AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0200580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200580 MtrunA17_Chr2g0296381 99.596 742 3 0 1 742 1 742 0.0 1527
Msa0200580 MtrunA17_Chr4g0067011 93.396 742 49 0 1 742 3 744 0.0 1443
Msa0200580 MtrunA17_Chr7g0268881 85.347 389 57 0 354 742 1 389 0.0 703
Msa0200580 MtrunA17_Chr7g0268891 72.189 338 92 1 3 340 2 337 0.0 521
Msa0200580 MtrunA17_Chr8g0361901 34.225 710 428 13 43 742 51 731 4.86e-131 405
Msa0200580 MtrunA17_Chr6g0453061 33.513 743 449 14 10 742 23 730 1.14e-126 394
Msa0200580 MtrunA17_Chr5g0416711 34.153 732 439 15 23 742 32 732 1.05e-121 381
Msa0200580 MtrunA17_Chr6g0453081 32.571 743 456 15 10 742 23 730 1.05e-120 379
Msa0200580 MtrunA17_Chr1g0166181 35.455 660 396 11 92 742 101 739 4.58e-120 377
Msa0200580 MtrunA17_Chr2g0285881 33.194 720 433 14 34 742 110 792 1.62e-118 374
Msa0200580 MtrunA17_Chr1g0166131 34.493 661 401 12 92 742 102 740 6.50e-115 363
Msa0200580 MtrunA17_Chr7g0231701 32.727 660 401 11 92 742 83 708 1.47e-106 341
Msa0200580 MtrunA17_Chr1g0166141 34.983 606 366 9 144 742 90 674 5.87e-104 333
Msa0200580 MtrunA17_Chr7g0231741 40.576 382 211 7 369 742 2 375 1.20e-80 262
Msa0200580 MtrunA17_Chr4g0067071 55.500 200 89 0 7 206 5 204 2.00e-71 232
Msa0200580 MtrunA17_Chr4g0067051 54.412 204 89 2 5 206 3 204 7.08e-68 222
Msa0200580 MtrunA17_Chr4g0067031 51.770 226 101 3 2 222 6 228 1.71e-64 219
Msa0200580 MtrunA17_Chr5g0416691 36.562 413 238 10 341 742 2 401 2.85e-64 219
Msa0200580 MtrunA17_Chr7g0231791 36.010 411 243 9 341 742 2 401 3.35e-63 216
Msa0200580 MtrunA17_Chr4g0067381 52.683 205 94 1 2 206 4 205 4.87e-62 206
Msa0200580 MtrunA17_Chr5g0416831 34.557 327 167 7 423 742 3 289 4.78e-49 174
Msa0200580 MtrunA17_Chr5g0416731 26.498 434 273 11 44 443 25 446 2.18e-39 151
Msa0200580 MtrunA17_Chr7g0231721 26.765 340 227 8 48 385 29 348 2.72e-35 137
Msa0200580 MtrunA17_Chr7g0231581 26.710 307 206 6 76 380 22 311 4.09e-32 127
Msa0200580 MtrunA17_Chr5g0416901 26.710 307 206 5 76 380 46 335 6.80e-32 127
Msa0200580 MtrunA17_Chr7g0231751 27.891 294 186 7 32 305 21 308 1.60e-28 116
Msa0200580 MtrunA17_Chr7g0231571 29.464 224 152 4 76 297 22 241 5.79e-27 110
Msa0200580 MtrunA17_Chr4g0074661 58.427 89 36 1 1 89 1 88 7.82e-27 105
Msa0200580 MtrunA17_Chr5g0416911 29.018 224 153 4 76 297 30 249 8.66e-27 110
Msa0200580 MtrunA17_Chr5g0416681 26.027 219 156 2 89 304 36 251 2.61e-19 88.2
Msa0200580 MtrunA17_Chr7g0231801 26.027 219 156 2 89 304 36 251 2.98e-19 88.2
Msa0200580 MtrunA17_Chr4g0068101 51.087 92 45 0 75 166 14 105 2.92e-17 78.2
Msa0200580 MtrunA17_Chr1g0166151 24.719 178 125 5 92 267 14 184 1.78e-12 66.6
Msa0200580 MtrunA17_Chr2g0285291 76.923 39 9 0 618 656 30 68 3.27e-12 63.2
Msa0200580 MtrunA17_Chr4g0042591 28.962 183 118 4 423 596 553 732 4.92e-12 69.7
Msa0200580 MtrunA17_Chr7g0222201 26.768 198 135 3 423 611 563 759 8.20e-12 68.9
Msa0200580 MtrunA17_Chr4g0042651 27.225 191 129 3 423 604 553 742 1.41e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0200580 AT4G02570.4 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0200580 AT4G02570.2 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0200580 AT4G02570.1 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0200580 AT4G02570.3 81.081 740 137 1 3 742 2 738 0.0 1278
Msa0200580 AT1G02980.1 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0200580 AT1G02980.2 65.188 744 255 4 1 742 1 742 0.0 1030
Msa0200580 AT1G43140.1 65.405 740 225 3 4 742 12 721 0.0 1005
Msa0200580 AT1G59790.2 57.552 384 142 3 1 382 6 370 6.37e-153 449
Msa0200580 AT1G59790.1 57.527 372 137 3 1 370 6 358 1.72e-147 436
Msa0200580 AT1G26830.1 34.312 749 434 14 10 742 26 732 9.45e-135 416
Msa0200580 AT1G69670.1 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0200580 AT1G69670.2 34.979 709 424 13 43 742 52 732 3.02e-134 414
Msa0200580 AT5G46210.1 34.123 718 423 16 37 742 113 792 6.02e-111 355
Msa0200580 AT1G59800.1 54.098 244 108 1 7 250 7 246 2.09e-88 278
Msa0200580 AT2G04660.1 27.041 196 133 2 423 611 543 735 9.25e-11 65.9

Find 184 sgRNAs with CRISPR-Local

Find 592 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTCTGACCACTGGTTTC+TGG 0.082911 2_1:-20793352 Msa0200580:CDS
TTCTCGTTTCTTTCACTATT+TGG 0.108715 2_1:-20797310 Msa0200580:CDS
GCACGATTCTTTACCGAAAA+AGG 0.119181 2_1:-20800708 Msa0200580:five_prime_UTR
CGCAATTCCTATTTCCAATA+TGG 0.172526 2_1:+20791904 None:intergenic
CCTTCACCGAAACCTTTATC+AGG 0.234716 2_1:-20800753 Msa0200580:five_prime_UTR
CAGGTTTACAAGGAAGTAAA+TGG 0.245353 2_1:-20797115 Msa0200580:CDS
CATTATCTTTGTCTCTTTCC+AGG 0.286661 2_1:+20792262 None:intergenic
GAATCGAAACCTCACTTCTA+TGG 0.303904 2_1:-20791809 Msa0200580:three_prime_UTR
TCCCACCCCATATTGGAAAT+AGG 0.304343 2_1:-20791911 Msa0200580:three_prime_UTR
CACAACCTGCTTAAATATAC+TGG 0.307077 2_1:+20796218 None:intergenic
GCTGACTTGCTTTCGTGATT+TGG 0.326859 2_1:-20797238 Msa0200580:intron
GCAGTTAGGCCGCATGTTTA+AGG 0.326909 2_1:-20792426 Msa0200580:intron
TTAGATATATTTGTGGAGAT+TGG 0.327866 2_1:-20796929 Msa0200580:CDS
TGCAAATTTGTTCAAGTACT+TGG 0.329885 2_1:-20792241 Msa0200580:CDS
AATCAGGACAAGAATCTTCT+AGG 0.335743 2_1:+20796813 None:intergenic
ACTTACTTGGATTTATTCCT+TGG 0.340182 2_1:-20793125 Msa0200580:CDS
TCAATTCCGGGGTCTACATT+AGG 0.343246 2_1:+20793386 None:intergenic
AATATTCCTCAAAGCTTGTT+TGG 0.345806 2_1:+20793420 None:intergenic
AAATTTCCCACTTATATTGC+AGG 0.345820 2_1:+20793099 None:intergenic
GCAATTCCTATTTCCAATAT+GGG 0.346266 2_1:+20791905 None:intergenic
GGTTGCAGAGTTTGCTGTTA+AGG 0.347092 2_1:-20800111 Msa0200580:intron
ACAGAAGCTGAAGAATATTC+TGG 0.348230 2_1:-20800016 Msa0200580:CDS
TGAATTAAATTCAAAATAAT+CGG 0.349101 2_1:+20792736 None:intergenic
TGTTGTTTACCTATAAAATT+CGG 0.355958 2_1:+20794496 None:intergenic
TTCTTAATTGCCTTGACATC+AGG 0.359018 2_1:+20792315 None:intergenic
ACTGAGTTATTCTGAGATAA+TGG 0.365223 2_1:-20792867 Msa0200580:CDS
TGTGGAATAGAGTATGATTC+TGG 0.367247 2_1:+20794874 None:intergenic
CTAAGCACAGAAAACTTACT+TGG 0.371035 2_1:-20793138 Msa0200580:CDS
ACCATAAAATCATGGTTAGA+TGG 0.374090 2_1:-20797335 Msa0200580:CDS
GGTAATATTGCTTTCGTGCT+TGG 0.374335 2_1:+20792761 None:intergenic
CCTCAATCTTCCTGCAGAAA+TGG 0.374444 2_1:-20793309 Msa0200580:intron
GCTTGAAACGGGAGAAAGAT+AGG 0.374850 2_1:-20796696 Msa0200580:CDS
CACCAACGTTGTACCTTCTT+CGG 0.375640 2_1:+20796071 None:intergenic
ACTTATAGCTCCTTCCTTCA+AGG 0.379766 2_1:+20792114 None:intergenic
GTTACTCTCAATTTCCTTGA+AGG 0.383477 2_1:-20792128 Msa0200580:three_prime_UTR
TTATTTCTCCCACCCCATAT+TGG 0.383729 2_1:-20791918 Msa0200580:three_prime_UTR
CTTCCTCCGCTTAATGAAGT+TGG 0.395619 2_1:-20797261 Msa0200580:CDS
AGCCAGCCGATACTTGGATA+TGG 0.398900 2_1:+20792074 None:intergenic
TTGCGTTACTTTAGTTTAAG+TGG 0.403889 2_1:-20791886 Msa0200580:three_prime_UTR
TTCTAAAATACCCAAAGGCT+TGG 0.406125 2_1:-20796250 Msa0200580:CDS
TGTGATAATATTCTCAAGAA+AGG 0.408911 2_1:-20794699 Msa0200580:CDS
TATAATTAAGTAGGCCTAGA+TGG 0.410312 2_1:-20792009 Msa0200580:three_prime_UTR
GGGGTGGGAGAAATAATTAA+TGG 0.411150 2_1:+20791925 None:intergenic
TCAGAGCTGAACTGAGGTTC+AGG 0.411217 2_1:+20799985 None:intergenic
TACAGTAGCCAGCCGATACT+TGG 0.411984 2_1:+20792068 None:intergenic
CTTGTACTTGGCACATGATA+AGG 0.420595 2_1:+20792799 None:intergenic
TTCCTCCGCTTAATGAAGTT+GGG 0.422753 2_1:-20797260 Msa0200580:CDS
AGAAACCCTGATAAAGGTTT+CGG 0.422836 2_1:+20800747 None:intergenic
AGCGGTTGGGAATAGTCATT+TGG 0.424285 2_1:+20799819 None:intergenic
AATGTCTGCAGCCGGAGAAA+AGG 0.425273 2_1:-20795069 Msa0200580:intron
GGAGATTGGAATGGGGCATA+TGG 0.426092 2_1:-20796915 Msa0200580:CDS
CTTGTTAAGAATCTTGTACT+TGG 0.426803 2_1:+20792787 None:intergenic
TAGCGAGCCCAAGTTATTAG+AGG 0.429320 2_1:-20796650 Msa0200580:intron
AGTAACTGTCAAGTCAATTC+CGG 0.431096 2_1:+20793373 None:intergenic
TGCTTAAATATACTGGAAAC+AGG 0.431414 2_1:+20796225 None:intergenic
GGAAACAGGATCCAAGCCTT+TGG 0.432362 2_1:+20796239 None:intergenic
TAAAGAATCGTGCGCGATGA+TGG 0.434250 2_1:+20800718 None:intergenic
AGTAAGAGAAACCCTGATAA+AGG 0.435682 2_1:+20800741 None:intergenic
ATTCTCGAAAGGCTTCAAAC+TGG 0.437747 2_1:-20796838 Msa0200580:CDS
GAAACAGGATCCAAGCCTTT+GGG 0.444806 2_1:+20796240 None:intergenic
ATATTTGTGGAGATTGGAAT+GGG 0.445460 2_1:-20796923 Msa0200580:CDS
AGGTCAAAAGATTTGTAACT+AGG 0.446358 2_1:+20793329 None:intergenic
GTAACTGTCAAGTCAATTCC+GGG 0.448288 2_1:+20793374 None:intergenic
ACAGTTACTGTTCTGACCAC+TGG 0.451735 2_1:-20793359 Msa0200580:CDS
CGGAGAAAAGGGATATTGTT+GGG 0.453652 2_1:-20795057 Msa0200580:CDS
AACCATAAAATGAGTGGGTA+TGG 0.458748 2_1:-20791837 Msa0200580:three_prime_UTR
CTTACTTGGATTTATTCCTT+GGG 0.459703 2_1:-20793124 Msa0200580:CDS
ATGTCTGCAGCCGGAGAAAA+GGG 0.463275 2_1:-20795068 Msa0200580:intron
CAGAGTTTGCTGTTAAGGCT+AGG 0.464358 2_1:-20800106 Msa0200580:five_prime_UTR
ATGTTTGCTCATGTTGGAAA+AGG 0.465005 2_1:-20792044 Msa0200580:three_prime_UTR
ACTCCTCTCATGGTCATCAT+TGG 0.466098 2_1:+20793632 None:intergenic
AGAATATACCTCTAATAACT+TGG 0.467807 2_1:+20796642 None:intergenic
TTCTCATCCACAGGAGGAAG+AGG 0.467931 2_1:+20792569 None:intergenic
GGCGGAGGAGTGCTTGAAAC+GGG 0.472033 2_1:-20796707 Msa0200580:CDS
CTCCATATCCAAGTATCGGC+TGG 0.476819 2_1:-20792076 Msa0200580:three_prime_UTR
CTGTAAATGTTTGCTCATGT+TGG 0.476983 2_1:-20792050 Msa0200580:three_prime_UTR
ACAAAATGTGGCAAGCAGTT+CGG 0.477078 2_1:+20794719 None:intergenic
CCGGAGAAAAGGGATATTGT+TGG 0.478111 2_1:-20795058 Msa0200580:CDS
TGTTTCCAGTATATTTAAGC+AGG 0.481609 2_1:-20796223 Msa0200580:intron
TGGTCAATTTACTTCAAAGA+TGG 0.482034 2_1:-20793580 Msa0200580:CDS
TGGATCGATACTTTATTGCT+CGG 0.482660 2_1:-20797290 Msa0200580:CDS
TATAAATATACCATTTCTGC+AGG 0.482865 2_1:+20793299 None:intergenic
TATTGTTGGGTTACAAGAGC+AGG 0.483324 2_1:-20795044 Msa0200580:intron
AAATGTATTAGATATATTTG+TGG 0.483791 2_1:-20796936 Msa0200580:CDS
CAAAATTTACAGACAAAATG+AGG 0.486053 2_1:-20792715 Msa0200580:CDS
AATACCTTGAGCATATAATC+AGG 0.490182 2_1:+20796797 None:intergenic
CTTGATCTCTCGAGACTACC+TGG 0.495638 2_1:-20792280 Msa0200580:CDS
AACCGCTGTATGATAAGTAC+AGG 0.495768 2_1:-20799803 Msa0200580:CDS
ATGGAGTGCGTTGAGCAGTT+AGG 0.495951 2_1:-20792440 Msa0200580:CDS
CTCTCAATTTCCTTGAAGGA+AGG 0.497162 2_1:-20792124 Msa0200580:three_prime_UTR
CCATTTCTGCAGGAAGATTG+AGG 0.497896 2_1:+20793309 None:intergenic
AGAGTTTGCTGTTAAGGCTA+GGG 0.499982 2_1:-20800105 Msa0200580:five_prime_UTR
AGGTTTACAAGGAAGTAAAT+GGG 0.502271 2_1:-20797114 Msa0200580:CDS
ACTGATTGTGACTACTTACC+AGG 0.504108 2_1:-20793059 Msa0200580:intron
TTGTTAAAATACTCCTCTCA+TGG 0.505784 2_1:+20793622 None:intergenic
ATGCAGCATGTTACCGAAGA+AGG 0.506218 2_1:-20796084 Msa0200580:intron
TATATTTGTGGAGATTGGAA+TGG 0.508425 2_1:-20796924 Msa0200580:CDS
CTATTGATTTAGAGCAAGGA+TGG 0.515189 2_1:-20800059 Msa0200580:CDS
TACTTCAAAGATGGAAGGAA+TGG 0.516259 2_1:-20793571 Msa0200580:intron
AGGTACAACGTTGGTGAAGT+TGG 0.516536 2_1:-20796064 Msa0200580:CDS
TAAGTACAGGGAGGCATTTG+AGG 0.519320 2_1:-20799790 Msa0200580:CDS
GATCAGTTCTATAATTAAGT+AGG 0.520022 2_1:-20792018 Msa0200580:three_prime_UTR
TTCTGCATATTATTCTCGAA+AGG 0.520286 2_1:-20796849 Msa0200580:CDS
TGCGAGAACTTGTGAGGAGG+TGG 0.525524 2_1:-20797362 Msa0200580:CDS
GGAGAACCAAACAAGCTTTG+AGG 0.525529 2_1:-20793426 Msa0200580:CDS
TTGGGTACCTGCAATATAAG+TGG 0.526090 2_1:-20793106 Msa0200580:CDS
GGTTGGGAATAGTCATTTGG+AGG 0.527736 2_1:+20799822 None:intergenic
GTACTTATCATACAGCGGTT+GGG 0.527755 2_1:+20799806 None:intergenic
TGTACTTATCATACAGCGGT+TGG 0.527818 2_1:+20799805 None:intergenic
TCCTATTTCCAATATGGGGT+GGG 0.527993 2_1:+20791910 None:intergenic
TTATCAATTCCAGGTTTACA+AGG 0.528929 2_1:-20797125 Msa0200580:intron
AAGACTATTGATTTAGAGCA+AGG 0.536063 2_1:-20800063 Msa0200580:CDS
CCTGATAAAGGTTTCGGTGA+AGG 0.537083 2_1:+20800753 None:intergenic
TCGTGCTTCTCTCTCAAAGA+AGG 0.537882 2_1:+20797396 None:intergenic
GAGAATATTATCACAAAATG+TGG 0.541209 2_1:+20794707 None:intergenic
TTGTCCTGATTATATGCTCA+AGG 0.542877 2_1:-20796801 Msa0200580:intron
AGGCGGAGGAGTGCTTGAAA+CGG 0.547934 2_1:-20796708 Msa0200580:CDS
AAGTCATCAGATGTGAATGC+AGG 0.552002 2_1:+20791961 None:intergenic
AGTAGTCACAATCAGTTCCA+TGG 0.552172 2_1:+20793066 None:intergenic
GCAGATTCCTCTTCCTCCTG+TGG 0.555922 2_1:-20792576 Msa0200580:intron
GAATATACCTCTAATAACTT+GGG 0.556355 2_1:+20796643 None:intergenic
TTCCTATTTCCAATATGGGG+TGG 0.557692 2_1:+20791909 None:intergenic
AGACAAAATGAGGAGGATCA+AGG 0.560398 2_1:-20792705 Msa0200580:intron
GTGGGCTAACCATAAAATCA+TGG 0.561200 2_1:-20797343 Msa0200580:CDS
CTTCATAATACGCACAATTG+AGG 0.561336 2_1:+20792496 None:intergenic
ACTTATATTGCAGGTACCCA+AGG 0.565881 2_1:+20793108 None:intergenic
CGCACTCCATCACTAACTGT+TGG 0.568475 2_1:+20792453 None:intergenic
CTTCACCGAAACCTTTATCA+GGG 0.570432 2_1:-20800752 Msa0200580:five_prime_UTR
AACAGTCGTTCACATATGCC+AGG 0.571635 2_1:+20794898 None:intergenic
AATTGAAGAAACACTTGAGA+AGG 0.575640 2_1:-20794649 Msa0200580:intron
CTTAGGTTGAAGACTTGTCA+AGG 0.575826 2_1:-20796287 Msa0200580:intron
TGCAGAAGTGTCTTTGAGCA+TGG 0.576831 2_1:+20796865 None:intergenic
TGGGCTCGCTACTAGAGTGC+AGG 0.577235 2_1:+20796662 None:intergenic
TACAGATTTGACACTGGCAA+AGG 0.577327 2_1:-20793447 Msa0200580:CDS
AAATTACCAACAGTTAGTGA+TGG 0.577805 2_1:-20792459 Msa0200580:CDS
TATTGATTTAGAGCAAGGAT+GGG 0.578636 2_1:-20800058 Msa0200580:CDS
AAGCTGAAGAATATTCTGGA+AGG 0.583829 2_1:-20800012 Msa0200580:CDS
CAAGTACAAGATTCTTAACA+AGG 0.590535 2_1:-20792786 Msa0200580:CDS
CAATTTACTTCAAAGATGGA+AGG 0.590929 2_1:-20793576 Msa0200580:CDS
CTTGAAACGGGAGAAAGATA+GGG 0.592854 2_1:-20796695 Msa0200580:CDS
AGAACATACAAGAGAAATCA+CGG 0.593996 2_1:+20797078 None:intergenic
CAATTCCTATTTCCAATATG+GGG 0.598728 2_1:+20791906 None:intergenic
AGGGATTATCGATGAGTGAA+CGG 0.601104 2_1:-20800086 Msa0200580:exon
TTAAATTCAAAATAATCGGT+AGG 0.601478 2_1:+20792740 None:intergenic
AGCTGAAGAATATTCTGGAA+GGG 0.602844 2_1:-20800011 Msa0200580:CDS
GTCAGCCCAACTTCATTAAG+CGG 0.606052 2_1:+20797255 None:intergenic
AAGATTGATCAAGAACGTGA+AGG 0.609119 2_1:-20796986 Msa0200580:CDS
AGATGCAGCAAGTAACAAGA+AGG 0.609700 2_1:-20796037 Msa0200580:intron
GCAGATAGCAAAACAAGATG+AGG 0.611050 2_1:-20792177 Msa0200580:three_prime_UTR
TGGGTACCTGCAATATAAGT+GGG 0.615117 2_1:-20793105 Msa0200580:CDS
AGTTATTGAGGATGTTGACA+AGG 0.621478 2_1:-20792540 Msa0200580:CDS
AGAGCTGCATGACAAGTACC+TGG 0.622098 2_1:-20794916 Msa0200580:CDS
TTATGTTGCGAGAACTTGTG+AGG 0.624498 2_1:-20797368 Msa0200580:CDS
AATAATCCTAATGTAGACCC+CGG 0.627294 2_1:-20793392 Msa0200580:CDS
GATAATATTCTCAAGAAAGG+CGG 0.632646 2_1:-20794696 Msa0200580:CDS
TGCATTACTTAGAGATGACA+AGG 0.635739 2_1:-20796389 Msa0200580:intron
AGAATAACTCAGTCTATCTG+AGG 0.636581 2_1:+20792877 None:intergenic
ATCGATACTTTATTGCTCGG+AGG 0.640352 2_1:-20797287 Msa0200580:CDS
ACAAAATTGAAGCAACAATG+TGG 0.645513 2_1:-20793603 Msa0200580:CDS
TTGTGCGTATTATGAAGAGT+CGG 0.646014 2_1:-20792490 Msa0200580:CDS
GCGTATTATGAAGAGTCGGA+AGG 0.646046 2_1:-20792486 Msa0200580:CDS
TATCCTATAGGCTCTTAAGG+AGG 0.649623 2_1:-20794787 Msa0200580:intron
ATGTCAAGGCAATTAAGAAG+CGG 0.652248 2_1:-20792311 Msa0200580:CDS
AGCCCAACTTCATTAAGCGG+AGG 0.655556 2_1:+20797258 None:intergenic
AAATATATACCTTAAACATG+CGG 0.656922 2_1:+20792417 None:intergenic
ATAGCAAAACAAGATGAGGA+TGG 0.657624 2_1:-20792173 Msa0200580:three_prime_UTR
GTTTGCGCAGCCTGATGTCA+AGG 0.659356 2_1:-20792325 Msa0200580:intron
TATTTGTGGAGATTGGAATG+GGG 0.661334 2_1:-20796922 Msa0200580:CDS
TCAGGTTACAGATTTGACAC+TGG 0.667474 2_1:-20793453 Msa0200580:intron
GCGAGAACTTGTGAGGAGGT+GGG 0.667854 2_1:-20797361 Msa0200580:CDS
GTGCCAATGATGACCATGAG+AGG 0.678765 2_1:-20793635 Msa0200580:CDS
TCCCTGTACTTATCATACAG+CGG 0.679899 2_1:+20799801 None:intergenic
AAATTGAAGCAACAATGTGG+TGG 0.685406 2_1:-20793600 Msa0200580:CDS
CGCAACGCACCATAGAAGTG+AGG 0.687081 2_1:+20791800 None:intergenic
TGAACCTCAGTTCAGCTCTG+AGG 0.696799 2_1:-20799983 Msa0200580:CDS
TGTTGCGAGAACTTGTGAGG+AGG 0.698023 2_1:-20797365 Msa0200580:CDS
ACCGCTGTATGATAAGTACA+GGG 0.699917 2_1:-20799802 Msa0200580:CDS
TAGTCCTCAGAGCTGAACTG+AGG 0.704381 2_1:+20799979 None:intergenic
AATTTACAGACAAAATGAGG+AGG 0.707626 2_1:-20792712 Msa0200580:CDS
GTAACTAGGCCAGAAACCAG+TGG 0.710105 2_1:+20793343 None:intergenic
GAATCATACTCTATTCCACA+AGG 0.714768 2_1:-20794871 Msa0200580:intron
TACCGAAGAAGGTACAACGT+TGG 0.733065 2_1:-20796073 Msa0200580:CDS
TAACTGTCAAGTCAATTCCG+GGG 0.734741 2_1:+20793375 None:intergenic
GCTGTATGATAAGTACAGGG+AGG 0.780823 2_1:-20799799 Msa0200580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTAAAATTTTTAT+TGG - chr2_1:20792098-20792117 Msa0200580:three_prime_UTR 0.0%
!!! TTATCATTATTTTGATTTTT+TGG - chr2_1:20792413-20792432 Msa0200580:intron 10.0%
!!! TGTTTTAGTTTTATATTAAT+TGG - chr2_1:20792703-20792722 Msa0200580:intron 10.0%
!!! GTTTTAGTTTTATATTAATT+GGG - chr2_1:20792704-20792723 Msa0200580:intron 10.0%
!! TTTGTAAAAAAAAAAAATAC+CGG - chr2_1:20793920-20793939 Msa0200580:intron 10.0%
!! TGAATTAAATTCAAAATAAT+CGG + chr2_1:20799895-20799914 None:intergenic 10.0%
!!! TTGATTTTTTGGTTTAAATT+TGG - chr2_1:20792424-20792443 Msa0200580:intron 15.0%
!!! TTTTGTTTGTTTTGATTTTT+TGG - chr2_1:20792451-20792470 Msa0200580:CDS 15.0%
!!! ATGTCTATTTTTTACATTAT+AGG - chr2_1:20793141-20793160 Msa0200580:CDS 15.0%
!!! TGTCTATTTTTTACATTATA+GGG - chr2_1:20793142-20793161 Msa0200580:CDS 15.0%
!! TTGTAAAAAAAAAAAATACC+GGG - chr2_1:20793921-20793940 Msa0200580:intron 15.0%
!!! ATGAAATGATTTATTTTTCT+TGG - chr2_1:20795019-20795038 Msa0200580:intron 15.0%
!!! TGAAATGATTTATTTTTCTT+GGG - chr2_1:20795020-20795039 Msa0200580:intron 15.0%
!!! TTTTTTTTTTTATCAATTCC+AGG - chr2_1:20795494-20795513 Msa0200580:intron 15.0%
!! AAATGTATTAGATATATTTG+TGG - chr2_1:20795692-20795711 Msa0200580:intron 15.0%
!!! GAAATTATAATTTTCAACTT+AGG - chr2_1:20796833-20796852 Msa0200580:CDS 15.0%
!!! AAGACTTCTATATAATTTTA+AGG - chr2_1:20797204-20797223 Msa0200580:intron 15.0%
!!! ATAATTTTAAGGATTCATTA+AGG - chr2_1:20797215-20797234 Msa0200580:intron 15.0%
!!! TAATTTTAAGGATTCATTAA+GGG - chr2_1:20797216-20797235 Msa0200580:intron 15.0%
!! AAAAAATGAAAAAAGATCTT+GGG + chr2_1:20798353-20798372 None:intergenic 15.0%
!! AAAAAAATGAAAAAAGATCT+TGG + chr2_1:20798354-20798373 None:intergenic 15.0%
!!! AATACTTTTTATCTAAATCT+AGG + chr2_1:20799395-20799414 None:intergenic 15.0%
!!! TTTATTGGTTAGTTGAATTT+TGG - chr2_1:20792113-20792132 Msa0200580:three_prime_UTR 20.0%
!!! TTGATTGTTTAGTTGAATTT+TGG - chr2_1:20792244-20792263 Msa0200580:CDS 20.0%
!!! TGATTGTTTAGTTGAATTTT+GGG - chr2_1:20792245-20792264 Msa0200580:CDS 20.0%
!!! TTTCATTGTTGTTGAAATTT+AGG - chr2_1:20792302-20792321 Msa0200580:CDS 20.0%
!! TTGAAATTTAGGAACAATTA+GGG - chr2_1:20792313-20792332 Msa0200580:CDS 20.0%
!!! TTGATTTTTTGGTTGAAATT+TGG - chr2_1:20792462-20792481 Msa0200580:CDS 20.0%
!!! TTTATGTTTTAACGAATTTG+TGG - chr2_1:20792488-20792507 Msa0200580:CDS 20.0%
!!! AATTTAAAATACAATCAGAC+AGG + chr2_1:20792923-20792942 None:intergenic 20.0%
!!! ATTATTTCTTAATCTGGATT+GGG - chr2_1:20793986-20794005 Msa0200580:intron 20.0%
!! ATGTATTCTTATTGTGTAAA+TGG - chr2_1:20794283-20794302 Msa0200580:intron 20.0%
!!! TTATGATTTAAGACAGAATT+GGG + chr2_1:20794677-20794696 None:intergenic 20.0%
!! TTAGTTAACTTACTAATAGT+TGG - chr2_1:20794754-20794773 Msa0200580:CDS 20.0%
!!! GAAATGATTTATTTTTCTTG+GGG - chr2_1:20795021-20795040 Msa0200580:intron 20.0%
!!! AAATGATTTATTTTTCTTGG+GGG - chr2_1:20795022-20795041 Msa0200580:intron 20.0%
!! TACATAATCAAAGGAAAAAA+CGG + chr2_1:20795142-20795161 None:intergenic 20.0%
!! ATTAACAGATACATAATCAA+AGG + chr2_1:20795151-20795170 None:intergenic 20.0%
!!! ATAACTGAAATTCACTTTTT+GGG - chr2_1:20795197-20795216 Msa0200580:intron 20.0%
!! AAACAGAAGCTAAATAATAT+TGG + chr2_1:20795880-20795899 None:intergenic 20.0%
!! ACATTTCACAAAGAAAAAAA+AGG + chr2_1:20796141-20796160 None:intergenic 20.0%
!!! ATTTTGACAACATATATAGA+AGG + chr2_1:20796460-20796479 None:intergenic 20.0%
!! TCTATATATGTTGTCAAAAT+CGG - chr2_1:20796460-20796479 Msa0200580:CDS 20.0%
!!! TGATTGATAATTTTCAACTT+AGG - chr2_1:20796767-20796786 Msa0200580:intron 20.0%
!!! TGTATATTATTTTCTGTTAC+TGG - chr2_1:20796790-20796809 Msa0200580:intron 20.0%
!!! AAGATTATTACTATTTTGCT+TGG + chr2_1:20797132-20797151 None:intergenic 20.0%
!! ATTCATTAAGGGAATATAAA+AGG - chr2_1:20797227-20797246 Msa0200580:intron 20.0%
!! TATTATAAACATAAACTGTG+GGG + chr2_1:20797391-20797410 None:intergenic 20.0%
!! CTATTATAAACATAAACTGT+GGG + chr2_1:20797392-20797411 None:intergenic 20.0%
!! TTGCAGTTAAACTATAAAAT+TGG + chr2_1:20797625-20797644 None:intergenic 20.0%
!! AATTGATATTGATCCATTTA+TGG - chr2_1:20797643-20797662 Msa0200580:intron 20.0%
!!! ATTTCTTTTTATCTATTTGC+AGG - chr2_1:20798067-20798086 Msa0200580:intron 20.0%
!!! TGTTGTTTACCTATAAAATT+CGG + chr2_1:20798135-20798154 None:intergenic 20.0%
!! TGATAATAGAAATCTCATAT+TGG + chr2_1:20798324-20798343 None:intergenic 20.0%
!! AAAAATGAAAAAAGATCTTG+GGG + chr2_1:20798352-20798371 None:intergenic 20.0%
!!! AATTTTTATTTAGCCCTTTA+AGG + chr2_1:20798453-20798472 None:intergenic 20.0%
!!! GAAAAACTATTAAAAGCATA+TGG + chr2_1:20798585-20798604 None:intergenic 20.0%
!!! ATTTTTGGAAAAGAAAAAAC+TGG - chr2_1:20798641-20798660 Msa0200580:intron 20.0%
!! AAAATACAAACAAAACTGTA+AGG + chr2_1:20798762-20798781 None:intergenic 20.0%
!! AGAAAATTCCATTGTTTATT+TGG - chr2_1:20799146-20799165 Msa0200580:intron 20.0%
!! GAAAATTCCATTGTTTATTT+GGG - chr2_1:20799147-20799166 Msa0200580:intron 20.0%
!!! CTGTTCTCTTTATTTATTTT+AGG - chr2_1:20799425-20799444 Msa0200580:intron 20.0%
!! TTAAATTCAAAATAATCGGT+AGG + chr2_1:20799891-20799910 None:intergenic 20.0%
!! AAATATATACCTTAAACATG+CGG + chr2_1:20800214-20800233 None:intergenic 20.0%
!! TTAAAAACCATAAAATGAGT+GGG - chr2_1:20800786-20800805 Msa0200580:five_prime_UTR 20.0%
!!! GATTTGTTTTGTTATGCTTA+TGG - chr2_1:20791960-20791979 Msa0200580:three_prime_UTR 25.0%
!!! TGGTTTTGTTATACTAGATT+TGG - chr2_1:20791980-20791999 Msa0200580:three_prime_UTR 25.0%
! TTGGTTAAATCTGAGAATTT+AGG - chr2_1:20791999-20792018 Msa0200580:three_prime_UTR 25.0%
! TGGTTAAATCTGAGAATTTA+GGG - chr2_1:20792000-20792019 Msa0200580:three_prime_UTR 25.0%
! ATGTTTATTGCGATTTCATT+CGG - chr2_1:20792049-20792068 Msa0200580:three_prime_UTR 25.0%
!!! GGAATTTGATTTGAGAATTT+AGG - chr2_1:20792134-20792153 Msa0200580:three_prime_UTR 25.0%
!! TGAGAATTTAGGATTTAGTT+TGG - chr2_1:20792145-20792164 Msa0200580:three_prime_UTR 25.0%
!! GAGAATTTAGGATTTAGTTT+GGG - chr2_1:20792146-20792165 Msa0200580:three_prime_UTR 25.0%
!!! AGAATTTAGGATTTAGTTTG+GGG - chr2_1:20792147-20792166 Msa0200580:three_prime_UTR 25.0%
! GTTGAAATTTAGGAACAATT+AGG - chr2_1:20792312-20792331 Msa0200580:CDS 25.0%
! TGAAATTTAGGAACAATTAG+GGG - chr2_1:20792314-20792333 Msa0200580:CDS 25.0%
! TTAACGAATTTGTGGAAATT+TGG - chr2_1:20792496-20792515 Msa0200580:CDS 25.0%
!! TTTTTACATTATAGGGCTAT+TGG - chr2_1:20793149-20793168 Msa0200580:CDS 25.0%
!! TCCTCAACAAAATAATGTTT+TGG - chr2_1:20793343-20793362 Msa0200580:CDS 25.0%
!!! TCCAAAACATTATTTTGTTG+AGG + chr2_1:20793347-20793366 None:intergenic 25.0%
!!! TTGATTTTTGAGTAAGTAGT+TGG - chr2_1:20793403-20793422 Msa0200580:CDS 25.0%
!! GATTATTTCTTAATCTGGAT+TGG - chr2_1:20793985-20794004 Msa0200580:intron 25.0%
! CTGCTTCAATTTAGAAAAAT+AGG + chr2_1:20794034-20794053 None:intergenic 25.0%
!!! TGGGTTTTATTTATATAACC+TGG + chr2_1:20794063-20794082 None:intergenic 25.0%
! AGGTTATATAAATAAAACCC+AGG - chr2_1:20794062-20794081 Msa0200580:intron 25.0%
!!! GTACACTTTTTCGTATTAAT+AGG - chr2_1:20794470-20794489 Msa0200580:intron 25.0%
!! CTTATGATTTAAGACAGAAT+TGG + chr2_1:20794678-20794697 None:intergenic 25.0%
!! CTTTTAGGCAGTAATAAAAA+AGG + chr2_1:20794937-20794956 None:intergenic 25.0%
!!! AATGATTTATTTTTCTTGGG+GGG - chr2_1:20795023-20795042 Msa0200580:intron 25.0%
!!! CATAACTGAAATTCACTTTT+TGG - chr2_1:20795196-20795215 Msa0200580:intron 25.0%
! ATCTTTAAACAAAAGAGGAT+AGG + chr2_1:20795627-20795646 None:intergenic 25.0%
! GATCAATCTTTAAACAAAAG+AGG + chr2_1:20795632-20795651 None:intergenic 25.0%
! TTAGATATATTTGTGGAGAT+TGG - chr2_1:20795699-20795718 Msa0200580:intron 25.0%
! TTAGCTTCTGTTTAATATTG+TGG - chr2_1:20795887-20795906 Msa0200580:intron 25.0%
! GAATATACCTCTAATAACTT+GGG + chr2_1:20795988-20796007 None:intergenic 25.0%
! AGAATATACCTCTAATAACT+TGG + chr2_1:20795989-20796008 None:intergenic 25.0%
!!! AATGTTCTTTTTCAAGAAGT+TGG + chr2_1:20796209-20796228 None:intergenic 25.0%
! CTATATATGTTGTCAAAATC+GGG - chr2_1:20796461-20796480 Msa0200580:intron 25.0%
! TATATATGTTGTCAAAATCG+GGG - chr2_1:20796462-20796481 Msa0200580:intron 25.0%
! ATTGTAACACAAATTTGAAC+AGG + chr2_1:20796721-20796740 None:intergenic 25.0%
! AAATGACACTAAATATGACA+AGG + chr2_1:20796915-20796934 None:intergenic 25.0%
! TGTTTACGCATAAATTCAAA+AGG - chr2_1:20797078-20797097 Msa0200580:intron 25.0%
!! GCTTGGTAATAACATTTATA+AGG + chr2_1:20797115-20797134 None:intergenic 25.0%
! ATTATAAACATAAACTGTGG+GGG + chr2_1:20797390-20797409 None:intergenic 25.0%
! CCTATTATAAACATAAACTG+TGG + chr2_1:20797393-20797412 None:intergenic 25.0%
! CCACAGTTTATGTTTATAAT+AGG - chr2_1:20797390-20797409 Msa0200580:CDS 25.0%
!! AAAGAAAATTTTGTCCGATA+AGG + chr2_1:20797427-20797446 None:intergenic 25.0%
! ATGTAAAGCACAAAATCAAA+CGG + chr2_1:20797492-20797511 None:intergenic 25.0%
!! TCTGAAAGATTTTATCCTAT+AGG - chr2_1:20797829-20797848 Msa0200580:intron 25.0%
!!! TTTTGAGATATTTTGCAACA+AGG - chr2_1:20797865-20797884 Msa0200580:intron 25.0%
!!! TTTGAGATATTTTGCAACAA+GGG - chr2_1:20797866-20797885 Msa0200580:intron 25.0%
! GAGAATATTATCACAAAATG+TGG + chr2_1:20797924-20797943 None:intergenic 25.0%
! TGTGATAATATTCTCAAGAA+AGG - chr2_1:20797929-20797948 Msa0200580:intron 25.0%
! AATCATCAAGTTTAAGCATA+TGG + chr2_1:20798030-20798049 None:intergenic 25.0%
!! ATTTGTTTGCCGAATTTTAT+AGG - chr2_1:20798123-20798142 Msa0200580:intron 25.0%
! ATAGGTAAACAACATAGAAA+AGG - chr2_1:20798141-20798160 Msa0200580:intron 25.0%
! TCCAAAAGATTTAAACCATT+TGG - chr2_1:20798251-20798270 Msa0200580:intron 25.0%
!! TCCAAATGGTTTAAATCTTT+TGG + chr2_1:20798255-20798274 None:intergenic 25.0%
! ATCTCATATTGGACAAAATA+GGG + chr2_1:20798313-20798332 None:intergenic 25.0%
! AATCTCATATTGGACAAAAT+AGG + chr2_1:20798314-20798333 None:intergenic 25.0%
! AAAATGAAAAAAGATCTTGG+GGG + chr2_1:20798351-20798370 None:intergenic 25.0%
!!! GAAAGTCGATAGTTATTTTT+GGG - chr2_1:20798422-20798441 Msa0200580:intron 25.0%
!!! AAAGTCGATAGTTATTTTTG+GGG - chr2_1:20798423-20798442 Msa0200580:intron 25.0%
!!! TTTGCTGTTCTGTTAATATA+AGG - chr2_1:20798678-20798697 Msa0200580:intron 25.0%
! ATGACATTGTTGAATCTTTA+TGG - chr2_1:20798791-20798810 Msa0200580:intron 25.0%
! TATAAATATACCATTTCTGC+AGG + chr2_1:20799332-20799351 None:intergenic 25.0%
! TATGCATAAGAAATATAACC+TGG + chr2_1:20799590-20799609 None:intergenic 25.0%
! GATATGTACAAATTCTTGTA+TGG - chr2_1:20799659-20799678 Msa0200580:intron 25.0%
!!! GTTGTGTTTTGCTTTTTAAT+AGG - chr2_1:20799704-20799723 Msa0200580:intron 25.0%
! CAAAATTTACAGACAAAATG+AGG - chr2_1:20799913-20799932 Msa0200580:intron 25.0%
! TGAGAAGAAAAAAGTTATTG+AGG - chr2_1:20800076-20800095 Msa0200580:CDS 25.0%
! ACAAAACAATGTCATAAAAG+GGG + chr2_1:20800239-20800258 None:intergenic 25.0%
! GACAAAACAATGTCATAAAA+GGG + chr2_1:20800240-20800259 None:intergenic 25.0%
!!! CTTTTATGACATTGTTTTGT+CGG - chr2_1:20800239-20800258 Msa0200580:intron 25.0%
! TATAATCCTGAATTGTGATA+TGG - chr2_1:20800273-20800292 Msa0200580:intron 25.0%
! GATCAGTTCTATAATTAAGT+AGG - chr2_1:20800610-20800629 Msa0200580:intron 25.0%
! CTTAAAAACCATAAAATGAG+TGG - chr2_1:20800785-20800804 Msa0200580:five_prime_UTR 25.0%
! TGAGAATTTAGGGTTTAGTT+TGG - chr2_1:20792010-20792029 Msa0200580:three_prime_UTR 30.0%
! GAGAATTTAGGGTTTAGTTT+GGG - chr2_1:20792011-20792030 Msa0200580:three_prime_UTR 30.0%
!! AGAATTTAGGGTTTAGTTTG+GGG - chr2_1:20792012-20792031 Msa0200580:three_prime_UTR 30.0%
!! GAATTTAGGATTTAGTTTGG+GGG - chr2_1:20792148-20792167 Msa0200580:three_prime_UTR 30.0%
!! AATTTAGGATTTAGTTTGGG+GGG - chr2_1:20792149-20792168 Msa0200580:three_prime_UTR 30.0%
TTACTGCAATTTCATTCAGT+TGG - chr2_1:20792190-20792209 Msa0200580:three_prime_UTR 30.0%
!! AAGACTATTGATTTAGAGCA+AGG - chr2_1:20792565-20792584 Msa0200580:CDS 30.0%
!! TATTGATTTAGAGCAAGGAT+GGG - chr2_1:20792570-20792589 Msa0200580:CDS 30.0%
! TTGTTTGCAACTTTTCTACT+AGG - chr2_1:20793066-20793085 Msa0200580:CDS 30.0%
! TGTTTGCAACTTTTCTACTA+GGG - chr2_1:20793067-20793086 Msa0200580:CDS 30.0%
! TGACGCATTTTCTTCTTTTT+AGG - chr2_1:20793250-20793269 Msa0200580:intron 30.0%
!! AAAGTAGTTGGTAGCAAAAA+GGG + chr2_1:20793623-20793642 None:intergenic 30.0%
! AATAGTGGTTTGTCCAAATT+CGG - chr2_1:20793862-20793881 Msa0200580:intron 30.0%
! TTTTCTAAATTGAAGCAGCT+TGG - chr2_1:20794036-20794055 Msa0200580:intron 30.0%
!!! CCGTTTTCATTTTAAAACCT+GGG + chr2_1:20794082-20794101 None:intergenic 30.0%
!!! CCCAGGTTTTAAAATGAAAA+CGG - chr2_1:20794079-20794098 Msa0200580:intron 30.0%
!!! TCCGTTTTCATTTTAAAACC+TGG + chr2_1:20794083-20794102 None:intergenic 30.0%
!!! GGTTTTAAAATGAAAACGGA+AGG - chr2_1:20794083-20794102 Msa0200580:intron 30.0%
AAGTAACTGAACTAAAACAG+AGG + chr2_1:20794257-20794276 None:intergenic 30.0%
TCATGTTCTTCATGAACTTA+TGG - chr2_1:20794332-20794351 Msa0200580:intron 30.0%
! TGATCCAGATCTCTAAATTT+TGG - chr2_1:20794568-20794587 Msa0200580:intron 30.0%
GATTCCAAAATTTAGAGATC+TGG + chr2_1:20794575-20794594 None:intergenic 30.0%
TAACTAAAGCTAGTTAGAGA+GGG + chr2_1:20794741-20794760 None:intergenic 30.0%
TTAACTAAAGCTAGTTAGAG+AGG + chr2_1:20794742-20794761 None:intergenic 30.0%
TTATAGCGTCATTAGTTGAT+TGG - chr2_1:20794839-20794858 Msa0200580:intron 30.0%
TGTGTCTCTTAAAATTTGAC+TGG - chr2_1:20794890-20794909 Msa0200580:CDS 30.0%
ACCATAAAATCATGGTTAGA+TGG - chr2_1:20795293-20795312 Msa0200580:intron 30.0%
TTCTCGTTTCTTTCACTATT+TGG - chr2_1:20795318-20795337 Msa0200580:intron 30.0%
CTACTAATAGAAAACTCTGA+AGG + chr2_1:20795431-20795450 None:intergenic 30.0%
TTATCAATTCCAGGTTTACA+AGG - chr2_1:20795503-20795522 Msa0200580:intron 30.0%
AGGTTTACAAGGAAGTAAAT+GGG - chr2_1:20795514-20795533 Msa0200580:intron 30.0%
AGAACATACAAGAGAAATCA+CGG + chr2_1:20795553-20795572 None:intergenic 30.0%
TATATTTGTGGAGATTGGAA+TGG - chr2_1:20795704-20795723 Msa0200580:intron 30.0%
ATATTTGTGGAGATTGGAAT+GGG - chr2_1:20795705-20795724 Msa0200580:intron 30.0%
TTCTGCATATTATTCTCGAA+AGG - chr2_1:20795779-20795798 Msa0200580:intron 30.0%
AATACCTTGAGCATATAATC+AGG + chr2_1:20795834-20795853 None:intergenic 30.0%
AATATTGTGGCATTCATTAC+AGG - chr2_1:20795900-20795919 Msa0200580:intron 30.0%
! TTGCTATTATTCCAGCTATT+TGG - chr2_1:20796008-20796027 Msa0200580:intron 30.0%
CTTCTTGAAAAAGAACATTC+TGG - chr2_1:20796210-20796229 Msa0200580:intron 30.0%
GGTACTATTTAAGCGTAATA+TGG - chr2_1:20796260-20796279 Msa0200580:CDS 30.0%
TCTTCAACCTAAGCATTTAA+AGG + chr2_1:20796334-20796353 None:intergenic 30.0%
!!! CTCTTTTCTAAAATACCCAA+AGG - chr2_1:20796373-20796392 Msa0200580:intron 30.0%
TGCTTAAATATACTGGAAAC+AGG + chr2_1:20796406-20796425 None:intergenic 30.0%
TGTTTCCAGTATATTTAAGC+AGG - chr2_1:20796405-20796424 Msa0200580:CDS 30.0%
! TTTGTAGTTGTCCTTATTTC+TGG - chr2_1:20796625-20796644 Msa0200580:intron 30.0%
! CTTTTCTATTGCAATAATCG+AGG - chr2_1:20796660-20796679 Msa0200580:CDS 30.0%
AAAACTAGTACCGCAATAAT+CGG - chr2_1:20796683-20796702 Msa0200580:CDS 30.0%
! TTTACACAGAGTGTTAAGAT+AGG + chr2_1:20797000-20797019 None:intergenic 30.0%
TCTTAACACTCTGTGTAAAT+TGG - chr2_1:20797001-20797020 Msa0200580:intron 30.0%
TTATAAACATAAACTGTGGG+GGG + chr2_1:20797389-20797408 None:intergenic 30.0%
GGTAAATTGTTTGCAAAATG+AGG + chr2_1:20797462-20797481 None:intergenic 30.0%
TAAATTAAAATGTCTGCAGC+CGG - chr2_1:20797551-20797570 Msa0200580:intron 30.0%
ATTATACGATCATAACCTTG+TGG + chr2_1:20797775-20797794 None:intergenic 30.0%
! TTTTATCCTATAGGCTCTTA+AGG - chr2_1:20797838-20797857 Msa0200580:intron 30.0%
GATAATATTCTCAAGAAAGG+CGG - chr2_1:20797932-20797951 Msa0200580:intron 30.0%
AATTGAAGAAACACTTGAGA+AGG - chr2_1:20797979-20797998 Msa0200580:intron 30.0%
ACAAAATAGGGAAAACTAAC+GGG + chr2_1:20798301-20798320 None:intergenic 30.0%
GACAAAATAGGGAAAACTAA+CGG + chr2_1:20798302-20798321 None:intergenic 30.0%
!! GGAAAGTCGATAGTTATTTT+TGG - chr2_1:20798421-20798440 Msa0200580:intron 30.0%
!! ATTTTTGGGGAAAACCTTAA+AGG - chr2_1:20798436-20798455 Msa0200580:intron 30.0%
!! TTTTTGGGGAAAACCTTAAA+GGG - chr2_1:20798437-20798456 Msa0200580:intron 30.0%
GAAAGTGAACTGCAATTAAT+TGG - chr2_1:20798522-20798541 Msa0200580:intron 30.0%
!!! GCAGACTGTTTTAGAATTTT+TGG - chr2_1:20798626-20798645 Msa0200580:intron 30.0%
GGAAAAGAAAAAACTGGATA+TGG - chr2_1:20798647-20798666 Msa0200580:intron 30.0%
TAATTAACCGAAACCCAAAA+AGG + chr2_1:20798734-20798753 None:intergenic 30.0%
TTATGAAAGTGAGTTCCATT+AGG + chr2_1:20798900-20798919 None:intergenic 30.0%
ATAATATCATACATCTTGCC+TGG - chr2_1:20798925-20798944 Msa0200580:intron 30.0%
TTGTTAAAATACTCCTCTCA+TGG + chr2_1:20799009-20799028 None:intergenic 30.0%
ACAAAATTGAAGCAACAATG+TGG - chr2_1:20799025-20799044 Msa0200580:intron 30.0%
TGGTCAATTTACTTCAAAGA+TGG - chr2_1:20799048-20799067 Msa0200580:intron 30.0%
CAATTTACTTCAAAGATGGA+AGG - chr2_1:20799052-20799071 Msa0200580:intron 30.0%
GATAGAACCCAAATAAACAA+TGG + chr2_1:20799157-20799176 None:intergenic 30.0%
! TTGTTTATTTGGGTTCTATC+AGG - chr2_1:20799157-20799176 Msa0200580:intron 30.0%
! AATATTCCTCAAAGCTTGTT+TGG + chr2_1:20799211-20799230 None:intergenic 30.0%
AGGTCAAAAGATTTGTAACT+AGG + chr2_1:20799302-20799321 None:intergenic 30.0%
AGATACTATCGAACATTTCT+GGG + chr2_1:20799370-20799389 None:intergenic 30.0%
TAGATACTATCGAACATTTC+TGG + chr2_1:20799371-20799390 None:intergenic 30.0%
! TAAGTGTGTAGAAGTTTTCA+AGG - chr2_1:20799449-20799468 Msa0200580:intron 30.0%
ACTTACTTGGATTTATTCCT+TGG - chr2_1:20799503-20799522 Msa0200580:intron 30.0%
CTTACTTGGATTTATTCCTT+GGG - chr2_1:20799504-20799523 Msa0200580:intron 30.0%
AAATTTCCCACTTATATTGC+AGG + chr2_1:20799532-20799551 None:intergenic 30.0%
GAAATTTGAACCAAAAACCA+TGG - chr2_1:20799545-20799564 Msa0200580:intron 30.0%
TGGATTTATCTTTACTTACC+CGG - chr2_1:20799679-20799698 Msa0200580:intron 30.0%
AAAAAGCAAAACACAACATC+CGG + chr2_1:20799701-20799720 None:intergenic 30.0%
!! ACTGAGTTATTCTGAGATAA+TGG - chr2_1:20799761-20799780 Msa0200580:intron 30.0%
CTTGTTAAGAATCTTGTACT+TGG + chr2_1:20799844-20799863 None:intergenic 30.0%
CAAGTACAAGATTCTTAACA+AGG - chr2_1:20799842-20799861 Msa0200580:CDS 30.0%
AATTTACAGACAAAATGAGG+AGG - chr2_1:20799916-20799935 Msa0200580:intron 30.0%
!!! CGTAATTATTTTAGTCTCTG+TGG - chr2_1:20799989-20800008 Msa0200580:CDS 30.0%
AAATTACCAACAGTTAGTGA+TGG - chr2_1:20800169-20800188 Msa0200580:intron 30.0%
CGACAAAACAATGTCATAAA+AGG + chr2_1:20800241-20800260 None:intergenic 30.0%
CATTATCCATATCACAATTC+AGG + chr2_1:20800282-20800301 None:intergenic 30.0%
! TGCAAATTTGTTCAAGTACT+TGG - chr2_1:20800387-20800406 Msa0200580:intron 30.0%
! TTTTCTCCATATCCAAGTAT+CGG - chr2_1:20800548-20800567 Msa0200580:intron 30.0%
TATAATTAAGTAGGCCTAGA+TGG - chr2_1:20800619-20800638 Msa0200580:intron 30.0%
CAGGCAATAAAAAACCAAAA+AGG + chr2_1:20800651-20800670 None:intergenic 30.0%
CAATTCCTATTTCCAATATG+GGG + chr2_1:20800725-20800744 None:intergenic 30.0%
GCAATTCCTATTTCCAATAT+GGG + chr2_1:20800726-20800745 None:intergenic 30.0%
! TTGCGTTACTTTAGTTTAAG+TGG - chr2_1:20800742-20800761 Msa0200580:five_prime_UTR 30.0%
AGAAACCCTGATAAAGGTTT+CGG + chr2_1:20791884-20791903 None:intergenic 35.0%
AGTAAGAGAAACCCTGATAA+AGG + chr2_1:20791890-20791909 None:intergenic 35.0%
CACGATTCTTTACCGAAAAA+GGG - chr2_1:20791921-20791940 Msa0200580:three_prime_UTR 35.0%
! GAGATAAACGTACCCTTTTT+CGG + chr2_1:20791936-20791955 None:intergenic 35.0%
TTATTGCGATTTCATTCGGT+AGG - chr2_1:20792053-20792072 Msa0200580:three_prime_UTR 35.0%
CAATTTCATTCAGTTGGAGT+TGG - chr2_1:20792196-20792215 Msa0200580:three_prime_UTR 35.0%
ATTTAGGAACAATTAGGGGT+TGG - chr2_1:20792318-20792337 Msa0200580:CDS 35.0%
TTTAGGAACAATTAGGGGTT+GGG - chr2_1:20792319-20792338 Msa0200580:intron 35.0%
!! CTATTGATTTAGAGCAAGGA+TGG - chr2_1:20792569-20792588 Msa0200580:CDS 35.0%
ACAGAAGCTGAAGAATATTC+TGG - chr2_1:20792612-20792631 Msa0200580:intron 35.0%
AAGCTGAAGAATATTCTGGA+AGG - chr2_1:20792616-20792635 Msa0200580:intron 35.0%
! AGCTGAAGAATATTCTGGAA+GGG - chr2_1:20792617-20792636 Msa0200580:intron 35.0%
TGTAGTCATTTGATCCGTAA+TGG - chr2_1:20792957-20792976 Msa0200580:intron 35.0%
TTGATCAAAGGACACCATTA+CGG + chr2_1:20792974-20792993 None:intergenic 35.0%
! GCTTGATTGTTGTTGTTGTT+TGG - chr2_1:20793022-20793041 Msa0200580:intron 35.0%
ATATCATGTCATAGGTCACA+AGG + chr2_1:20793227-20793246 None:intergenic 35.0%
CGTCATTGATATCATGTCAT+AGG + chr2_1:20793235-20793254 None:intergenic 35.0%
GAGGACTACTTATAAGAACT+AGG + chr2_1:20793328-20793347 None:intergenic 35.0%
CTATAATTATCTAGTCCACG+TGG + chr2_1:20793381-20793400 None:intergenic 35.0%
! ATGTTATGTGGTTAGTTGTG+TGG + chr2_1:20793446-20793465 None:intergenic 35.0%
ACACAACTAACCACATAACA+TGG - chr2_1:20793445-20793464 Msa0200580:CDS 35.0%
AAATGTCTGACCATGTTATG+TGG + chr2_1:20793458-20793477 None:intergenic 35.0%
TGGTTGTTTGTTCTTGTCTA+TGG + chr2_1:20793534-20793553 None:intergenic 35.0%
ACCATACACCATGTAACATT+TGG - chr2_1:20793550-20793569 Msa0200580:intron 35.0%
CCATACACCATGTAACATTT+GGG - chr2_1:20793551-20793570 Msa0200580:intron 35.0%
CATACACCATGTAACATTTG+GGG - chr2_1:20793552-20793571 Msa0200580:intron 35.0%
! CTTTTTCCCCAAATGTTACA+TGG + chr2_1:20793561-20793580 None:intergenic 35.0%
!! GAAAGTAGTTGGTAGCAAAA+AGG + chr2_1:20793624-20793643 None:intergenic 35.0%
TAGCTGCCATTAACAATATC+TGG - chr2_1:20793891-20793910 Msa0200580:intron 35.0%
ACCTCACCAGATATTGTTAA+TGG + chr2_1:20793900-20793919 None:intergenic 35.0%
AAATTATTGGGATCGTGAGT+TGG - chr2_1:20793953-20793972 Msa0200580:intron 35.0%
! CACGGGATTATTTCTTAATC+TGG - chr2_1:20793980-20793999 Msa0200580:intron 35.0%
AACAGAGAAACTAAGGGAAA+GGG + chr2_1:20794199-20794218 None:intergenic 35.0%
AAACAGAGAAACTAAGGGAA+AGG + chr2_1:20794200-20794219 None:intergenic 35.0%
GCAAGAAACAGAGAAACTAA+GGG + chr2_1:20794205-20794224 None:intergenic 35.0%
TGCAAGAAACAGAGAAACTA+AGG + chr2_1:20794206-20794225 None:intergenic 35.0%
GGATGAAGTAACTAAAACAG+AGG + chr2_1:20794236-20794255 None:intergenic 35.0%
TCATGAAGAACATGAAACAG+AGG + chr2_1:20794327-20794346 None:intergenic 35.0%
ATAGTAACTACGAATCTCTG+TGG - chr2_1:20794625-20794644 Msa0200580:intron 35.0%
TAGTAACTACGAATCTCTGT+GGG - chr2_1:20794626-20794645 Msa0200580:intron 35.0%
! GATTTAAGACAGAATTGGGA+AGG + chr2_1:20794673-20794692 None:intergenic 35.0%
!! TGAGACTGATTTGAATTTGC+TGG - chr2_1:20794792-20794811 Msa0200580:intron 35.0%
!! CTGATTTGAATTTGCTGGAA+AGG - chr2_1:20794797-20794816 Msa0200580:intron 35.0%
!! TTTGAATTTGCTGGAAAGGA+TGG - chr2_1:20794801-20794820 Msa0200580:intron 35.0%
!! GTCAAGCAGATTTTGCTTTT+AGG + chr2_1:20794952-20794971 None:intergenic 35.0%
TCATGTGGCTCATTTAATTG+AGG - chr2_1:20795063-20795082 Msa0200580:intron 35.0%
! CATTTAATTGAGGTGTCATG+TGG - chr2_1:20795073-20795092 Msa0200580:intron 35.0%
!!! AAATTCACTTTTTGGGCTTC+AGG - chr2_1:20795204-20795223 Msa0200580:intron 35.0%
! GCCATCTAACCATGATTTTA+TGG + chr2_1:20795297-20795316 None:intergenic 35.0%
TGGATCGATACTTTATTGCT+CGG - chr2_1:20795338-20795357 Msa0200580:intron 35.0%
CATTTACTTCCTTGTAAACC+TGG + chr2_1:20795515-20795534 None:intergenic 35.0%
CAGGTTTACAAGGAAGTAAA+TGG - chr2_1:20795513-20795532 Msa0200580:intron 35.0%
AAGATTGATCAAGAACGTGA+AGG - chr2_1:20795642-20795661 Msa0200580:intron 35.0%
TATTTGTGGAGATTGGAATG+GGG - chr2_1:20795706-20795725 Msa0200580:intron 35.0%
AATCAGGACAAGAATCTTCT+AGG + chr2_1:20795818-20795837 None:intergenic 35.0%
TTGTCCTGATTATATGCTCA+AGG - chr2_1:20795827-20795846 Msa0200580:intron 35.0%
!!! ACAGTTTTAGACCAAATAGC+TGG + chr2_1:20796022-20796041 None:intergenic 35.0%
TGCATTACTTAGAGATGACA+AGG - chr2_1:20796239-20796258 Msa0200580:CDS 35.0%
ACAGCTTCCTTTAAATGCTT+AGG - chr2_1:20796324-20796343 Msa0200580:intron 35.0%
!! TTCTAAAATACCCAAAGGCT+TGG - chr2_1:20796378-20796397 Msa0200580:intron 35.0%
CACAACCTGCTTAAATATAC+TGG + chr2_1:20796413-20796432 None:intergenic 35.0%
ATTTCTCCTTTCATTCCTGA+TGG - chr2_1:20796493-20796512 Msa0200580:intron 35.0%
!! TTGTCCTTATTTCTGGTTGA+GGG - chr2_1:20796632-20796651 Msa0200580:intron 35.0%
TAACACAAATTTGAACAGGC+GGG + chr2_1:20796717-20796736 None:intergenic 35.0%
GTAACACAAATTTGAACAGG+CGG + chr2_1:20796718-20796737 None:intergenic 35.0%
GTAAATAAGTCAAACTCGTG+TGG + chr2_1:20796978-20796997 None:intergenic 35.0%
ATTGTATAAGACGAGATCTC+AGG + chr2_1:20797297-20797316 None:intergenic 35.0%
TATACAATCCCAGAAGTTAC+TGG - chr2_1:20797309-20797328 Msa0200580:CDS 35.0%
TATAAACATAAACTGTGGGG+GGG + chr2_1:20797388-20797407 None:intergenic 35.0%
ACAAAATCAAACGGAAGAGT+GGG + chr2_1:20797483-20797502 None:intergenic 35.0%
CCAATCTCAGTTTCCATAAA+TGG + chr2_1:20797659-20797678 None:intergenic 35.0%
CCATTTATGGAAACTGAGAT+TGG - chr2_1:20797656-20797675 Msa0200580:intron 35.0%
TGTGGAATAGAGTATGATTC+TGG + chr2_1:20797757-20797776 None:intergenic 35.0%
GAATCATACTCTATTCCACA+AGG - chr2_1:20797757-20797776 Msa0200580:intron 35.0%
!! AACTAACGGGTTTATAAGCA+AGG + chr2_1:20798288-20798307 None:intergenic 35.0%
!!! TTTTTTTCCACGCATGTTAC+TGG - chr2_1:20798400-20798419 Msa0200580:intron 35.0%
GATATTAAAAGAGAGAGCGA+TGG - chr2_1:20798478-20798497 Msa0200580:intron 35.0%
GCGATGGTATATTGAGAAAA+TGG - chr2_1:20798494-20798513 Msa0200580:intron 35.0%
GTTCTGTTAATATAAGGTCC+AGG - chr2_1:20798684-20798703 Msa0200580:intron 35.0%
CAAAAGCTTCACTTCAATGA+TGG + chr2_1:20798841-20798860 None:intergenic 35.0%
! TCATTGAAGTGAAGCTTTTG+TGG - chr2_1:20798841-20798860 Msa0200580:intron 35.0%
AGTGAGTTCCATTAGGAAAA+CGG + chr2_1:20798893-20798912 None:intergenic 35.0%
AAATTGAAGCAACAATGTGG+TGG - chr2_1:20799028-20799047 Msa0200580:intron 35.0%
TACTTCAAAGATGGAAGGAA+TGG - chr2_1:20799057-20799076 Msa0200580:intron 35.0%
AATAATCCTAATGTAGACCC+CGG - chr2_1:20799236-20799255 Msa0200580:intron 35.0%
AGTAACTGTCAAGTCAATTC+CGG + chr2_1:20799258-20799277 None:intergenic 35.0%
CTAAGCACAGAAAACTTACT+TGG - chr2_1:20799490-20799509 Msa0200580:intron 35.0%
! ACAATCAGTTCCATGGTTTT+TGG + chr2_1:20799558-20799577 None:intergenic 35.0%
AAAAGCAAAACACAACATCC+GGG + chr2_1:20799700-20799719 None:intergenic 35.0%
AGAATAACTCAGTCTATCTG+AGG + chr2_1:20799754-20799773 None:intergenic 35.0%
TATGAGTCAGTCTAACTCAA+GGG + chr2_1:20800023-20800042 None:intergenic 35.0%
TTATGAGTCAGTCTAACTCA+AGG + chr2_1:20800024-20800043 None:intergenic 35.0%
!!! ACTTTTTTCTTCTCATCCAC+AGG + chr2_1:20800071-20800090 None:intergenic 35.0%
AGTTATTGAGGATGTTGACA+AGG - chr2_1:20800088-20800107 Msa0200580:exon 35.0%
CTTCATAATACGCACAATTG+AGG + chr2_1:20800135-20800154 None:intergenic 35.0%
TTGTGCGTATTATGAAGAGT+CGG - chr2_1:20800138-20800157 Msa0200580:intron 35.0%
TTCTTAATTGCCTTGACATC+AGG + chr2_1:20800316-20800335 None:intergenic 35.0%
ATGTCAAGGCAATTAAGAAG+CGG - chr2_1:20800317-20800336 Msa0200580:intron 35.0%
CATTATCTTTGTCTCTTTCC+AGG + chr2_1:20800369-20800388 None:intergenic 35.0%
ATAGCAAAACAAGATGAGGA+TGG - chr2_1:20800455-20800474 Msa0200580:intron 35.0%
GTTACTCTCAATTTCCTTGA+AGG - chr2_1:20800500-20800519 Msa0200580:intron 35.0%
CTGTAAATGTTTGCTCATGT+TGG - chr2_1:20800578-20800597 Msa0200580:intron 35.0%
ATGTTTGCTCATGTTGGAAA+AGG - chr2_1:20800584-20800603 Msa0200580:intron 35.0%
!! CAAAAAGGAAAGTACCATCT+AGG + chr2_1:20800636-20800655 None:intergenic 35.0%
! CTAGATGGTACTTTCCTTTT+TGG - chr2_1:20800634-20800653 Msa0200580:intron 35.0%
CGCAATTCCTATTTCCAATA+TGG + chr2_1:20800727-20800746 None:intergenic 35.0%
AACCATAAAATGAGTGGGTA+TGG - chr2_1:20800791-20800810 Msa0200580:five_prime_UTR 35.0%
CTTCACCGAAACCTTTATCA+GGG - chr2_1:20791876-20791895 Msa0200580:three_prime_UTR 40.0%
GCACGATTCTTTACCGAAAA+AGG - chr2_1:20791920-20791939 Msa0200580:three_prime_UTR 40.0%
!! GATTTAGTTTGGGGGGATTA+GGG - chr2_1:20792156-20792175 Msa0200580:three_prime_UTR 40.0%
TTAGGAACAATTAGGGGTTG+GGG - chr2_1:20792320-20792339 Msa0200580:intron 40.0%
!! AGAGTTTGCTGTTAAGGCTA+GGG - chr2_1:20792523-20792542 Msa0200580:CDS 40.0%
AGGGATTATCGATGAGTGAA+CGG - chr2_1:20792542-20792561 Msa0200580:CDS 40.0%
! AGGATGGGATTTTATGCTGA+AGG - chr2_1:20792585-20792604 Msa0200580:intron 40.0%
! GGATGGGATTTTATGCTGAA+GGG - chr2_1:20792586-20792605 Msa0200580:intron 40.0%
GTACTTATCATACAGCGGTT+GGG + chr2_1:20792825-20792844 None:intergenic 40.0%
TGTACTTATCATACAGCGGT+TGG + chr2_1:20792826-20792845 None:intergenic 40.0%
AACCGCTGTATGATAAGTAC+AGG - chr2_1:20792825-20792844 Msa0200580:CDS 40.0%
ACCGCTGTATGATAAGTACA+GGG - chr2_1:20792826-20792845 Msa0200580:CDS 40.0%
TCCCTGTACTTATCATACAG+CGG + chr2_1:20792830-20792849 None:intergenic 40.0%
!! CATTATAGGGCTATTGGCTT+AGG - chr2_1:20793155-20793174 Msa0200580:CDS 40.0%
TAATTATCTAGTCCACGTGG+AGG + chr2_1:20793378-20793397 None:intergenic 40.0%
CCCAAATGTTACATGGTGTA+TGG + chr2_1:20793554-20793573 None:intergenic 40.0%
CTCAGATCTTGTCTATGGTT+TGG + chr2_1:20793596-20793615 None:intergenic 40.0%
GTACACTCAGATCTTGTCTA+TGG + chr2_1:20793601-20793620 None:intergenic 40.0%
GGACTGATTGAGAAAGTAGT+TGG + chr2_1:20793635-20793654 None:intergenic 40.0%
AACACCCACTAAACACCTTT+GGG - chr2_1:20793698-20793717 Msa0200580:intron 40.0%
!! CAATCCCAAAGGTGTTTAGT+GGG + chr2_1:20793705-20793724 None:intergenic 40.0%
!! GAGATCAGTTTTGTCAATCG+CGG - chr2_1:20793733-20793752 Msa0200580:intron 40.0%
TTGTCAAATAGCCGCTATAG+TGG + chr2_1:20793812-20793831 None:intergenic 40.0%
GACAAACCACTATTGTTCCA+CGG + chr2_1:20793856-20793875 None:intergenic 40.0%
GCCATTAACAATATCTGGTG+AGG - chr2_1:20793896-20793915 Msa0200580:intron 40.0%
AAAAAAAAATACCGGGCGTG+TGG - chr2_1:20793928-20793947 Msa0200580:intron 40.0%
! CAATAATTTTTCCACACGCC+CGG + chr2_1:20793942-20793961 None:intergenic 40.0%
GGGCGTGTGGAAAAATTATT+GGG - chr2_1:20793941-20793960 Msa0200580:intron 40.0%
ACAGAGAAACTAAGGGAAAG+GGG + chr2_1:20794198-20794217 None:intergenic 40.0%
GGAATCAAAATGATCAGCCA+AGG - chr2_1:20794589-20794608 Msa0200580:intron 40.0%
CTATAGAGTAAAGACAGCCT+TGG + chr2_1:20794609-20794628 None:intergenic 40.0%
!! GATTTATTTTTCTTGGGGGG+TGG - chr2_1:20795026-20795045 Msa0200580:intron 40.0%
TTATGTTGCGAGAACTTGTG+AGG - chr2_1:20795260-20795279 Msa0200580:intron 40.0%
! GTGGGCTAACCATAAAATCA+TGG - chr2_1:20795285-20795304 Msa0200580:intron 40.0%
ATCGATACTTTATTGCTCGG+AGG - chr2_1:20795341-20795360 Msa0200580:intron 40.0%
TTCCTCCGCTTAATGAAGTT+GGG - chr2_1:20795368-20795387 Msa0200580:intron 40.0%
ATTCTCGAAAGGCTTCAAAC+TGG - chr2_1:20795790-20795809 Msa0200580:intron 40.0%
! CTCAAGGTATTATTCCTTCG+TGG - chr2_1:20795843-20795862 Msa0200580:intron 40.0%
TGGAAATGAAGAAACCACGA+AGG + chr2_1:20795860-20795879 None:intergenic 40.0%
ATTGTGGCATTCATTACAGG+CGG - chr2_1:20795903-20795922 Msa0200580:intron 40.0%
CTTGAAACGGGAGAAAGATA+GGG - chr2_1:20795933-20795952 Msa0200580:intron 40.0%
!! CTTAGGTTGAAGACTTGTCA+AGG - chr2_1:20796341-20796360 Msa0200580:intron 40.0%
GACAAACCATCAGGAATGAA+AGG + chr2_1:20796502-20796521 None:intergenic 40.0%
CATCACATAGACAAACCATC+AGG + chr2_1:20796511-20796530 None:intergenic 40.0%
TTCGGTAACATGCTGCATAT+AGG + chr2_1:20796542-20796561 None:intergenic 40.0%
AGATGCAGCAAGTAACAAGA+AGG - chr2_1:20796591-20796610 Msa0200580:intron 40.0%
!! GTTGTCCTTATTTCTGGTTG+AGG - chr2_1:20796631-20796650 Msa0200580:intron 40.0%
!! TGTCCTTATTTCTGGTTGAG+GGG - chr2_1:20796633-20796652 Msa0200580:intron 40.0%
TAACCCCTCAACCAGAAATA+AGG + chr2_1:20796639-20796658 None:intergenic 40.0%
TAACGTGCTACATGACATGA+TGG - chr2_1:20797037-20797056 Msa0200580:intron 40.0%
!! GACATGATGGACAAACAATC+TGG - chr2_1:20797050-20797069 Msa0200580:intron 40.0%
GTCTTTGTCCAGTAACTTCT+GGG + chr2_1:20797320-20797339 None:intergenic 40.0%
TGTCTTTGTCCAGTAACTTC+TGG + chr2_1:20797321-20797340 None:intergenic 40.0%
!! TTGACTTTTTGAGCCAACGA+TGG - chr2_1:20797345-20797364 Msa0200580:CDS 40.0%
GATAACTACTAGTCCATCGT+TGG + chr2_1:20797361-20797380 None:intergenic 40.0%
ATAAACATAAACTGTGGGGG+GGG + chr2_1:20797387-20797406 None:intergenic 40.0%
CACAAAATCAAACGGAAGAG+TGG + chr2_1:20797484-20797503 None:intergenic 40.0%
! CCAACAATATCCCTTTTCTC+CGG + chr2_1:20797573-20797592 None:intergenic 40.0%
CGGAGAAAAGGGATATTGTT+GGG - chr2_1:20797571-20797590 Msa0200580:intron 40.0%
TATTGTTGGGTTACAAGAGC+AGG - chr2_1:20797584-20797603 Msa0200580:intron 40.0%
!! TGAGATTGGTCTCTTTCTTC+AGG - chr2_1:20797670-20797689 Msa0200580:intron 40.0%
TATCCTATAGGCTCTTAAGG+AGG - chr2_1:20797841-20797860 Msa0200580:intron 40.0%
ACAAAATGTGGCAAGCAGTT+CGG + chr2_1:20797912-20797931 None:intergenic 40.0%
TAGAATGTGTCAGACCCAAT+TGG - chr2_1:20798177-20798196 Msa0200580:intron 40.0%
GACTTTAGTGGTCTAAGCTT+GGG - chr2_1:20798218-20798237 Msa0200580:intron 40.0%
ACTTTAGTGGTCTAAGCTTG+GGG - chr2_1:20798219-20798238 Msa0200580:intron 40.0%
!! TAACGGGTTTATAAGCAAGG+TGG + chr2_1:20798285-20798304 None:intergenic 40.0%
ATGAAAAAAGATCTTGGGGG+AGG + chr2_1:20798348-20798367 None:intergenic 40.0%
CCAAAAAGGACAAAGCCAAA+GGG + chr2_1:20798720-20798739 None:intergenic 40.0%
!!! CCTTTGGCTTTGTCCTTTTT+GGG - chr2_1:20798718-20798737 Msa0200580:intron 40.0%
!!! GCTTTGTCCTTTTTGGGTTT+CGG - chr2_1:20798724-20798743 Msa0200580:intron 40.0%
GGCACAGTCAATGATACATT+TGG - chr2_1:20798812-20798831 Msa0200580:intron 40.0%
! AGTTAACCCCGTTTTCCTAA+TGG - chr2_1:20798882-20798901 Msa0200580:intron 40.0%
TGAGTTCCATTAGGAAAACG+GGG + chr2_1:20798891-20798910 None:intergenic 40.0%
GTGAGTTCCATTAGGAAAAC+GGG + chr2_1:20798892-20798911 None:intergenic 40.0%
! AGGAATGGTCAGTCTTTTCA+AGG - chr2_1:20799072-20799091 Msa0200580:intron 40.0%
!! GTCTTTTCAAGGCTTTGTGA+TGG - chr2_1:20799083-20799102 Msa0200580:intron 40.0%
TCAGGTTACAGATTTGACAC+TGG - chr2_1:20799175-20799194 Msa0200580:intron 40.0%
TACAGATTTGACACTGGCAA+AGG - chr2_1:20799181-20799200 Msa0200580:intron 40.0%
TAACTGTCAAGTCAATTCCG+GGG + chr2_1:20799256-20799275 None:intergenic 40.0%
GTAACTGTCAAGTCAATTCC+GGG + chr2_1:20799257-20799276 None:intergenic 40.0%
ACTTATATTGCAGGTACCCA+AGG + chr2_1:20799523-20799542 None:intergenic 40.0%
TTGGGTACCTGCAATATAAG+TGG - chr2_1:20799522-20799541 Msa0200580:intron 40.0%
TGGGTACCTGCAATATAAGT+GGG - chr2_1:20799523-20799542 Msa0200580:intron 40.0%
AGTAGTCACAATCAGTTCCA+TGG + chr2_1:20799565-20799584 None:intergenic 40.0%
ACTGATTGTGACTACTTACC+AGG - chr2_1:20799569-20799588 Msa0200580:intron 40.0%
CTTGTACTTGGCACATGATA+AGG + chr2_1:20799832-20799851 None:intergenic 40.0%
GGTAATATTGCTTTCGTGCT+TGG + chr2_1:20799870-20799889 None:intergenic 40.0%
AGACAAAATGAGGAGGATCA+AGG - chr2_1:20799923-20799942 Msa0200580:intron 40.0%
! TTTTTCTTCTCATCCACAGG+AGG + chr2_1:20800068-20800087 None:intergenic 40.0%
GCAGATAGCAAAACAAGATG+AGG - chr2_1:20800451-20800470 Msa0200580:intron 40.0%
CTCTCAATTTCCTTGAAGGA+AGG - chr2_1:20800504-20800523 Msa0200580:intron 40.0%
ACTTATAGCTCCTTCCTTCA+AGG + chr2_1:20800517-20800536 None:intergenic 40.0%
AAGTCATCAGATGTGAATGC+AGG + chr2_1:20800670-20800689 None:intergenic 40.0%
GGGGTGGGAGAAATAATTAA+TGG + chr2_1:20800706-20800725 None:intergenic 40.0%
! TTATTTCTCCCACCCCATAT+TGG - chr2_1:20800710-20800729 Msa0200580:five_prime_UTR 40.0%
TCCTATTTCCAATATGGGGT+GGG + chr2_1:20800721-20800740 None:intergenic 40.0%
TTCCTATTTCCAATATGGGG+TGG + chr2_1:20800722-20800741 None:intergenic 40.0%
! TGCCATACCCACTCATTTTA+TGG + chr2_1:20800796-20800815 None:intergenic 40.0%
GAATCGAAACCTCACTTCTA+TGG - chr2_1:20800819-20800838 Msa0200580:five_prime_UTR 40.0%
CCTGATAAAGGTTTCGGTGA+AGG + chr2_1:20791878-20791897 None:intergenic 45.0%
CCTTCACCGAAACCTTTATC+AGG - chr2_1:20791875-20791894 Msa0200580:three_prime_UTR 45.0%
TAAAGAATCGTGCGCGATGA+TGG + chr2_1:20791913-20791932 None:intergenic 45.0%
!! TAGGGTTTAGTTTGGGGACT+AGG - chr2_1:20792018-20792037 Msa0200580:three_prime_UTR 45.0%
!! AGGGTTTAGTTTGGGGACTA+GGG - chr2_1:20792019-20792038 Msa0200580:three_prime_UTR 45.0%
!! GGATTTAGTTTGGGGGGATT+AGG - chr2_1:20792155-20792174 Msa0200580:three_prime_UTR 45.0%
TAGGAACAATTAGGGGTTGG+GGG - chr2_1:20792321-20792340 Msa0200580:intron 45.0%
!! GGTTGCAGAGTTTGCTGTTA+AGG - chr2_1:20792517-20792536 Msa0200580:CDS 45.0%
!! CAGAGTTTGCTGTTAAGGCT+AGG - chr2_1:20792522-20792541 Msa0200580:CDS 45.0%
!!! TGGGTTTTGTTTGAGCTCTG+AGG - chr2_1:20792723-20792742 Msa0200580:CDS 45.0%
GGTTGGGAATAGTCATTTGG+AGG + chr2_1:20792809-20792828 None:intergenic 45.0%
AGCGGTTGGGAATAGTCATT+TGG + chr2_1:20792812-20792831 None:intergenic 45.0%
GCTGTATGATAAGTACAGGG+AGG - chr2_1:20792829-20792848 Msa0200580:CDS 45.0%
!! TAAGTACAGGGAGGCATTTG+AGG - chr2_1:20792838-20792857 Msa0200580:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_1:20793006-20793025 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_1:20793007-20793026 None:intergenic 45.0%
! TCAAGCCTTATCCCACTAAG+TGG + chr2_1:20793008-20793027 None:intergenic 45.0%
CTATGGAAGACATGAGACAC+TGG + chr2_1:20793517-20793536 None:intergenic 45.0%
!! CAAAGGTGTTTAGTGGGTGT+TGG + chr2_1:20793699-20793718 None:intergenic 45.0%
CAACACCCACTAAACACCTT+TGG - chr2_1:20793697-20793716 Msa0200580:intron 45.0%
!! CCAATCCCAAAGGTGTTTAG+TGG + chr2_1:20793706-20793725 None:intergenic 45.0%
!! CCACTAAACACCTTTGGGAT+TGG - chr2_1:20793703-20793722 Msa0200580:intron 45.0%
TCGCGGATAGCTGAAAATAG+TGG - chr2_1:20793750-20793769 Msa0200580:intron 45.0%
CGCGGATAGCTGAAAATAGT+GGG - chr2_1:20793751-20793770 Msa0200580:intron 45.0%
GTGCTATAGCACCACTATAG+CGG - chr2_1:20793798-20793817 Msa0200580:intron 45.0%
TTGTACTAAATAGCGTGCCG+TGG - chr2_1:20793836-20793855 Msa0200580:intron 45.0%
GCAGCTATAGTAGCCGAATT+TGG + chr2_1:20793878-20793897 None:intergenic 45.0%
CGGGCGTGTGGAAAAATTAT+TGG - chr2_1:20793940-20793959 Msa0200580:intron 45.0%
AAATTGAAGCAGCTTGGACC+AGG - chr2_1:20794042-20794061 Msa0200580:intron 45.0%
AGCTGAAAGATCGTAACTCG+AGG + chr2_1:20794518-20794537 None:intergenic 45.0%
TCGAGTTACGATCTTTCAGC+TGG - chr2_1:20794517-20794536 Msa0200580:CDS 45.0%
! AAGGAGAGTCGGAGTCTTTT+GGG + chr2_1:20794654-20794673 None:intergenic 45.0%
ACAGAATTGGGAAGGAGAGT+CGG + chr2_1:20794665-20794684 None:intergenic 45.0%
!! GACTGGTCTGTGTCTCTTAA+AGG - chr2_1:20794907-20794926 Msa0200580:CDS 45.0%
TCGTGCTTCTCTCTCAAAGA+AGG + chr2_1:20795235-20795254 None:intergenic 45.0%
CTTCCTCCGCTTAATGAAGT+TGG - chr2_1:20795367-20795386 Msa0200580:intron 45.0%
GTCAGCCCAACTTCATTAAG+CGG + chr2_1:20795376-20795395 None:intergenic 45.0%
!! GCTGACTTGCTTTCGTGATT+TGG - chr2_1:20795390-20795409 Msa0200580:intron 45.0%
!! TGCAGAAGTGTCTTTGAGCA+TGG + chr2_1:20795766-20795785 None:intergenic 45.0%
GCTTGAAACGGGAGAAAGAT+AGG - chr2_1:20795932-20795951 Msa0200580:intron 45.0%
TAGCGAGCCCAAGTTATTAG+AGG - chr2_1:20795978-20795997 Msa0200580:intron 45.0%
GAAACAGGATCCAAGCCTTT+GGG + chr2_1:20796391-20796410 None:intergenic 45.0%
ATGCAGCATGTTACCGAAGA+AGG - chr2_1:20796544-20796563 Msa0200580:intron 45.0%
! TACCGAAGAAGGTACAACGT+TGG - chr2_1:20796555-20796574 Msa0200580:intron 45.0%
CACCAACGTTGTACCTTCTT+CGG + chr2_1:20796560-20796579 None:intergenic 45.0%
! AGGTACAACGTTGGTGAAGT+TGG - chr2_1:20796564-20796583 Msa0200580:intron 45.0%
! GGCTTCAATGCCGATTATTG+CGG + chr2_1:20796696-20796715 None:intergenic 45.0%
TCAAACTCGTGTGGCTCAAA+TGG + chr2_1:20796969-20796988 None:intergenic 45.0%
GACTCGTTGTGCTCATCAAA+AGG - chr2_1:20797268-20797287 Msa0200580:CDS 45.0%
TAAACATAAACTGTGGGGGG+GGG + chr2_1:20797386-20797405 None:intergenic 45.0%
AGGTCGTACACGTTCCTTAT+CGG - chr2_1:20797410-20797429 Msa0200580:intron 45.0%
CCGGAGAAAAGGGATATTGT+TGG - chr2_1:20797570-20797589 Msa0200580:intron 45.0%
AACAGTCGTTCACATATGCC+AGG + chr2_1:20797733-20797752 None:intergenic 45.0%
AAGCCTCCTTAAGAGCCTAT+AGG + chr2_1:20797847-20797866 None:intergenic 45.0%
!!! TTTTGCAACAAGGGTGTTGC+TGG - chr2_1:20797875-20797894 Msa0200580:intron 45.0%
AATGTGTCAGACCCAATTGG+AGG - chr2_1:20798180-20798199 Msa0200580:intron 45.0%
!! GCGTGCATAATGGACTTTAG+TGG - chr2_1:20798206-20798225 Msa0200580:intron 45.0%
GGACTTTAGTGGTCTAAGCT+TGG - chr2_1:20798217-20798236 Msa0200580:intron 45.0%
CTTTAGTGGTCTAAGCTTGG+GGG - chr2_1:20798220-20798239 Msa0200580:intron 45.0%
TTTAGTGGTCTAAGCTTGGG+GGG - chr2_1:20798221-20798240 Msa0200580:intron 45.0%
AAGGTGGAGTGAAGTCCAAA+TGG + chr2_1:20798269-20798288 None:intergenic 45.0%
! CCAAAGGGATTTGGTATTCC+TGG + chr2_1:20798705-20798724 None:intergenic 45.0%
CCAGGAATACCAAATCCCTT+TGG - chr2_1:20798702-20798721 Msa0200580:intron 45.0%
AGGACAAAGCCAAAGGGATT+TGG + chr2_1:20798714-20798733 None:intergenic 45.0%
!!! CCCTTTGGCTTTGTCCTTTT+TGG - chr2_1:20798717-20798736 Msa0200580:intron 45.0%
CCCAAAAAGGACAAAGCCAA+AGG + chr2_1:20798721-20798740 None:intergenic 45.0%
! CTTGCAGGAAAAAGCTTGCT+CGG - chr2_1:20798951-20798970 Msa0200580:intron 45.0%
ACTCCTCTCATGGTCATCAT+TGG + chr2_1:20798999-20799018 None:intergenic 45.0%
GGAGAACCAAACAAGCTTTG+AGG - chr2_1:20799202-20799221 Msa0200580:intron 45.0%
TCAATTCCGGGGTCTACATT+AGG + chr2_1:20799245-20799264 None:intergenic 45.0%
ACAGTTACTGTTCTGACCAC+TGG - chr2_1:20799269-20799288 Msa0200580:intron 45.0%
CCATTTCTGCAGGAAGATTG+AGG + chr2_1:20799322-20799341 None:intergenic 45.0%
CCTCAATCTTCCTGCAGAAA+TGG - chr2_1:20799319-20799338 Msa0200580:intron 45.0%
GCGTATTATGAAGAGTCGGA+AGG - chr2_1:20800142-20800161 Msa0200580:intron 45.0%
TCCCACCCCATATTGGAAAT+AGG - chr2_1:20800717-20800736 Msa0200580:five_prime_UTR 45.0%
!! TAATAAGAAAAAAATAAAAA+AGG + chr2_1:20791794-20791813 None:intergenic 5.0%
!! TAAAAAAAAAAAAAAAACAT+TGG + chr2_1:20795486-20795505 None:intergenic 5.0%
AACAATTAGGGGTTGGGGGA+AGG - chr2_1:20792325-20792344 Msa0200580:intron 50.0%
TCAGAGCTGAACTGAGGTTC+AGG + chr2_1:20792646-20792665 None:intergenic 50.0%
TGAACCTCAGTTCAGCTCTG+AGG - chr2_1:20792645-20792664 Msa0200580:intron 50.0%
TAGTCCTCAGAGCTGAACTG+AGG + chr2_1:20792652-20792671 None:intergenic 50.0%
GGGTCGGCTACATTGATCAA+AGG + chr2_1:20792986-20793005 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_1:20793002-20793021 None:intergenic 50.0%
TGGAACATTCAACCTCCACG+TGG - chr2_1:20793363-20793382 Msa0200580:CDS 50.0%
! TGTGGTTAGTTGTGTGGCTG+CGG + chr2_1:20793440-20793459 None:intergenic 50.0%
GAAGACATGAGACACTGGTC+TGG + chr2_1:20793512-20793531 None:intergenic 50.0%
CACAACTCGCAACAGACAAG+TGG + chr2_1:20793656-20793675 None:intergenic 50.0%
!! AACACCTTTGGGATTGGACG+TGG - chr2_1:20793709-20793728 Msa0200580:intron 50.0%
!! GGATCGTGAGTTGGTTTGCA+CGG - chr2_1:20793962-20793981 Msa0200580:intron 50.0%
!! GATCGTGAGTTGGTTTGCAC+GGG - chr2_1:20793963-20793982 Msa0200580:intron 50.0%
GTAACTCGAGGATCATAGCG+TGG + chr2_1:20794506-20794525 None:intergenic 50.0%
! GAAGGAGAGTCGGAGTCTTT+TGG + chr2_1:20794655-20794674 None:intergenic 50.0%
! ATTTTTCTTGGGGGGTGGAG+TGG - chr2_1:20795031-20795050 Msa0200580:intron 50.0%
!! GAGTGGTAAGAGGTGTCATG+TGG - chr2_1:20795048-20795067 Msa0200580:CDS 50.0%
TGTTGCGAGAACTTGTGAGG+AGG - chr2_1:20795263-20795282 Msa0200580:intron 50.0%
AGCCCAACTTCATTAAGCGG+AGG + chr2_1:20795373-20795392 None:intergenic 50.0%
GGAGATTGGAATGGGGCATA+TGG - chr2_1:20795713-20795732 Msa0200580:intron 50.0%
GGAAACAGGATCCAAGCCTT+TGG + chr2_1:20796392-20796411 None:intergenic 50.0%
AAACATAAACTGTGGGGGGG+GGG + chr2_1:20797385-20797404 None:intergenic 50.0%
AATGTCTGCAGCCGGAGAAA+AGG - chr2_1:20797559-20797578 Msa0200580:intron 50.0%
ATGTCTGCAGCCGGAGAAAA+GGG - chr2_1:20797560-20797579 Msa0200580:intron 50.0%
AGAGCTGCATGACAAGTACC+TGG - chr2_1:20797712-20797731 Msa0200580:intron 50.0%
ATGCACGCACACCTCCAATT+GGG + chr2_1:20798194-20798213 None:intergenic 50.0%
TATGCACGCACACCTCCAAT+TGG + chr2_1:20798195-20798214 None:intergenic 50.0%
! TTGGAGGTGTGCGTGCATAA+TGG - chr2_1:20798196-20798215 Msa0200580:intron 50.0%
CGACTTTCCAGTAACATGCG+TGG + chr2_1:20798410-20798429 None:intergenic 50.0%
!! GCTTTTTCCTGCAAGCAACC+AGG + chr2_1:20798946-20798965 None:intergenic 50.0%
GTGCCAATGATGACCATGAG+AGG - chr2_1:20798993-20799012 Msa0200580:intron 50.0%
!! CTGTTCTGACCACTGGTTTC+TGG - chr2_1:20799276-20799295 Msa0200580:intron 50.0%
GTAACTAGGCCAGAAACCAG+TGG + chr2_1:20799288-20799307 None:intergenic 50.0%
TTCTCATCCACAGGAGGAAG+AGG + chr2_1:20800062-20800081 None:intergenic 50.0%
CGCACTCCATCACTAACTGT+TGG + chr2_1:20800178-20800197 None:intergenic 50.0%
ATGGAGTGCGTTGAGCAGTT+AGG - chr2_1:20800188-20800207 Msa0200580:intron 50.0%
GCAGTTAGGCCGCATGTTTA+AGG - chr2_1:20800202-20800221 Msa0200580:intron 50.0%
CTTGATCTCTCGAGACTACC+TGG - chr2_1:20800348-20800367 Msa0200580:intron 50.0%
!! CTCCATATCCAAGTATCGGC+TGG - chr2_1:20800552-20800571 Msa0200580:intron 50.0%
AGCCAGCCGATACTTGGATA+TGG + chr2_1:20800557-20800576 None:intergenic 50.0%
TACAGTAGCCAGCCGATACT+TGG + chr2_1:20800563-20800582 None:intergenic 50.0%
AATTAGGGGTTGGGGGAAGG+AGG - chr2_1:20792328-20792347 Msa0200580:intron 55.0%
ATTAGGGGTTGGGGGAAGGA+GGG - chr2_1:20792329-20792348 Msa0200580:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_1:20792993-20793012 Msa0200580:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_1:20792994-20793013 Msa0200580:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_1:20793000-20793019 Msa0200580:intron 55.0%
CTCACCACGTCCAATCCCAA+AGG + chr2_1:20793716-20793735 None:intergenic 55.0%
AGCGTGCCGTGGAACAATAG+TGG - chr2_1:20793847-20793866 Msa0200580:intron 55.0%
TGCGAGAACTTGTGAGGAGG+TGG - chr2_1:20795266-20795285 Msa0200580:intron 55.0%
GCGAGAACTTGTGAGGAGGT+GGG - chr2_1:20795267-20795286 Msa0200580:intron 55.0%
GTGGCATTCATTACAGGCGG+AGG - chr2_1:20795906-20795925 Msa0200580:intron 55.0%
!! AGGCGGAGGAGTGCTTGAAA+CGG - chr2_1:20795920-20795939 Msa0200580:intron 55.0%
AACATAAACTGTGGGGGGGG+GGG + chr2_1:20797384-20797403 None:intergenic 55.0%
GTCTAAGCTTGGGGGGTTCA+TGG - chr2_1:20798228-20798247 Msa0200580:intron 55.0%
CATCTTGCCTGGTTGCTTGC+AGG - chr2_1:20798936-20798955 Msa0200580:intron 55.0%
! GCAGGAAAAAGCTTGCTCGG+AGG - chr2_1:20798954-20798973 Msa0200580:intron 55.0%
GCAGATTCCTCTTCCTCCTG+TGG - chr2_1:20800052-20800071 Msa0200580:CDS 55.0%
GTTTGCGCAGCCTGATGTCA+AGG - chr2_1:20800303-20800322 Msa0200580:intron 55.0%
CGCAACGCACCATAGAAGTG+AGG + chr2_1:20800831-20800850 None:intergenic 55.0%
TTGGGGGGTGGAGTGGTAAG+AGG - chr2_1:20795038-20795057 Msa0200580:intron 60.0%
!! GGCGGAGGAGTGCTTGAAAC+GGG - chr2_1:20795921-20795940 Msa0200580:intron 60.0%
TGGGCTCGCTACTAGAGTGC+AGG + chr2_1:20795969-20795988 None:intergenic 60.0%
ACATAAACTGTGGGGGGGGG+GGG + chr2_1:20797383-20797402 None:intergenic 60.0%
TCGCAGTTGCTGCCGGAGGA+GGG + chr2_1:20794171-20794190 None:intergenic 65.0%
!! TCGCAGTCGCGCTGGCTGAG+AGG + chr2_1:20794134-20794153 None:intergenic 70.0%
CCACCTCTCACGCCCTCCTC+CGG - chr2_1:20794156-20794175 Msa0200580:intron 70.0%
GTCGCAGTTGCTGCCGGAGG+AGG + chr2_1:20794172-20794191 None:intergenic 70.0%
AGCGTCGCAGTTGCTGCCGG+AGG + chr2_1:20794175-20794194 None:intergenic 70.0%
!! GGGAGCGTCGCAGTTGCTGC+CGG + chr2_1:20794178-20794197 None:intergenic 70.0%
AGGTGGCGTCGCAGTCGCGC+TGG + chr2_1:20794142-20794161 None:intergenic 75.0%
! CCGGAGGAGGGCGTGAGAGG+TGG + chr2_1:20794159-20794178 None:intergenic 75.0%
! CTGCCGGAGGAGGGCGTGAG+AGG + chr2_1:20794162-20794181 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 20791752 20800898 20791752 ID=Msa0200580;Name=Msa0200580
chr2_1 mRNA 20791752 20800898 20791752 ID=Msa0200580-mRNA-1;Parent=Msa0200580;Name=Msa0200580-mRNA-1;_AED=0.14;_eAED=0.14;_QI=219|1|1|1|0.94|0.9|20|484|742
chr2_1 exon 20791752 20792337 20791752 ID=Msa0200580-mRNA-1:exon:8540;Parent=Msa0200580-mRNA-1
chr2_1 exon 20792427 20792594 20792427 ID=Msa0200580-mRNA-1:exon:8539;Parent=Msa0200580-mRNA-1
chr2_1 exon 20792706 20792924 20792706 ID=Msa0200580-mRNA-1:exon:8538;Parent=Msa0200580-mRNA-1
chr2_1 exon 20793060 20793203 20793060 ID=Msa0200580-mRNA-1:exon:8537;Parent=Msa0200580-mRNA-1
chr2_1 exon 20793310 20793471 20793310 ID=Msa0200580-mRNA-1:exon:8536;Parent=Msa0200580-mRNA-1
chr2_1 exon 20793572 20793692 20793572 ID=Msa0200580-mRNA-1:exon:8535;Parent=Msa0200580-mRNA-1
chr2_1 exon 20794506 20794561 20794506 ID=Msa0200580-mRNA-1:exon:8534;Parent=Msa0200580-mRNA-1
chr2_1 exon 20794650 20794799 20794650 ID=Msa0200580-mRNA-1:exon:8533;Parent=Msa0200580-mRNA-1
chr2_1 exon 20794872 20794958 20794872 ID=Msa0200580-mRNA-1:exon:8532;Parent=Msa0200580-mRNA-1
chr2_1 exon 20795045 20795080 20795045 ID=Msa0200580-mRNA-1:exon:8531;Parent=Msa0200580-mRNA-1
chr2_1 exon 20796038 20796100 20796038 ID=Msa0200580-mRNA-1:exon:8530;Parent=Msa0200580-mRNA-1
chr2_1 exon 20796224 20796304 20796224 ID=Msa0200580-mRNA-1:exon:8529;Parent=Msa0200580-mRNA-1
chr2_1 exon 20796390 20796479 20796390 ID=Msa0200580-mRNA-1:exon:8528;Parent=Msa0200580-mRNA-1
chr2_1 exon 20796651 20796728 20796651 ID=Msa0200580-mRNA-1:exon:8527;Parent=Msa0200580-mRNA-1
chr2_1 exon 20796802 20797005 20796802 ID=Msa0200580-mRNA-1:exon:8526;Parent=Msa0200580-mRNA-1
chr2_1 exon 20797087 20797134 20797087 ID=Msa0200580-mRNA-1:exon:8525;Parent=Msa0200580-mRNA-1
chr2_1 exon 20797239 20797424 20797239 ID=Msa0200580-mRNA-1:exon:8524;Parent=Msa0200580-mRNA-1
chr2_1 exon 20799773 20799872 20799773 ID=Msa0200580-mRNA-1:exon:8523;Parent=Msa0200580-mRNA-1
chr2_1 exon 20799964 20800125 20799964 ID=Msa0200580-mRNA-1:exon:8522;Parent=Msa0200580-mRNA-1
chr2_1 exon 20800708 20800898 20800708 ID=Msa0200580-mRNA-1:exon:8521;Parent=Msa0200580-mRNA-1
chr2_1 five_prime_UTR 20800708 20800898 20800708 ID=Msa0200580-mRNA-1:five_prime_utr;Parent=Msa0200580-mRNA-1
chr2_1 five_prime_UTR 20800098 20800125 20800098 ID=Msa0200580-mRNA-1:five_prime_utr;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20799964 20800097 20799964 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20799773 20799872 20799773 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20797239 20797424 20797239 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20797087 20797134 20797087 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20796802 20797005 20796802 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20796651 20796728 20796651 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20796390 20796479 20796390 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20796224 20796304 20796224 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20796038 20796100 20796038 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20795045 20795080 20795045 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20794872 20794958 20794872 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20794650 20794799 20794650 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20794506 20794561 20794506 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20793572 20793692 20793572 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20793310 20793471 20793310 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20793060 20793203 20793060 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20792706 20792924 20792706 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20792427 20792594 20792427 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 CDS 20792236 20792337 20792236 ID=Msa0200580-mRNA-1:cds;Parent=Msa0200580-mRNA-1
chr2_1 three_prime_UTR 20791752 20792235 20791752 ID=Msa0200580-mRNA-1:three_prime_utr;Parent=Msa0200580-mRNA-1
Gene Sequence

>Msa0200580

ATGAGTGAACGGAAGACTATTGATTTAGAGCAAGGATGGGATTTTATGCTGAAGGGAATACAGAAGCTGAAGAATATTCTGGAAGGGTTACCTGAACCTCAGTTCAGCTCTGAGGACTATATGATGCTATACACAACTATATATAATATGTGTACTCAGAAGCCTCCAAATGACTATTCCCAACCGCTGTATGATAAGTACAGGGAGGCATTTGAGGAGTACATCTTATCAACTGTATTACCTTCTTTGAGAGAGAAGCACGATGAATTTATGTTGCGAGAACTTGTGAGGAGGTGGGCTAACCATAAAATCATGGTTAGATGGCTTTCTCGTTTCTTTCACTATTTGGATCGATACTTTATTGCTCGGAGGTCACTTCCTCCGCTTAATGAAGTTGGGCTGACTTGCTTTCGTGATTTGGTTTACAAGGAAGTAAATGGGAAAGTGAGAGATGCCGTGATTTCTCTTATTGATCAAGAACGTGAAGGAGAGCAGATCGATCGAGCTCTGATAAAAAATGTATTAGATATATTTGTGGAGATTGGAATGGGGCATATGGATCACTATGAAAATGATTTTGAAACTGCCATGCTCAAAGACACTTCTGCATATTATTCTCGAAAGGCTTCAAACTGGATCCTAGAAGATTCTTGTCCTGATTATATGCTCAAGGCGGAGGAGTGCTTGAAACGGGAGAAAGATAGGGTTGCTAATTACCTGCACTCTAGTAGCGAGCCCAAGTTATTAGAGAAAGTTCAACATGAGCTTTTATCTGTGTATGCAAACCAACTTCTTGAAAAAGAACATTCTGGATGTCATGCATTACTTAGAGATGACAAGGTTGAAGACTTGTCAAGGATGTTCAGACTCTTTTCTAAAATACCCAAAGGCTTGGATCCTGTTTCCAGTATATTTAAGCAGCATGTTACCGAAGAAGGTACAACGTTGGTGAAGTTGGCTGAAGATGCAGCAAGTAACAAGAAGCCGGAGAAAAGGGATATTGTTGGGTTACAAGAGCAGGTTTTTGTTCGAAAAGTGATAGAGCTGCATGACAAGTACCTGGCATATGTGAACGACTGTTTCCAGAATCATACTCTATTCCACAAGGCTCTTAAGGAGGCTTTTGAGATATTTTGCAACAAGGGTGTTGCTGGAAGCTCAAGTGCCGAACTGCTTGCCACATTTTGTGATAATATTCTCAAGAAAGGCGGAAGTGAAAAATTGAGTGATGAAGCAATTGAAGAAACACTTGAGAAGGTTGTCAAGCTACTTGCTTATATAAGTGACAAAGATTTGTTTGCCGAATTTTATAGGAAAAAGCTTGCTCGGAGGCTTCTTTTTGATAAGAGTGCCAATGATGACCATGAGAGGAGTATTTTAACAAAATTGAAGCAACAATGTGGTGGTCAATTTACTTCAAAGATGGAAGGAATGGTTACAGATTTGACACTGGCAAAGGAGAACCAAACAAGCTTTGAGGAATATTTAAAAAATAATCCTAATGTAGACCCCGGAATTGACTTGACAGTTACTGTTCTGACCACTGGTTTCTGGCCTAGTTACAAATCTTTTGACCTCAATCTTCCTGCAGAAATGGTTAAGTGTGTAGAAGTTTTCAAGGAGTTTTATCAAACTAAAACTAAGCACAGAAAACTTACTTGGATTTATTCCTTGGGTACCTGCAATATAAGTGGGAAATTTGAACCAAAAACCATGGAACTGATTGTGACTACTTACCAGGCTTCAGCATTGCTTCTTTTCAATTCCTCAGATAGACTGAGTTATTCTGAGATAATGGCTCAGTTGAACTTAAACGATGATGATGTTATTAGACTTCTTCACTCCTTATCATGTGCCAAGTACAAGATTCTTAACAAGGAACCAAGCACGAAAGCAATATTACCTACCGATTATTTTGAATTTAATTCAAAATTTACAGACAAAATGAGGAGGATCAAGATTCCTCTTCCTCCTGTGGATGAGAAGAAAAAAGTTATTGAGGATGTTGACAAGGACAGAAGATATGCTATTGATGCCTCAATTGTGCGTATTATGAAGAGTCGGAAGGTTCTAAATTACCAACAGTTAGTGATGGAGTGCGTTGAGCAGTTAGGCCGCATGTTTAAGCCTGATGTCAAGGCAATTAAGAAGCGGATTGAAGACTTGATCTCTCGAGACTACCTGGAAAGAGACAAAGATAATGCAAATTTGTTCAAGTACTTGGCTTGA
Protein sequence

>Msa0200580

MSERKTIDLEQGWDFMLKGIQKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPNDYSQPLYDKYREAFEEYILSTVLPSLREKHDEFMLRELVRRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDLVYKEVNGKVRDAVISLIDQEREGEQIDRALIKNVLDIFVEIGMGHMDHYENDFETAMLKDTSAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVANYLHSSSEPKLLEKVQHELLSVYANQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPKGLDPVSSIFKQHVTEEGTTLVKLAEDAASNKKPEKRDIVGLQEQVFVRKVIELHDKYLAYVNDCFQNHTLFHKALKEAFEIFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLKNNPNVDPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFKEFYQTKTKHRKLTWIYSLGTCNISGKFEPKTMELIVTTYQASALLLFNSSDRLSYSEIMAQLNLNDDDVIRLLHSLSCAKYKILNKEPSTKAILPTDYFEFNSKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLNYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKDNANLFKYLA*