:intergenic 65.0%
ACGGCGGTCATCGGGTTCGC+CGG + chr2_2:37598855-37598874 Msa0249840:CDS 70.0%
GGTGCCTTCTCCCGGGTGCA+TGG + chr2_2:37599861-37599880 Msa0249840:CDS 70.0%
CACCACAAAGCGGCCGGTCC+CGG + chr2_2:37601574-37601593 Msa0249840:intron 70.0%
! TACCGGGACCGGCCGCTTTG+TGG - chr2_2:37601579-37601598 None:intergenic 70.0%
CAAAGCGGCCGGTCCCGGTA+TGG + chr2_2:37601579-37601598 Msa0249840:intron 70.0%
CTTCCGGCGCAGGACAGCCA+AGG + chr2_2:37603236-37603255 Msa0249840:CDS 70.0%
CCTCCTTGGCTGTCCTGCGC+CGG - chr2_2:37603242-37603261 None:intergenic 70.0%
AGCGGCCGGTCCCGGTATGG+TGG + chr2_2:37601582-37601601 Msa0249840:intron 75.0%
CCGGCGCAGGACAGCCAAGG+AGG + chr2_2:37603239-37603258 Msa0249840:CDS 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 37598226 37603828 37598226 ID=Msa0249840;Name=Msa0249840
chr2_2 mRNA 37598226 37603828 37598226 ID=Msa0249840-mRNA-1;Parent=Msa0249840;Name=Msa0249840-mRNA-1;_AED=0.10;_eAED=0.10;_QI=159|1|1|1|1|1|9|544|468
chr2_2 exon 37598226 37599068 37598226 ID=Msa0249840-mRNA-1:exon:11839;Parent=Msa0249840-mRNA-1
chr2_2 exon 37599645 37599721 37599645 ID=Msa0249840-mRNA-1:exon:11840;Parent=Msa0249840-mRNA-1
chr2_2 exon 37599802 37599895 37599802 ID=Msa0249840-mRNA-1:exon:11841;Parent=Msa0249840-mRNA-1
chr2_2 exon 37600026 37600124 37600026 ID=Msa0249840-mRNA-1:exon:11842;Parent=Msa0249840-mRNA-1
chr2_2 exon 37600843 37600935 37600843 ID=Msa0249840-mRNA-1:exon:11843;Parent=Msa0249840-mRNA-1
chr2_2 exon 37601028 37601147 37601028 ID=Msa0249840-mRNA-1:exon:11844;Parent=Msa0249840-mRNA-1
chr2_2 exon 37601954 37602057 37601954 ID=Msa0249840-mRNA-1:exon:11845;Parent=Msa0249840-mRNA-1
chr2_2 exon 37602764 37602836 37602764 ID=Msa0249840-mRNA-1:exon:11846;Parent=Msa0249840-mRNA-1
chr2_2 exon 37603222 37603828 37603222 ID=Msa0249840-mRNA-1:exon:11847;Parent=Msa0249840-mRNA-1
chr2_2 five_prime_UTR 37598226 37598384 37598226 ID=Msa0249840-mRNA-1:five_prime_utr;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37598385 37599068 37598385 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37599645 37599721 37599645 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37599802 37599895 37599802 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37600026 37600124 37600026 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37600843 37600935 37600843 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37601028 37601147 37601028 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37601954 37602057 37601954 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37602764 37602836 37602764 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 CDS 37603222 37603284 37603222 ID=Msa0249840-mRNA-1:cds;Parent=Msa0249840-mRNA-1
chr2_2 three_prime_UTR 37603285 37603828 37603285 ID=Msa0249840-mRNA-1:three_prime_utr;Parent=Msa0249840-mRNA-1
Gene Sequence

>Msa0249840

ATGGGTATGACCACAAGCAACCGTAAACGCTCTGAAGAATGCATGTCCGTCCTCAACAATCACACCACCATCTCTATTTCTCAACCATCTTCAAAACGACCCAAATTTTCATACCAATCCACCCGACCCGTTTCCACCTCAAACGCCATCGTTTCTAGACTCTCCCGTTACCCAGACACCAAACCCCAATTCCTCCGTGAAGTTCACGCGCCCTGTAGACCTAAAAAATTCAACTTTTCAAGAAAATTATCGAATTTCAGCGATTCCGTTGATTTTTTCATGGGTAATTTTTTTACGAGGAATTATGAAAAGGCGAAGCGTTCGGCGTTGGGGAAATGTAGATTGGTGACACAGAAGGAGAAGGTGGTGATTGATTTGGATTCAGATGGGGAGGATTCGGATGATTCTGGTGTTGTGGAGGTTGTTGAGATTCGTGATACGGAGATGAAGGATGTTGAAATTGGAGTTCAACGGCGGTCATCGGGTTCGCCGGATTCGGCTTTGACTAATGCGGTGGTGAATGTGGAAGACCATGATCTTTCAAGTGTTCATGTGTATAAGAAGTTGCTTCAGGGTGTTCAGAGAAGGACTGATACTATTCAAAATTTGAATTTTCAAATTGAGTTGAATGAGAAGAGAAGAGATACTTTTCAATTGTTAAGGCCTAAGAAGGAACTTGTTGAGGAAGTGCCATTTGAGCCTTTTGTCCCTCTAACAGATGATGAAGAACAGGAGGTTTCTTGCGCGTTTTCCTCCAACCGGAGGAAGATATTGGTTGCTCATGAGAGTTCTAATATTGAGGTGTCAGGAGAAAAGATGCGGTGCCTTCTCCCGGGTGCATGGTTAAATGATGAGGTGATAAATTTGTACCTCGAGTTGCTGAAAGAGAGGGAGCGAAGAGAACCCAAGAAGTTTCTGAAATGTCATTTTTTCAACACCTTTTTCTACAAAAAGTTAATAAGTGGCAGGGATGGATATGATTACAAATCTGTCCGAAGATGGACGACTCAAAGGAAATTGGGATACAGCCTATTTGATTGTGATAAAATATTTGTACCCATCCACCAAGAAATTCACTGGTGCTTGGCAGTTATCAATAAAAGAGATGCAAAATTCCAGTATCTTGACTCATTGAAAGGAATGGATAGCCGTGTGCTAAAAGTGCTGGCTAGGTACTATGTAGACGAAGTAAAAGACAAAACTGGAAAAGATATTGATGTAAGCACCTGGGAGAAAGAATATGTCGAAGACCTTCCTGAGCAGGAAAATGGGTTTGATTGCGGCGTGTTTATGATCAAATATGCCGACTTCTATAGCAGAGGCCTGGGTCTGTGTTTTAACCAGGAACACATGCCTTACTTCCGGCGCAGGACAGCCAAGGAGGTATTGAGATTGAGAGCTGACTAA
Protein sequence

>Msa0249840

MGMTTSNRKRSEECMSVLNNHTTISISQPSSKRPKFSYQSTRPVSTSNAIVSRLSRYPDTKPQFLREVHAPCRPKKFNFSRKLSNFSDSVDFFMGNFFTRNYEKAKRSALGKCRLVTQKEKVVIDLDSDGEDSDDSGVVEVVEIRDTEMKDVEIGVQRRSSGSPDSALTNAVVNVEDHDLSSVHVYKKLLQGVQRRTDTIQNLNFQIELNEKRRDTFQLLRPKKELVEEVPFEPFVPLTDDEEQEVSCAFSSNRRKILVAHESSNIEVSGEKMRCLLPGAWLNDEVINLYLELLKERERREPKKFLKCHFFNTFFYKKLISGRDGYDYKSVRRWTTQRKLGYSLFDCDKIFVPIHQEIHWCLAVINKRDAKFQYLDSLKGMDSRVLKVLARYYVDEVKDKTGKDIDVSTWEKEYVEDLPEQENGFDCGVFMIKYADFYSRGLGLCFNQEHMPYFRRRTAKEVLRLRAD*