AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0250020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0250020 MtrunA17_Chr2g0296381 99.596 742 3 0 1 742 1 742 0.0 1527
Msa0250020 MtrunA17_Chr4g0067011 93.396 742 49 0 1 742 3 744 0.0 1443
Msa0250020 MtrunA17_Chr7g0268881 85.347 389 57 0 354 742 1 389 0.0 703
Msa0250020 MtrunA17_Chr7g0268891 72.189 338 92 1 3 340 2 337 0.0 521
Msa0250020 MtrunA17_Chr8g0361901 34.225 710 428 13 43 742 51 731 4.86e-131 405
Msa0250020 MtrunA17_Chr6g0453061 33.513 743 449 14 10 742 23 730 1.14e-126 394
Msa0250020 MtrunA17_Chr5g0416711 34.153 732 439 15 23 742 32 732 1.05e-121 381
Msa0250020 MtrunA17_Chr6g0453081 32.571 743 456 15 10 742 23 730 1.05e-120 379
Msa0250020 MtrunA17_Chr1g0166181 35.455 660 396 11 92 742 101 739 4.58e-120 377
Msa0250020 MtrunA17_Chr2g0285881 33.194 720 433 14 34 742 110 792 1.62e-118 374
Msa0250020 MtrunA17_Chr1g0166131 34.493 661 401 12 92 742 102 740 6.50e-115 363
Msa0250020 MtrunA17_Chr7g0231701 32.727 660 401 11 92 742 83 708 1.47e-106 341
Msa0250020 MtrunA17_Chr1g0166141 34.983 606 366 9 144 742 90 674 5.87e-104 333
Msa0250020 MtrunA17_Chr7g0231741 40.576 382 211 7 369 742 2 375 1.20e-80 262
Msa0250020 MtrunA17_Chr4g0067071 55.500 200 89 0 7 206 5 204 2.00e-71 232
Msa0250020 MtrunA17_Chr4g0067051 54.412 204 89 2 5 206 3 204 7.08e-68 222
Msa0250020 MtrunA17_Chr4g0067031 51.770 226 101 3 2 222 6 228 1.71e-64 219
Msa0250020 MtrunA17_Chr5g0416691 36.562 413 238 10 341 742 2 401 2.85e-64 219
Msa0250020 MtrunA17_Chr7g0231791 36.010 411 243 9 341 742 2 401 3.35e-63 216
Msa0250020 MtrunA17_Chr4g0067381 52.683 205 94 1 2 206 4 205 4.87e-62 206
Msa0250020 MtrunA17_Chr5g0416831 34.557 327 167 7 423 742 3 289 4.78e-49 174
Msa0250020 MtrunA17_Chr5g0416731 26.498 434 273 11 44 443 25 446 2.18e-39 151
Msa0250020 MtrunA17_Chr7g0231721 26.765 340 227 8 48 385 29 348 2.72e-35 137
Msa0250020 MtrunA17_Chr7g0231581 26.710 307 206 6 76 380 22 311 4.09e-32 127
Msa0250020 MtrunA17_Chr5g0416901 26.710 307 206 5 76 380 46 335 6.80e-32 127
Msa0250020 MtrunA17_Chr7g0231751 27.891 294 186 7 32 305 21 308 1.60e-28 116
Msa0250020 MtrunA17_Chr7g0231571 29.464 224 152 4 76 297 22 241 5.79e-27 110
Msa0250020 MtrunA17_Chr4g0074661 58.427 89 36 1 1 89 1 88 7.82e-27 105
Msa0250020 MtrunA17_Chr5g0416911 29.018 224 153 4 76 297 30 249 8.66e-27 110
Msa0250020 MtrunA17_Chr5g0416681 26.027 219 156 2 89 304 36 251 2.61e-19 88.2
Msa0250020 MtrunA17_Chr7g0231801 26.027 219 156 2 89 304 36 251 2.98e-19 88.2
Msa0250020 MtrunA17_Chr4g0068101 51.087 92 45 0 75 166 14 105 2.92e-17 78.2
Msa0250020 MtrunA17_Chr1g0166151 24.719 178 125 5 92 267 14 184 1.78e-12 66.6
Msa0250020 MtrunA17_Chr2g0285291 76.923 39 9 0 618 656 30 68 3.27e-12 63.2
Msa0250020 MtrunA17_Chr4g0042591 28.962 183 118 4 423 596 553 732 4.92e-12 69.7
Msa0250020 MtrunA17_Chr7g0222201 26.768 198 135 3 423 611 563 759 8.20e-12 68.9
Msa0250020 MtrunA17_Chr4g0042651 27.225 191 129 3 423 604 553 742 1.41e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0250020 AT4G02570.4 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0250020 AT4G02570.2 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0250020 AT4G02570.1 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0250020 AT4G02570.3 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0250020 AT1G02980.1 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0250020 AT1G02980.2 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0250020 AT1G43140.1 65.405 740 225 3 4 742 12 721 0.0 1005
Msa0250020 AT1G59790.2 57.552 384 142 3 1 382 6 370 6.37e-153 449
Msa0250020 AT1G59790.1 57.527 372 137 3 1 370 6 358 1.72e-147 436
Msa0250020 AT1G26830.1 34.312 749 434 14 10 742 26 732 9.45e-135 416
Msa0250020 AT1G69670.1 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0250020 AT1G69670.2 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0250020 AT5G46210.1 34.123 718 423 16 37 742 113 792 6.02e-111 355
Msa0250020 AT1G59800.1 54.098 244 108 1 7 250 7 246 2.09e-88 278
Msa0250020 AT2G04660.1 27.041 196 133 2 423 611 543 735 9.25e-11 65.9

Find 184 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTCTGACCACTGGTTTC+TGG 0.082911 2_2:+37826965 Msa0250020:CDS
TTCTCGTTTCTTTCACTATT+TGG 0.108715 2_2:+37823009 Msa0250020:CDS
GCACGATTCTTTACCGAAAA+AGG 0.119181 2_2:+37819615 Msa0250020:five_prime_UTR
CGCAATTCCTATTTCCAATA+TGG 0.172526 2_2:-37828413 None:intergenic
CCTTCACCGAAACCTTTATC+AGG 0.234716 2_2:+37819570 Msa0250020:five_prime_UTR
CAGGTTTACAAGGAAGTAAA+TGG 0.245353 2_2:+37823206 Msa0250020:intron
CATTATCTTTGTCTCTTTCC+AGG 0.286661 2_2:-37828055 None:intergenic
GAATCGAAACCTCACTTCTA+TGG 0.303904 2_2:+37828508 Msa0250020:three_prime_UTR
TCCCACCCCATATTGGAAAT+AGG 0.304343 2_2:+37828406 Msa0250020:three_prime_UTR
CACAACCTGCTTAAATATAC+TGG 0.307077 2_2:-37824103 None:intergenic
GCTGACTTGCTTTCGTGATT+TGG 0.326859 2_2:+37823081 Msa0250020:CDS
GCAGTTAGGCCGCATGTTTA+AGG 0.326909 2_2:+37827891 Msa0250020:CDS
TTAGATATATTTGTGGAGAT+TGG 0.327866 2_2:+37823392 Msa0250020:CDS
TGCAAATTTGTTCAAGTACT+TGG 0.329885 2_2:+37828076 Msa0250020:CDS
AATCAGGACAAGAATCTTCT+AGG 0.335743 2_2:-37823508 None:intergenic
ACTTACTTGGATTTATTCCT+TGG 0.340182 2_2:+37827192 Msa0250020:CDS
TCAATTCCGGGGTCTACATT+AGG 0.343246 2_2:-37826931 None:intergenic
AATATTCCTCAAAGCTTGTT+TGG 0.345806 2_2:-37826897 None:intergenic
AAATTTCCCACTTATATTGC+AGG 0.345820 2_2:-37827218 None:intergenic
GCAATTCCTATTTCCAATAT+GGG 0.346266 2_2:-37828412 None:intergenic
ACAGAAGCTGAAGAATATTC+TGG 0.348230 2_2:+37820303 Msa0250020:CDS
TGAATTAAATTCAAAATAAT+CGG 0.349101 2_2:-37827581 None:intergenic
TGTTGTTTACCTATAAAATT+CGG 0.355958 2_2:-37825821 None:intergenic
TTCTTAATTGCCTTGACATC+AGG 0.359018 2_2:-37828002 None:intergenic
ACTGAGTTATTCTGAGATAA+TGG 0.365223 2_2:+37827450 Msa0250020:CDS
TGTGGAATAGAGTATGATTC+TGG 0.367247 2_2:-37825443 None:intergenic
ATTTATAGCTCCTTCCTTCA+AGG 0.370395 2_2:-37828203 None:intergenic
CTAAGCACAGAAAACTTACT+TGG 0.371035 2_2:+37827179 Msa0250020:CDS
ACCATAAAATCATGGTTAGA+TGG 0.374090 2_2:+37822984 Msa0250020:CDS
GGTAATATTGCTTTCGTGCT+TGG 0.374335 2_2:-37827556 None:intergenic
CCTCAATCTTCCTGCAGAAA+TGG 0.374444 2_2:+37827008 Msa0250020:CDS
GCTTGAAACGGGAGAAAGAT+AGG 0.374850 2_2:+37823625 Msa0250020:CDS
CACCAACGTTGTACCTTCTT+CGG 0.375640 2_2:-37824250 None:intergenic
GTTACTCTCAATTTCCTTGA+AGG 0.383477 2_2:+37828189 Msa0250020:three_prime_UTR
TTATTTCTCCCACCCCATAT+TGG 0.383729 2_2:+37828399 Msa0250020:three_prime_UTR
GGTTGCAGAGTTTGGTGTTA+AGG 0.385080 2_2:+37820208 Msa0250020:intron
CTTCCTCCGCTTAATGAAGT+TGG 0.395619 2_2:+37823058 Msa0250020:CDS
AGCCAGCCGATACTTGGATA+TGG 0.398900 2_2:-37828243 None:intergenic
TTGCGTTACTTTAGTTTAAG+TGG 0.403889 2_2:+37828431 Msa0250020:three_prime_UTR
TTCTAAAATACCCAAAGGCT+TGG 0.406125 2_2:+37824071 Msa0250020:CDS
TGTGATAATATTCTCAAGAA+AGG 0.408911 2_2:+37825618 Msa0250020:CDS
TATAATTAAGTAGGCCTAGA+TGG 0.410312 2_2:+37828308 Msa0250020:three_prime_UTR
GGGGTGGGAGAAATAATTAA+TGG 0.411150 2_2:-37828392 None:intergenic
TCAGAGCTGAACTGAGGTTC+AGG 0.411217 2_2:-37820334 None:intergenic
TACAGTAGCCAGCCGATACT+TGG 0.411984 2_2:-37828249 None:intergenic
CTTGTACTTGGCACATGATA+AGG 0.420595 2_2:-37827518 None:intergenic
TTCCTCCGCTTAATGAAGTT+GGG 0.422753 2_2:+37823059 Msa0250020:CDS
AGAAACCCTGATAAAGGTTT+CGG 0.422836 2_2:-37819576 None:intergenic
AGCGGTTGGGAATAGTCATT+TGG 0.424285 2_2:-37820500 None:intergenic
AATGTCTGCAGCCGGAGAAA+AGG 0.425273 2_2:+37825248 Msa0250020:intron
GGAGATTGGAATGGGGCATA+TGG 0.426092 2_2:+37823406 Msa0250020:CDS
CTTGTTAAGAATCTTGTACT+TGG 0.426803 2_2:-37827530 None:intergenic
TAGCGAGCCCAAGTTATTAG+AGG 0.429320 2_2:+37823671 Msa0250020:CDS
AGTAACTGTCAAGTCAATTC+CGG 0.431096 2_2:-37826944 None:intergenic
TGCTTAAATATACTGGAAAC+AGG 0.431414 2_2:-37824096 None:intergenic
GGAAACAGGATCCAAGCCTT+TGG 0.432362 2_2:-37824082 None:intergenic
TAAAGAATCGTGCGCGATGA+TGG 0.434250 2_2:-37819605 None:intergenic
AGTAAGAGAAACCCTGATAA+AGG 0.435682 2_2:-37819582 None:intergenic
ATTCTCGAAAGGCTTCAAAC+TGG 0.437747 2_2:+37823483 Msa0250020:CDS
GAAACAGGATCCAAGCCTTT+GGG 0.444806 2_2:-37824081 None:intergenic
ATATTTGTGGAGATTGGAAT+GGG 0.445460 2_2:+37823398 Msa0250020:CDS
AGGTCAAAAGATTTGTAACT+AGG 0.446358 2_2:-37826988 None:intergenic
GTAACTGTCAAGTCAATTCC+GGG 0.448288 2_2:-37826943 None:intergenic
ACAGTTACTGTTCTGACCAC+TGG 0.451735 2_2:+37826958 Msa0250020:CDS
CAGAGTTTGGTGTTAAGGCT+AGG 0.452903 2_2:+37820213 Msa0250020:intron
CGGAGAAAAGGGATATTGTT+GGG 0.453652 2_2:+37825260 Msa0250020:CDS
AACCATAAAATGAGTGGGTA+TGG 0.458748 2_2:+37828480 Msa0250020:three_prime_UTR
CTTACTTGGATTTATTCCTT+GGG 0.459703 2_2:+37827193 Msa0250020:CDS
ATGTCTGCAGCCGGAGAAAA+GGG 0.463275 2_2:+37825249 Msa0250020:intron
ATGTTTGCTCATGTTGGAAA+AGG 0.465005 2_2:+37828273 Msa0250020:three_prime_UTR
ACTCCTCTCATGGTCATCAT+TGG 0.466098 2_2:-37826685 None:intergenic
AGAATATACCTCTAATAACT+TGG 0.467807 2_2:-37823679 None:intergenic
TTCTCATCCACAGGAGGAAG+AGG 0.467931 2_2:-37827748 None:intergenic
GGCGGAGGAGTGCTTGAAAC+GGG 0.472033 2_2:+37823614 Msa0250020:intron
CTCCATATCCAAGTATCGGC+TGG 0.476819 2_2:+37828241 Msa0250020:three_prime_UTR
CTGTAAATGTTTGCTCATGT+TGG 0.476983 2_2:+37828267 Msa0250020:three_prime_UTR
ACAAAATGTGGCAAGCAGTT+CGG 0.477078 2_2:-37825598 None:intergenic
CCGGAGAAAAGGGATATTGT+TGG 0.478111 2_2:+37825259 Msa0250020:CDS
TGTTTCCAGTATATTTAAGC+AGG 0.481609 2_2:+37824098 Msa0250020:CDS
TGGTCAATTTACTTCAAAGA+TGG 0.482034 2_2:+37826737 Msa0250020:CDS
TGGATCGATACTTTATTGCT+CGG 0.482660 2_2:+37823029 Msa0250020:CDS
TATAAATATACCATTTCTGC+AGG 0.482865 2_2:-37827018 None:intergenic
TATTGTTGGGTTACAAGAGC+AGG 0.483324 2_2:+37825273 Msa0250020:CDS
AAATGTATTAGATATATTTG+TGG 0.483791 2_2:+37823385 Msa0250020:CDS
CAAAATTTACAGACAAAATG+AGG 0.486053 2_2:+37827602 Msa0250020:CDS
AATACCTTGAGCATATAATC+AGG 0.490182 2_2:-37823524 None:intergenic
CTTGATCTCTCGAGACTACC+TGG 0.495638 2_2:+37828037 Msa0250020:CDS
AACCGCTGTATGATAAGTAC+AGG 0.495768 2_2:+37820516 Msa0250020:CDS
ATGGAGTGCGTTGAGCAGTT+AGG 0.495951 2_2:+37827877 Msa0250020:CDS
CTCTCAATTTCCTTGAAGGA+AGG 0.497162 2_2:+37828193 Msa0250020:three_prime_UTR
CCATTTCTGCAGGAAGATTG+AGG 0.497896 2_2:-37827008 None:intergenic
AGGTTTACAAGGAAGTAAAT+GGG 0.502271 2_2:+37823207 Msa0250020:intron
AGAGTTTGGTGTTAAGGCTA+GGG 0.502465 2_2:+37820214 Msa0250020:intron
ACTGATTGTGACTACTTACC+AGG 0.504108 2_2:+37827258 Msa0250020:CDS
TTGTTAAAATACTCCTCTCA+TGG 0.505784 2_2:-37826695 None:intergenic
ATGCAGCATGTTACCGAAGA+AGG 0.506218 2_2:+37824237 Msa0250020:intron
TATATTTGTGGAGATTGGAA+TGG 0.508425 2_2:+37823397 Msa0250020:CDS
TACTTCAAAGATGGAAGGAA+TGG 0.516259 2_2:+37826746 Msa0250020:CDS
AGGTACAACGTTGGTGAAGT+TGG 0.516536 2_2:+37824257 Msa0250020:CDS
TAAGTACAGGGAGGCATTTG+AGG 0.519320 2_2:+37820529 Msa0250020:CDS
GATCAGTTCTATAATTAAGT+AGG 0.520022 2_2:+37828299 Msa0250020:three_prime_UTR
TTCTGCATATTATTCTCGAA+AGG 0.520286 2_2:+37823472 Msa0250020:CDS
TGCGAGAACTTGTGAGGAGG+TGG 0.525524 2_2:+37822957 Msa0250020:CDS
GGAGAACCAAACAAGCTTTG+AGG 0.525529 2_2:+37826891 Msa0250020:CDS
TTGGGTACCTGCAATATAAG+TGG 0.526090 2_2:+37827211 Msa0250020:CDS
GGTTGGGAATAGTCATTTGG+AGG 0.527736 2_2:-37820497 None:intergenic
GTACTTATCATACAGCGGTT+GGG 0.527755 2_2:-37820513 None:intergenic
TGTACTTATCATACAGCGGT+TGG 0.527818 2_2:-37820514 None:intergenic
TCCTATTTCCAATATGGGGT+GGG 0.527993 2_2:-37828407 None:intergenic
TTATCAATTCCAGGTTTACA+AGG 0.528929 2_2:+37823196 Msa0250020:intron
CCTGATAAAGGTTTCGGTGA+AGG 0.537083 2_2:-37819570 None:intergenic
TCGTGCTTCTCTCTCAAAGA+AGG 0.537882 2_2:-37822923 None:intergenic
GAGAATATTATCACAAAATG+TGG 0.541209 2_2:-37825610 None:intergenic
TTGTCCTGATTATATGCTCA+AGG 0.542877 2_2:+37823520 Msa0250020:CDS
AGGCGGAGGAGTGCTTGAAA+CGG 0.547934 2_2:+37823613 Msa0250020:intron
AAGTCATCAGATGTGAATGC+AGG 0.552002 2_2:-37828356 None:intergenic
AGTAGTCACAATCAGTTCCA+TGG 0.552172 2_2:-37827251 None:intergenic
TATTGATTTAGAACAAGGAT+GGG 0.552691 2_2:+37820261 Msa0250020:CDS
GCAGATTCCTCTTCCTCCTG+TGG 0.555922 2_2:+37827741 Msa0250020:intron
CTATTGATTTAGAACAAGGA+TGG 0.556296 2_2:+37820260 Msa0250020:CDS
GAATATACCTCTAATAACTT+GGG 0.556355 2_2:-37823678 None:intergenic
TTCCTATTTCCAATATGGGG+TGG 0.557692 2_2:-37828408 None:intergenic
AGACAAAATGAGGAGGATCA+AGG 0.560398 2_2:+37827612 Msa0250020:CDS
GTGGGCTAACCATAAAATCA+TGG 0.561200 2_2:+37822976 Msa0250020:CDS
CTTCATAATACGCACAATTG+AGG 0.561336 2_2:-37827821 None:intergenic
ACTTATATTGCAGGTACCCA+AGG 0.565881 2_2:-37827209 None:intergenic
CGCACTCCATCACTAACTGT+TGG 0.568475 2_2:-37827864 None:intergenic
CTTCACCGAAACCTTTATCA+GGG 0.570432 2_2:+37819571 Msa0250020:five_prime_UTR
AACAGTCGTTCACATATGCC+AGG 0.571635 2_2:-37825419 None:intergenic
AATTGAAGAAACACTTGAGA+AGG 0.575640 2_2:+37825668 Msa0250020:CDS
CTTAGGTTGAAGACTTGTCA+AGG 0.575826 2_2:+37824034 Msa0250020:intron
TGCAGAAGTGTCTTTGAGCA+TGG 0.576831 2_2:-37823456 None:intergenic
TGGGCTCGCTACTAGAGTGC+AGG 0.577235 2_2:-37823659 None:intergenic
TACAGATTTGACACTGGCAA+AGG 0.577327 2_2:+37826870 Msa0250020:CDS
AAATTACCAACAGTTAGTGA+TGG 0.577805 2_2:+37827858 Msa0250020:CDS
AAGCTGAAGAATATTCTGGA+AGG 0.583829 2_2:+37820307 Msa0250020:CDS
CAAGTACAAGATTCTTAACA+AGG 0.590535 2_2:+37827531 Msa0250020:CDS
CAATTTACTTCAAAGATGGA+AGG 0.590929 2_2:+37826741 Msa0250020:CDS
CTTGAAACGGGAGAAAGATA+GGG 0.592854 2_2:+37823626 Msa0250020:CDS
AGAACATACAAGAGAAATCA+CGG 0.593996 2_2:-37823243 None:intergenic
CAATTCCTATTTCCAATATG+GGG 0.598728 2_2:-37828411 None:intergenic
AGGGATTATCGATGAGTGAA+CGG 0.601104 2_2:+37820233 Msa0250020:exon
TTAAATTCAAAATAATCGGT+AGG 0.601478 2_2:-37827577 None:intergenic
AGCTGAAGAATATTCTGGAA+GGG 0.602844 2_2:+37820308 Msa0250020:CDS
GTCAGCCCAACTTCATTAAG+CGG 0.606052 2_2:-37823064 None:intergenic
AAGATTGATCAAGAACGTGA+AGG 0.609119 2_2:+37823335 Msa0250020:intron
AGATGCAGCAAGTAACAAGA+AGG 0.609700 2_2:+37824284 Msa0250020:CDS
GCAGATAGCAAAACAAGATG+AGG 0.611050 2_2:+37828140 Msa0250020:three_prime_UTR
AAGACTATTGATTTAGAACA+AGG 0.613435 2_2:+37820256 Msa0250020:CDS
TGGGTACCTGCAATATAAGT+GGG 0.615117 2_2:+37827212 Msa0250020:CDS
AGTTATTGAGGATGTTGACA+AGG 0.621478 2_2:+37827777 Msa0250020:CDS
TTATGTTGCGAGAACTTGTG+AGG 0.624498 2_2:+37822951 Msa0250020:CDS
AATAATCCTAATGTAGACCC+CGG 0.627294 2_2:+37826925 Msa0250020:CDS
GATAATATTCTCAAGAAAGG+CGG 0.632646 2_2:+37825621 Msa0250020:CDS
TGCATTACTTAGAGATGACA+AGG 0.635739 2_2:+37823932 Msa0250020:CDS
AGAATAACTCAGTCTATCTG+AGG 0.636581 2_2:-37827440 None:intergenic
ATCGATACTTTATTGCTCGG+AGG 0.640352 2_2:+37823032 Msa0250020:CDS
ACAAAATTGAAGCAACAATG+TGG 0.645513 2_2:+37826714 Msa0250020:CDS
TTGTGCGTATTATGAAGAGT+CGG 0.646014 2_2:+37827827 Msa0250020:CDS
GCGTATTATGAAGAGTCGGA+AGG 0.646046 2_2:+37827831 Msa0250020:CDS
TATCCTATAGGCTCTTAAGG+AGG 0.649623 2_2:+37825530 Msa0250020:intron
ATGTCAAGGCAATTAAGAAG+CGG 0.652248 2_2:+37828006 Msa0250020:CDS
AGCCCAACTTCATTAAGCGG+AGG 0.655556 2_2:-37823061 None:intergenic
TGAGCTGCATGACAAGTACC+TGG 0.655887 2_2:+37825401 Msa0250020:CDS
AAATATATACCTTAAACATG+CGG 0.656922 2_2:-37827900 None:intergenic
ATAGCAAAACAAGATGAGGA+TGG 0.657624 2_2:+37828144 Msa0250020:three_prime_UTR
GTTTGCGCAGCCTGATGTCA+AGG 0.659356 2_2:+37827992 Msa0250020:intron
TATTTGTGGAGATTGGAATG+GGG 0.661334 2_2:+37823399 Msa0250020:CDS
TCAGGTTACAGATTTGACAC+TGG 0.667474 2_2:+37826864 Msa0250020:intron
GCGAGAACTTGTGAGGAGGT+GGG 0.667854 2_2:+37822958 Msa0250020:CDS
GTGCCAATGATGACCATGAG+AGG 0.678765 2_2:+37826682 Msa0250020:CDS
TCCCTGTACTTATCATACAG+CGG 0.679899 2_2:-37820518 None:intergenic
AAATTGAAGCAACAATGTGG+TGG 0.685406 2_2:+37826717 Msa0250020:CDS
CGCAACGCACCATAGAAGTG+AGG 0.687081 2_2:-37828517 None:intergenic
TGAACCTCAGTTCAGCTCTG+AGG 0.696799 2_2:+37820336 Msa0250020:CDS
TGTTGCGAGAACTTGTGAGG+AGG 0.698023 2_2:+37822954 Msa0250020:CDS
ACCGCTGTATGATAAGTACA+GGG 0.699917 2_2:+37820517 Msa0250020:CDS
TAGTCCTCAGAGCTGAACTG+AGG 0.701236 2_2:-37820340 None:intergenic
AATTTACAGACAAAATGAGG+AGG 0.707626 2_2:+37827605 Msa0250020:CDS
GTAACTAGGCCAGAAACCAG+TGG 0.710105 2_2:-37826974 None:intergenic
GAATCATACTCTATTCCACA+AGG 0.714768 2_2:+37825446 Msa0250020:CDS
TACCGAAGAAGGTACAACGT+TGG 0.733065 2_2:+37824248 Msa0250020:CDS
TAACTGTCAAGTCAATTCCG+GGG 0.734741 2_2:-37826942 None:intergenic
GCTGTATGATAAGTACAGGG+AGG 0.780823 2_2:+37820520 Msa0250020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTAAAATTTTTAT+TGG + chr2_2:37819792-37819811 Msa0250020:intron 0.0%
!!! TTATCATTATTTTGATTTTT+TGG + chr2_2:37820104-37820123 Msa0250020:intron 10.0%
!!! TGTTTTAGTTTTATATTAAT+TGG + chr2_2:37820394-37820413 Msa0250020:intron 10.0%
!!! GTTTTAGTTTTATATTAATT+GGG + chr2_2:37820395-37820414 Msa0250020:intron 10.0%
!! TTTGTAAAAAAAAAAAATAC+CGG + chr2_2:37821611-37821630 Msa0250020:intron 10.0%
!! TGAATTAAATTCAAAATAAT+CGG - chr2_2:37827584-37827603 None:intergenic 10.0%
!!! TTGATTTTTTGGTTTAAATT+TGG + chr2_2:37820115-37820134 Msa0250020:intron 15.0%
!!! TTTTGTTTGTTTTGATTTTT+TGG + chr2_2:37820142-37820161 Msa0250020:intron 15.0%
!!! ATGTCTATTTTTTACATTAT+AGG + chr2_2:37820832-37820851 Msa0250020:intron 15.0%
!!! TGTCTATTTTTTACATTATA+GGG + chr2_2:37820833-37820852 Msa0250020:intron 15.0%
!! TTGTAAAAAAAAAAAATACC+GGG + chr2_2:37821612-37821631 Msa0250020:intron 15.0%
!!! ATGAAATGATTTATTTTTCT+TGG + chr2_2:37822710-37822729 Msa0250020:intron 15.0%
!!! TGAAATGATTTATTTTTCTT+GGG + chr2_2:37822711-37822730 Msa0250020:intron 15.0%
!!! TTTTTTTTTTTATCAATTCC+AGG + chr2_2:37823187-37823206 Msa0250020:intron 15.0%
!! AAATGTATTAGATATATTTG+TGG + chr2_2:37823385-37823404 Msa0250020:CDS 15.0%
!!! GAAATTATAATTTTCAACTT+AGG + chr2_2:37824526-37824545 Msa0250020:intron 15.0%
!!! AAGACTTCTATATAATTTTA+AGG + chr2_2:37824897-37824916 Msa0250020:intron 15.0%
!!! ATAATTTTAAGGATTCATTA+AGG + chr2_2:37824908-37824927 Msa0250020:intron 15.0%
!!! TAATTTTAAGGATTCATTAA+GGG + chr2_2:37824909-37824928 Msa0250020:intron 15.0%
!! AAAAATGAAAAAAAGATCTT+GGG - chr2_2:37826042-37826061 None:intergenic 15.0%
!! AAAAAATGAAAAAAAGATCT+TGG - chr2_2:37826043-37826062 None:intergenic 15.0%
!!! AATACTTTTTATCTAAATCT+AGG - chr2_2:37827084-37827103 None:intergenic 15.0%
!!! TTTATTGGTTAGTTGAATTT+TGG + chr2_2:37819807-37819826 Msa0250020:intron 20.0%
!!! TTGATTGTTTAGTTGAATTT+TGG + chr2_2:37819938-37819957 Msa0250020:intron 20.0%
!!! TGATTGTTTAGTTGAATTTT+GGG + chr2_2:37819939-37819958 Msa0250020:intron 20.0%
!!! TTTCATTGTTGTTGAAATTT+AGG + chr2_2:37819996-37820015 Msa0250020:intron 20.0%
!! TTGAAATTTAGGAACAATTA+GGG + chr2_2:37820007-37820026 Msa0250020:intron 20.0%
!!! TTGATTTTTTGGTTGAAATT+TGG + chr2_2:37820153-37820172 Msa0250020:intron 20.0%
!!! TTTATGTTTTAACGAATTTG+TGG + chr2_2:37820179-37820198 Msa0250020:intron 20.0%
!!! AATTTAAAATACAATCAGAC+AGG - chr2_2:37820614-37820633 None:intergenic 20.0%
!!! ATTATTTCTTAATCTGGATT+GGG + chr2_2:37821677-37821696 Msa0250020:intron 20.0%
!! ATGTATTCTTATTGTGTAAA+TGG + chr2_2:37821974-37821993 Msa0250020:intron 20.0%
!!! TTATGATTTAAGACAGAATT+GGG - chr2_2:37822368-37822387 None:intergenic 20.0%
!! TTAGTTAACTTACTAATAGT+TGG + chr2_2:37822445-37822464 Msa0250020:intron 20.0%
!!! GAAATGATTTATTTTTCTTG+GGG + chr2_2:37822712-37822731 Msa0250020:intron 20.0%
!!! AAATGATTTATTTTTCTTGG+GGG + chr2_2:37822713-37822732 Msa0250020:intron 20.0%
!! TACATAATCAAAGGAAAAAA+CGG - chr2_2:37822833-37822852 None:intergenic 20.0%
!! ATTAACAGATACATAATCAA+AGG - chr2_2:37822842-37822861 None:intergenic 20.0%
!!! ATAACTGAAATTCACTTTTT+GGG + chr2_2:37822888-37822907 Msa0250020:intron 20.0%
!! AAACAGAAGCTAAATAATAT+TGG - chr2_2:37823573-37823592 None:intergenic 20.0%
!! ACATTTCACAAAGAAAAAAA+AGG - chr2_2:37823834-37823853 None:intergenic 20.0%
!!! ATTTTGACAACATATATAGA+AGG - chr2_2:37824153-37824172 None:intergenic 20.0%
!! TCTATATATGTTGTCAAAAT+TGG + chr2_2:37824153-37824172 Msa0250020:intron 20.0%
!! CTATATATGTTGTCAAAATT+GGG + chr2_2:37824154-37824173 Msa0250020:intron 20.0%
!! TATATATGTTGTCAAAATTG+GGG + chr2_2:37824155-37824174 Msa0250020:intron 20.0%
!!! TGATTGATAATTTTCAACTT+AGG + chr2_2:37824460-37824479 Msa0250020:intron 20.0%
!!! TGTATATTATTTTCTGTTAC+TGG + chr2_2:37824483-37824502 Msa0250020:intron 20.0%
!!! AAGATTATTACTATTTTGCT+TGG - chr2_2:37824825-37824844 None:intergenic 20.0%
!! ATTCATTAAGGGAATATAAA+AGG + chr2_2:37824920-37824939 Msa0250020:intron 20.0%
!! TATTATAAACATAAACTGTG+GGG - chr2_2:37825080-37825099 None:intergenic 20.0%
!! CTATTATAAACATAAACTGT+GGG - chr2_2:37825081-37825100 None:intergenic 20.0%
!! TTGCAGTTAAACTATAAAAT+TGG - chr2_2:37825314-37825333 None:intergenic 20.0%
!! AATTGATATTGATCCATTTA+TGG + chr2_2:37825332-37825351 Msa0250020:intron 20.0%
!!! ATTTCTTTTTATCTATTTGC+AGG + chr2_2:37825756-37825775 Msa0250020:intron 20.0%
!!! TGTTGTTTACCTATAAAATT+CGG - chr2_2:37825824-37825843 None:intergenic 20.0%
!! TGATAATAGAAATCTCATAT+TGG - chr2_2:37826013-37826032 None:intergenic 20.0%
!! AAAATGAAAAAAAGATCTTG+GGG - chr2_2:37826041-37826060 None:intergenic 20.0%
!!! AATTTTTATTTAGCCCTTTA+AGG - chr2_2:37826142-37826161 None:intergenic 20.0%
!!! GAAAAACTATTAAAAGCATA+TGG - chr2_2:37826274-37826293 None:intergenic 20.0%
!!! ATTTTTGGAAAAGAAAAAAC+TGG + chr2_2:37826330-37826349 Msa0250020:intron 20.0%
!! AAAATACAAACAAAACTGTA+AGG - chr2_2:37826451-37826470 None:intergenic 20.0%
!! AGAAAATTCCATTGTTTATT+TGG + chr2_2:37826835-37826854 Msa0250020:intron 20.0%
!! GAAAATTCCATTGTTTATTT+GGG + chr2_2:37826836-37826855 Msa0250020:intron 20.0%
!!! CTGTTCTCTTTATTTATTTT+AGG + chr2_2:37827114-37827133 Msa0250020:intron 20.0%
!! TTAAATTCAAAATAATCGGT+AGG - chr2_2:37827580-37827599 None:intergenic 20.0%
!! AAATATATACCTTAAACATG+CGG - chr2_2:37827903-37827922 None:intergenic 20.0%
!! TTAAAAACCATAAAATGAGT+GGG + chr2_2:37828475-37828494 Msa0250020:three_prime_UTR 20.0%
!!! GATTTGTTTTGTTATGCTTA+TGG + chr2_2:37819655-37819674 Msa0250020:intron 25.0%
!!! TGGTTTTGTTATACTAGATT+TGG + chr2_2:37819675-37819694 Msa0250020:intron 25.0%
! TTGGTTAAATCTGAGAATTT+AGG + chr2_2:37819694-37819713 Msa0250020:intron 25.0%
! TGGTTAAATCTGAGAATTTA+GGG + chr2_2:37819695-37819714 Msa0250020:intron 25.0%
! ATGTTTATTGCGATTTCATT+CGG + chr2_2:37819744-37819763 Msa0250020:intron 25.0%
!!! GGAATTTGATTTGAGAATTT+AGG + chr2_2:37819828-37819847 Msa0250020:intron 25.0%
!! TGAGAATTTAGGATTTAGTT+TGG + chr2_2:37819839-37819858 Msa0250020:intron 25.0%
!! GAGAATTTAGGATTTAGTTT+GGG + chr2_2:37819840-37819859 Msa0250020:intron 25.0%
!!! AGAATTTAGGATTTAGTTTG+GGG + chr2_2:37819841-37819860 Msa0250020:intron 25.0%
! GTTGAAATTTAGGAACAATT+AGG + chr2_2:37820006-37820025 Msa0250020:intron 25.0%
! TGAAATTTAGGAACAATTAG+GGG + chr2_2:37820008-37820027 Msa0250020:intron 25.0%
! TTAACGAATTTGTGGAAATT+TGG + chr2_2:37820187-37820206 Msa0250020:intron 25.0%
!!! AAGACTATTGATTTAGAACA+AGG + chr2_2:37820256-37820275 Msa0250020:CDS 25.0%
!!! TATTGATTTAGAACAAGGAT+GGG + chr2_2:37820261-37820280 Msa0250020:CDS 25.0%
!! TTTTTACATTATAGGGCTAT+TGG + chr2_2:37820840-37820859 Msa0250020:intron 25.0%
!! TCCTCAACAAAATAATGTTT+TGG + chr2_2:37821034-37821053 Msa0250020:intron 25.0%
!!! TCCAAAACATTATTTTGTTG+AGG - chr2_2:37821038-37821057 None:intergenic 25.0%
!!! TTGATTTTTGAGTAAGTAGT+TGG + chr2_2:37821094-37821113 Msa0250020:intron 25.0%
!! GATTATTTCTTAATCTGGAT+TGG + chr2_2:37821676-37821695 Msa0250020:intron 25.0%
! CTGCTTCAATTTAGAAAAAT+AGG - chr2_2:37821725-37821744 None:intergenic 25.0%
!!! TGGGTTTTATTTATATAACC+TGG - chr2_2:37821754-37821773 None:intergenic 25.0%
! AGGTTATATAAATAAAACCC+AGG + chr2_2:37821753-37821772 Msa0250020:intron 25.0%
!!! GTACACTTTTTCGTATTAAT+AGG + chr2_2:37822161-37822180 Msa0250020:intron 25.0%
!! CTTATGATTTAAGACAGAAT+TGG - chr2_2:37822369-37822388 None:intergenic 25.0%
!! CTTTTAGGCAGTAATAAAAA+AGG - chr2_2:37822628-37822647 None:intergenic 25.0%
!!! AATGATTTATTTTTCTTGGG+GGG + chr2_2:37822714-37822733 Msa0250020:intron 25.0%
!!! CATAACTGAAATTCACTTTT+TGG + chr2_2:37822887-37822906 Msa0250020:intron 25.0%
! ATCTTTAAACAAAAGAGGAT+AGG - chr2_2:37823320-37823339 None:intergenic 25.0%
! GATCAATCTTTAAACAAAAG+AGG - chr2_2:37823325-37823344 None:intergenic 25.0%
! TTAGATATATTTGTGGAGAT+TGG + chr2_2:37823392-37823411 Msa0250020:CDS 25.0%
! TTAGCTTCTGTTTAATATTG+TGG + chr2_2:37823580-37823599 Msa0250020:intron 25.0%
! GAATATACCTCTAATAACTT+GGG - chr2_2:37823681-37823700 None:intergenic 25.0%
! AGAATATACCTCTAATAACT+TGG - chr2_2:37823682-37823701 None:intergenic 25.0%
!!! AATGTTCTTTTTCAAGAAGT+TGG - chr2_2:37823902-37823921 None:intergenic 25.0%
! ATTGTAACACAAATTTGAAC+AGG - chr2_2:37824414-37824433 None:intergenic 25.0%
! AAATGACACTAAATATGACA+AGG - chr2_2:37824608-37824627 None:intergenic 25.0%
! TGTTTACGCATAAATTCAAA+AGG + chr2_2:37824771-37824790 Msa0250020:intron 25.0%
!! GCTTGGTAATAACATTTATA+AGG - chr2_2:37824808-37824827 None:intergenic 25.0%
! ATTATAAACATAAACTGTGG+GGG - chr2_2:37825079-37825098 None:intergenic 25.0%
! CCTATTATAAACATAAACTG+TGG - chr2_2:37825082-37825101 None:intergenic 25.0%
! CCACAGTTTATGTTTATAAT+AGG + chr2_2:37825079-37825098 Msa0250020:intron 25.0%
!! AAAGAAAATTTTGTCCGATA+AGG - chr2_2:37825116-37825135 None:intergenic 25.0%
! ATGTAAAGCACAAAATCAAA+CGG - chr2_2:37825181-37825200 None:intergenic 25.0%
!! TCTGAAAGATTTTATCCTAT+AGG + chr2_2:37825518-37825537 Msa0250020:intron 25.0%
!!! TTTTGAGATATTTTGCAACA+AGG + chr2_2:37825554-37825573 Msa0250020:CDS 25.0%
!!! TTTGAGATATTTTGCAACAA+GGG + chr2_2:37825555-37825574 Msa0250020:CDS 25.0%
! GAGAATATTATCACAAAATG+TGG - chr2_2:37825613-37825632 None:intergenic 25.0%
! TGTGATAATATTCTCAAGAA+AGG + chr2_2:37825618-37825637 Msa0250020:CDS 25.0%
! AATCATCAAGTTTAAGCATA+TGG - chr2_2:37825719-37825738 None:intergenic 25.0%
!! ATTTGTTTGCCGAATTTTAT+AGG + chr2_2:37825812-37825831 Msa0250020:CDS 25.0%
! ATAGGTAAACAACATAGAAA+AGG + chr2_2:37825830-37825849 Msa0250020:intron 25.0%
! TCCAAAAGATTTAAACCATT+TGG + chr2_2:37825940-37825959 Msa0250020:intron 25.0%
!! TCCAAATGGTTTAAATCTTT+TGG - chr2_2:37825944-37825963 None:intergenic 25.0%
! ATCTCATATTGGACAAAATA+GGG - chr2_2:37826002-37826021 None:intergenic 25.0%
! AATCTCATATTGGACAAAAT+AGG - chr2_2:37826003-37826022 None:intergenic 25.0%
! AAATGAAAAAAAGATCTTGG+GGG - chr2_2:37826040-37826059 None:intergenic 25.0%
!!! GAAAGTCGATAGTTATTTTT+GGG + chr2_2:37826111-37826130 Msa0250020:intron 25.0%
!!! AAAGTCGATAGTTATTTTTG+GGG + chr2_2:37826112-37826131 Msa0250020:intron 25.0%
!!! TTTGCTGTTCTGTTAATATA+AGG + chr2_2:37826367-37826386 Msa0250020:intron 25.0%
! ATGACATTGTTGAATCTTTA+TGG + chr2_2:37826480-37826499 Msa0250020:intron 25.0%
! TATAAATATACCATTTCTGC+AGG - chr2_2:37827021-37827040 None:intergenic 25.0%
! TATGCATAAGAAATATAACC+TGG - chr2_2:37827279-37827298 None:intergenic 25.0%
! GATATGTACAAATTCTTGTA+TGG + chr2_2:37827348-37827367 Msa0250020:intron 25.0%
!!! GTTGTGTTTTGCTTTTTAAT+AGG + chr2_2:37827393-37827412 Msa0250020:intron 25.0%
! CAAAATTTACAGACAAAATG+AGG + chr2_2:37827602-37827621 Msa0250020:CDS 25.0%
! TGAGAAGAAAAAAGTTATTG+AGG + chr2_2:37827765-37827784 Msa0250020:CDS 25.0%
! ACAAAACAATGTCATAAAAG+GGG - chr2_2:37827928-37827947 None:intergenic 25.0%
! GACAAAACAATGTCATAAAA+GGG - chr2_2:37827929-37827948 None:intergenic 25.0%
!!! CTTTTATGACATTGTTTTGT+CGG + chr2_2:37827928-37827947 Msa0250020:intron 25.0%
! TATAATCCTGAATTGTGATA+TGG + chr2_2:37827962-37827981 Msa0250020:intron 25.0%
! GATCAGTTCTATAATTAAGT+AGG + chr2_2:37828299-37828318 Msa0250020:three_prime_UTR 25.0%
! CTTAAAAACCATAAAATGAG+TGG + chr2_2:37828474-37828493 Msa0250020:three_prime_UTR 25.0%
! TGAGAATTTAGGGTTTAGTT+TGG + chr2_2:37819705-37819724 Msa0250020:intron 30.0%
! GAGAATTTAGGGTTTAGTTT+GGG + chr2_2:37819706-37819725 Msa0250020:intron 30.0%
!! AGAATTTAGGGTTTAGTTTG+GGG + chr2_2:37819707-37819726 Msa0250020:intron 30.0%
!! GAATTTAGGATTTAGTTTGG+GGG + chr2_2:37819842-37819861 Msa0250020:intron 30.0%
!! AATTTAGGATTTAGTTTGGG+GGG + chr2_2:37819843-37819862 Msa0250020:intron 30.0%
TTACTGCAATTTCATTCAGT+TGG + chr2_2:37819884-37819903 Msa0250020:intron 30.0%
!! CTATTGATTTAGAACAAGGA+TGG + chr2_2:37820260-37820279 Msa0250020:CDS 30.0%
! TTGTTTGCAACTTTTCTACT+AGG + chr2_2:37820757-37820776 Msa0250020:intron 30.0%
! TGTTTGCAACTTTTCTACTA+GGG + chr2_2:37820758-37820777 Msa0250020:intron 30.0%
! TGACGCATTTTCTTCTTTTT+AGG + chr2_2:37820941-37820960 Msa0250020:intron 30.0%
!! AAAGTAGTTGGTAGCAAAAA+GGG - chr2_2:37821314-37821333 None:intergenic 30.0%
! AATAGTGGTTTGTCCAAATT+CGG + chr2_2:37821553-37821572 Msa0250020:intron 30.0%
! TTTTCTAAATTGAAGCAGCT+TGG + chr2_2:37821727-37821746 Msa0250020:intron 30.0%
!!! CCGTTTTCATTTTAAAACCT+GGG - chr2_2:37821773-37821792 None:intergenic 30.0%
!!! CCCAGGTTTTAAAATGAAAA+CGG + chr2_2:37821770-37821789 Msa0250020:intron 30.0%
!!! TCCGTTTTCATTTTAAAACC+TGG - chr2_2:37821774-37821793 None:intergenic 30.0%
!!! GGTTTTAAAATGAAAACGGA+AGG + chr2_2:37821774-37821793 Msa0250020:intron 30.0%
AAGTAACTGAACTAAAACAG+AGG - chr2_2:37821948-37821967 None:intergenic 30.0%
TCATGTTCTTCATGAACTTA+TGG + chr2_2:37822023-37822042 Msa0250020:intron 30.0%
! TGATCCAGATCTCTAAATTT+TGG + chr2_2:37822259-37822278 Msa0250020:intron 30.0%
GATTCCAAAATTTAGAGATC+TGG - chr2_2:37822266-37822285 None:intergenic 30.0%
TAACTAAAGCTAGTTAGAGA+GGG - chr2_2:37822432-37822451 None:intergenic 30.0%
TTAACTAAAGCTAGTTAGAG+AGG - chr2_2:37822433-37822452 None:intergenic 30.0%
TTATAGCGTCATTAGTTGAT+TGG + chr2_2:37822530-37822549 Msa0250020:intron 30.0%
TGTGTCTCTTAAAATTTGAC+TGG + chr2_2:37822581-37822600 Msa0250020:intron 30.0%
ACCATAAAATCATGGTTAGA+TGG + chr2_2:37822984-37823003 Msa0250020:CDS 30.0%
TTCTCGTTTCTTTCACTATT+TGG + chr2_2:37823009-37823028 Msa0250020:CDS 30.0%
CTACTAATAGAAAACTCTGA+AGG - chr2_2:37823122-37823141 None:intergenic 30.0%
TTATCAATTCCAGGTTTACA+AGG + chr2_2:37823196-37823215 Msa0250020:intron 30.0%
AGGTTTACAAGGAAGTAAAT+GGG + chr2_2:37823207-37823226 Msa0250020:intron 30.0%
AGAACATACAAGAGAAATCA+CGG - chr2_2:37823246-37823265 None:intergenic 30.0%
TATATTTGTGGAGATTGGAA+TGG + chr2_2:37823397-37823416 Msa0250020:CDS 30.0%
ATATTTGTGGAGATTGGAAT+GGG + chr2_2:37823398-37823417 Msa0250020:CDS 30.0%
TTCTGCATATTATTCTCGAA+AGG + chr2_2:37823472-37823491 Msa0250020:CDS 30.0%
AATACCTTGAGCATATAATC+AGG - chr2_2:37823527-37823546 None:intergenic 30.0%
AATATTGTGGCATTCATTAC+AGG + chr2_2:37823593-37823612 Msa0250020:intron 30.0%
! TTGCTATTATTCCAGCTATT+TGG + chr2_2:37823701-37823720 Msa0250020:intron 30.0%
CTTCTTGAAAAAGAACATTC+TGG + chr2_2:37823903-37823922 Msa0250020:CDS 30.0%
GGTACTATTTAAGCGTAATA+TGG + chr2_2:37823953-37823972 Msa0250020:intron 30.0%
TCTTCAACCTAAGCATTTAA+AGG - chr2_2:37824027-37824046 None:intergenic 30.0%
!!! CTCTTTTCTAAAATACCCAA+AGG + chr2_2:37824066-37824085 Msa0250020:CDS 30.0%
TGCTTAAATATACTGGAAAC+AGG - chr2_2:37824099-37824118 None:intergenic 30.0%
TGTTTCCAGTATATTTAAGC+AGG + chr2_2:37824098-37824117 Msa0250020:CDS 30.0%
! TTTGTAGTTGTCCTTATTTC+TGG + chr2_2:37824318-37824337 Msa0250020:intron 30.0%
! CTTTTCTATTGCAATAATCG+AGG + chr2_2:37824353-37824372 Msa0250020:intron 30.0%
AAAACTAGTACCGCAATAAT+CGG + chr2_2:37824376-37824395 Msa0250020:intron 30.0%
! TTTACACAGAGTGTTAAGAT+AGG - chr2_2:37824693-37824712 None:intergenic 30.0%
TCTTAACACTCTGTGTAAAT+TGG + chr2_2:37824694-37824713 Msa0250020:intron 30.0%
TTATAAACATAAACTGTGGG+GGG - chr2_2:37825078-37825097 None:intergenic 30.0%
GGTAAATTGTTTGCAAAATG+AGG - chr2_2:37825151-37825170 None:intergenic 30.0%
TAAATTAAAATGTCTGCAGC+CGG + chr2_2:37825240-37825259 Msa0250020:intron 30.0%
ATTATACGATCATAACCTTG+TGG - chr2_2:37825464-37825483 None:intergenic 30.0%
! TTTTATCCTATAGGCTCTTA+AGG + chr2_2:37825527-37825546 Msa0250020:intron 30.0%
GATAATATTCTCAAGAAAGG+CGG + chr2_2:37825621-37825640 Msa0250020:CDS 30.0%
AATTGAAGAAACACTTGAGA+AGG + chr2_2:37825668-37825687 Msa0250020:CDS 30.0%
ACAAAATAGGGAAAACTAAC+GGG - chr2_2:37825990-37826009 None:intergenic 30.0%
GACAAAATAGGGAAAACTAA+CGG - chr2_2:37825991-37826010 None:intergenic 30.0%
!! GGAAAGTCGATAGTTATTTT+TGG + chr2_2:37826110-37826129 Msa0250020:intron 30.0%
!! ATTTTTGGGGAAAACCTTAA+AGG + chr2_2:37826125-37826144 Msa0250020:intron 30.0%
!! TTTTTGGGGAAAACCTTAAA+GGG + chr2_2:37826126-37826145 Msa0250020:intron 30.0%
GATATTAAAAGAGATAGCGA+TGG + chr2_2:37826167-37826186 Msa0250020:intron 30.0%
GAAAGTGAACTGCAATTAAT+TGG + chr2_2:37826211-37826230 Msa0250020:intron 30.0%
!!! GCAGACTGTTTTAGAATTTT+TGG + chr2_2:37826315-37826334 Msa0250020:intron 30.0%
GGAAAAGAAAAAACTGGATA+TGG + chr2_2:37826336-37826355 Msa0250020:intron 30.0%
TAATTAACCGAAACCCAAAA+AGG - chr2_2:37826423-37826442 None:intergenic 30.0%
TTATGAAAGTGAGTTCCATT+AGG - chr2_2:37826589-37826608 None:intergenic 30.0%
ATAATATCATACATCTTGCC+TGG + chr2_2:37826614-37826633 Msa0250020:intron 30.0%
TTGTTAAAATACTCCTCTCA+TGG - chr2_2:37826698-37826717 None:intergenic 30.0%
ACAAAATTGAAGCAACAATG+TGG + chr2_2:37826714-37826733 Msa0250020:CDS 30.0%
TGGTCAATTTACTTCAAAGA+TGG + chr2_2:37826737-37826756 Msa0250020:CDS 30.0%
CAATTTACTTCAAAGATGGA+AGG + chr2_2:37826741-37826760 Msa0250020:CDS 30.0%
GATAGAACCCAAATAAACAA+TGG - chr2_2:37826846-37826865 None:intergenic 30.0%
! TTGTTTATTTGGGTTCTATC+AGG + chr2_2:37826846-37826865 Msa0250020:intron 30.0%
! AATATTCCTCAAAGCTTGTT+TGG - chr2_2:37826900-37826919 None:intergenic 30.0%
AGGTCAAAAGATTTGTAACT+AGG - chr2_2:37826991-37827010 None:intergenic 30.0%
AGATACTATCGAACATTTCT+GGG - chr2_2:37827059-37827078 None:intergenic 30.0%
TAGATACTATCGAACATTTC+TGG - chr2_2:37827060-37827079 None:intergenic 30.0%
! TAAGTGTGTAGAAGTTTTCA+AGG + chr2_2:37827138-37827157 Msa0250020:CDS 30.0%
ACTTACTTGGATTTATTCCT+TGG + chr2_2:37827192-37827211 Msa0250020:CDS 30.0%
CTTACTTGGATTTATTCCTT+GGG + chr2_2:37827193-37827212 Msa0250020:CDS 30.0%
AAATTTCCCACTTATATTGC+AGG - chr2_2:37827221-37827240 None:intergenic 30.0%
GAAATTTGAACCAAAAACCA+TGG + chr2_2:37827234-37827253 Msa0250020:CDS 30.0%
TGGATTTATCTTTACTTACC+CGG + chr2_2:37827368-37827387 Msa0250020:intron 30.0%
AAAAAGCAAAACACAACATC+CGG - chr2_2:37827390-37827409 None:intergenic 30.0%
!! ACTGAGTTATTCTGAGATAA+TGG + chr2_2:37827450-37827469 Msa0250020:CDS 30.0%
CTTGTTAAGAATCTTGTACT+TGG - chr2_2:37827533-37827552 None:intergenic 30.0%
CAAGTACAAGATTCTTAACA+AGG + chr2_2:37827531-37827550 Msa0250020:CDS 30.0%
AATTTACAGACAAAATGAGG+AGG + chr2_2:37827605-37827624 Msa0250020:CDS 30.0%
!!! CGTAATTATTTTAGTCTCTG+TGG + chr2_2:37827678-37827697 Msa0250020:intron 30.0%
AAATTACCAACAGTTAGTGA+TGG + chr2_2:37827858-37827877 Msa0250020:CDS 30.0%
CGACAAAACAATGTCATAAA+AGG - chr2_2:37827930-37827949 None:intergenic 30.0%
CATTATCCATATCACAATTC+AGG - chr2_2:37827971-37827990 None:intergenic 30.0%
! TGCAAATTTGTTCAAGTACT+TGG + chr2_2:37828076-37828095 Msa0250020:CDS 30.0%
! TTTTCTCCATATCCAAGTAT+CGG + chr2_2:37828237-37828256 Msa0250020:three_prime_UTR 30.0%
TATAATTAAGTAGGCCTAGA+TGG + chr2_2:37828308-37828327 Msa0250020:three_prime_UTR 30.0%
CAGGCAATAAAAAACCAAAA+AGG - chr2_2:37828340-37828359 None:intergenic 30.0%
CAATTCCTATTTCCAATATG+GGG - chr2_2:37828414-37828433 None:intergenic 30.0%
GCAATTCCTATTTCCAATAT+GGG - chr2_2:37828415-37828434 None:intergenic 30.0%
! TTGCGTTACTTTAGTTTAAG+TGG + chr2_2:37828431-37828450 Msa0250020:three_prime_UTR 30.0%
AGAAACCCTGATAAAGGTTT+CGG - chr2_2:37819579-37819598 None:intergenic 35.0%
AGTAAGAGAAACCCTGATAA+AGG - chr2_2:37819585-37819604 None:intergenic 35.0%
CACGATTCTTTACCGAAAAA+GGG + chr2_2:37819616-37819635 Msa0250020:five_prime_UTR 35.0%
! GAGATAAACGTACCCTTTTT+CGG - chr2_2:37819631-37819650 None:intergenic 35.0%
TTATTGCGATTTCATTCGGT+AGG + chr2_2:37819748-37819767 Msa0250020:intron 35.0%
CAATTTCATTCAGTTGGAGT+TGG + chr2_2:37819890-37819909 Msa0250020:intron 35.0%
ATTTAGGAACAATTAGGGGT+TGG + chr2_2:37820012-37820031 Msa0250020:intron 35.0%
TTTAGGAACAATTAGGGGTT+GGG + chr2_2:37820013-37820032 Msa0250020:intron 35.0%
ACAGAAGCTGAAGAATATTC+TGG + chr2_2:37820303-37820322 Msa0250020:CDS 35.0%
AAGCTGAAGAATATTCTGGA+AGG + chr2_2:37820307-37820326 Msa0250020:CDS 35.0%
! AGCTGAAGAATATTCTGGAA+GGG + chr2_2:37820308-37820327 Msa0250020:CDS 35.0%
TGTAGTCATTTGATCCGTAA+TGG + chr2_2:37820648-37820667 Msa0250020:intron 35.0%
TTGATCAAAGGACACCATTA+CGG - chr2_2:37820665-37820684 None:intergenic 35.0%
! GCTTGATTGTTGTTGTTGTT+TGG + chr2_2:37820713-37820732 Msa0250020:intron 35.0%
ATATCATGTCATAGGTCACA+AGG - chr2_2:37820918-37820937 None:intergenic 35.0%
CGTCATTGATATCATGTCAT+AGG - chr2_2:37820926-37820945 None:intergenic 35.0%
GAGGACTACTTATAAGAACT+AGG - chr2_2:37821019-37821038 None:intergenic 35.0%
CTATAATTATCTAGTCCACG+TGG - chr2_2:37821072-37821091 None:intergenic 35.0%
! ATGTTATGTGGTTAGTTGTG+TGG - chr2_2:37821137-37821156 None:intergenic 35.0%
ACACAACTAACCACATAACA+TGG + chr2_2:37821136-37821155 Msa0250020:intron 35.0%
AAATGTCTGACCATGTTATG+TGG - chr2_2:37821149-37821168 None:intergenic 35.0%
TGGTTGTTTGTTCTTGTCTA+TGG - chr2_2:37821225-37821244 None:intergenic 35.0%
ACCATACACCATGTAACATT+TGG + chr2_2:37821241-37821260 Msa0250020:intron 35.0%
CCATACACCATGTAACATTT+GGG + chr2_2:37821242-37821261 Msa0250020:intron 35.0%
CATACACCATGTAACATTTG+GGG + chr2_2:37821243-37821262 Msa0250020:intron 35.0%
! CTTTTTCCCCAAATGTTACA+TGG - chr2_2:37821252-37821271 None:intergenic 35.0%
!! GAAAGTAGTTGGTAGCAAAA+AGG - chr2_2:37821315-37821334 None:intergenic 35.0%
AACACCCACTAAATACCTTT+GGG + chr2_2:37821389-37821408 Msa0250020:intron 35.0%
!! CAATCCCAAAGGTATTTAGT+GGG - chr2_2:37821396-37821415 None:intergenic 35.0%
TAGCTGCCATTAACAATATC+TGG + chr2_2:37821582-37821601 Msa0250020:intron 35.0%
ACCTCACCAGATATTGTTAA+TGG - chr2_2:37821591-37821610 None:intergenic 35.0%
AAATTATTGGGATCGTGAGT+TGG + chr2_2:37821644-37821663 Msa0250020:intron 35.0%
! CACGGGATTATTTCTTAATC+TGG + chr2_2:37821671-37821690 Msa0250020:intron 35.0%
AACAGAGAAACTAAGGGAAA+GGG - chr2_2:37821890-37821909 None:intergenic 35.0%
AAACAGAGAAACTAAGGGAA+AGG - chr2_2:37821891-37821910 None:intergenic 35.0%
GCAAGAAACAGAGAAACTAA+GGG - chr2_2:37821896-37821915 None:intergenic 35.0%
TGCAAGAAACAGAGAAACTA+AGG - chr2_2:37821897-37821916 None:intergenic 35.0%
GGATGAAGTAACTAAAACAG+AGG - chr2_2:37821927-37821946 None:intergenic 35.0%
TCATGAAGAACATGAAACAG+AGG - chr2_2:37822018-37822037 None:intergenic 35.0%
ATAGTAACTACGAATCTCTG+TGG + chr2_2:37822316-37822335 Msa0250020:intron 35.0%
TAGTAACTACGAATCTCTGT+GGG + chr2_2:37822317-37822336 Msa0250020:intron 35.0%
! GATTTAAGACAGAATTGGGA+AGG - chr2_2:37822364-37822383 None:intergenic 35.0%
!! TGAGACTGATTTGAATTTGC+TGG + chr2_2:37822483-37822502 Msa0250020:intron 35.0%
!! CTGATTTGAATTTGCTGGAA+AGG + chr2_2:37822488-37822507 Msa0250020:intron 35.0%
!! TTTGAATTTGCTGGAAAGGA+TGG + chr2_2:37822492-37822511 Msa0250020:intron 35.0%
!! GTCAAGCAGATTTTGCTTTT+AGG - chr2_2:37822643-37822662 None:intergenic 35.0%
TCATGTGGCTCATTTAATTG+AGG + chr2_2:37822754-37822773 Msa0250020:intron 35.0%
! CATTTAATTGAGGTGTCATG+TGG + chr2_2:37822764-37822783 Msa0250020:intron 35.0%
!!! AAATTCACTTTTTGGGCTTC+AGG + chr2_2:37822895-37822914 Msa0250020:intron 35.0%
! GCCATCTAACCATGATTTTA+TGG - chr2_2:37822988-37823007 None:intergenic 35.0%
TGGATCGATACTTTATTGCT+CGG + chr2_2:37823029-37823048 Msa0250020:CDS 35.0%
CATTTACTTCCTTGTAAACC+TGG - chr2_2:37823208-37823227 None:intergenic 35.0%
CAGGTTTACAAGGAAGTAAA+TGG + chr2_2:37823206-37823225 Msa0250020:intron 35.0%
AAGATTGATCAAGAACGTGA+AGG + chr2_2:37823335-37823354 Msa0250020:intron 35.0%
TATTTGTGGAGATTGGAATG+GGG + chr2_2:37823399-37823418 Msa0250020:CDS 35.0%
AATCAGGACAAGAATCTTCT+AGG - chr2_2:37823511-37823530 None:intergenic 35.0%
TTGTCCTGATTATATGCTCA+AGG + chr2_2:37823520-37823539 Msa0250020:CDS 35.0%
!!! ACAGTTTTAGACCAAATAGC+TGG - chr2_2:37823715-37823734 None:intergenic 35.0%
TGCATTACTTAGAGATGACA+AGG + chr2_2:37823932-37823951 Msa0250020:CDS 35.0%
ACAGCTTCCTTTAAATGCTT+AGG + chr2_2:37824017-37824036 Msa0250020:intron 35.0%
!! TTCTAAAATACCCAAAGGCT+TGG + chr2_2:37824071-37824090 Msa0250020:CDS 35.0%
CACAACCTGCTTAAATATAC+TGG - chr2_2:37824106-37824125 None:intergenic 35.0%
ATTTCTCCTTTCATTCCTGA+TGG + chr2_2:37824186-37824205 Msa0250020:intron 35.0%
!! TTGTCCTTATTTCTGGTTGA+GGG + chr2_2:37824325-37824344 Msa0250020:intron 35.0%
TAACACAAATTTGAACAGGC+GGG - chr2_2:37824410-37824429 None:intergenic 35.0%
GTAACACAAATTTGAACAGG+CGG - chr2_2:37824411-37824430 None:intergenic 35.0%
GTAAATAAGTCAAACTCGTG+TGG - chr2_2:37824671-37824690 None:intergenic 35.0%
ATTGTATAAGACGAGATCTC+AGG - chr2_2:37824990-37825009 None:intergenic 35.0%
TATACAATCCCAGAAGTTAC+TGG + chr2_2:37825002-37825021 Msa0250020:intron 35.0%
TATAAACATAAACTGTGGGG+GGG - chr2_2:37825077-37825096 None:intergenic 35.0%
ACAAAATCAAACGGAAGAGT+GGG - chr2_2:37825172-37825191 None:intergenic 35.0%
CCAATCTCAGTTTCCATAAA+TGG - chr2_2:37825348-37825367 None:intergenic 35.0%
CCATTTATGGAAACTGAGAT+TGG + chr2_2:37825345-37825364 Msa0250020:intron 35.0%
TGTGGAATAGAGTATGATTC+TGG - chr2_2:37825446-37825465 None:intergenic 35.0%
GAATCATACTCTATTCCACA+AGG + chr2_2:37825446-37825465 Msa0250020:CDS 35.0%
!! AACTAACGGGTTTATAAGCA+AGG - chr2_2:37825977-37825996 None:intergenic 35.0%
GCGATGGTATATTGAGAAAA+TGG + chr2_2:37826183-37826202 Msa0250020:intron 35.0%
GTTCTGTTAATATAAGGTCC+AGG + chr2_2:37826373-37826392 Msa0250020:intron 35.0%
CAAAAGCTTCACTTCAATGA+TGG - chr2_2:37826530-37826549 None:intergenic 35.0%
! TCATTGAAGTGAAGCTTTTG+TGG + chr2_2:37826530-37826549 Msa0250020:intron 35.0%
AGTGAGTTCCATTAGGAAAA+CGG - chr2_2:37826582-37826601 None:intergenic 35.0%
AAATTGAAGCAACAATGTGG+TGG + chr2_2:37826717-37826736 Msa0250020:CDS 35.0%
TACTTCAAAGATGGAAGGAA+TGG + chr2_2:37826746-37826765 Msa0250020:CDS 35.0%
AATAATCCTAATGTAGACCC+CGG + chr2_2:37826925-37826944 Msa0250020:CDS 35.0%
AGTAACTGTCAAGTCAATTC+CGG - chr2_2:37826947-37826966 None:intergenic 35.0%
CTAAGCACAGAAAACTTACT+TGG + chr2_2:37827179-37827198 Msa0250020:CDS 35.0%
! ACAATCAGTTCCATGGTTTT+TGG - chr2_2:37827247-37827266 None:intergenic 35.0%
AAAAGCAAAACACAACATCC+GGG - chr2_2:37827389-37827408 None:intergenic 35.0%
AGAATAACTCAGTCTATCTG+AGG - chr2_2:37827443-37827462 None:intergenic 35.0%
TATGAGTCAGTCTAACTCAA+GGG - chr2_2:37827712-37827731 None:intergenic 35.0%
TTATGAGTCAGTCTAACTCA+AGG - chr2_2:37827713-37827732 None:intergenic 35.0%
!!! ACTTTTTTCTTCTCATCCAC+AGG - chr2_2:37827760-37827779 None:intergenic 35.0%
AGTTATTGAGGATGTTGACA+AGG + chr2_2:37827777-37827796 Msa0250020:CDS 35.0%
CTTCATAATACGCACAATTG+AGG - chr2_2:37827824-37827843 None:intergenic 35.0%
TTGTGCGTATTATGAAGAGT+CGG + chr2_2:37827827-37827846 Msa0250020:CDS 35.0%
TTCTTAATTGCCTTGACATC+AGG - chr2_2:37828005-37828024 None:intergenic 35.0%
ATGTCAAGGCAATTAAGAAG+CGG + chr2_2:37828006-37828025 Msa0250020:CDS 35.0%
CATTATCTTTGTCTCTTTCC+AGG - chr2_2:37828058-37828077 None:intergenic 35.0%
ATAGCAAAACAAGATGAGGA+TGG + chr2_2:37828144-37828163 Msa0250020:three_prime_UTR 35.0%
GTTACTCTCAATTTCCTTGA+AGG + chr2_2:37828189-37828208 Msa0250020:three_prime_UTR 35.0%
ATTTATAGCTCCTTCCTTCA+AGG - chr2_2:37828206-37828225 None:intergenic 35.0%
CTGTAAATGTTTGCTCATGT+TGG + chr2_2:37828267-37828286 Msa0250020:three_prime_UTR 35.0%
ATGTTTGCTCATGTTGGAAA+AGG + chr2_2:37828273-37828292 Msa0250020:three_prime_UTR 35.0%
!! CAAAAAGGAAAGTACCATCT+AGG - chr2_2:37828325-37828344 None:intergenic 35.0%
! CTAGATGGTACTTTCCTTTT+TGG + chr2_2:37828323-37828342 Msa0250020:three_prime_UTR 35.0%
CGCAATTCCTATTTCCAATA+TGG - chr2_2:37828416-37828435 None:intergenic 35.0%
AACCATAAAATGAGTGGGTA+TGG + chr2_2:37828480-37828499 Msa0250020:three_prime_UTR 35.0%
CTTCACCGAAACCTTTATCA+GGG + chr2_2:37819571-37819590 Msa0250020:five_prime_UTR 40.0%
GCACGATTCTTTACCGAAAA+AGG + chr2_2:37819615-37819634 Msa0250020:five_prime_UTR 40.0%
!! GATTTAGTTTGGGGGGATTA+GGG + chr2_2:37819850-37819869 Msa0250020:intron 40.0%
TTAGGAACAATTAGGGGTTG+GGG + chr2_2:37820014-37820033 Msa0250020:intron 40.0%
GGAAATTTGGTTGCAGAGTT+TGG + chr2_2:37820200-37820219 Msa0250020:intron 40.0%
!! AGAGTTTGGTGTTAAGGCTA+GGG + chr2_2:37820214-37820233 Msa0250020:intron 40.0%
AGGGATTATCGATGAGTGAA+CGG + chr2_2:37820233-37820252 Msa0250020:exon 40.0%
! AGGATGGGATTTTATGCTGA+AGG + chr2_2:37820276-37820295 Msa0250020:CDS 40.0%
! GGATGGGATTTTATGCTGAA+GGG + chr2_2:37820277-37820296 Msa0250020:CDS 40.0%
GTACTTATCATACAGCGGTT+GGG - chr2_2:37820516-37820535 None:intergenic 40.0%
TGTACTTATCATACAGCGGT+TGG - chr2_2:37820517-37820536 None:intergenic 40.0%
AACCGCTGTATGATAAGTAC+AGG + chr2_2:37820516-37820535 Msa0250020:CDS 40.0%
ACCGCTGTATGATAAGTACA+GGG + chr2_2:37820517-37820536 Msa0250020:CDS 40.0%
TCCCTGTACTTATCATACAG+CGG - chr2_2:37820521-37820540 None:intergenic 40.0%
!! CATTATAGGGCTATTGGCTT+AGG + chr2_2:37820846-37820865 Msa0250020:intron 40.0%
TAATTATCTAGTCCACGTGG+AGG - chr2_2:37821069-37821088 None:intergenic 40.0%
CCCAAATGTTACATGGTGTA+TGG - chr2_2:37821245-37821264 None:intergenic 40.0%
CTCAGATCTTGTCTATGGTT+TGG - chr2_2:37821287-37821306 None:intergenic 40.0%
GTACACTCAGATCTTGTCTA+TGG - chr2_2:37821292-37821311 None:intergenic 40.0%
GGACTGATTGAGAAAGTAGT+TGG - chr2_2:37821326-37821345 None:intergenic 40.0%
!! CAAAGGTATTTAGTGGGTGT+TGG - chr2_2:37821390-37821409 None:intergenic 40.0%
CAACACCCACTAAATACCTT+TGG + chr2_2:37821388-37821407 Msa0250020:intron 40.0%
!! CCAATCCCAAAGGTATTTAG+TGG - chr2_2:37821397-37821416 None:intergenic 40.0%
!! CCACTAAATACCTTTGGGAT+TGG + chr2_2:37821394-37821413 Msa0250020:intron 40.0%
!! GAGATCAGTTTTGTCAATCG+CGG + chr2_2:37821424-37821443 Msa0250020:intron 40.0%
TTGTCAAATAGCCGCTATAG+TGG - chr2_2:37821503-37821522 None:intergenic 40.0%
GACAAACCACTATTGTTCCA+CGG - chr2_2:37821547-37821566 None:intergenic 40.0%
GCCATTAACAATATCTGGTG+AGG + chr2_2:37821587-37821606 Msa0250020:intron 40.0%
AAAAAAAAATACCGGGCGTG+TGG + chr2_2:37821619-37821638 Msa0250020:intron 40.0%
! CAATAATTTTTCCACACGCC+CGG - chr2_2:37821633-37821652 None:intergenic 40.0%
GGGCGTGTGGAAAAATTATT+GGG + chr2_2:37821632-37821651 Msa0250020:intron 40.0%
ACAGAGAAACTAAGGGAAAG+GGG - chr2_2:37821889-37821908 None:intergenic 40.0%
GGAATCAAAATGATCAGCCA+AGG + chr2_2:37822280-37822299 Msa0250020:intron 40.0%
CTATAGAGTAAAGACAGCCT+TGG - chr2_2:37822300-37822319 None:intergenic 40.0%
!! GATTTATTTTTCTTGGGGGG+TGG + chr2_2:37822717-37822736 Msa0250020:intron 40.0%
TTATGTTGCGAGAACTTGTG+AGG + chr2_2:37822951-37822970 Msa0250020:CDS 40.0%
! GTGGGCTAACCATAAAATCA+TGG + chr2_2:37822976-37822995 Msa0250020:CDS 40.0%
ATCGATACTTTATTGCTCGG+AGG + chr2_2:37823032-37823051 Msa0250020:CDS 40.0%
TTCCTCCGCTTAATGAAGTT+GGG + chr2_2:37823059-37823078 Msa0250020:CDS 40.0%
ATTCTCGAAAGGCTTCAAAC+TGG + chr2_2:37823483-37823502 Msa0250020:CDS 40.0%
! CTCAAGGTATTATTCCTTCG+TGG + chr2_2:37823536-37823555 Msa0250020:intron 40.0%
TGGAAATGAAGAAACCACGA+AGG - chr2_2:37823553-37823572 None:intergenic 40.0%
ATTGTGGCATTCATTACAGG+CGG + chr2_2:37823596-37823615 Msa0250020:intron 40.0%
CTTGAAACGGGAGAAAGATA+GGG + chr2_2:37823626-37823645 Msa0250020:CDS 40.0%
!! CTTAGGTTGAAGACTTGTCA+AGG + chr2_2:37824034-37824053 Msa0250020:intron 40.0%
GACAAACCATCAGGAATGAA+AGG - chr2_2:37824195-37824214 None:intergenic 40.0%
CATCACATAGACAAACCATC+AGG - chr2_2:37824204-37824223 None:intergenic 40.0%
TTCGGTAACATGCTGCATAT+AGG - chr2_2:37824235-37824254 None:intergenic 40.0%
AGATGCAGCAAGTAACAAGA+AGG + chr2_2:37824284-37824303 Msa0250020:CDS 40.0%
!! GTTGTCCTTATTTCTGGTTG+AGG + chr2_2:37824324-37824343 Msa0250020:intron 40.0%
!! TGTCCTTATTTCTGGTTGAG+GGG + chr2_2:37824326-37824345 Msa0250020:intron 40.0%
TAACCCCTCAACCAGAAATA+AGG - chr2_2:37824332-37824351 None:intergenic 40.0%
TAACGTGCTACATGACATGA+TGG + chr2_2:37824730-37824749 Msa0250020:intron 40.0%
!! GACATGATGGACAAACAATC+TGG + chr2_2:37824743-37824762 Msa0250020:intron 40.0%
GTCTTTGTCCAGTAACTTCT+GGG - chr2_2:37825013-37825032 None:intergenic 40.0%
TGTCTTTGTCCAGTAACTTC+TGG - chr2_2:37825014-37825033 None:intergenic 40.0%
!! TTGACTTTTTGAGCCAACGA+TGG + chr2_2:37825038-37825057 Msa0250020:intron 40.0%
GATAACTACTAGTCCATCGT+TGG - chr2_2:37825054-37825073 None:intergenic 40.0%
ATAAACATAAACTGTGGGGG+GGG - chr2_2:37825076-37825095 None:intergenic 40.0%
CACAAAATCAAACGGAAGAG+TGG - chr2_2:37825173-37825192 None:intergenic 40.0%
! CCAACAATATCCCTTTTCTC+CGG - chr2_2:37825262-37825281 None:intergenic 40.0%
CGGAGAAAAGGGATATTGTT+GGG + chr2_2:37825260-37825279 Msa0250020:CDS 40.0%
TATTGTTGGGTTACAAGAGC+AGG + chr2_2:37825273-37825292 Msa0250020:CDS 40.0%
!! TGAGATTGGTCTCTTTCTTC+AGG + chr2_2:37825359-37825378 Msa0250020:intron 40.0%
TATCCTATAGGCTCTTAAGG+AGG + chr2_2:37825530-37825549 Msa0250020:intron 40.0%
ACAAAATGTGGCAAGCAGTT+CGG - chr2_2:37825601-37825620 None:intergenic 40.0%
TAGAATGTGTCAGACCCAAT+TGG + chr2_2:37825866-37825885 Msa0250020:intron 40.0%
GACTTTAGTGGTCTAAGCTT+GGG + chr2_2:37825907-37825926 Msa0250020:intron 40.0%
ACTTTAGTGGTCTAAGCTTG+GGG + chr2_2:37825908-37825927 Msa0250020:intron 40.0%
!! TAACGGGTTTATAAGCAAGG+TGG - chr2_2:37825974-37825993 None:intergenic 40.0%
TGAAAAAAAGATCTTGGGGG+AGG - chr2_2:37826037-37826056 None:intergenic 40.0%
! TTTTCTTCCACGCATGTTAC+TGG + chr2_2:37826089-37826108 Msa0250020:intron 40.0%
CCAAAAAGGACAAAGCCAAA+GGG - chr2_2:37826409-37826428 None:intergenic 40.0%
!!! CCTTTGGCTTTGTCCTTTTT+GGG + chr2_2:37826407-37826426 Msa0250020:intron 40.0%
!!! GCTTTGTCCTTTTTGGGTTT+CGG + chr2_2:37826413-37826432 Msa0250020:intron 40.0%
GGCACAGTCAATGATACATT+TGG + chr2_2:37826501-37826520 Msa0250020:intron 40.0%
! AGTTAACCCCGTTTTCCTAA+TGG + chr2_2:37826571-37826590 Msa0250020:intron 40.0%
TGAGTTCCATTAGGAAAACG+GGG - chr2_2:37826580-37826599 None:intergenic 40.0%
GTGAGTTCCATTAGGAAAAC+GGG - chr2_2:37826581-37826600 None:intergenic 40.0%
! AGGAATGGTCAGTCTTTTCA+AGG + chr2_2:37826761-37826780 Msa0250020:intron 40.0%
!! GTCTTTTCAAGGCTTTGTGA+TGG + chr2_2:37826772-37826791 Msa0250020:intron 40.0%
TCAGGTTACAGATTTGACAC+TGG + chr2_2:37826864-37826883 Msa0250020:intron 40.0%
TACAGATTTGACACTGGCAA+AGG + chr2_2:37826870-37826889 Msa0250020:CDS 40.0%
TAACTGTCAAGTCAATTCCG+GGG - chr2_2:37826945-37826964 None:intergenic 40.0%
GTAACTGTCAAGTCAATTCC+GGG - chr2_2:37826946-37826965 None:intergenic 40.0%
ACTTATATTGCAGGTACCCA+AGG - chr2_2:37827212-37827231 None:intergenic 40.0%
TTGGGTACCTGCAATATAAG+TGG + chr2_2:37827211-37827230 Msa0250020:CDS 40.0%
TGGGTACCTGCAATATAAGT+GGG + chr2_2:37827212-37827231 Msa0250020:CDS 40.0%
AGTAGTCACAATCAGTTCCA+TGG - chr2_2:37827254-37827273 None:intergenic 40.0%
ACTGATTGTGACTACTTACC+AGG + chr2_2:37827258-37827277 Msa0250020:CDS 40.0%
CTTGTACTTGGCACATGATA+AGG - chr2_2:37827521-37827540 None:intergenic 40.0%
GGTAATATTGCTTTCGTGCT+TGG - chr2_2:37827559-37827578 None:intergenic 40.0%
AGACAAAATGAGGAGGATCA+AGG + chr2_2:37827612-37827631 Msa0250020:CDS 40.0%
! TTTTTCTTCTCATCCACAGG+AGG - chr2_2:37827757-37827776 None:intergenic 40.0%
GCAGATAGCAAAACAAGATG+AGG + chr2_2:37828140-37828159 Msa0250020:three_prime_UTR 40.0%
CTCTCAATTTCCTTGAAGGA+AGG + chr2_2:37828193-37828212 Msa0250020:three_prime_UTR 40.0%
AAGTCATCAGATGTGAATGC+AGG - chr2_2:37828359-37828378 None:intergenic 40.0%
GGGGTGGGAGAAATAATTAA+TGG - chr2_2:37828395-37828414 None:intergenic 40.0%
! TTATTTCTCCCACCCCATAT+TGG + chr2_2:37828399-37828418 Msa0250020:three_prime_UTR 40.0%
TCCTATTTCCAATATGGGGT+GGG - chr2_2:37828410-37828429 None:intergenic 40.0%
TTCCTATTTCCAATATGGGG+TGG - chr2_2:37828411-37828430 None:intergenic 40.0%
! TGCCATACCCACTCATTTTA+TGG - chr2_2:37828485-37828504 None:intergenic 40.0%
GAATCGAAACCTCACTTCTA+TGG + chr2_2:37828508-37828527 Msa0250020:three_prime_UTR 40.0%
CCTGATAAAGGTTTCGGTGA+AGG - chr2_2:37819573-37819592 None:intergenic 45.0%
CCTTCACCGAAACCTTTATC+AGG + chr2_2:37819570-37819589 Msa0250020:five_prime_UTR 45.0%
TAAAGAATCGTGCGCGATGA+TGG - chr2_2:37819608-37819627 None:intergenic 45.0%
!! TAGGGTTTAGTTTGGGGACT+AGG + chr2_2:37819713-37819732 Msa0250020:intron 45.0%
!! AGGGTTTAGTTTGGGGACTA+GGG + chr2_2:37819714-37819733 Msa0250020:intron 45.0%
!! GGATTTAGTTTGGGGGGATT+AGG + chr2_2:37819849-37819868 Msa0250020:intron 45.0%
TAGGAACAATTAGGGGTTGG+GGG + chr2_2:37820015-37820034 Msa0250020:intron 45.0%
!! GGTTGCAGAGTTTGGTGTTA+AGG + chr2_2:37820208-37820227 Msa0250020:intron 45.0%
!! CAGAGTTTGGTGTTAAGGCT+AGG + chr2_2:37820213-37820232 Msa0250020:intron 45.0%
!!! TGGGTTTTGTTTGAGCTCTG+AGG + chr2_2:37820414-37820433 Msa0250020:intron 45.0%
GGTTGGGAATAGTCATTTGG+AGG - chr2_2:37820500-37820519 None:intergenic 45.0%
AGCGGTTGGGAATAGTCATT+TGG - chr2_2:37820503-37820522 None:intergenic 45.0%
GCTGTATGATAAGTACAGGG+AGG + chr2_2:37820520-37820539 Msa0250020:CDS 45.0%
!! TAAGTACAGGGAGGCATTTG+AGG + chr2_2:37820529-37820548 Msa0250020:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr2_2:37820697-37820716 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr2_2:37820698-37820717 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG - chr2_2:37820699-37820718 None:intergenic 45.0%
CTATGGAAGACATGAGACAC+TGG - chr2_2:37821208-37821227 None:intergenic 45.0%
!! AATACCTTTGGGATTGGACG+TGG + chr2_2:37821400-37821419 Msa0250020:intron 45.0%
TCGCGGATAGCTGAAAATAG+TGG + chr2_2:37821441-37821460 Msa0250020:intron 45.0%
CGCGGATAGCTGAAAATAGT+GGG + chr2_2:37821442-37821461 Msa0250020:intron 45.0%
GTGCTATAGCACCACTATAG+CGG + chr2_2:37821489-37821508 Msa0250020:intron 45.0%
TTGTACTAAATAGCGTGCCG+TGG + chr2_2:37821527-37821546 Msa0250020:intron 45.0%
GCAGCTATAGTAGCCGAATT+TGG - chr2_2:37821569-37821588 None:intergenic 45.0%
CGGGCGTGTGGAAAAATTAT+TGG + chr2_2:37821631-37821650 Msa0250020:intron 45.0%
AAATTGAAGCAGCTTGGACC+AGG + chr2_2:37821733-37821752 Msa0250020:intron 45.0%
AGCTGAAAGATCGTAACTCG+AGG - chr2_2:37822209-37822228 None:intergenic 45.0%
TCGAGTTACGATCTTTCAGC+TGG + chr2_2:37822208-37822227 Msa0250020:intron 45.0%
! AAGGAGAGTCGGAGTCTTTT+GGG - chr2_2:37822345-37822364 None:intergenic 45.0%
ACAGAATTGGGAAGGAGAGT+CGG - chr2_2:37822356-37822375 None:intergenic 45.0%
!! GACTGGTCTGTGTCTCTTAA+AGG + chr2_2:37822598-37822617 Msa0250020:intron 45.0%
TCGTGCTTCTCTCTCAAAGA+AGG - chr2_2:37822926-37822945 None:intergenic 45.0%
CTTCCTCCGCTTAATGAAGT+TGG + chr2_2:37823058-37823077 Msa0250020:CDS 45.0%
GTCAGCCCAACTTCATTAAG+CGG - chr2_2:37823067-37823086 None:intergenic 45.0%
!! GCTGACTTGCTTTCGTGATT+TGG + chr2_2:37823081-37823100 Msa0250020:CDS 45.0%
!! TGCAGAAGTGTCTTTGAGCA+TGG - chr2_2:37823459-37823478 None:intergenic 45.0%
GCTTGAAACGGGAGAAAGAT+AGG + chr2_2:37823625-37823644 Msa0250020:CDS 45.0%
TAGCGAGCCCAAGTTATTAG+AGG + chr2_2:37823671-37823690 Msa0250020:CDS 45.0%
GAAACAGGATCCAAGCCTTT+GGG - chr2_2:37824084-37824103 None:intergenic 45.0%
ATGCAGCATGTTACCGAAGA+AGG + chr2_2:37824237-37824256 Msa0250020:intron 45.0%
! TACCGAAGAAGGTACAACGT+TGG + chr2_2:37824248-37824267 Msa0250020:CDS 45.0%
CACCAACGTTGTACCTTCTT+CGG - chr2_2:37824253-37824272 None:intergenic 45.0%
! AGGTACAACGTTGGTGAAGT+TGG + chr2_2:37824257-37824276 Msa0250020:CDS 45.0%
! GGCTTCAATGCCGATTATTG+CGG - chr2_2:37824389-37824408 None:intergenic 45.0%
TCAAACTCGTGTGGCTCAAA+TGG - chr2_2:37824662-37824681 None:intergenic 45.0%
GACTCGTTGTGCTCATCAAA+AGG + chr2_2:37824961-37824980 Msa0250020:intron 45.0%
AGGTCGTACACGTTCCTTAT+CGG + chr2_2:37825099-37825118 Msa0250020:intron 45.0%
CCGGAGAAAAGGGATATTGT+TGG + chr2_2:37825259-37825278 Msa0250020:CDS 45.0%
AACAGTCGTTCACATATGCC+AGG - chr2_2:37825422-37825441 None:intergenic 45.0%
AAGCCTCCTTAAGAGCCTAT+AGG - chr2_2:37825536-37825555 None:intergenic 45.0%
!!! TTTTGCAACAAGGGTGTTGC+TGG + chr2_2:37825564-37825583 Msa0250020:CDS 45.0%
AATGTGTCAGACCCAATTGG+AGG + chr2_2:37825869-37825888 Msa0250020:intron 45.0%
!! GCGTGCATAATGGACTTTAG+TGG + chr2_2:37825895-37825914 Msa0250020:intron 45.0%
GGACTTTAGTGGTCTAAGCT+TGG + chr2_2:37825906-37825925 Msa0250020:intron 45.0%
CTTTAGTGGTCTAAGCTTGG+GGG + chr2_2:37825909-37825928 Msa0250020:intron 45.0%
TTTAGTGGTCTAAGCTTGGG+GGG + chr2_2:37825910-37825929 Msa0250020:intron 45.0%
AAGGTGGAGTGAAGTCCAAA+TGG - chr2_2:37825958-37825977 None:intergenic 45.0%
! CCAAAGGGATTTGGTATTCC+TGG - chr2_2:37826394-37826413 None:intergenic 45.0%
CCAGGAATACCAAATCCCTT+TGG + chr2_2:37826391-37826410 Msa0250020:intron 45.0%
AGGACAAAGCCAAAGGGATT+TGG - chr2_2:37826403-37826422 None:intergenic 45.0%
!!! CCCTTTGGCTTTGTCCTTTT+TGG + chr2_2:37826406-37826425 Msa0250020:intron 45.0%
CCCAAAAAGGACAAAGCCAA+AGG - chr2_2:37826410-37826429 None:intergenic 45.0%
! CTTGCAGGAAAAAGCTTGCT+CGG + chr2_2:37826640-37826659 Msa0250020:intron 45.0%
ACTCCTCTCATGGTCATCAT+TGG - chr2_2:37826688-37826707 None:intergenic 45.0%
GGAGAACCAAACAAGCTTTG+AGG + chr2_2:37826891-37826910 Msa0250020:CDS 45.0%
TCAATTCCGGGGTCTACATT+AGG - chr2_2:37826934-37826953 None:intergenic 45.0%
ACAGTTACTGTTCTGACCAC+TGG + chr2_2:37826958-37826977 Msa0250020:CDS 45.0%
CCATTTCTGCAGGAAGATTG+AGG - chr2_2:37827011-37827030 None:intergenic 45.0%
CCTCAATCTTCCTGCAGAAA+TGG + chr2_2:37827008-37827027 Msa0250020:CDS 45.0%
GCGTATTATGAAGAGTCGGA+AGG + chr2_2:37827831-37827850 Msa0250020:CDS 45.0%
TCCCACCCCATATTGGAAAT+AGG + chr2_2:37828406-37828425 Msa0250020:three_prime_UTR 45.0%
!! TAATAAGAAAAAAATAAAAA+AGG - chr2_2:37819489-37819508 None:intergenic 5.0%
!! AAAAAAAAAAAAAAAAACAT+TGG - chr2_2:37823177-37823196 None:intergenic 5.0%
AACAATTAGGGGTTGGGGGA+AGG + chr2_2:37820019-37820038 Msa0250020:intron 50.0%
TCAGAGCTGAACTGAGGTTC+AGG - chr2_2:37820337-37820356 None:intergenic 50.0%
TGAACCTCAGTTCAGCTCTG+AGG + chr2_2:37820336-37820355 Msa0250020:CDS 50.0%
TAGTCCTCAGAGCTGAACTG+AGG - chr2_2:37820343-37820362 None:intergenic 50.0%
GGGTCGGCTACATTGATCAA+AGG - chr2_2:37820677-37820696 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr2_2:37820693-37820712 None:intergenic 50.0%
TGGAACATTCAACCTCCACG+TGG + chr2_2:37821054-37821073 Msa0250020:intron 50.0%
! TGTGGTTAGTTGTGTGGCTG+CGG - chr2_2:37821131-37821150 None:intergenic 50.0%
GAAGACATGAGACACTGGTC+TGG - chr2_2:37821203-37821222 None:intergenic 50.0%
CACAACTCGCAACAGACAAG+TGG - chr2_2:37821347-37821366 None:intergenic 50.0%
!! GGATCGTGAGTTGGTTTGCA+CGG + chr2_2:37821653-37821672 Msa0250020:intron 50.0%
!! GATCGTGAGTTGGTTTGCAC+GGG + chr2_2:37821654-37821673 Msa0250020:intron 50.0%
GTAACTCGAGGATCATAGCG+TGG - chr2_2:37822197-37822216 None:intergenic 50.0%
! GAAGGAGAGTCGGAGTCTTT+TGG - chr2_2:37822346-37822365 None:intergenic 50.0%
! ATTTTTCTTGGGGGGTGGAG+TGG + chr2_2:37822722-37822741 Msa0250020:intron 50.0%
!! GAGTGGTAAGAGGTGTCATG+TGG + chr2_2:37822739-37822758 Msa0250020:intron 50.0%
TGTTGCGAGAACTTGTGAGG+AGG + chr2_2:37822954-37822973 Msa0250020:CDS 50.0%
AGCCCAACTTCATTAAGCGG+AGG - chr2_2:37823064-37823083 None:intergenic 50.0%
GGAGATTGGAATGGGGCATA+TGG + chr2_2:37823406-37823425 Msa0250020:CDS 50.0%
GGAAACAGGATCCAAGCCTT+TGG - chr2_2:37824085-37824104 None:intergenic 50.0%
AATGTCTGCAGCCGGAGAAA+AGG + chr2_2:37825248-37825267 Msa0250020:intron 50.0%
ATGTCTGCAGCCGGAGAAAA+GGG + chr2_2:37825249-37825268 Msa0250020:intron 50.0%
TGAGCTGCATGACAAGTACC+TGG + chr2_2:37825401-37825420 Msa0250020:CDS 50.0%
ATGCACGCACACCTCCAATT+GGG - chr2_2:37825883-37825902 None:intergenic 50.0%
TATGCACGCACACCTCCAAT+TGG - chr2_2:37825884-37825903 None:intergenic 50.0%
! TTGGAGGTGTGCGTGCATAA+TGG + chr2_2:37825885-37825904 Msa0250020:intron 50.0%
CGACTTTCCAGTAACATGCG+TGG - chr2_2:37826099-37826118 None:intergenic 50.0%
!! GCTTTTTCCTGCAAGCAACC+AGG - chr2_2:37826635-37826654 None:intergenic 50.0%
GTGCCAATGATGACCATGAG+AGG + chr2_2:37826682-37826701 Msa0250020:CDS 50.0%
!! CTGTTCTGACCACTGGTTTC+TGG + chr2_2:37826965-37826984 Msa0250020:CDS 50.0%
GTAACTAGGCCAGAAACCAG+TGG - chr2_2:37826977-37826996 None:intergenic 50.0%
TTCTCATCCACAGGAGGAAG+AGG - chr2_2:37827751-37827770 None:intergenic 50.0%
CGCACTCCATCACTAACTGT+TGG - chr2_2:37827867-37827886 None:intergenic 50.0%
ATGGAGTGCGTTGAGCAGTT+AGG + chr2_2:37827877-37827896 Msa0250020:CDS 50.0%
GCAGTTAGGCCGCATGTTTA+AGG + chr2_2:37827891-37827910 Msa0250020:CDS 50.0%
CTTGATCTCTCGAGACTACC+TGG + chr2_2:37828037-37828056 Msa0250020:CDS 50.0%
!! CTCCATATCCAAGTATCGGC+TGG + chr2_2:37828241-37828260 Msa0250020:three_prime_UTR 50.0%
AGCCAGCCGATACTTGGATA+TGG - chr2_2:37828246-37828265 None:intergenic 50.0%
TACAGTAGCCAGCCGATACT+TGG - chr2_2:37828252-37828271 None:intergenic 50.0%
AATTAGGGGTTGGGGGAAGG+AGG + chr2_2:37820022-37820041 Msa0250020:intron 55.0%
ATTAGGGGTTGGGGGAAGGA+GGG + chr2_2:37820023-37820042 Msa0250020:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr2_2:37820684-37820703 Msa0250020:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr2_2:37820685-37820704 Msa0250020:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr2_2:37820691-37820710 Msa0250020:intron 55.0%
CTCACCACGTCCAATCCCAA+AGG - chr2_2:37821407-37821426 None:intergenic 55.0%
AGCGTGCCGTGGAACAATAG+TGG + chr2_2:37821538-37821557 Msa0250020:intron 55.0%
TGCGAGAACTTGTGAGGAGG+TGG + chr2_2:37822957-37822976 Msa0250020:CDS 55.0%
GCGAGAACTTGTGAGGAGGT+GGG + chr2_2:37822958-37822977 Msa0250020:CDS 55.0%
GTGGCATTCATTACAGGCGG+AGG + chr2_2:37823599-37823618 Msa0250020:intron 55.0%
!! AGGCGGAGGAGTGCTTGAAA+CGG + chr2_2:37823613-37823632 Msa0250020:intron 55.0%
GTCTAAGCTTGGGGGGTTCA+TGG + chr2_2:37825917-37825936 Msa0250020:intron 55.0%
CATCTTGCCTGGTTGCTTGC+AGG + chr2_2:37826625-37826644 Msa0250020:intron 55.0%
! GCAGGAAAAAGCTTGCTCGG+AGG + chr2_2:37826643-37826662 Msa0250020:intron 55.0%
GCAGATTCCTCTTCCTCCTG+TGG + chr2_2:37827741-37827760 Msa0250020:intron 55.0%
GTTTGCGCAGCCTGATGTCA+AGG + chr2_2:37827992-37828011 Msa0250020:intron 55.0%
CGCAACGCACCATAGAAGTG+AGG - chr2_2:37828520-37828539 None:intergenic 55.0%
TTGGGGGGTGGAGTGGTAAG+AGG + chr2_2:37822729-37822748 Msa0250020:intron 60.0%
!! GGCGGAGGAGTGCTTGAAAC+GGG + chr2_2:37823614-37823633 Msa0250020:intron 60.0%
TGGGCTCGCTACTAGAGTGC+AGG - chr2_2:37823662-37823681 None:intergenic 60.0%
TCGCAGTTGCTGCCGGAGGA+GGG - chr2_2:37821862-37821881 None:intergenic 65.0%
!! TCGCAGTCGCGCTGGCTGAG+AGG - chr2_2:37821825-37821844 None:intergenic 70.0%
CCACCTCTCACGCCCTCCTC+CGG + chr2_2:37821847-37821866 Msa0250020:intron 70.0%
GTCGCAGTTGCTGCCGGAGG+AGG - chr2_2:37821863-37821882 None:intergenic 70.0%
AGCGTCGCAGTTGCTGCCGG+AGG - chr2_2:37821866-37821885 None:intergenic 70.0%
!! GGGAGCGTCGCAGTTGCTGC+CGG - chr2_2:37821869-37821888 None:intergenic 70.0%
AGGTGGCGTCGCAGTCGCGC+TGG - chr2_2:37821833-37821852 None:intergenic 75.0%
! CCGGAGGAGGGCGTGAGAGG+TGG - chr2_2:37821850-37821869 None:intergenic 75.0%
! CTGCCGGAGGAGGGCGTGAG+AGG - chr2_2:37821853-37821872 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 37819445 37828587 37819445 ID=Msa0250020;Name=Msa0250020
chr2_2 mRNA 37819445 37828587 37819445 ID=Msa0250020-mRNA-1;Parent=Msa0250020;Name=Msa0250020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=221|1|1|1|0.94|0.9|20|484|742
chr2_2 exon 37819445 37819637 37819445 ID=Msa0250020-mRNA-1:exon:11918;Parent=Msa0250020-mRNA-1
chr2_2 exon 37820216 37820377 37820216 ID=Msa0250020-mRNA-1:exon:11919;Parent=Msa0250020-mRNA-1
chr2_2 exon 37820469 37820568 37820469 ID=Msa0250020-mRNA-1:exon:11920;Parent=Msa0250020-mRNA-1
chr2_2 exon 37822917 37823102 37822917 ID=Msa0250020-mRNA-1:exon:11921;Parent=Msa0250020-mRNA-1
chr2_2 exon 37823209 37823256 37823209 ID=Msa0250020-mRNA-1:exon:11922;Parent=Msa0250020-mRNA-1
chr2_2 exon 37823338 37823541 37823338 ID=Msa0250020-mRNA-1:exon:11923;Parent=Msa0250020-mRNA-1
chr2_2 exon 37823615 37823692 37823615 ID=Msa0250020-mRNA-1:exon:11924;Parent=Msa0250020-mRNA-1
chr2_2 exon 37823864 37823953 37823864 ID=Msa0250020-mRNA-1:exon:11925;Parent=Msa0250020-mRNA-1
chr2_2 exon 37824039 37824119 37824039 ID=Msa0250020-mRNA-1:exon:11926;Parent=Msa0250020-mRNA-1
chr2_2 exon 37824243 37824305 37824243 ID=Msa0250020-mRNA-1:exon:11927;Parent=Msa0250020-mRNA-1
chr2_2 exon 37825259 37825294 37825259 ID=Msa0250020-mRNA-1:exon:11928;Parent=Msa0250020-mRNA-1
chr2_2 exon 37825381 37825467 37825381 ID=Msa0250020-mRNA-1:exon:11929;Parent=Msa0250020-mRNA-1
chr2_2 exon 37825540 37825689 37825540 ID=Msa0250020-mRNA-1:exon:11930;Parent=Msa0250020-mRNA-1
chr2_2 exon 37825778 37825833 37825778 ID=Msa0250020-mRNA-1:exon:11931;Parent=Msa0250020-mRNA-1
chr2_2 exon 37826647 37826767 37826647 ID=Msa0250020-mRNA-1:exon:11932;Parent=Msa0250020-mRNA-1
chr2_2 exon 37826868 37827029 37826868 ID=Msa0250020-mRNA-1:exon:11933;Parent=Msa0250020-mRNA-1
chr2_2 exon 37827136 37827279 37827136 ID=Msa0250020-mRNA-1:exon:11934;Parent=Msa0250020-mRNA-1
chr2_2 exon 37827415 37827633 37827415 ID=Msa0250020-mRNA-1:exon:11935;Parent=Msa0250020-mRNA-1
chr2_2 exon 37827745 37827912 37827745 ID=Msa0250020-mRNA-1:exon:11936;Parent=Msa0250020-mRNA-1
chr2_2 exon 37828002 37828587 37828002 ID=Msa0250020-mRNA-1:exon:11937;Parent=Msa0250020-mRNA-1
chr2_2 five_prime_UTR 37819445 37819637 37819445 ID=Msa0250020-mRNA-1:five_prime_utr;Parent=Msa0250020-mRNA-1
chr2_2 five_prime_UTR 37820216 37820243 37820216 ID=Msa0250020-mRNA-1:five_prime_utr;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37820244 37820377 37820244 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37820469 37820568 37820469 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37822917 37823102 37822917 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37823209 37823256 37823209 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37823338 37823541 37823338 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37823615 37823692 37823615 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37823864 37823953 37823864 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37824039 37824119 37824039 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37824243 37824305 37824243 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37825259 37825294 37825259 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37825381 37825467 37825381 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37825540 37825689 37825540 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37825778 37825833 37825778 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37826647 37826767 37826647 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37826868 37827029 37826868 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37827136 37827279 37827136 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37827415 37827633 37827415 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37827745 37827912 37827745 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 CDS 37828002 37828103 37828002 ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1
chr2_2 three_prime_UTR 37828104 37828587 37828104 ID=Msa0250020-mRNA-1:three_prime_utr;Parent=Msa0250020-mRNA-1
Gene Sequence

>Msa0250020

ATGAGTGAACGGAAGACTATTGATTTAGAACAAGGATGGGATTTTATGCTGAAGGGAATACAGAAGCTGAAGAATATTCTGGAAGGGTTACCTGAACCTCAGTTCAGCTCTGAGGACTACATGATGCTATACACAACTATATATAATATGTGTACTCAGAAGCCTCCAAATGACTATTCCCAACCGCTGTATGATAAGTACAGGGAGGCATTTGAGGAGTACATCTTATCAACTGTATTACCTTCTTTGAGAGAGAAGCACGATGAATTTATGTTGCGAGAACTTGTGAGGAGGTGGGCTAACCATAAAATCATGGTTAGATGGCTTTCTCGTTTCTTTCACTATTTGGATCGATACTTTATTGCTCGGAGGTCACTTCCTCCGCTTAATGAAGTTGGGCTGACTTGCTTTCGTGATTTGGTTTACAAGGAAGTAAATGGGAAAGTGAGAGATGCCGTGATTTCTCTTATTGATCAAGAACGTGAAGGAGAGCAGATCGATCGAGCTCTGATAAAAAATGTATTAGATATATTTGTGGAGATTGGAATGGGGCATATGGATCACTATGAAAATGATTTTGAAACTGCCATGCTCAAAGACACTTCTGCATATTATTCTCGAAAGGCTTCAAACTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGCGGAGGAGTGCTTGAAACGGGAGAAAGATAGGGTTGCTAATTACCTGCACTCTAGTAGCGAGCCCAAGTTATTAGAGAAAGTTCAACATGAGCTTTTATCTGTGTATGCAAACCAACTTCTTGAAAAAGAACATTCTGGATGTCATGCATTACTTAGAGATGACAAGGTTGAAGACTTGTCAAGGATGTTCAGACTCTTTTCTAAAATACCCAAAGGCTTGGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACCGAAGAAGGTACAACGTTGGTGAAGTTGGCTGAAGATGCAGCAAGTAACAAGAAGCCGGAGAAAAGGGATATTGTTGGGTTACAAGAGCAGGTTTTTGTTCGAAAAGTGATTGAGCTGCATGACAAGTACCTGGCATATGTGAACGACTGTTTCCAGAATCATACTCTATTCCACAAGGCTCTTAAGGAGGCTTTTGAGATATTTTGCAACAAGGGTGTTGCTGGAAGCTCAAGTGCCGAACTGCTTGCCACATTTTGTGATAATATTCTCAAGAAAGGCGGAAGTGAAAAATTGAGTGATGAAGCAATTGAAGAAACACTTGAGAAGGTTGTCAAGCTACTTGCTTATATAAGTGACAAAGATTTGTTTGCCGAATTTTATAGGAAAAAGCTTGCTCGGAGGCTTCTTTTTGATAAGAGTGCCAATGATGACCATGAGAGGAGTATTTTAACAAAATTGAAGCAACAATGTGGTGGTCAATTTACTTCAAAGATGGAAGGAATGGTTACAGATTTGACACTGGCAAAGGAGAACCAAACAAGCTTTGAGGAATATTTAAAAAATAATCCTAATGTAGACCCCGGAATTGACTTGACAGTTACTGTTCTGACCACTGGTTTCTGGCCTAGTTACAAATCTTTTGACCTCAATCTTCCTGCAGAAATGGTTAAGTGTGTAGAAGTTTTCAAGGAGTTTTATCAAACTAAAACTAAGCACAGAAAACTTACTTGGATTTATTCCTTGGGTACCTGCAATATAAGTGGGAAATTTGAACCAAAAACCATGGAACTGATTGTGACTACTTACCAGGCTTCAGCATTGCTTCTTTTCAATTCCTCAGATAGACTGAGTTATTCTGAGATAATGGCTCAGTTGAACTTAAACGATGATGATGTTATTAGACTTCTTCACTCCTTATCATGTGCCAAGTACAAGATTCTTAACAAGGAACCAAGCACGAAAGCAATATTACCTACCGATTATTTTGAATTTAATTCAAAATTTACAGACAAAATGAGGAGGATCAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAAAAAGTTATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGGAGTGCGTTGAGCAGTTAGGCCGCATGTTTAAGCCTGATGTCAAGGCAATTAAGAAGCGGATTGAAGACTTGATCTCTCGAGACTACCTGGAAAGAGACAAAGATAATGCAAATTTGTTCAAGTACTTGGCTTGA

Protein sequence

>Msa0250020

MSERKTIDLEQGWDFMLKGIQKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPNDYSQPLYDKYREAFEEYILSTVLPSLREKHDEFMLRELVRRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKEVNGKVRDAVISLIDQEREGEQIDRALIKNVLDIFVEIGMGHMDHYENDFETAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVANYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPKGLDPVSSIFKQHVTEEGTTLVKLAEDAASNKKPEKRDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLKNNPNVDPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMAQLNLNDDDVIRLLHSLSCAKYKILNKEPSTKAILPTDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLNYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFKYLA*