Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0250020 | XP_013463300.1 | 99.596 | 742 | 3 | 0 | 1 | 742 | 1 | 742 | 0.0 | 1527 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0250020 | sp|Q5ZC88|CUL1_ORYSJ | 84.865 | 740 | 112 | 0 | 3 | 742 | 5 | 744 | 0.0 | 1331 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0250020 | A0A072V6S2 | 99.596 | 742 | 3 | 0 | 1 | 742 | 1 | 742 | 0.0 | 1527 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0200580 | Msa0250020 | 0.845609 | 3.649052e-59 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0250020 | MtrunA17_Chr2g0296381 | 99.596 | 742 | 3 | 0 | 1 | 742 | 1 | 742 | 0.0 | 1527 |
Msa0250020 | MtrunA17_Chr4g0067011 | 93.396 | 742 | 49 | 0 | 1 | 742 | 3 | 744 | 0.0 | 1443 |
Msa0250020 | MtrunA17_Chr7g0268881 | 85.347 | 389 | 57 | 0 | 354 | 742 | 1 | 389 | 0.0 | 703 |
Msa0250020 | MtrunA17_Chr7g0268891 | 72.189 | 338 | 92 | 1 | 3 | 340 | 2 | 337 | 0.0 | 521 |
Msa0250020 | MtrunA17_Chr8g0361901 | 34.225 | 710 | 428 | 13 | 43 | 742 | 51 | 731 | 4.86e-131 | 405 |
Msa0250020 | MtrunA17_Chr6g0453061 | 33.513 | 743 | 449 | 14 | 10 | 742 | 23 | 730 | 1.14e-126 | 394 |
Msa0250020 | MtrunA17_Chr5g0416711 | 34.153 | 732 | 439 | 15 | 23 | 742 | 32 | 732 | 1.05e-121 | 381 |
Msa0250020 | MtrunA17_Chr6g0453081 | 32.571 | 743 | 456 | 15 | 10 | 742 | 23 | 730 | 1.05e-120 | 379 |
Msa0250020 | MtrunA17_Chr1g0166181 | 35.455 | 660 | 396 | 11 | 92 | 742 | 101 | 739 | 4.58e-120 | 377 |
Msa0250020 | MtrunA17_Chr2g0285881 | 33.194 | 720 | 433 | 14 | 34 | 742 | 110 | 792 | 1.62e-118 | 374 |
Msa0250020 | MtrunA17_Chr1g0166131 | 34.493 | 661 | 401 | 12 | 92 | 742 | 102 | 740 | 6.50e-115 | 363 |
Msa0250020 | MtrunA17_Chr7g0231701 | 32.727 | 660 | 401 | 11 | 92 | 742 | 83 | 708 | 1.47e-106 | 341 |
Msa0250020 | MtrunA17_Chr1g0166141 | 34.983 | 606 | 366 | 9 | 144 | 742 | 90 | 674 | 5.87e-104 | 333 |
Msa0250020 | MtrunA17_Chr7g0231741 | 40.576 | 382 | 211 | 7 | 369 | 742 | 2 | 375 | 1.20e-80 | 262 |
Msa0250020 | MtrunA17_Chr4g0067071 | 55.500 | 200 | 89 | 0 | 7 | 206 | 5 | 204 | 2.00e-71 | 232 |
Msa0250020 | MtrunA17_Chr4g0067051 | 54.412 | 204 | 89 | 2 | 5 | 206 | 3 | 204 | 7.08e-68 | 222 |
Msa0250020 | MtrunA17_Chr4g0067031 | 51.770 | 226 | 101 | 3 | 2 | 222 | 6 | 228 | 1.71e-64 | 219 |
Msa0250020 | MtrunA17_Chr5g0416691 | 36.562 | 413 | 238 | 10 | 341 | 742 | 2 | 401 | 2.85e-64 | 219 |
Msa0250020 | MtrunA17_Chr7g0231791 | 36.010 | 411 | 243 | 9 | 341 | 742 | 2 | 401 | 3.35e-63 | 216 |
Msa0250020 | MtrunA17_Chr4g0067381 | 52.683 | 205 | 94 | 1 | 2 | 206 | 4 | 205 | 4.87e-62 | 206 |
Msa0250020 | MtrunA17_Chr5g0416831 | 34.557 | 327 | 167 | 7 | 423 | 742 | 3 | 289 | 4.78e-49 | 174 |
Msa0250020 | MtrunA17_Chr5g0416731 | 26.498 | 434 | 273 | 11 | 44 | 443 | 25 | 446 | 2.18e-39 | 151 |
Msa0250020 | MtrunA17_Chr7g0231721 | 26.765 | 340 | 227 | 8 | 48 | 385 | 29 | 348 | 2.72e-35 | 137 |
Msa0250020 | MtrunA17_Chr7g0231581 | 26.710 | 307 | 206 | 6 | 76 | 380 | 22 | 311 | 4.09e-32 | 127 |
Msa0250020 | MtrunA17_Chr5g0416901 | 26.710 | 307 | 206 | 5 | 76 | 380 | 46 | 335 | 6.80e-32 | 127 |
Msa0250020 | MtrunA17_Chr7g0231751 | 27.891 | 294 | 186 | 7 | 32 | 305 | 21 | 308 | 1.60e-28 | 116 |
Msa0250020 | MtrunA17_Chr7g0231571 | 29.464 | 224 | 152 | 4 | 76 | 297 | 22 | 241 | 5.79e-27 | 110 |
Msa0250020 | MtrunA17_Chr4g0074661 | 58.427 | 89 | 36 | 1 | 1 | 89 | 1 | 88 | 7.82e-27 | 105 |
Msa0250020 | MtrunA17_Chr5g0416911 | 29.018 | 224 | 153 | 4 | 76 | 297 | 30 | 249 | 8.66e-27 | 110 |
Msa0250020 | MtrunA17_Chr5g0416681 | 26.027 | 219 | 156 | 2 | 89 | 304 | 36 | 251 | 2.61e-19 | 88.2 |
Msa0250020 | MtrunA17_Chr7g0231801 | 26.027 | 219 | 156 | 2 | 89 | 304 | 36 | 251 | 2.98e-19 | 88.2 |
Msa0250020 | MtrunA17_Chr4g0068101 | 51.087 | 92 | 45 | 0 | 75 | 166 | 14 | 105 | 2.92e-17 | 78.2 |
Msa0250020 | MtrunA17_Chr1g0166151 | 24.719 | 178 | 125 | 5 | 92 | 267 | 14 | 184 | 1.78e-12 | 66.6 |
Msa0250020 | MtrunA17_Chr2g0285291 | 76.923 | 39 | 9 | 0 | 618 | 656 | 30 | 68 | 3.27e-12 | 63.2 |
Msa0250020 | MtrunA17_Chr4g0042591 | 28.962 | 183 | 118 | 4 | 423 | 596 | 553 | 732 | 4.92e-12 | 69.7 |
Msa0250020 | MtrunA17_Chr7g0222201 | 26.768 | 198 | 135 | 3 | 423 | 611 | 563 | 759 | 8.20e-12 | 68.9 |
Msa0250020 | MtrunA17_Chr4g0042651 | 27.225 | 191 | 129 | 3 | 423 | 604 | 553 | 742 | 1.41e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0250020 | AT4G02570.4 | 81.081 | 740 | 137 | 1 | 3 | 742 | 2 | 738 | 0.0 | 1278 |
Msa0250020 | AT4G02570.2 | 81.081 | 740 | 137 | 1 | 3 | 742 | 2 | 738 | 0.0 | 1278 |
Msa0250020 | AT4G02570.1 | 81.081 | 740 | 137 | 1 | 3 | 742 | 2 | 738 | 0.0 | 1278 |
Msa0250020 | AT4G02570.3 | 81.081 | 740 | 137 | 1 | 3 | 742 | 2 | 738 | 0.0 | 1278 |
Msa0250020 | AT1G02980.1 | 65.188 | 744 | 255 | 4 | 1 | 742 | 1 | 742 | 0.0 | 1030 |
Msa0250020 | AT1G02980.2 | 65.188 | 744 | 255 | 4 | 1 | 742 | 1 | 742 | 0.0 | 1030 |
Msa0250020 | AT1G43140.1 | 65.405 | 740 | 225 | 3 | 4 | 742 | 12 | 721 | 0.0 | 1005 |
Msa0250020 | AT1G59790.2 | 57.552 | 384 | 142 | 3 | 1 | 382 | 6 | 370 | 6.37e-153 | 449 |
Msa0250020 | AT1G59790.1 | 57.527 | 372 | 137 | 3 | 1 | 370 | 6 | 358 | 1.72e-147 | 436 |
Msa0250020 | AT1G26830.1 | 34.312 | 749 | 434 | 14 | 10 | 742 | 26 | 732 | 9.45e-135 | 416 |
Msa0250020 | AT1G69670.1 | 34.979 | 709 | 424 | 13 | 43 | 742 | 52 | 732 | 3.02e-134 | 414 |
Msa0250020 | AT1G69670.2 | 34.979 | 709 | 424 | 13 | 43 | 742 | 52 | 732 | 3.02e-134 | 414 |
Msa0250020 | AT5G46210.1 | 34.123 | 718 | 423 | 16 | 37 | 742 | 113 | 792 | 6.02e-111 | 355 |
Msa0250020 | AT1G59800.1 | 54.098 | 244 | 108 | 1 | 7 | 250 | 7 | 246 | 2.09e-88 | 278 |
Msa0250020 | AT2G04660.1 | 27.041 | 196 | 133 | 2 | 423 | 611 | 543 | 735 | 9.25e-11 | 65.9 |
Find 184 sgRNAs with CRISPR-Local
Find 589 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGTTCTGACCACTGGTTTC+TGG | 0.082911 | 2_2:+37826965 | Msa0250020:CDS |
TTCTCGTTTCTTTCACTATT+TGG | 0.108715 | 2_2:+37823009 | Msa0250020:CDS |
GCACGATTCTTTACCGAAAA+AGG | 0.119181 | 2_2:+37819615 | Msa0250020:five_prime_UTR |
CGCAATTCCTATTTCCAATA+TGG | 0.172526 | 2_2:-37828413 | None:intergenic |
CCTTCACCGAAACCTTTATC+AGG | 0.234716 | 2_2:+37819570 | Msa0250020:five_prime_UTR |
CAGGTTTACAAGGAAGTAAA+TGG | 0.245353 | 2_2:+37823206 | Msa0250020:intron |
CATTATCTTTGTCTCTTTCC+AGG | 0.286661 | 2_2:-37828055 | None:intergenic |
GAATCGAAACCTCACTTCTA+TGG | 0.303904 | 2_2:+37828508 | Msa0250020:three_prime_UTR |
TCCCACCCCATATTGGAAAT+AGG | 0.304343 | 2_2:+37828406 | Msa0250020:three_prime_UTR |
CACAACCTGCTTAAATATAC+TGG | 0.307077 | 2_2:-37824103 | None:intergenic |
GCTGACTTGCTTTCGTGATT+TGG | 0.326859 | 2_2:+37823081 | Msa0250020:CDS |
GCAGTTAGGCCGCATGTTTA+AGG | 0.326909 | 2_2:+37827891 | Msa0250020:CDS |
TTAGATATATTTGTGGAGAT+TGG | 0.327866 | 2_2:+37823392 | Msa0250020:CDS |
TGCAAATTTGTTCAAGTACT+TGG | 0.329885 | 2_2:+37828076 | Msa0250020:CDS |
AATCAGGACAAGAATCTTCT+AGG | 0.335743 | 2_2:-37823508 | None:intergenic |
ACTTACTTGGATTTATTCCT+TGG | 0.340182 | 2_2:+37827192 | Msa0250020:CDS |
TCAATTCCGGGGTCTACATT+AGG | 0.343246 | 2_2:-37826931 | None:intergenic |
AATATTCCTCAAAGCTTGTT+TGG | 0.345806 | 2_2:-37826897 | None:intergenic |
AAATTTCCCACTTATATTGC+AGG | 0.345820 | 2_2:-37827218 | None:intergenic |
GCAATTCCTATTTCCAATAT+GGG | 0.346266 | 2_2:-37828412 | None:intergenic |
ACAGAAGCTGAAGAATATTC+TGG | 0.348230 | 2_2:+37820303 | Msa0250020:CDS |
TGAATTAAATTCAAAATAAT+CGG | 0.349101 | 2_2:-37827581 | None:intergenic |
TGTTGTTTACCTATAAAATT+CGG | 0.355958 | 2_2:-37825821 | None:intergenic |
TTCTTAATTGCCTTGACATC+AGG | 0.359018 | 2_2:-37828002 | None:intergenic |
ACTGAGTTATTCTGAGATAA+TGG | 0.365223 | 2_2:+37827450 | Msa0250020:CDS |
TGTGGAATAGAGTATGATTC+TGG | 0.367247 | 2_2:-37825443 | None:intergenic |
ATTTATAGCTCCTTCCTTCA+AGG | 0.370395 | 2_2:-37828203 | None:intergenic |
CTAAGCACAGAAAACTTACT+TGG | 0.371035 | 2_2:+37827179 | Msa0250020:CDS |
ACCATAAAATCATGGTTAGA+TGG | 0.374090 | 2_2:+37822984 | Msa0250020:CDS |
GGTAATATTGCTTTCGTGCT+TGG | 0.374335 | 2_2:-37827556 | None:intergenic |
CCTCAATCTTCCTGCAGAAA+TGG | 0.374444 | 2_2:+37827008 | Msa0250020:CDS |
GCTTGAAACGGGAGAAAGAT+AGG | 0.374850 | 2_2:+37823625 | Msa0250020:CDS |
CACCAACGTTGTACCTTCTT+CGG | 0.375640 | 2_2:-37824250 | None:intergenic |
GTTACTCTCAATTTCCTTGA+AGG | 0.383477 | 2_2:+37828189 | Msa0250020:three_prime_UTR |
TTATTTCTCCCACCCCATAT+TGG | 0.383729 | 2_2:+37828399 | Msa0250020:three_prime_UTR |
GGTTGCAGAGTTTGGTGTTA+AGG | 0.385080 | 2_2:+37820208 | Msa0250020:intron |
CTTCCTCCGCTTAATGAAGT+TGG | 0.395619 | 2_2:+37823058 | Msa0250020:CDS |
AGCCAGCCGATACTTGGATA+TGG | 0.398900 | 2_2:-37828243 | None:intergenic |
TTGCGTTACTTTAGTTTAAG+TGG | 0.403889 | 2_2:+37828431 | Msa0250020:three_prime_UTR |
TTCTAAAATACCCAAAGGCT+TGG | 0.406125 | 2_2:+37824071 | Msa0250020:CDS |
TGTGATAATATTCTCAAGAA+AGG | 0.408911 | 2_2:+37825618 | Msa0250020:CDS |
TATAATTAAGTAGGCCTAGA+TGG | 0.410312 | 2_2:+37828308 | Msa0250020:three_prime_UTR |
GGGGTGGGAGAAATAATTAA+TGG | 0.411150 | 2_2:-37828392 | None:intergenic |
TCAGAGCTGAACTGAGGTTC+AGG | 0.411217 | 2_2:-37820334 | None:intergenic |
TACAGTAGCCAGCCGATACT+TGG | 0.411984 | 2_2:-37828249 | None:intergenic |
CTTGTACTTGGCACATGATA+AGG | 0.420595 | 2_2:-37827518 | None:intergenic |
TTCCTCCGCTTAATGAAGTT+GGG | 0.422753 | 2_2:+37823059 | Msa0250020:CDS |
AGAAACCCTGATAAAGGTTT+CGG | 0.422836 | 2_2:-37819576 | None:intergenic |
AGCGGTTGGGAATAGTCATT+TGG | 0.424285 | 2_2:-37820500 | None:intergenic |
AATGTCTGCAGCCGGAGAAA+AGG | 0.425273 | 2_2:+37825248 | Msa0250020:intron |
GGAGATTGGAATGGGGCATA+TGG | 0.426092 | 2_2:+37823406 | Msa0250020:CDS |
CTTGTTAAGAATCTTGTACT+TGG | 0.426803 | 2_2:-37827530 | None:intergenic |
TAGCGAGCCCAAGTTATTAG+AGG | 0.429320 | 2_2:+37823671 | Msa0250020:CDS |
AGTAACTGTCAAGTCAATTC+CGG | 0.431096 | 2_2:-37826944 | None:intergenic |
TGCTTAAATATACTGGAAAC+AGG | 0.431414 | 2_2:-37824096 | None:intergenic |
GGAAACAGGATCCAAGCCTT+TGG | 0.432362 | 2_2:-37824082 | None:intergenic |
TAAAGAATCGTGCGCGATGA+TGG | 0.434250 | 2_2:-37819605 | None:intergenic |
AGTAAGAGAAACCCTGATAA+AGG | 0.435682 | 2_2:-37819582 | None:intergenic |
ATTCTCGAAAGGCTTCAAAC+TGG | 0.437747 | 2_2:+37823483 | Msa0250020:CDS |
GAAACAGGATCCAAGCCTTT+GGG | 0.444806 | 2_2:-37824081 | None:intergenic |
ATATTTGTGGAGATTGGAAT+GGG | 0.445460 | 2_2:+37823398 | Msa0250020:CDS |
AGGTCAAAAGATTTGTAACT+AGG | 0.446358 | 2_2:-37826988 | None:intergenic |
GTAACTGTCAAGTCAATTCC+GGG | 0.448288 | 2_2:-37826943 | None:intergenic |
ACAGTTACTGTTCTGACCAC+TGG | 0.451735 | 2_2:+37826958 | Msa0250020:CDS |
CAGAGTTTGGTGTTAAGGCT+AGG | 0.452903 | 2_2:+37820213 | Msa0250020:intron |
CGGAGAAAAGGGATATTGTT+GGG | 0.453652 | 2_2:+37825260 | Msa0250020:CDS |
AACCATAAAATGAGTGGGTA+TGG | 0.458748 | 2_2:+37828480 | Msa0250020:three_prime_UTR |
CTTACTTGGATTTATTCCTT+GGG | 0.459703 | 2_2:+37827193 | Msa0250020:CDS |
ATGTCTGCAGCCGGAGAAAA+GGG | 0.463275 | 2_2:+37825249 | Msa0250020:intron |
ATGTTTGCTCATGTTGGAAA+AGG | 0.465005 | 2_2:+37828273 | Msa0250020:three_prime_UTR |
ACTCCTCTCATGGTCATCAT+TGG | 0.466098 | 2_2:-37826685 | None:intergenic |
AGAATATACCTCTAATAACT+TGG | 0.467807 | 2_2:-37823679 | None:intergenic |
TTCTCATCCACAGGAGGAAG+AGG | 0.467931 | 2_2:-37827748 | None:intergenic |
GGCGGAGGAGTGCTTGAAAC+GGG | 0.472033 | 2_2:+37823614 | Msa0250020:intron |
CTCCATATCCAAGTATCGGC+TGG | 0.476819 | 2_2:+37828241 | Msa0250020:three_prime_UTR |
CTGTAAATGTTTGCTCATGT+TGG | 0.476983 | 2_2:+37828267 | Msa0250020:three_prime_UTR |
ACAAAATGTGGCAAGCAGTT+CGG | 0.477078 | 2_2:-37825598 | None:intergenic |
CCGGAGAAAAGGGATATTGT+TGG | 0.478111 | 2_2:+37825259 | Msa0250020:CDS |
TGTTTCCAGTATATTTAAGC+AGG | 0.481609 | 2_2:+37824098 | Msa0250020:CDS |
TGGTCAATTTACTTCAAAGA+TGG | 0.482034 | 2_2:+37826737 | Msa0250020:CDS |
TGGATCGATACTTTATTGCT+CGG | 0.482660 | 2_2:+37823029 | Msa0250020:CDS |
TATAAATATACCATTTCTGC+AGG | 0.482865 | 2_2:-37827018 | None:intergenic |
TATTGTTGGGTTACAAGAGC+AGG | 0.483324 | 2_2:+37825273 | Msa0250020:CDS |
AAATGTATTAGATATATTTG+TGG | 0.483791 | 2_2:+37823385 | Msa0250020:CDS |
CAAAATTTACAGACAAAATG+AGG | 0.486053 | 2_2:+37827602 | Msa0250020:CDS |
AATACCTTGAGCATATAATC+AGG | 0.490182 | 2_2:-37823524 | None:intergenic |
CTTGATCTCTCGAGACTACC+TGG | 0.495638 | 2_2:+37828037 | Msa0250020:CDS |
AACCGCTGTATGATAAGTAC+AGG | 0.495768 | 2_2:+37820516 | Msa0250020:CDS |
ATGGAGTGCGTTGAGCAGTT+AGG | 0.495951 | 2_2:+37827877 | Msa0250020:CDS |
CTCTCAATTTCCTTGAAGGA+AGG | 0.497162 | 2_2:+37828193 | Msa0250020:three_prime_UTR |
CCATTTCTGCAGGAAGATTG+AGG | 0.497896 | 2_2:-37827008 | None:intergenic |
AGGTTTACAAGGAAGTAAAT+GGG | 0.502271 | 2_2:+37823207 | Msa0250020:intron |
AGAGTTTGGTGTTAAGGCTA+GGG | 0.502465 | 2_2:+37820214 | Msa0250020:intron |
ACTGATTGTGACTACTTACC+AGG | 0.504108 | 2_2:+37827258 | Msa0250020:CDS |
TTGTTAAAATACTCCTCTCA+TGG | 0.505784 | 2_2:-37826695 | None:intergenic |
ATGCAGCATGTTACCGAAGA+AGG | 0.506218 | 2_2:+37824237 | Msa0250020:intron |
TATATTTGTGGAGATTGGAA+TGG | 0.508425 | 2_2:+37823397 | Msa0250020:CDS |
TACTTCAAAGATGGAAGGAA+TGG | 0.516259 | 2_2:+37826746 | Msa0250020:CDS |
AGGTACAACGTTGGTGAAGT+TGG | 0.516536 | 2_2:+37824257 | Msa0250020:CDS |
TAAGTACAGGGAGGCATTTG+AGG | 0.519320 | 2_2:+37820529 | Msa0250020:CDS |
GATCAGTTCTATAATTAAGT+AGG | 0.520022 | 2_2:+37828299 | Msa0250020:three_prime_UTR |
TTCTGCATATTATTCTCGAA+AGG | 0.520286 | 2_2:+37823472 | Msa0250020:CDS |
TGCGAGAACTTGTGAGGAGG+TGG | 0.525524 | 2_2:+37822957 | Msa0250020:CDS |
GGAGAACCAAACAAGCTTTG+AGG | 0.525529 | 2_2:+37826891 | Msa0250020:CDS |
TTGGGTACCTGCAATATAAG+TGG | 0.526090 | 2_2:+37827211 | Msa0250020:CDS |
GGTTGGGAATAGTCATTTGG+AGG | 0.527736 | 2_2:-37820497 | None:intergenic |
GTACTTATCATACAGCGGTT+GGG | 0.527755 | 2_2:-37820513 | None:intergenic |
TGTACTTATCATACAGCGGT+TGG | 0.527818 | 2_2:-37820514 | None:intergenic |
TCCTATTTCCAATATGGGGT+GGG | 0.527993 | 2_2:-37828407 | None:intergenic |
TTATCAATTCCAGGTTTACA+AGG | 0.528929 | 2_2:+37823196 | Msa0250020:intron |
CCTGATAAAGGTTTCGGTGA+AGG | 0.537083 | 2_2:-37819570 | None:intergenic |
TCGTGCTTCTCTCTCAAAGA+AGG | 0.537882 | 2_2:-37822923 | None:intergenic |
GAGAATATTATCACAAAATG+TGG | 0.541209 | 2_2:-37825610 | None:intergenic |
TTGTCCTGATTATATGCTCA+AGG | 0.542877 | 2_2:+37823520 | Msa0250020:CDS |
AGGCGGAGGAGTGCTTGAAA+CGG | 0.547934 | 2_2:+37823613 | Msa0250020:intron |
AAGTCATCAGATGTGAATGC+AGG | 0.552002 | 2_2:-37828356 | None:intergenic |
AGTAGTCACAATCAGTTCCA+TGG | 0.552172 | 2_2:-37827251 | None:intergenic |
TATTGATTTAGAACAAGGAT+GGG | 0.552691 | 2_2:+37820261 | Msa0250020:CDS |
GCAGATTCCTCTTCCTCCTG+TGG | 0.555922 | 2_2:+37827741 | Msa0250020:intron |
CTATTGATTTAGAACAAGGA+TGG | 0.556296 | 2_2:+37820260 | Msa0250020:CDS |
GAATATACCTCTAATAACTT+GGG | 0.556355 | 2_2:-37823678 | None:intergenic |
TTCCTATTTCCAATATGGGG+TGG | 0.557692 | 2_2:-37828408 | None:intergenic |
AGACAAAATGAGGAGGATCA+AGG | 0.560398 | 2_2:+37827612 | Msa0250020:CDS |
GTGGGCTAACCATAAAATCA+TGG | 0.561200 | 2_2:+37822976 | Msa0250020:CDS |
CTTCATAATACGCACAATTG+AGG | 0.561336 | 2_2:-37827821 | None:intergenic |
ACTTATATTGCAGGTACCCA+AGG | 0.565881 | 2_2:-37827209 | None:intergenic |
CGCACTCCATCACTAACTGT+TGG | 0.568475 | 2_2:-37827864 | None:intergenic |
CTTCACCGAAACCTTTATCA+GGG | 0.570432 | 2_2:+37819571 | Msa0250020:five_prime_UTR |
AACAGTCGTTCACATATGCC+AGG | 0.571635 | 2_2:-37825419 | None:intergenic |
AATTGAAGAAACACTTGAGA+AGG | 0.575640 | 2_2:+37825668 | Msa0250020:CDS |
CTTAGGTTGAAGACTTGTCA+AGG | 0.575826 | 2_2:+37824034 | Msa0250020:intron |
TGCAGAAGTGTCTTTGAGCA+TGG | 0.576831 | 2_2:-37823456 | None:intergenic |
TGGGCTCGCTACTAGAGTGC+AGG | 0.577235 | 2_2:-37823659 | None:intergenic |
TACAGATTTGACACTGGCAA+AGG | 0.577327 | 2_2:+37826870 | Msa0250020:CDS |
AAATTACCAACAGTTAGTGA+TGG | 0.577805 | 2_2:+37827858 | Msa0250020:CDS |
AAGCTGAAGAATATTCTGGA+AGG | 0.583829 | 2_2:+37820307 | Msa0250020:CDS |
CAAGTACAAGATTCTTAACA+AGG | 0.590535 | 2_2:+37827531 | Msa0250020:CDS |
CAATTTACTTCAAAGATGGA+AGG | 0.590929 | 2_2:+37826741 | Msa0250020:CDS |
CTTGAAACGGGAGAAAGATA+GGG | 0.592854 | 2_2:+37823626 | Msa0250020:CDS |
AGAACATACAAGAGAAATCA+CGG | 0.593996 | 2_2:-37823243 | None:intergenic |
CAATTCCTATTTCCAATATG+GGG | 0.598728 | 2_2:-37828411 | None:intergenic |
AGGGATTATCGATGAGTGAA+CGG | 0.601104 | 2_2:+37820233 | Msa0250020:exon |
TTAAATTCAAAATAATCGGT+AGG | 0.601478 | 2_2:-37827577 | None:intergenic |
AGCTGAAGAATATTCTGGAA+GGG | 0.602844 | 2_2:+37820308 | Msa0250020:CDS |
GTCAGCCCAACTTCATTAAG+CGG | 0.606052 | 2_2:-37823064 | None:intergenic |
AAGATTGATCAAGAACGTGA+AGG | 0.609119 | 2_2:+37823335 | Msa0250020:intron |
AGATGCAGCAAGTAACAAGA+AGG | 0.609700 | 2_2:+37824284 | Msa0250020:CDS |
GCAGATAGCAAAACAAGATG+AGG | 0.611050 | 2_2:+37828140 | Msa0250020:three_prime_UTR |
AAGACTATTGATTTAGAACA+AGG | 0.613435 | 2_2:+37820256 | Msa0250020:CDS |
TGGGTACCTGCAATATAAGT+GGG | 0.615117 | 2_2:+37827212 | Msa0250020:CDS |
AGTTATTGAGGATGTTGACA+AGG | 0.621478 | 2_2:+37827777 | Msa0250020:CDS |
TTATGTTGCGAGAACTTGTG+AGG | 0.624498 | 2_2:+37822951 | Msa0250020:CDS |
AATAATCCTAATGTAGACCC+CGG | 0.627294 | 2_2:+37826925 | Msa0250020:CDS |
GATAATATTCTCAAGAAAGG+CGG | 0.632646 | 2_2:+37825621 | Msa0250020:CDS |
TGCATTACTTAGAGATGACA+AGG | 0.635739 | 2_2:+37823932 | Msa0250020:CDS |
AGAATAACTCAGTCTATCTG+AGG | 0.636581 | 2_2:-37827440 | None:intergenic |
ATCGATACTTTATTGCTCGG+AGG | 0.640352 | 2_2:+37823032 | Msa0250020:CDS |
ACAAAATTGAAGCAACAATG+TGG | 0.645513 | 2_2:+37826714 | Msa0250020:CDS |
TTGTGCGTATTATGAAGAGT+CGG | 0.646014 | 2_2:+37827827 | Msa0250020:CDS |
GCGTATTATGAAGAGTCGGA+AGG | 0.646046 | 2_2:+37827831 | Msa0250020:CDS |
TATCCTATAGGCTCTTAAGG+AGG | 0.649623 | 2_2:+37825530 | Msa0250020:intron |
ATGTCAAGGCAATTAAGAAG+CGG | 0.652248 | 2_2:+37828006 | Msa0250020:CDS |
AGCCCAACTTCATTAAGCGG+AGG | 0.655556 | 2_2:-37823061 | None:intergenic |
TGAGCTGCATGACAAGTACC+TGG | 0.655887 | 2_2:+37825401 | Msa0250020:CDS |
AAATATATACCTTAAACATG+CGG | 0.656922 | 2_2:-37827900 | None:intergenic |
ATAGCAAAACAAGATGAGGA+TGG | 0.657624 | 2_2:+37828144 | Msa0250020:three_prime_UTR |
GTTTGCGCAGCCTGATGTCA+AGG | 0.659356 | 2_2:+37827992 | Msa0250020:intron |
TATTTGTGGAGATTGGAATG+GGG | 0.661334 | 2_2:+37823399 | Msa0250020:CDS |
TCAGGTTACAGATTTGACAC+TGG | 0.667474 | 2_2:+37826864 | Msa0250020:intron |
GCGAGAACTTGTGAGGAGGT+GGG | 0.667854 | 2_2:+37822958 | Msa0250020:CDS |
GTGCCAATGATGACCATGAG+AGG | 0.678765 | 2_2:+37826682 | Msa0250020:CDS |
TCCCTGTACTTATCATACAG+CGG | 0.679899 | 2_2:-37820518 | None:intergenic |
AAATTGAAGCAACAATGTGG+TGG | 0.685406 | 2_2:+37826717 | Msa0250020:CDS |
CGCAACGCACCATAGAAGTG+AGG | 0.687081 | 2_2:-37828517 | None:intergenic |
TGAACCTCAGTTCAGCTCTG+AGG | 0.696799 | 2_2:+37820336 | Msa0250020:CDS |
TGTTGCGAGAACTTGTGAGG+AGG | 0.698023 | 2_2:+37822954 | Msa0250020:CDS |
ACCGCTGTATGATAAGTACA+GGG | 0.699917 | 2_2:+37820517 | Msa0250020:CDS |
TAGTCCTCAGAGCTGAACTG+AGG | 0.701236 | 2_2:-37820340 | None:intergenic |
AATTTACAGACAAAATGAGG+AGG | 0.707626 | 2_2:+37827605 | Msa0250020:CDS |
GTAACTAGGCCAGAAACCAG+TGG | 0.710105 | 2_2:-37826974 | None:intergenic |
GAATCATACTCTATTCCACA+AGG | 0.714768 | 2_2:+37825446 | Msa0250020:CDS |
TACCGAAGAAGGTACAACGT+TGG | 0.733065 | 2_2:+37824248 | Msa0250020:CDS |
TAACTGTCAAGTCAATTCCG+GGG | 0.734741 | 2_2:-37826942 | None:intergenic |
GCTGTATGATAAGTACAGGG+AGG | 0.780823 | 2_2:+37820520 | Msa0250020:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTTTAAAATTTTTAT+TGG | + | chr2_2:37819792-37819811 | Msa0250020:intron | 0.0% |
!!! | TTATCATTATTTTGATTTTT+TGG | + | chr2_2:37820104-37820123 | Msa0250020:intron | 10.0% |
!!! | TGTTTTAGTTTTATATTAAT+TGG | + | chr2_2:37820394-37820413 | Msa0250020:intron | 10.0% |
!!! | GTTTTAGTTTTATATTAATT+GGG | + | chr2_2:37820395-37820414 | Msa0250020:intron | 10.0% |
!! | TTTGTAAAAAAAAAAAATAC+CGG | + | chr2_2:37821611-37821630 | Msa0250020:intron | 10.0% |
!! | TGAATTAAATTCAAAATAAT+CGG | - | chr2_2:37827584-37827603 | None:intergenic | 10.0% |
!!! | TTGATTTTTTGGTTTAAATT+TGG | + | chr2_2:37820115-37820134 | Msa0250020:intron | 15.0% |
!!! | TTTTGTTTGTTTTGATTTTT+TGG | + | chr2_2:37820142-37820161 | Msa0250020:intron | 15.0% |
!!! | ATGTCTATTTTTTACATTAT+AGG | + | chr2_2:37820832-37820851 | Msa0250020:intron | 15.0% |
!!! | TGTCTATTTTTTACATTATA+GGG | + | chr2_2:37820833-37820852 | Msa0250020:intron | 15.0% |
!! | TTGTAAAAAAAAAAAATACC+GGG | + | chr2_2:37821612-37821631 | Msa0250020:intron | 15.0% |
!!! | ATGAAATGATTTATTTTTCT+TGG | + | chr2_2:37822710-37822729 | Msa0250020:intron | 15.0% |
!!! | TGAAATGATTTATTTTTCTT+GGG | + | chr2_2:37822711-37822730 | Msa0250020:intron | 15.0% |
!!! | TTTTTTTTTTTATCAATTCC+AGG | + | chr2_2:37823187-37823206 | Msa0250020:intron | 15.0% |
!! | AAATGTATTAGATATATTTG+TGG | + | chr2_2:37823385-37823404 | Msa0250020:CDS | 15.0% |
!!! | GAAATTATAATTTTCAACTT+AGG | + | chr2_2:37824526-37824545 | Msa0250020:intron | 15.0% |
!!! | AAGACTTCTATATAATTTTA+AGG | + | chr2_2:37824897-37824916 | Msa0250020:intron | 15.0% |
!!! | ATAATTTTAAGGATTCATTA+AGG | + | chr2_2:37824908-37824927 | Msa0250020:intron | 15.0% |
!!! | TAATTTTAAGGATTCATTAA+GGG | + | chr2_2:37824909-37824928 | Msa0250020:intron | 15.0% |
!! | AAAAATGAAAAAAAGATCTT+GGG | - | chr2_2:37826042-37826061 | None:intergenic | 15.0% |
!! | AAAAAATGAAAAAAAGATCT+TGG | - | chr2_2:37826043-37826062 | None:intergenic | 15.0% |
!!! | AATACTTTTTATCTAAATCT+AGG | - | chr2_2:37827084-37827103 | None:intergenic | 15.0% |
!!! | TTTATTGGTTAGTTGAATTT+TGG | + | chr2_2:37819807-37819826 | Msa0250020:intron | 20.0% |
!!! | TTGATTGTTTAGTTGAATTT+TGG | + | chr2_2:37819938-37819957 | Msa0250020:intron | 20.0% |
!!! | TGATTGTTTAGTTGAATTTT+GGG | + | chr2_2:37819939-37819958 | Msa0250020:intron | 20.0% |
!!! | TTTCATTGTTGTTGAAATTT+AGG | + | chr2_2:37819996-37820015 | Msa0250020:intron | 20.0% |
!! | TTGAAATTTAGGAACAATTA+GGG | + | chr2_2:37820007-37820026 | Msa0250020:intron | 20.0% |
!!! | TTGATTTTTTGGTTGAAATT+TGG | + | chr2_2:37820153-37820172 | Msa0250020:intron | 20.0% |
!!! | TTTATGTTTTAACGAATTTG+TGG | + | chr2_2:37820179-37820198 | Msa0250020:intron | 20.0% |
!!! | AATTTAAAATACAATCAGAC+AGG | - | chr2_2:37820614-37820633 | None:intergenic | 20.0% |
!!! | ATTATTTCTTAATCTGGATT+GGG | + | chr2_2:37821677-37821696 | Msa0250020:intron | 20.0% |
!! | ATGTATTCTTATTGTGTAAA+TGG | + | chr2_2:37821974-37821993 | Msa0250020:intron | 20.0% |
!!! | TTATGATTTAAGACAGAATT+GGG | - | chr2_2:37822368-37822387 | None:intergenic | 20.0% |
!! | TTAGTTAACTTACTAATAGT+TGG | + | chr2_2:37822445-37822464 | Msa0250020:intron | 20.0% |
!!! | GAAATGATTTATTTTTCTTG+GGG | + | chr2_2:37822712-37822731 | Msa0250020:intron | 20.0% |
!!! | AAATGATTTATTTTTCTTGG+GGG | + | chr2_2:37822713-37822732 | Msa0250020:intron | 20.0% |
!! | TACATAATCAAAGGAAAAAA+CGG | - | chr2_2:37822833-37822852 | None:intergenic | 20.0% |
!! | ATTAACAGATACATAATCAA+AGG | - | chr2_2:37822842-37822861 | None:intergenic | 20.0% |
!!! | ATAACTGAAATTCACTTTTT+GGG | + | chr2_2:37822888-37822907 | Msa0250020:intron | 20.0% |
!! | AAACAGAAGCTAAATAATAT+TGG | - | chr2_2:37823573-37823592 | None:intergenic | 20.0% |
!! | ACATTTCACAAAGAAAAAAA+AGG | - | chr2_2:37823834-37823853 | None:intergenic | 20.0% |
!!! | ATTTTGACAACATATATAGA+AGG | - | chr2_2:37824153-37824172 | None:intergenic | 20.0% |
!! | TCTATATATGTTGTCAAAAT+TGG | + | chr2_2:37824153-37824172 | Msa0250020:intron | 20.0% |
!! | CTATATATGTTGTCAAAATT+GGG | + | chr2_2:37824154-37824173 | Msa0250020:intron | 20.0% |
!! | TATATATGTTGTCAAAATTG+GGG | + | chr2_2:37824155-37824174 | Msa0250020:intron | 20.0% |
!!! | TGATTGATAATTTTCAACTT+AGG | + | chr2_2:37824460-37824479 | Msa0250020:intron | 20.0% |
!!! | TGTATATTATTTTCTGTTAC+TGG | + | chr2_2:37824483-37824502 | Msa0250020:intron | 20.0% |
!!! | AAGATTATTACTATTTTGCT+TGG | - | chr2_2:37824825-37824844 | None:intergenic | 20.0% |
!! | ATTCATTAAGGGAATATAAA+AGG | + | chr2_2:37824920-37824939 | Msa0250020:intron | 20.0% |
!! | TATTATAAACATAAACTGTG+GGG | - | chr2_2:37825080-37825099 | None:intergenic | 20.0% |
!! | CTATTATAAACATAAACTGT+GGG | - | chr2_2:37825081-37825100 | None:intergenic | 20.0% |
!! | TTGCAGTTAAACTATAAAAT+TGG | - | chr2_2:37825314-37825333 | None:intergenic | 20.0% |
!! | AATTGATATTGATCCATTTA+TGG | + | chr2_2:37825332-37825351 | Msa0250020:intron | 20.0% |
!!! | ATTTCTTTTTATCTATTTGC+AGG | + | chr2_2:37825756-37825775 | Msa0250020:intron | 20.0% |
!!! | TGTTGTTTACCTATAAAATT+CGG | - | chr2_2:37825824-37825843 | None:intergenic | 20.0% |
!! | TGATAATAGAAATCTCATAT+TGG | - | chr2_2:37826013-37826032 | None:intergenic | 20.0% |
!! | AAAATGAAAAAAAGATCTTG+GGG | - | chr2_2:37826041-37826060 | None:intergenic | 20.0% |
!!! | AATTTTTATTTAGCCCTTTA+AGG | - | chr2_2:37826142-37826161 | None:intergenic | 20.0% |
!!! | GAAAAACTATTAAAAGCATA+TGG | - | chr2_2:37826274-37826293 | None:intergenic | 20.0% |
!!! | ATTTTTGGAAAAGAAAAAAC+TGG | + | chr2_2:37826330-37826349 | Msa0250020:intron | 20.0% |
!! | AAAATACAAACAAAACTGTA+AGG | - | chr2_2:37826451-37826470 | None:intergenic | 20.0% |
!! | AGAAAATTCCATTGTTTATT+TGG | + | chr2_2:37826835-37826854 | Msa0250020:intron | 20.0% |
!! | GAAAATTCCATTGTTTATTT+GGG | + | chr2_2:37826836-37826855 | Msa0250020:intron | 20.0% |
!!! | CTGTTCTCTTTATTTATTTT+AGG | + | chr2_2:37827114-37827133 | Msa0250020:intron | 20.0% |
!! | TTAAATTCAAAATAATCGGT+AGG | - | chr2_2:37827580-37827599 | None:intergenic | 20.0% |
!! | AAATATATACCTTAAACATG+CGG | - | chr2_2:37827903-37827922 | None:intergenic | 20.0% |
!! | TTAAAAACCATAAAATGAGT+GGG | + | chr2_2:37828475-37828494 | Msa0250020:three_prime_UTR | 20.0% |
!!! | GATTTGTTTTGTTATGCTTA+TGG | + | chr2_2:37819655-37819674 | Msa0250020:intron | 25.0% |
!!! | TGGTTTTGTTATACTAGATT+TGG | + | chr2_2:37819675-37819694 | Msa0250020:intron | 25.0% |
! | TTGGTTAAATCTGAGAATTT+AGG | + | chr2_2:37819694-37819713 | Msa0250020:intron | 25.0% |
! | TGGTTAAATCTGAGAATTTA+GGG | + | chr2_2:37819695-37819714 | Msa0250020:intron | 25.0% |
! | ATGTTTATTGCGATTTCATT+CGG | + | chr2_2:37819744-37819763 | Msa0250020:intron | 25.0% |
!!! | GGAATTTGATTTGAGAATTT+AGG | + | chr2_2:37819828-37819847 | Msa0250020:intron | 25.0% |
!! | TGAGAATTTAGGATTTAGTT+TGG | + | chr2_2:37819839-37819858 | Msa0250020:intron | 25.0% |
!! | GAGAATTTAGGATTTAGTTT+GGG | + | chr2_2:37819840-37819859 | Msa0250020:intron | 25.0% |
!!! | AGAATTTAGGATTTAGTTTG+GGG | + | chr2_2:37819841-37819860 | Msa0250020:intron | 25.0% |
! | GTTGAAATTTAGGAACAATT+AGG | + | chr2_2:37820006-37820025 | Msa0250020:intron | 25.0% |
! | TGAAATTTAGGAACAATTAG+GGG | + | chr2_2:37820008-37820027 | Msa0250020:intron | 25.0% |
! | TTAACGAATTTGTGGAAATT+TGG | + | chr2_2:37820187-37820206 | Msa0250020:intron | 25.0% |
!!! | AAGACTATTGATTTAGAACA+AGG | + | chr2_2:37820256-37820275 | Msa0250020:CDS | 25.0% |
!!! | TATTGATTTAGAACAAGGAT+GGG | + | chr2_2:37820261-37820280 | Msa0250020:CDS | 25.0% |
!! | TTTTTACATTATAGGGCTAT+TGG | + | chr2_2:37820840-37820859 | Msa0250020:intron | 25.0% |
!! | TCCTCAACAAAATAATGTTT+TGG | + | chr2_2:37821034-37821053 | Msa0250020:intron | 25.0% |
!!! | TCCAAAACATTATTTTGTTG+AGG | - | chr2_2:37821038-37821057 | None:intergenic | 25.0% |
!!! | TTGATTTTTGAGTAAGTAGT+TGG | + | chr2_2:37821094-37821113 | Msa0250020:intron | 25.0% |
!! | GATTATTTCTTAATCTGGAT+TGG | + | chr2_2:37821676-37821695 | Msa0250020:intron | 25.0% |
! | CTGCTTCAATTTAGAAAAAT+AGG | - | chr2_2:37821725-37821744 | None:intergenic | 25.0% |
!!! | TGGGTTTTATTTATATAACC+TGG | - | chr2_2:37821754-37821773 | None:intergenic | 25.0% |
! | AGGTTATATAAATAAAACCC+AGG | + | chr2_2:37821753-37821772 | Msa0250020:intron | 25.0% |
!!! | GTACACTTTTTCGTATTAAT+AGG | + | chr2_2:37822161-37822180 | Msa0250020:intron | 25.0% |
!! | CTTATGATTTAAGACAGAAT+TGG | - | chr2_2:37822369-37822388 | None:intergenic | 25.0% |
!! | CTTTTAGGCAGTAATAAAAA+AGG | - | chr2_2:37822628-37822647 | None:intergenic | 25.0% |
!!! | AATGATTTATTTTTCTTGGG+GGG | + | chr2_2:37822714-37822733 | Msa0250020:intron | 25.0% |
!!! | CATAACTGAAATTCACTTTT+TGG | + | chr2_2:37822887-37822906 | Msa0250020:intron | 25.0% |
! | ATCTTTAAACAAAAGAGGAT+AGG | - | chr2_2:37823320-37823339 | None:intergenic | 25.0% |
! | GATCAATCTTTAAACAAAAG+AGG | - | chr2_2:37823325-37823344 | None:intergenic | 25.0% |
! | TTAGATATATTTGTGGAGAT+TGG | + | chr2_2:37823392-37823411 | Msa0250020:CDS | 25.0% |
! | TTAGCTTCTGTTTAATATTG+TGG | + | chr2_2:37823580-37823599 | Msa0250020:intron | 25.0% |
! | GAATATACCTCTAATAACTT+GGG | - | chr2_2:37823681-37823700 | None:intergenic | 25.0% |
! | AGAATATACCTCTAATAACT+TGG | - | chr2_2:37823682-37823701 | None:intergenic | 25.0% |
!!! | AATGTTCTTTTTCAAGAAGT+TGG | - | chr2_2:37823902-37823921 | None:intergenic | 25.0% |
! | ATTGTAACACAAATTTGAAC+AGG | - | chr2_2:37824414-37824433 | None:intergenic | 25.0% |
! | AAATGACACTAAATATGACA+AGG | - | chr2_2:37824608-37824627 | None:intergenic | 25.0% |
! | TGTTTACGCATAAATTCAAA+AGG | + | chr2_2:37824771-37824790 | Msa0250020:intron | 25.0% |
!! | GCTTGGTAATAACATTTATA+AGG | - | chr2_2:37824808-37824827 | None:intergenic | 25.0% |
! | ATTATAAACATAAACTGTGG+GGG | - | chr2_2:37825079-37825098 | None:intergenic | 25.0% |
! | CCTATTATAAACATAAACTG+TGG | - | chr2_2:37825082-37825101 | None:intergenic | 25.0% |
! | CCACAGTTTATGTTTATAAT+AGG | + | chr2_2:37825079-37825098 | Msa0250020:intron | 25.0% |
!! | AAAGAAAATTTTGTCCGATA+AGG | - | chr2_2:37825116-37825135 | None:intergenic | 25.0% |
! | ATGTAAAGCACAAAATCAAA+CGG | - | chr2_2:37825181-37825200 | None:intergenic | 25.0% |
!! | TCTGAAAGATTTTATCCTAT+AGG | + | chr2_2:37825518-37825537 | Msa0250020:intron | 25.0% |
!!! | TTTTGAGATATTTTGCAACA+AGG | + | chr2_2:37825554-37825573 | Msa0250020:CDS | 25.0% |
!!! | TTTGAGATATTTTGCAACAA+GGG | + | chr2_2:37825555-37825574 | Msa0250020:CDS | 25.0% |
! | GAGAATATTATCACAAAATG+TGG | - | chr2_2:37825613-37825632 | None:intergenic | 25.0% |
! | TGTGATAATATTCTCAAGAA+AGG | + | chr2_2:37825618-37825637 | Msa0250020:CDS | 25.0% |
! | AATCATCAAGTTTAAGCATA+TGG | - | chr2_2:37825719-37825738 | None:intergenic | 25.0% |
!! | ATTTGTTTGCCGAATTTTAT+AGG | + | chr2_2:37825812-37825831 | Msa0250020:CDS | 25.0% |
! | ATAGGTAAACAACATAGAAA+AGG | + | chr2_2:37825830-37825849 | Msa0250020:intron | 25.0% |
! | TCCAAAAGATTTAAACCATT+TGG | + | chr2_2:37825940-37825959 | Msa0250020:intron | 25.0% |
!! | TCCAAATGGTTTAAATCTTT+TGG | - | chr2_2:37825944-37825963 | None:intergenic | 25.0% |
! | ATCTCATATTGGACAAAATA+GGG | - | chr2_2:37826002-37826021 | None:intergenic | 25.0% |
! | AATCTCATATTGGACAAAAT+AGG | - | chr2_2:37826003-37826022 | None:intergenic | 25.0% |
! | AAATGAAAAAAAGATCTTGG+GGG | - | chr2_2:37826040-37826059 | None:intergenic | 25.0% |
!!! | GAAAGTCGATAGTTATTTTT+GGG | + | chr2_2:37826111-37826130 | Msa0250020:intron | 25.0% |
!!! | AAAGTCGATAGTTATTTTTG+GGG | + | chr2_2:37826112-37826131 | Msa0250020:intron | 25.0% |
!!! | TTTGCTGTTCTGTTAATATA+AGG | + | chr2_2:37826367-37826386 | Msa0250020:intron | 25.0% |
! | ATGACATTGTTGAATCTTTA+TGG | + | chr2_2:37826480-37826499 | Msa0250020:intron | 25.0% |
! | TATAAATATACCATTTCTGC+AGG | - | chr2_2:37827021-37827040 | None:intergenic | 25.0% |
! | TATGCATAAGAAATATAACC+TGG | - | chr2_2:37827279-37827298 | None:intergenic | 25.0% |
! | GATATGTACAAATTCTTGTA+TGG | + | chr2_2:37827348-37827367 | Msa0250020:intron | 25.0% |
!!! | GTTGTGTTTTGCTTTTTAAT+AGG | + | chr2_2:37827393-37827412 | Msa0250020:intron | 25.0% |
! | CAAAATTTACAGACAAAATG+AGG | + | chr2_2:37827602-37827621 | Msa0250020:CDS | 25.0% |
! | TGAGAAGAAAAAAGTTATTG+AGG | + | chr2_2:37827765-37827784 | Msa0250020:CDS | 25.0% |
! | ACAAAACAATGTCATAAAAG+GGG | - | chr2_2:37827928-37827947 | None:intergenic | 25.0% |
! | GACAAAACAATGTCATAAAA+GGG | - | chr2_2:37827929-37827948 | None:intergenic | 25.0% |
!!! | CTTTTATGACATTGTTTTGT+CGG | + | chr2_2:37827928-37827947 | Msa0250020:intron | 25.0% |
! | TATAATCCTGAATTGTGATA+TGG | + | chr2_2:37827962-37827981 | Msa0250020:intron | 25.0% |
! | GATCAGTTCTATAATTAAGT+AGG | + | chr2_2:37828299-37828318 | Msa0250020:three_prime_UTR | 25.0% |
! | CTTAAAAACCATAAAATGAG+TGG | + | chr2_2:37828474-37828493 | Msa0250020:three_prime_UTR | 25.0% |
! | TGAGAATTTAGGGTTTAGTT+TGG | + | chr2_2:37819705-37819724 | Msa0250020:intron | 30.0% |
! | GAGAATTTAGGGTTTAGTTT+GGG | + | chr2_2:37819706-37819725 | Msa0250020:intron | 30.0% |
!! | AGAATTTAGGGTTTAGTTTG+GGG | + | chr2_2:37819707-37819726 | Msa0250020:intron | 30.0% |
!! | GAATTTAGGATTTAGTTTGG+GGG | + | chr2_2:37819842-37819861 | Msa0250020:intron | 30.0% |
!! | AATTTAGGATTTAGTTTGGG+GGG | + | chr2_2:37819843-37819862 | Msa0250020:intron | 30.0% |
TTACTGCAATTTCATTCAGT+TGG | + | chr2_2:37819884-37819903 | Msa0250020:intron | 30.0% | |
!! | CTATTGATTTAGAACAAGGA+TGG | + | chr2_2:37820260-37820279 | Msa0250020:CDS | 30.0% |
! | TTGTTTGCAACTTTTCTACT+AGG | + | chr2_2:37820757-37820776 | Msa0250020:intron | 30.0% |
! | TGTTTGCAACTTTTCTACTA+GGG | + | chr2_2:37820758-37820777 | Msa0250020:intron | 30.0% |
! | TGACGCATTTTCTTCTTTTT+AGG | + | chr2_2:37820941-37820960 | Msa0250020:intron | 30.0% |
!! | AAAGTAGTTGGTAGCAAAAA+GGG | - | chr2_2:37821314-37821333 | None:intergenic | 30.0% |
! | AATAGTGGTTTGTCCAAATT+CGG | + | chr2_2:37821553-37821572 | Msa0250020:intron | 30.0% |
! | TTTTCTAAATTGAAGCAGCT+TGG | + | chr2_2:37821727-37821746 | Msa0250020:intron | 30.0% |
!!! | CCGTTTTCATTTTAAAACCT+GGG | - | chr2_2:37821773-37821792 | None:intergenic | 30.0% |
!!! | CCCAGGTTTTAAAATGAAAA+CGG | + | chr2_2:37821770-37821789 | Msa0250020:intron | 30.0% |
!!! | TCCGTTTTCATTTTAAAACC+TGG | - | chr2_2:37821774-37821793 | None:intergenic | 30.0% |
!!! | GGTTTTAAAATGAAAACGGA+AGG | + | chr2_2:37821774-37821793 | Msa0250020:intron | 30.0% |
AAGTAACTGAACTAAAACAG+AGG | - | chr2_2:37821948-37821967 | None:intergenic | 30.0% | |
TCATGTTCTTCATGAACTTA+TGG | + | chr2_2:37822023-37822042 | Msa0250020:intron | 30.0% | |
! | TGATCCAGATCTCTAAATTT+TGG | + | chr2_2:37822259-37822278 | Msa0250020:intron | 30.0% |
GATTCCAAAATTTAGAGATC+TGG | - | chr2_2:37822266-37822285 | None:intergenic | 30.0% | |
TAACTAAAGCTAGTTAGAGA+GGG | - | chr2_2:37822432-37822451 | None:intergenic | 30.0% | |
TTAACTAAAGCTAGTTAGAG+AGG | - | chr2_2:37822433-37822452 | None:intergenic | 30.0% | |
TTATAGCGTCATTAGTTGAT+TGG | + | chr2_2:37822530-37822549 | Msa0250020:intron | 30.0% | |
TGTGTCTCTTAAAATTTGAC+TGG | + | chr2_2:37822581-37822600 | Msa0250020:intron | 30.0% | |
ACCATAAAATCATGGTTAGA+TGG | + | chr2_2:37822984-37823003 | Msa0250020:CDS | 30.0% | |
TTCTCGTTTCTTTCACTATT+TGG | + | chr2_2:37823009-37823028 | Msa0250020:CDS | 30.0% | |
CTACTAATAGAAAACTCTGA+AGG | - | chr2_2:37823122-37823141 | None:intergenic | 30.0% | |
TTATCAATTCCAGGTTTACA+AGG | + | chr2_2:37823196-37823215 | Msa0250020:intron | 30.0% | |
AGGTTTACAAGGAAGTAAAT+GGG | + | chr2_2:37823207-37823226 | Msa0250020:intron | 30.0% | |
AGAACATACAAGAGAAATCA+CGG | - | chr2_2:37823246-37823265 | None:intergenic | 30.0% | |
TATATTTGTGGAGATTGGAA+TGG | + | chr2_2:37823397-37823416 | Msa0250020:CDS | 30.0% | |
ATATTTGTGGAGATTGGAAT+GGG | + | chr2_2:37823398-37823417 | Msa0250020:CDS | 30.0% | |
TTCTGCATATTATTCTCGAA+AGG | + | chr2_2:37823472-37823491 | Msa0250020:CDS | 30.0% | |
AATACCTTGAGCATATAATC+AGG | - | chr2_2:37823527-37823546 | None:intergenic | 30.0% | |
AATATTGTGGCATTCATTAC+AGG | + | chr2_2:37823593-37823612 | Msa0250020:intron | 30.0% | |
! | TTGCTATTATTCCAGCTATT+TGG | + | chr2_2:37823701-37823720 | Msa0250020:intron | 30.0% |
CTTCTTGAAAAAGAACATTC+TGG | + | chr2_2:37823903-37823922 | Msa0250020:CDS | 30.0% | |
GGTACTATTTAAGCGTAATA+TGG | + | chr2_2:37823953-37823972 | Msa0250020:intron | 30.0% | |
TCTTCAACCTAAGCATTTAA+AGG | - | chr2_2:37824027-37824046 | None:intergenic | 30.0% | |
!!! | CTCTTTTCTAAAATACCCAA+AGG | + | chr2_2:37824066-37824085 | Msa0250020:CDS | 30.0% |
TGCTTAAATATACTGGAAAC+AGG | - | chr2_2:37824099-37824118 | None:intergenic | 30.0% | |
TGTTTCCAGTATATTTAAGC+AGG | + | chr2_2:37824098-37824117 | Msa0250020:CDS | 30.0% | |
! | TTTGTAGTTGTCCTTATTTC+TGG | + | chr2_2:37824318-37824337 | Msa0250020:intron | 30.0% |
! | CTTTTCTATTGCAATAATCG+AGG | + | chr2_2:37824353-37824372 | Msa0250020:intron | 30.0% |
AAAACTAGTACCGCAATAAT+CGG | + | chr2_2:37824376-37824395 | Msa0250020:intron | 30.0% | |
! | TTTACACAGAGTGTTAAGAT+AGG | - | chr2_2:37824693-37824712 | None:intergenic | 30.0% |
TCTTAACACTCTGTGTAAAT+TGG | + | chr2_2:37824694-37824713 | Msa0250020:intron | 30.0% | |
TTATAAACATAAACTGTGGG+GGG | - | chr2_2:37825078-37825097 | None:intergenic | 30.0% | |
GGTAAATTGTTTGCAAAATG+AGG | - | chr2_2:37825151-37825170 | None:intergenic | 30.0% | |
TAAATTAAAATGTCTGCAGC+CGG | + | chr2_2:37825240-37825259 | Msa0250020:intron | 30.0% | |
ATTATACGATCATAACCTTG+TGG | - | chr2_2:37825464-37825483 | None:intergenic | 30.0% | |
! | TTTTATCCTATAGGCTCTTA+AGG | + | chr2_2:37825527-37825546 | Msa0250020:intron | 30.0% |
GATAATATTCTCAAGAAAGG+CGG | + | chr2_2:37825621-37825640 | Msa0250020:CDS | 30.0% | |
AATTGAAGAAACACTTGAGA+AGG | + | chr2_2:37825668-37825687 | Msa0250020:CDS | 30.0% | |
ACAAAATAGGGAAAACTAAC+GGG | - | chr2_2:37825990-37826009 | None:intergenic | 30.0% | |
GACAAAATAGGGAAAACTAA+CGG | - | chr2_2:37825991-37826010 | None:intergenic | 30.0% | |
!! | GGAAAGTCGATAGTTATTTT+TGG | + | chr2_2:37826110-37826129 | Msa0250020:intron | 30.0% |
!! | ATTTTTGGGGAAAACCTTAA+AGG | + | chr2_2:37826125-37826144 | Msa0250020:intron | 30.0% |
!! | TTTTTGGGGAAAACCTTAAA+GGG | + | chr2_2:37826126-37826145 | Msa0250020:intron | 30.0% |
GATATTAAAAGAGATAGCGA+TGG | + | chr2_2:37826167-37826186 | Msa0250020:intron | 30.0% | |
GAAAGTGAACTGCAATTAAT+TGG | + | chr2_2:37826211-37826230 | Msa0250020:intron | 30.0% | |
!!! | GCAGACTGTTTTAGAATTTT+TGG | + | chr2_2:37826315-37826334 | Msa0250020:intron | 30.0% |
GGAAAAGAAAAAACTGGATA+TGG | + | chr2_2:37826336-37826355 | Msa0250020:intron | 30.0% | |
TAATTAACCGAAACCCAAAA+AGG | - | chr2_2:37826423-37826442 | None:intergenic | 30.0% | |
TTATGAAAGTGAGTTCCATT+AGG | - | chr2_2:37826589-37826608 | None:intergenic | 30.0% | |
ATAATATCATACATCTTGCC+TGG | + | chr2_2:37826614-37826633 | Msa0250020:intron | 30.0% | |
TTGTTAAAATACTCCTCTCA+TGG | - | chr2_2:37826698-37826717 | None:intergenic | 30.0% | |
ACAAAATTGAAGCAACAATG+TGG | + | chr2_2:37826714-37826733 | Msa0250020:CDS | 30.0% | |
TGGTCAATTTACTTCAAAGA+TGG | + | chr2_2:37826737-37826756 | Msa0250020:CDS | 30.0% | |
CAATTTACTTCAAAGATGGA+AGG | + | chr2_2:37826741-37826760 | Msa0250020:CDS | 30.0% | |
GATAGAACCCAAATAAACAA+TGG | - | chr2_2:37826846-37826865 | None:intergenic | 30.0% | |
! | TTGTTTATTTGGGTTCTATC+AGG | + | chr2_2:37826846-37826865 | Msa0250020:intron | 30.0% |
! | AATATTCCTCAAAGCTTGTT+TGG | - | chr2_2:37826900-37826919 | None:intergenic | 30.0% |
AGGTCAAAAGATTTGTAACT+AGG | - | chr2_2:37826991-37827010 | None:intergenic | 30.0% | |
AGATACTATCGAACATTTCT+GGG | - | chr2_2:37827059-37827078 | None:intergenic | 30.0% | |
TAGATACTATCGAACATTTC+TGG | - | chr2_2:37827060-37827079 | None:intergenic | 30.0% | |
! | TAAGTGTGTAGAAGTTTTCA+AGG | + | chr2_2:37827138-37827157 | Msa0250020:CDS | 30.0% |
ACTTACTTGGATTTATTCCT+TGG | + | chr2_2:37827192-37827211 | Msa0250020:CDS | 30.0% | |
CTTACTTGGATTTATTCCTT+GGG | + | chr2_2:37827193-37827212 | Msa0250020:CDS | 30.0% | |
AAATTTCCCACTTATATTGC+AGG | - | chr2_2:37827221-37827240 | None:intergenic | 30.0% | |
GAAATTTGAACCAAAAACCA+TGG | + | chr2_2:37827234-37827253 | Msa0250020:CDS | 30.0% | |
TGGATTTATCTTTACTTACC+CGG | + | chr2_2:37827368-37827387 | Msa0250020:intron | 30.0% | |
AAAAAGCAAAACACAACATC+CGG | - | chr2_2:37827390-37827409 | None:intergenic | 30.0% | |
!! | ACTGAGTTATTCTGAGATAA+TGG | + | chr2_2:37827450-37827469 | Msa0250020:CDS | 30.0% |
CTTGTTAAGAATCTTGTACT+TGG | - | chr2_2:37827533-37827552 | None:intergenic | 30.0% | |
CAAGTACAAGATTCTTAACA+AGG | + | chr2_2:37827531-37827550 | Msa0250020:CDS | 30.0% | |
AATTTACAGACAAAATGAGG+AGG | + | chr2_2:37827605-37827624 | Msa0250020:CDS | 30.0% | |
!!! | CGTAATTATTTTAGTCTCTG+TGG | + | chr2_2:37827678-37827697 | Msa0250020:intron | 30.0% |
AAATTACCAACAGTTAGTGA+TGG | + | chr2_2:37827858-37827877 | Msa0250020:CDS | 30.0% | |
CGACAAAACAATGTCATAAA+AGG | - | chr2_2:37827930-37827949 | None:intergenic | 30.0% | |
CATTATCCATATCACAATTC+AGG | - | chr2_2:37827971-37827990 | None:intergenic | 30.0% | |
! | TGCAAATTTGTTCAAGTACT+TGG | + | chr2_2:37828076-37828095 | Msa0250020:CDS | 30.0% |
! | TTTTCTCCATATCCAAGTAT+CGG | + | chr2_2:37828237-37828256 | Msa0250020:three_prime_UTR | 30.0% |
TATAATTAAGTAGGCCTAGA+TGG | + | chr2_2:37828308-37828327 | Msa0250020:three_prime_UTR | 30.0% | |
CAGGCAATAAAAAACCAAAA+AGG | - | chr2_2:37828340-37828359 | None:intergenic | 30.0% | |
CAATTCCTATTTCCAATATG+GGG | - | chr2_2:37828414-37828433 | None:intergenic | 30.0% | |
GCAATTCCTATTTCCAATAT+GGG | - | chr2_2:37828415-37828434 | None:intergenic | 30.0% | |
! | TTGCGTTACTTTAGTTTAAG+TGG | + | chr2_2:37828431-37828450 | Msa0250020:three_prime_UTR | 30.0% |
AGAAACCCTGATAAAGGTTT+CGG | - | chr2_2:37819579-37819598 | None:intergenic | 35.0% | |
AGTAAGAGAAACCCTGATAA+AGG | - | chr2_2:37819585-37819604 | None:intergenic | 35.0% | |
CACGATTCTTTACCGAAAAA+GGG | + | chr2_2:37819616-37819635 | Msa0250020:five_prime_UTR | 35.0% | |
! | GAGATAAACGTACCCTTTTT+CGG | - | chr2_2:37819631-37819650 | None:intergenic | 35.0% |
TTATTGCGATTTCATTCGGT+AGG | + | chr2_2:37819748-37819767 | Msa0250020:intron | 35.0% | |
CAATTTCATTCAGTTGGAGT+TGG | + | chr2_2:37819890-37819909 | Msa0250020:intron | 35.0% | |
ATTTAGGAACAATTAGGGGT+TGG | + | chr2_2:37820012-37820031 | Msa0250020:intron | 35.0% | |
TTTAGGAACAATTAGGGGTT+GGG | + | chr2_2:37820013-37820032 | Msa0250020:intron | 35.0% | |
ACAGAAGCTGAAGAATATTC+TGG | + | chr2_2:37820303-37820322 | Msa0250020:CDS | 35.0% | |
AAGCTGAAGAATATTCTGGA+AGG | + | chr2_2:37820307-37820326 | Msa0250020:CDS | 35.0% | |
! | AGCTGAAGAATATTCTGGAA+GGG | + | chr2_2:37820308-37820327 | Msa0250020:CDS | 35.0% |
TGTAGTCATTTGATCCGTAA+TGG | + | chr2_2:37820648-37820667 | Msa0250020:intron | 35.0% | |
TTGATCAAAGGACACCATTA+CGG | - | chr2_2:37820665-37820684 | None:intergenic | 35.0% | |
! | GCTTGATTGTTGTTGTTGTT+TGG | + | chr2_2:37820713-37820732 | Msa0250020:intron | 35.0% |
ATATCATGTCATAGGTCACA+AGG | - | chr2_2:37820918-37820937 | None:intergenic | 35.0% | |
CGTCATTGATATCATGTCAT+AGG | - | chr2_2:37820926-37820945 | None:intergenic | 35.0% | |
GAGGACTACTTATAAGAACT+AGG | - | chr2_2:37821019-37821038 | None:intergenic | 35.0% | |
CTATAATTATCTAGTCCACG+TGG | - | chr2_2:37821072-37821091 | None:intergenic | 35.0% | |
! | ATGTTATGTGGTTAGTTGTG+TGG | - | chr2_2:37821137-37821156 | None:intergenic | 35.0% |
ACACAACTAACCACATAACA+TGG | + | chr2_2:37821136-37821155 | Msa0250020:intron | 35.0% | |
AAATGTCTGACCATGTTATG+TGG | - | chr2_2:37821149-37821168 | None:intergenic | 35.0% | |
TGGTTGTTTGTTCTTGTCTA+TGG | - | chr2_2:37821225-37821244 | None:intergenic | 35.0% | |
ACCATACACCATGTAACATT+TGG | + | chr2_2:37821241-37821260 | Msa0250020:intron | 35.0% | |
CCATACACCATGTAACATTT+GGG | + | chr2_2:37821242-37821261 | Msa0250020:intron | 35.0% | |
CATACACCATGTAACATTTG+GGG | + | chr2_2:37821243-37821262 | Msa0250020:intron | 35.0% | |
! | CTTTTTCCCCAAATGTTACA+TGG | - | chr2_2:37821252-37821271 | None:intergenic | 35.0% |
!! | GAAAGTAGTTGGTAGCAAAA+AGG | - | chr2_2:37821315-37821334 | None:intergenic | 35.0% |
AACACCCACTAAATACCTTT+GGG | + | chr2_2:37821389-37821408 | Msa0250020:intron | 35.0% | |
!! | CAATCCCAAAGGTATTTAGT+GGG | - | chr2_2:37821396-37821415 | None:intergenic | 35.0% |
TAGCTGCCATTAACAATATC+TGG | + | chr2_2:37821582-37821601 | Msa0250020:intron | 35.0% | |
ACCTCACCAGATATTGTTAA+TGG | - | chr2_2:37821591-37821610 | None:intergenic | 35.0% | |
AAATTATTGGGATCGTGAGT+TGG | + | chr2_2:37821644-37821663 | Msa0250020:intron | 35.0% | |
! | CACGGGATTATTTCTTAATC+TGG | + | chr2_2:37821671-37821690 | Msa0250020:intron | 35.0% |
AACAGAGAAACTAAGGGAAA+GGG | - | chr2_2:37821890-37821909 | None:intergenic | 35.0% | |
AAACAGAGAAACTAAGGGAA+AGG | - | chr2_2:37821891-37821910 | None:intergenic | 35.0% | |
GCAAGAAACAGAGAAACTAA+GGG | - | chr2_2:37821896-37821915 | None:intergenic | 35.0% | |
TGCAAGAAACAGAGAAACTA+AGG | - | chr2_2:37821897-37821916 | None:intergenic | 35.0% | |
GGATGAAGTAACTAAAACAG+AGG | - | chr2_2:37821927-37821946 | None:intergenic | 35.0% | |
TCATGAAGAACATGAAACAG+AGG | - | chr2_2:37822018-37822037 | None:intergenic | 35.0% | |
ATAGTAACTACGAATCTCTG+TGG | + | chr2_2:37822316-37822335 | Msa0250020:intron | 35.0% | |
TAGTAACTACGAATCTCTGT+GGG | + | chr2_2:37822317-37822336 | Msa0250020:intron | 35.0% | |
! | GATTTAAGACAGAATTGGGA+AGG | - | chr2_2:37822364-37822383 | None:intergenic | 35.0% |
!! | TGAGACTGATTTGAATTTGC+TGG | + | chr2_2:37822483-37822502 | Msa0250020:intron | 35.0% |
!! | CTGATTTGAATTTGCTGGAA+AGG | + | chr2_2:37822488-37822507 | Msa0250020:intron | 35.0% |
!! | TTTGAATTTGCTGGAAAGGA+TGG | + | chr2_2:37822492-37822511 | Msa0250020:intron | 35.0% |
!! | GTCAAGCAGATTTTGCTTTT+AGG | - | chr2_2:37822643-37822662 | None:intergenic | 35.0% |
TCATGTGGCTCATTTAATTG+AGG | + | chr2_2:37822754-37822773 | Msa0250020:intron | 35.0% | |
! | CATTTAATTGAGGTGTCATG+TGG | + | chr2_2:37822764-37822783 | Msa0250020:intron | 35.0% |
!!! | AAATTCACTTTTTGGGCTTC+AGG | + | chr2_2:37822895-37822914 | Msa0250020:intron | 35.0% |
! | GCCATCTAACCATGATTTTA+TGG | - | chr2_2:37822988-37823007 | None:intergenic | 35.0% |
TGGATCGATACTTTATTGCT+CGG | + | chr2_2:37823029-37823048 | Msa0250020:CDS | 35.0% | |
CATTTACTTCCTTGTAAACC+TGG | - | chr2_2:37823208-37823227 | None:intergenic | 35.0% | |
CAGGTTTACAAGGAAGTAAA+TGG | + | chr2_2:37823206-37823225 | Msa0250020:intron | 35.0% | |
AAGATTGATCAAGAACGTGA+AGG | + | chr2_2:37823335-37823354 | Msa0250020:intron | 35.0% | |
TATTTGTGGAGATTGGAATG+GGG | + | chr2_2:37823399-37823418 | Msa0250020:CDS | 35.0% | |
AATCAGGACAAGAATCTTCT+AGG | - | chr2_2:37823511-37823530 | None:intergenic | 35.0% | |
TTGTCCTGATTATATGCTCA+AGG | + | chr2_2:37823520-37823539 | Msa0250020:CDS | 35.0% | |
!!! | ACAGTTTTAGACCAAATAGC+TGG | - | chr2_2:37823715-37823734 | None:intergenic | 35.0% |
TGCATTACTTAGAGATGACA+AGG | + | chr2_2:37823932-37823951 | Msa0250020:CDS | 35.0% | |
ACAGCTTCCTTTAAATGCTT+AGG | + | chr2_2:37824017-37824036 | Msa0250020:intron | 35.0% | |
!! | TTCTAAAATACCCAAAGGCT+TGG | + | chr2_2:37824071-37824090 | Msa0250020:CDS | 35.0% |
CACAACCTGCTTAAATATAC+TGG | - | chr2_2:37824106-37824125 | None:intergenic | 35.0% | |
ATTTCTCCTTTCATTCCTGA+TGG | + | chr2_2:37824186-37824205 | Msa0250020:intron | 35.0% | |
!! | TTGTCCTTATTTCTGGTTGA+GGG | + | chr2_2:37824325-37824344 | Msa0250020:intron | 35.0% |
TAACACAAATTTGAACAGGC+GGG | - | chr2_2:37824410-37824429 | None:intergenic | 35.0% | |
GTAACACAAATTTGAACAGG+CGG | - | chr2_2:37824411-37824430 | None:intergenic | 35.0% | |
GTAAATAAGTCAAACTCGTG+TGG | - | chr2_2:37824671-37824690 | None:intergenic | 35.0% | |
ATTGTATAAGACGAGATCTC+AGG | - | chr2_2:37824990-37825009 | None:intergenic | 35.0% | |
TATACAATCCCAGAAGTTAC+TGG | + | chr2_2:37825002-37825021 | Msa0250020:intron | 35.0% | |
TATAAACATAAACTGTGGGG+GGG | - | chr2_2:37825077-37825096 | None:intergenic | 35.0% | |
ACAAAATCAAACGGAAGAGT+GGG | - | chr2_2:37825172-37825191 | None:intergenic | 35.0% | |
CCAATCTCAGTTTCCATAAA+TGG | - | chr2_2:37825348-37825367 | None:intergenic | 35.0% | |
CCATTTATGGAAACTGAGAT+TGG | + | chr2_2:37825345-37825364 | Msa0250020:intron | 35.0% | |
TGTGGAATAGAGTATGATTC+TGG | - | chr2_2:37825446-37825465 | None:intergenic | 35.0% | |
GAATCATACTCTATTCCACA+AGG | + | chr2_2:37825446-37825465 | Msa0250020:CDS | 35.0% | |
!! | AACTAACGGGTTTATAAGCA+AGG | - | chr2_2:37825977-37825996 | None:intergenic | 35.0% |
GCGATGGTATATTGAGAAAA+TGG | + | chr2_2:37826183-37826202 | Msa0250020:intron | 35.0% | |
GTTCTGTTAATATAAGGTCC+AGG | + | chr2_2:37826373-37826392 | Msa0250020:intron | 35.0% | |
CAAAAGCTTCACTTCAATGA+TGG | - | chr2_2:37826530-37826549 | None:intergenic | 35.0% | |
! | TCATTGAAGTGAAGCTTTTG+TGG | + | chr2_2:37826530-37826549 | Msa0250020:intron | 35.0% |
AGTGAGTTCCATTAGGAAAA+CGG | - | chr2_2:37826582-37826601 | None:intergenic | 35.0% | |
AAATTGAAGCAACAATGTGG+TGG | + | chr2_2:37826717-37826736 | Msa0250020:CDS | 35.0% | |
TACTTCAAAGATGGAAGGAA+TGG | + | chr2_2:37826746-37826765 | Msa0250020:CDS | 35.0% | |
AATAATCCTAATGTAGACCC+CGG | + | chr2_2:37826925-37826944 | Msa0250020:CDS | 35.0% | |
AGTAACTGTCAAGTCAATTC+CGG | - | chr2_2:37826947-37826966 | None:intergenic | 35.0% | |
CTAAGCACAGAAAACTTACT+TGG | + | chr2_2:37827179-37827198 | Msa0250020:CDS | 35.0% | |
! | ACAATCAGTTCCATGGTTTT+TGG | - | chr2_2:37827247-37827266 | None:intergenic | 35.0% |
AAAAGCAAAACACAACATCC+GGG | - | chr2_2:37827389-37827408 | None:intergenic | 35.0% | |
AGAATAACTCAGTCTATCTG+AGG | - | chr2_2:37827443-37827462 | None:intergenic | 35.0% | |
TATGAGTCAGTCTAACTCAA+GGG | - | chr2_2:37827712-37827731 | None:intergenic | 35.0% | |
TTATGAGTCAGTCTAACTCA+AGG | - | chr2_2:37827713-37827732 | None:intergenic | 35.0% | |
!!! | ACTTTTTTCTTCTCATCCAC+AGG | - | chr2_2:37827760-37827779 | None:intergenic | 35.0% |
AGTTATTGAGGATGTTGACA+AGG | + | chr2_2:37827777-37827796 | Msa0250020:CDS | 35.0% | |
CTTCATAATACGCACAATTG+AGG | - | chr2_2:37827824-37827843 | None:intergenic | 35.0% | |
TTGTGCGTATTATGAAGAGT+CGG | + | chr2_2:37827827-37827846 | Msa0250020:CDS | 35.0% | |
TTCTTAATTGCCTTGACATC+AGG | - | chr2_2:37828005-37828024 | None:intergenic | 35.0% | |
ATGTCAAGGCAATTAAGAAG+CGG | + | chr2_2:37828006-37828025 | Msa0250020:CDS | 35.0% | |
CATTATCTTTGTCTCTTTCC+AGG | - | chr2_2:37828058-37828077 | None:intergenic | 35.0% | |
ATAGCAAAACAAGATGAGGA+TGG | + | chr2_2:37828144-37828163 | Msa0250020:three_prime_UTR | 35.0% | |
GTTACTCTCAATTTCCTTGA+AGG | + | chr2_2:37828189-37828208 | Msa0250020:three_prime_UTR | 35.0% | |
ATTTATAGCTCCTTCCTTCA+AGG | - | chr2_2:37828206-37828225 | None:intergenic | 35.0% | |
CTGTAAATGTTTGCTCATGT+TGG | + | chr2_2:37828267-37828286 | Msa0250020:three_prime_UTR | 35.0% | |
ATGTTTGCTCATGTTGGAAA+AGG | + | chr2_2:37828273-37828292 | Msa0250020:three_prime_UTR | 35.0% | |
!! | CAAAAAGGAAAGTACCATCT+AGG | - | chr2_2:37828325-37828344 | None:intergenic | 35.0% |
! | CTAGATGGTACTTTCCTTTT+TGG | + | chr2_2:37828323-37828342 | Msa0250020:three_prime_UTR | 35.0% |
CGCAATTCCTATTTCCAATA+TGG | - | chr2_2:37828416-37828435 | None:intergenic | 35.0% | |
AACCATAAAATGAGTGGGTA+TGG | + | chr2_2:37828480-37828499 | Msa0250020:three_prime_UTR | 35.0% | |
CTTCACCGAAACCTTTATCA+GGG | + | chr2_2:37819571-37819590 | Msa0250020:five_prime_UTR | 40.0% | |
GCACGATTCTTTACCGAAAA+AGG | + | chr2_2:37819615-37819634 | Msa0250020:five_prime_UTR | 40.0% | |
!! | GATTTAGTTTGGGGGGATTA+GGG | + | chr2_2:37819850-37819869 | Msa0250020:intron | 40.0% |
TTAGGAACAATTAGGGGTTG+GGG | + | chr2_2:37820014-37820033 | Msa0250020:intron | 40.0% | |
GGAAATTTGGTTGCAGAGTT+TGG | + | chr2_2:37820200-37820219 | Msa0250020:intron | 40.0% | |
!! | AGAGTTTGGTGTTAAGGCTA+GGG | + | chr2_2:37820214-37820233 | Msa0250020:intron | 40.0% |
AGGGATTATCGATGAGTGAA+CGG | + | chr2_2:37820233-37820252 | Msa0250020:exon | 40.0% | |
! | AGGATGGGATTTTATGCTGA+AGG | + | chr2_2:37820276-37820295 | Msa0250020:CDS | 40.0% |
! | GGATGGGATTTTATGCTGAA+GGG | + | chr2_2:37820277-37820296 | Msa0250020:CDS | 40.0% |
GTACTTATCATACAGCGGTT+GGG | - | chr2_2:37820516-37820535 | None:intergenic | 40.0% | |
TGTACTTATCATACAGCGGT+TGG | - | chr2_2:37820517-37820536 | None:intergenic | 40.0% | |
AACCGCTGTATGATAAGTAC+AGG | + | chr2_2:37820516-37820535 | Msa0250020:CDS | 40.0% | |
ACCGCTGTATGATAAGTACA+GGG | + | chr2_2:37820517-37820536 | Msa0250020:CDS | 40.0% | |
TCCCTGTACTTATCATACAG+CGG | - | chr2_2:37820521-37820540 | None:intergenic | 40.0% | |
!! | CATTATAGGGCTATTGGCTT+AGG | + | chr2_2:37820846-37820865 | Msa0250020:intron | 40.0% |
TAATTATCTAGTCCACGTGG+AGG | - | chr2_2:37821069-37821088 | None:intergenic | 40.0% | |
CCCAAATGTTACATGGTGTA+TGG | - | chr2_2:37821245-37821264 | None:intergenic | 40.0% | |
CTCAGATCTTGTCTATGGTT+TGG | - | chr2_2:37821287-37821306 | None:intergenic | 40.0% | |
GTACACTCAGATCTTGTCTA+TGG | - | chr2_2:37821292-37821311 | None:intergenic | 40.0% | |
GGACTGATTGAGAAAGTAGT+TGG | - | chr2_2:37821326-37821345 | None:intergenic | 40.0% | |
!! | CAAAGGTATTTAGTGGGTGT+TGG | - | chr2_2:37821390-37821409 | None:intergenic | 40.0% |
CAACACCCACTAAATACCTT+TGG | + | chr2_2:37821388-37821407 | Msa0250020:intron | 40.0% | |
!! | CCAATCCCAAAGGTATTTAG+TGG | - | chr2_2:37821397-37821416 | None:intergenic | 40.0% |
!! | CCACTAAATACCTTTGGGAT+TGG | + | chr2_2:37821394-37821413 | Msa0250020:intron | 40.0% |
!! | GAGATCAGTTTTGTCAATCG+CGG | + | chr2_2:37821424-37821443 | Msa0250020:intron | 40.0% |
TTGTCAAATAGCCGCTATAG+TGG | - | chr2_2:37821503-37821522 | None:intergenic | 40.0% | |
GACAAACCACTATTGTTCCA+CGG | - | chr2_2:37821547-37821566 | None:intergenic | 40.0% | |
GCCATTAACAATATCTGGTG+AGG | + | chr2_2:37821587-37821606 | Msa0250020:intron | 40.0% | |
AAAAAAAAATACCGGGCGTG+TGG | + | chr2_2:37821619-37821638 | Msa0250020:intron | 40.0% | |
! | CAATAATTTTTCCACACGCC+CGG | - | chr2_2:37821633-37821652 | None:intergenic | 40.0% |
GGGCGTGTGGAAAAATTATT+GGG | + | chr2_2:37821632-37821651 | Msa0250020:intron | 40.0% | |
ACAGAGAAACTAAGGGAAAG+GGG | - | chr2_2:37821889-37821908 | None:intergenic | 40.0% | |
GGAATCAAAATGATCAGCCA+AGG | + | chr2_2:37822280-37822299 | Msa0250020:intron | 40.0% | |
CTATAGAGTAAAGACAGCCT+TGG | - | chr2_2:37822300-37822319 | None:intergenic | 40.0% | |
!! | GATTTATTTTTCTTGGGGGG+TGG | + | chr2_2:37822717-37822736 | Msa0250020:intron | 40.0% |
TTATGTTGCGAGAACTTGTG+AGG | + | chr2_2:37822951-37822970 | Msa0250020:CDS | 40.0% | |
! | GTGGGCTAACCATAAAATCA+TGG | + | chr2_2:37822976-37822995 | Msa0250020:CDS | 40.0% |
ATCGATACTTTATTGCTCGG+AGG | + | chr2_2:37823032-37823051 | Msa0250020:CDS | 40.0% | |
TTCCTCCGCTTAATGAAGTT+GGG | + | chr2_2:37823059-37823078 | Msa0250020:CDS | 40.0% | |
ATTCTCGAAAGGCTTCAAAC+TGG | + | chr2_2:37823483-37823502 | Msa0250020:CDS | 40.0% | |
! | CTCAAGGTATTATTCCTTCG+TGG | + | chr2_2:37823536-37823555 | Msa0250020:intron | 40.0% |
TGGAAATGAAGAAACCACGA+AGG | - | chr2_2:37823553-37823572 | None:intergenic | 40.0% | |
ATTGTGGCATTCATTACAGG+CGG | + | chr2_2:37823596-37823615 | Msa0250020:intron | 40.0% | |
CTTGAAACGGGAGAAAGATA+GGG | + | chr2_2:37823626-37823645 | Msa0250020:CDS | 40.0% | |
!! | CTTAGGTTGAAGACTTGTCA+AGG | + | chr2_2:37824034-37824053 | Msa0250020:intron | 40.0% |
GACAAACCATCAGGAATGAA+AGG | - | chr2_2:37824195-37824214 | None:intergenic | 40.0% | |
CATCACATAGACAAACCATC+AGG | - | chr2_2:37824204-37824223 | None:intergenic | 40.0% | |
TTCGGTAACATGCTGCATAT+AGG | - | chr2_2:37824235-37824254 | None:intergenic | 40.0% | |
AGATGCAGCAAGTAACAAGA+AGG | + | chr2_2:37824284-37824303 | Msa0250020:CDS | 40.0% | |
!! | GTTGTCCTTATTTCTGGTTG+AGG | + | chr2_2:37824324-37824343 | Msa0250020:intron | 40.0% |
!! | TGTCCTTATTTCTGGTTGAG+GGG | + | chr2_2:37824326-37824345 | Msa0250020:intron | 40.0% |
TAACCCCTCAACCAGAAATA+AGG | - | chr2_2:37824332-37824351 | None:intergenic | 40.0% | |
TAACGTGCTACATGACATGA+TGG | + | chr2_2:37824730-37824749 | Msa0250020:intron | 40.0% | |
!! | GACATGATGGACAAACAATC+TGG | + | chr2_2:37824743-37824762 | Msa0250020:intron | 40.0% |
GTCTTTGTCCAGTAACTTCT+GGG | - | chr2_2:37825013-37825032 | None:intergenic | 40.0% | |
TGTCTTTGTCCAGTAACTTC+TGG | - | chr2_2:37825014-37825033 | None:intergenic | 40.0% | |
!! | TTGACTTTTTGAGCCAACGA+TGG | + | chr2_2:37825038-37825057 | Msa0250020:intron | 40.0% |
GATAACTACTAGTCCATCGT+TGG | - | chr2_2:37825054-37825073 | None:intergenic | 40.0% | |
ATAAACATAAACTGTGGGGG+GGG | - | chr2_2:37825076-37825095 | None:intergenic | 40.0% | |
CACAAAATCAAACGGAAGAG+TGG | - | chr2_2:37825173-37825192 | None:intergenic | 40.0% | |
! | CCAACAATATCCCTTTTCTC+CGG | - | chr2_2:37825262-37825281 | None:intergenic | 40.0% |
CGGAGAAAAGGGATATTGTT+GGG | + | chr2_2:37825260-37825279 | Msa0250020:CDS | 40.0% | |
TATTGTTGGGTTACAAGAGC+AGG | + | chr2_2:37825273-37825292 | Msa0250020:CDS | 40.0% | |
!! | TGAGATTGGTCTCTTTCTTC+AGG | + | chr2_2:37825359-37825378 | Msa0250020:intron | 40.0% |
TATCCTATAGGCTCTTAAGG+AGG | + | chr2_2:37825530-37825549 | Msa0250020:intron | 40.0% | |
ACAAAATGTGGCAAGCAGTT+CGG | - | chr2_2:37825601-37825620 | None:intergenic | 40.0% | |
TAGAATGTGTCAGACCCAAT+TGG | + | chr2_2:37825866-37825885 | Msa0250020:intron | 40.0% | |
GACTTTAGTGGTCTAAGCTT+GGG | + | chr2_2:37825907-37825926 | Msa0250020:intron | 40.0% | |
ACTTTAGTGGTCTAAGCTTG+GGG | + | chr2_2:37825908-37825927 | Msa0250020:intron | 40.0% | |
!! | TAACGGGTTTATAAGCAAGG+TGG | - | chr2_2:37825974-37825993 | None:intergenic | 40.0% |
TGAAAAAAAGATCTTGGGGG+AGG | - | chr2_2:37826037-37826056 | None:intergenic | 40.0% | |
! | TTTTCTTCCACGCATGTTAC+TGG | + | chr2_2:37826089-37826108 | Msa0250020:intron | 40.0% |
CCAAAAAGGACAAAGCCAAA+GGG | - | chr2_2:37826409-37826428 | None:intergenic | 40.0% | |
!!! | CCTTTGGCTTTGTCCTTTTT+GGG | + | chr2_2:37826407-37826426 | Msa0250020:intron | 40.0% |
!!! | GCTTTGTCCTTTTTGGGTTT+CGG | + | chr2_2:37826413-37826432 | Msa0250020:intron | 40.0% |
GGCACAGTCAATGATACATT+TGG | + | chr2_2:37826501-37826520 | Msa0250020:intron | 40.0% | |
! | AGTTAACCCCGTTTTCCTAA+TGG | + | chr2_2:37826571-37826590 | Msa0250020:intron | 40.0% |
TGAGTTCCATTAGGAAAACG+GGG | - | chr2_2:37826580-37826599 | None:intergenic | 40.0% | |
GTGAGTTCCATTAGGAAAAC+GGG | - | chr2_2:37826581-37826600 | None:intergenic | 40.0% | |
! | AGGAATGGTCAGTCTTTTCA+AGG | + | chr2_2:37826761-37826780 | Msa0250020:intron | 40.0% |
!! | GTCTTTTCAAGGCTTTGTGA+TGG | + | chr2_2:37826772-37826791 | Msa0250020:intron | 40.0% |
TCAGGTTACAGATTTGACAC+TGG | + | chr2_2:37826864-37826883 | Msa0250020:intron | 40.0% | |
TACAGATTTGACACTGGCAA+AGG | + | chr2_2:37826870-37826889 | Msa0250020:CDS | 40.0% | |
TAACTGTCAAGTCAATTCCG+GGG | - | chr2_2:37826945-37826964 | None:intergenic | 40.0% | |
GTAACTGTCAAGTCAATTCC+GGG | - | chr2_2:37826946-37826965 | None:intergenic | 40.0% | |
ACTTATATTGCAGGTACCCA+AGG | - | chr2_2:37827212-37827231 | None:intergenic | 40.0% | |
TTGGGTACCTGCAATATAAG+TGG | + | chr2_2:37827211-37827230 | Msa0250020:CDS | 40.0% | |
TGGGTACCTGCAATATAAGT+GGG | + | chr2_2:37827212-37827231 | Msa0250020:CDS | 40.0% | |
AGTAGTCACAATCAGTTCCA+TGG | - | chr2_2:37827254-37827273 | None:intergenic | 40.0% | |
ACTGATTGTGACTACTTACC+AGG | + | chr2_2:37827258-37827277 | Msa0250020:CDS | 40.0% | |
CTTGTACTTGGCACATGATA+AGG | - | chr2_2:37827521-37827540 | None:intergenic | 40.0% | |
GGTAATATTGCTTTCGTGCT+TGG | - | chr2_2:37827559-37827578 | None:intergenic | 40.0% | |
AGACAAAATGAGGAGGATCA+AGG | + | chr2_2:37827612-37827631 | Msa0250020:CDS | 40.0% | |
! | TTTTTCTTCTCATCCACAGG+AGG | - | chr2_2:37827757-37827776 | None:intergenic | 40.0% |
GCAGATAGCAAAACAAGATG+AGG | + | chr2_2:37828140-37828159 | Msa0250020:three_prime_UTR | 40.0% | |
CTCTCAATTTCCTTGAAGGA+AGG | + | chr2_2:37828193-37828212 | Msa0250020:three_prime_UTR | 40.0% | |
AAGTCATCAGATGTGAATGC+AGG | - | chr2_2:37828359-37828378 | None:intergenic | 40.0% | |
GGGGTGGGAGAAATAATTAA+TGG | - | chr2_2:37828395-37828414 | None:intergenic | 40.0% | |
! | TTATTTCTCCCACCCCATAT+TGG | + | chr2_2:37828399-37828418 | Msa0250020:three_prime_UTR | 40.0% |
TCCTATTTCCAATATGGGGT+GGG | - | chr2_2:37828410-37828429 | None:intergenic | 40.0% | |
TTCCTATTTCCAATATGGGG+TGG | - | chr2_2:37828411-37828430 | None:intergenic | 40.0% | |
! | TGCCATACCCACTCATTTTA+TGG | - | chr2_2:37828485-37828504 | None:intergenic | 40.0% |
GAATCGAAACCTCACTTCTA+TGG | + | chr2_2:37828508-37828527 | Msa0250020:three_prime_UTR | 40.0% | |
CCTGATAAAGGTTTCGGTGA+AGG | - | chr2_2:37819573-37819592 | None:intergenic | 45.0% | |
CCTTCACCGAAACCTTTATC+AGG | + | chr2_2:37819570-37819589 | Msa0250020:five_prime_UTR | 45.0% | |
TAAAGAATCGTGCGCGATGA+TGG | - | chr2_2:37819608-37819627 | None:intergenic | 45.0% | |
!! | TAGGGTTTAGTTTGGGGACT+AGG | + | chr2_2:37819713-37819732 | Msa0250020:intron | 45.0% |
!! | AGGGTTTAGTTTGGGGACTA+GGG | + | chr2_2:37819714-37819733 | Msa0250020:intron | 45.0% |
!! | GGATTTAGTTTGGGGGGATT+AGG | + | chr2_2:37819849-37819868 | Msa0250020:intron | 45.0% |
TAGGAACAATTAGGGGTTGG+GGG | + | chr2_2:37820015-37820034 | Msa0250020:intron | 45.0% | |
!! | GGTTGCAGAGTTTGGTGTTA+AGG | + | chr2_2:37820208-37820227 | Msa0250020:intron | 45.0% |
!! | CAGAGTTTGGTGTTAAGGCT+AGG | + | chr2_2:37820213-37820232 | Msa0250020:intron | 45.0% |
!!! | TGGGTTTTGTTTGAGCTCTG+AGG | + | chr2_2:37820414-37820433 | Msa0250020:intron | 45.0% |
GGTTGGGAATAGTCATTTGG+AGG | - | chr2_2:37820500-37820519 | None:intergenic | 45.0% | |
AGCGGTTGGGAATAGTCATT+TGG | - | chr2_2:37820503-37820522 | None:intergenic | 45.0% | |
GCTGTATGATAAGTACAGGG+AGG | + | chr2_2:37820520-37820539 | Msa0250020:CDS | 45.0% | |
!! | TAAGTACAGGGAGGCATTTG+AGG | + | chr2_2:37820529-37820548 | Msa0250020:CDS | 45.0% |
! | AAGCCTTATCCCACTAAGTG+GGG | - | chr2_2:37820697-37820716 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | - | chr2_2:37820698-37820717 | None:intergenic | 45.0% |
! | TCAAGCCTTATCCCACTAAG+TGG | - | chr2_2:37820699-37820718 | None:intergenic | 45.0% |
CTATGGAAGACATGAGACAC+TGG | - | chr2_2:37821208-37821227 | None:intergenic | 45.0% | |
!! | AATACCTTTGGGATTGGACG+TGG | + | chr2_2:37821400-37821419 | Msa0250020:intron | 45.0% |
TCGCGGATAGCTGAAAATAG+TGG | + | chr2_2:37821441-37821460 | Msa0250020:intron | 45.0% | |
CGCGGATAGCTGAAAATAGT+GGG | + | chr2_2:37821442-37821461 | Msa0250020:intron | 45.0% | |
GTGCTATAGCACCACTATAG+CGG | + | chr2_2:37821489-37821508 | Msa0250020:intron | 45.0% | |
TTGTACTAAATAGCGTGCCG+TGG | + | chr2_2:37821527-37821546 | Msa0250020:intron | 45.0% | |
GCAGCTATAGTAGCCGAATT+TGG | - | chr2_2:37821569-37821588 | None:intergenic | 45.0% | |
CGGGCGTGTGGAAAAATTAT+TGG | + | chr2_2:37821631-37821650 | Msa0250020:intron | 45.0% | |
AAATTGAAGCAGCTTGGACC+AGG | + | chr2_2:37821733-37821752 | Msa0250020:intron | 45.0% | |
AGCTGAAAGATCGTAACTCG+AGG | - | chr2_2:37822209-37822228 | None:intergenic | 45.0% | |
TCGAGTTACGATCTTTCAGC+TGG | + | chr2_2:37822208-37822227 | Msa0250020:intron | 45.0% | |
! | AAGGAGAGTCGGAGTCTTTT+GGG | - | chr2_2:37822345-37822364 | None:intergenic | 45.0% |
ACAGAATTGGGAAGGAGAGT+CGG | - | chr2_2:37822356-37822375 | None:intergenic | 45.0% | |
!! | GACTGGTCTGTGTCTCTTAA+AGG | + | chr2_2:37822598-37822617 | Msa0250020:intron | 45.0% |
TCGTGCTTCTCTCTCAAAGA+AGG | - | chr2_2:37822926-37822945 | None:intergenic | 45.0% | |
CTTCCTCCGCTTAATGAAGT+TGG | + | chr2_2:37823058-37823077 | Msa0250020:CDS | 45.0% | |
GTCAGCCCAACTTCATTAAG+CGG | - | chr2_2:37823067-37823086 | None:intergenic | 45.0% | |
!! | GCTGACTTGCTTTCGTGATT+TGG | + | chr2_2:37823081-37823100 | Msa0250020:CDS | 45.0% |
!! | TGCAGAAGTGTCTTTGAGCA+TGG | - | chr2_2:37823459-37823478 | None:intergenic | 45.0% |
GCTTGAAACGGGAGAAAGAT+AGG | + | chr2_2:37823625-37823644 | Msa0250020:CDS | 45.0% | |
TAGCGAGCCCAAGTTATTAG+AGG | + | chr2_2:37823671-37823690 | Msa0250020:CDS | 45.0% | |
GAAACAGGATCCAAGCCTTT+GGG | - | chr2_2:37824084-37824103 | None:intergenic | 45.0% | |
ATGCAGCATGTTACCGAAGA+AGG | + | chr2_2:37824237-37824256 | Msa0250020:intron | 45.0% | |
! | TACCGAAGAAGGTACAACGT+TGG | + | chr2_2:37824248-37824267 | Msa0250020:CDS | 45.0% |
CACCAACGTTGTACCTTCTT+CGG | - | chr2_2:37824253-37824272 | None:intergenic | 45.0% | |
! | AGGTACAACGTTGGTGAAGT+TGG | + | chr2_2:37824257-37824276 | Msa0250020:CDS | 45.0% |
! | GGCTTCAATGCCGATTATTG+CGG | - | chr2_2:37824389-37824408 | None:intergenic | 45.0% |
TCAAACTCGTGTGGCTCAAA+TGG | - | chr2_2:37824662-37824681 | None:intergenic | 45.0% | |
GACTCGTTGTGCTCATCAAA+AGG | + | chr2_2:37824961-37824980 | Msa0250020:intron | 45.0% | |
AGGTCGTACACGTTCCTTAT+CGG | + | chr2_2:37825099-37825118 | Msa0250020:intron | 45.0% | |
CCGGAGAAAAGGGATATTGT+TGG | + | chr2_2:37825259-37825278 | Msa0250020:CDS | 45.0% | |
AACAGTCGTTCACATATGCC+AGG | - | chr2_2:37825422-37825441 | None:intergenic | 45.0% | |
AAGCCTCCTTAAGAGCCTAT+AGG | - | chr2_2:37825536-37825555 | None:intergenic | 45.0% | |
!!! | TTTTGCAACAAGGGTGTTGC+TGG | + | chr2_2:37825564-37825583 | Msa0250020:CDS | 45.0% |
AATGTGTCAGACCCAATTGG+AGG | + | chr2_2:37825869-37825888 | Msa0250020:intron | 45.0% | |
!! | GCGTGCATAATGGACTTTAG+TGG | + | chr2_2:37825895-37825914 | Msa0250020:intron | 45.0% |
GGACTTTAGTGGTCTAAGCT+TGG | + | chr2_2:37825906-37825925 | Msa0250020:intron | 45.0% | |
CTTTAGTGGTCTAAGCTTGG+GGG | + | chr2_2:37825909-37825928 | Msa0250020:intron | 45.0% | |
TTTAGTGGTCTAAGCTTGGG+GGG | + | chr2_2:37825910-37825929 | Msa0250020:intron | 45.0% | |
AAGGTGGAGTGAAGTCCAAA+TGG | - | chr2_2:37825958-37825977 | None:intergenic | 45.0% | |
! | CCAAAGGGATTTGGTATTCC+TGG | - | chr2_2:37826394-37826413 | None:intergenic | 45.0% |
CCAGGAATACCAAATCCCTT+TGG | + | chr2_2:37826391-37826410 | Msa0250020:intron | 45.0% | |
AGGACAAAGCCAAAGGGATT+TGG | - | chr2_2:37826403-37826422 | None:intergenic | 45.0% | |
!!! | CCCTTTGGCTTTGTCCTTTT+TGG | + | chr2_2:37826406-37826425 | Msa0250020:intron | 45.0% |
CCCAAAAAGGACAAAGCCAA+AGG | - | chr2_2:37826410-37826429 | None:intergenic | 45.0% | |
! | CTTGCAGGAAAAAGCTTGCT+CGG | + | chr2_2:37826640-37826659 | Msa0250020:intron | 45.0% |
ACTCCTCTCATGGTCATCAT+TGG | - | chr2_2:37826688-37826707 | None:intergenic | 45.0% | |
GGAGAACCAAACAAGCTTTG+AGG | + | chr2_2:37826891-37826910 | Msa0250020:CDS | 45.0% | |
TCAATTCCGGGGTCTACATT+AGG | - | chr2_2:37826934-37826953 | None:intergenic | 45.0% | |
ACAGTTACTGTTCTGACCAC+TGG | + | chr2_2:37826958-37826977 | Msa0250020:CDS | 45.0% | |
CCATTTCTGCAGGAAGATTG+AGG | - | chr2_2:37827011-37827030 | None:intergenic | 45.0% | |
CCTCAATCTTCCTGCAGAAA+TGG | + | chr2_2:37827008-37827027 | Msa0250020:CDS | 45.0% | |
GCGTATTATGAAGAGTCGGA+AGG | + | chr2_2:37827831-37827850 | Msa0250020:CDS | 45.0% | |
TCCCACCCCATATTGGAAAT+AGG | + | chr2_2:37828406-37828425 | Msa0250020:three_prime_UTR | 45.0% | |
!! | TAATAAGAAAAAAATAAAAA+AGG | - | chr2_2:37819489-37819508 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAAAAAAACAT+TGG | - | chr2_2:37823177-37823196 | None:intergenic | 5.0% |
AACAATTAGGGGTTGGGGGA+AGG | + | chr2_2:37820019-37820038 | Msa0250020:intron | 50.0% | |
TCAGAGCTGAACTGAGGTTC+AGG | - | chr2_2:37820337-37820356 | None:intergenic | 50.0% | |
TGAACCTCAGTTCAGCTCTG+AGG | + | chr2_2:37820336-37820355 | Msa0250020:CDS | 50.0% | |
TAGTCCTCAGAGCTGAACTG+AGG | - | chr2_2:37820343-37820362 | None:intergenic | 50.0% | |
GGGTCGGCTACATTGATCAA+AGG | - | chr2_2:37820677-37820696 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr2_2:37820693-37820712 | None:intergenic | 50.0% | |
TGGAACATTCAACCTCCACG+TGG | + | chr2_2:37821054-37821073 | Msa0250020:intron | 50.0% | |
! | TGTGGTTAGTTGTGTGGCTG+CGG | - | chr2_2:37821131-37821150 | None:intergenic | 50.0% |
GAAGACATGAGACACTGGTC+TGG | - | chr2_2:37821203-37821222 | None:intergenic | 50.0% | |
CACAACTCGCAACAGACAAG+TGG | - | chr2_2:37821347-37821366 | None:intergenic | 50.0% | |
!! | GGATCGTGAGTTGGTTTGCA+CGG | + | chr2_2:37821653-37821672 | Msa0250020:intron | 50.0% |
!! | GATCGTGAGTTGGTTTGCAC+GGG | + | chr2_2:37821654-37821673 | Msa0250020:intron | 50.0% |
GTAACTCGAGGATCATAGCG+TGG | - | chr2_2:37822197-37822216 | None:intergenic | 50.0% | |
! | GAAGGAGAGTCGGAGTCTTT+TGG | - | chr2_2:37822346-37822365 | None:intergenic | 50.0% |
! | ATTTTTCTTGGGGGGTGGAG+TGG | + | chr2_2:37822722-37822741 | Msa0250020:intron | 50.0% |
!! | GAGTGGTAAGAGGTGTCATG+TGG | + | chr2_2:37822739-37822758 | Msa0250020:intron | 50.0% |
TGTTGCGAGAACTTGTGAGG+AGG | + | chr2_2:37822954-37822973 | Msa0250020:CDS | 50.0% | |
AGCCCAACTTCATTAAGCGG+AGG | - | chr2_2:37823064-37823083 | None:intergenic | 50.0% | |
GGAGATTGGAATGGGGCATA+TGG | + | chr2_2:37823406-37823425 | Msa0250020:CDS | 50.0% | |
GGAAACAGGATCCAAGCCTT+TGG | - | chr2_2:37824085-37824104 | None:intergenic | 50.0% | |
AATGTCTGCAGCCGGAGAAA+AGG | + | chr2_2:37825248-37825267 | Msa0250020:intron | 50.0% | |
ATGTCTGCAGCCGGAGAAAA+GGG | + | chr2_2:37825249-37825268 | Msa0250020:intron | 50.0% | |
TGAGCTGCATGACAAGTACC+TGG | + | chr2_2:37825401-37825420 | Msa0250020:CDS | 50.0% | |
ATGCACGCACACCTCCAATT+GGG | - | chr2_2:37825883-37825902 | None:intergenic | 50.0% | |
TATGCACGCACACCTCCAAT+TGG | - | chr2_2:37825884-37825903 | None:intergenic | 50.0% | |
! | TTGGAGGTGTGCGTGCATAA+TGG | + | chr2_2:37825885-37825904 | Msa0250020:intron | 50.0% |
CGACTTTCCAGTAACATGCG+TGG | - | chr2_2:37826099-37826118 | None:intergenic | 50.0% | |
!! | GCTTTTTCCTGCAAGCAACC+AGG | - | chr2_2:37826635-37826654 | None:intergenic | 50.0% |
GTGCCAATGATGACCATGAG+AGG | + | chr2_2:37826682-37826701 | Msa0250020:CDS | 50.0% | |
!! | CTGTTCTGACCACTGGTTTC+TGG | + | chr2_2:37826965-37826984 | Msa0250020:CDS | 50.0% |
GTAACTAGGCCAGAAACCAG+TGG | - | chr2_2:37826977-37826996 | None:intergenic | 50.0% | |
TTCTCATCCACAGGAGGAAG+AGG | - | chr2_2:37827751-37827770 | None:intergenic | 50.0% | |
CGCACTCCATCACTAACTGT+TGG | - | chr2_2:37827867-37827886 | None:intergenic | 50.0% | |
ATGGAGTGCGTTGAGCAGTT+AGG | + | chr2_2:37827877-37827896 | Msa0250020:CDS | 50.0% | |
GCAGTTAGGCCGCATGTTTA+AGG | + | chr2_2:37827891-37827910 | Msa0250020:CDS | 50.0% | |
CTTGATCTCTCGAGACTACC+TGG | + | chr2_2:37828037-37828056 | Msa0250020:CDS | 50.0% | |
!! | CTCCATATCCAAGTATCGGC+TGG | + | chr2_2:37828241-37828260 | Msa0250020:three_prime_UTR | 50.0% |
AGCCAGCCGATACTTGGATA+TGG | - | chr2_2:37828246-37828265 | None:intergenic | 50.0% | |
TACAGTAGCCAGCCGATACT+TGG | - | chr2_2:37828252-37828271 | None:intergenic | 50.0% | |
AATTAGGGGTTGGGGGAAGG+AGG | + | chr2_2:37820022-37820041 | Msa0250020:intron | 55.0% | |
ATTAGGGGTTGGGGGAAGGA+GGG | + | chr2_2:37820023-37820042 | Msa0250020:intron | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr2_2:37820684-37820703 | Msa0250020:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr2_2:37820685-37820704 | Msa0250020:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr2_2:37820691-37820710 | Msa0250020:intron | 55.0% | |
CTCACCACGTCCAATCCCAA+AGG | - | chr2_2:37821407-37821426 | None:intergenic | 55.0% | |
AGCGTGCCGTGGAACAATAG+TGG | + | chr2_2:37821538-37821557 | Msa0250020:intron | 55.0% | |
TGCGAGAACTTGTGAGGAGG+TGG | + | chr2_2:37822957-37822976 | Msa0250020:CDS | 55.0% | |
GCGAGAACTTGTGAGGAGGT+GGG | + | chr2_2:37822958-37822977 | Msa0250020:CDS | 55.0% | |
GTGGCATTCATTACAGGCGG+AGG | + | chr2_2:37823599-37823618 | Msa0250020:intron | 55.0% | |
!! | AGGCGGAGGAGTGCTTGAAA+CGG | + | chr2_2:37823613-37823632 | Msa0250020:intron | 55.0% |
GTCTAAGCTTGGGGGGTTCA+TGG | + | chr2_2:37825917-37825936 | Msa0250020:intron | 55.0% | |
CATCTTGCCTGGTTGCTTGC+AGG | + | chr2_2:37826625-37826644 | Msa0250020:intron | 55.0% | |
! | GCAGGAAAAAGCTTGCTCGG+AGG | + | chr2_2:37826643-37826662 | Msa0250020:intron | 55.0% |
GCAGATTCCTCTTCCTCCTG+TGG | + | chr2_2:37827741-37827760 | Msa0250020:intron | 55.0% | |
GTTTGCGCAGCCTGATGTCA+AGG | + | chr2_2:37827992-37828011 | Msa0250020:intron | 55.0% | |
CGCAACGCACCATAGAAGTG+AGG | - | chr2_2:37828520-37828539 | None:intergenic | 55.0% | |
TTGGGGGGTGGAGTGGTAAG+AGG | + | chr2_2:37822729-37822748 | Msa0250020:intron | 60.0% | |
!! | GGCGGAGGAGTGCTTGAAAC+GGG | + | chr2_2:37823614-37823633 | Msa0250020:intron | 60.0% |
TGGGCTCGCTACTAGAGTGC+AGG | - | chr2_2:37823662-37823681 | None:intergenic | 60.0% | |
TCGCAGTTGCTGCCGGAGGA+GGG | - | chr2_2:37821862-37821881 | None:intergenic | 65.0% | |
!! | TCGCAGTCGCGCTGGCTGAG+AGG | - | chr2_2:37821825-37821844 | None:intergenic | 70.0% |
CCACCTCTCACGCCCTCCTC+CGG | + | chr2_2:37821847-37821866 | Msa0250020:intron | 70.0% | |
GTCGCAGTTGCTGCCGGAGG+AGG | - | chr2_2:37821863-37821882 | None:intergenic | 70.0% | |
AGCGTCGCAGTTGCTGCCGG+AGG | - | chr2_2:37821866-37821885 | None:intergenic | 70.0% | |
!! | GGGAGCGTCGCAGTTGCTGC+CGG | - | chr2_2:37821869-37821888 | None:intergenic | 70.0% |
AGGTGGCGTCGCAGTCGCGC+TGG | - | chr2_2:37821833-37821852 | None:intergenic | 75.0% | |
! | CCGGAGGAGGGCGTGAGAGG+TGG | - | chr2_2:37821850-37821869 | None:intergenic | 75.0% |
! | CTGCCGGAGGAGGGCGTGAG+AGG | - | chr2_2:37821853-37821872 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 37819445 | 37828587 | 37819445 | ID=Msa0250020;Name=Msa0250020 |
chr2_2 | mRNA | 37819445 | 37828587 | 37819445 | ID=Msa0250020-mRNA-1;Parent=Msa0250020;Name=Msa0250020-mRNA-1;_AED=0.11;_eAED=0.11;_QI=221|1|1|1|0.94|0.9|20|484|742 |
chr2_2 | exon | 37819445 | 37819637 | 37819445 | ID=Msa0250020-mRNA-1:exon:11918;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37820216 | 37820377 | 37820216 | ID=Msa0250020-mRNA-1:exon:11919;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37820469 | 37820568 | 37820469 | ID=Msa0250020-mRNA-1:exon:11920;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37822917 | 37823102 | 37822917 | ID=Msa0250020-mRNA-1:exon:11921;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37823209 | 37823256 | 37823209 | ID=Msa0250020-mRNA-1:exon:11922;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37823338 | 37823541 | 37823338 | ID=Msa0250020-mRNA-1:exon:11923;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37823615 | 37823692 | 37823615 | ID=Msa0250020-mRNA-1:exon:11924;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37823864 | 37823953 | 37823864 | ID=Msa0250020-mRNA-1:exon:11925;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37824039 | 37824119 | 37824039 | ID=Msa0250020-mRNA-1:exon:11926;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37824243 | 37824305 | 37824243 | ID=Msa0250020-mRNA-1:exon:11927;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37825259 | 37825294 | 37825259 | ID=Msa0250020-mRNA-1:exon:11928;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37825381 | 37825467 | 37825381 | ID=Msa0250020-mRNA-1:exon:11929;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37825540 | 37825689 | 37825540 | ID=Msa0250020-mRNA-1:exon:11930;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37825778 | 37825833 | 37825778 | ID=Msa0250020-mRNA-1:exon:11931;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37826647 | 37826767 | 37826647 | ID=Msa0250020-mRNA-1:exon:11932;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37826868 | 37827029 | 37826868 | ID=Msa0250020-mRNA-1:exon:11933;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37827136 | 37827279 | 37827136 | ID=Msa0250020-mRNA-1:exon:11934;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37827415 | 37827633 | 37827415 | ID=Msa0250020-mRNA-1:exon:11935;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37827745 | 37827912 | 37827745 | ID=Msa0250020-mRNA-1:exon:11936;Parent=Msa0250020-mRNA-1 |
chr2_2 | exon | 37828002 | 37828587 | 37828002 | ID=Msa0250020-mRNA-1:exon:11937;Parent=Msa0250020-mRNA-1 |
chr2_2 | five_prime_UTR | 37819445 | 37819637 | 37819445 | ID=Msa0250020-mRNA-1:five_prime_utr;Parent=Msa0250020-mRNA-1 |
chr2_2 | five_prime_UTR | 37820216 | 37820243 | 37820216 | ID=Msa0250020-mRNA-1:five_prime_utr;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37820244 | 37820377 | 37820244 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37820469 | 37820568 | 37820469 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37822917 | 37823102 | 37822917 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37823209 | 37823256 | 37823209 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37823338 | 37823541 | 37823338 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37823615 | 37823692 | 37823615 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37823864 | 37823953 | 37823864 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37824039 | 37824119 | 37824039 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37824243 | 37824305 | 37824243 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37825259 | 37825294 | 37825259 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37825381 | 37825467 | 37825381 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37825540 | 37825689 | 37825540 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37825778 | 37825833 | 37825778 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37826647 | 37826767 | 37826647 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37826868 | 37827029 | 37826868 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37827136 | 37827279 | 37827136 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37827415 | 37827633 | 37827415 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37827745 | 37827912 | 37827745 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | CDS | 37828002 | 37828103 | 37828002 | ID=Msa0250020-mRNA-1:cds;Parent=Msa0250020-mRNA-1 |
chr2_2 | three_prime_UTR | 37828104 | 37828587 | 37828104 | ID=Msa0250020-mRNA-1:three_prime_utr;Parent=Msa0250020-mRNA-1 |
Gene Sequence |
Protein sequence |