AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0253010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0253010 MtrunA17_Chr2g0311901 82.383 193 27 2 77 264 30 220 1.70e-88 261
Msa0253010 MtrunA17_Chr2g0311901 52.976 168 58 5 1 157 33 190 6.53e-36 127
Msa0253010 MtrunA17_Chr2g0311901 68.182 88 28 0 1 88 113 200 2.13e-26 102
Msa0253010 MtrunA17_Chr2g0311911 89.744 78 8 0 1 78 33 110 1.13e-40 137
Msa0253010 MtrunA17_Chr2g0311911 65.957 94 31 1 160 253 31 123 1.31e-29 108
Msa0253010 MtrunA17_Chr2g0311911 56.989 93 38 1 119 209 30 122 3.11e-20 84.0
Msa0253010 MtrunA17_Chr2g0311911 55.263 76 34 0 77 152 30 105 1.99e-16 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 79 sgRNAs with CRISPR-Local

Find 614 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGACTGGGGTGGATCATTC+TGG 0.182069 2_2:-44620065 Msa0253010:CDS
GTGATTGGGGAGGCTCATTC+TGG 0.210600 2_2:-44619225 Msa0253010:CDS
GAGACTGGGCAGGCTCATTT+TGG 0.228502 2_2:-44619099 Msa0253010:CDS
AACCTTCTGTTACACTTTCA+TGG 0.231090 2_2:+44628428 None:intergenic
AGACTGGGGAGGCGCATTTC+CGG 0.252086 2_2:-44628527 Msa0253010:CDS
GAGATTGGGGAGGCTCATTC+TGG 0.253976 2_2:-44620296 Msa0253010:CDS
AACATTCTGGTACACTTTCA+TGG 0.317685 2_2:+44619125 None:intergenic
AACTGATGGTTGGCGTGATT+GGG 0.322774 2_2:-44619239 Msa0253010:CDS
TAACAGAAGGTTGGAGAGAC+TGG 0.323117 2_2:-44628417 Msa0253010:CDS
GGTAAAGGTGCAAAAGAAAA+AGG 0.335620 2_2:-44619154 Msa0253010:CDS
GAATTGATAGTTGGCGAGAT+TGG 0.340509 2_2:-44620311 Msa0253010:CDS
GAATTGATAGTTGGCGAGAC+TGG 0.348080 2_2:-44620080 Msa0253010:CDS
GAATTGATGGTTGGCGAGAC+TGG 0.350261 2_2:-44628543 Msa0253010:CDS
GGTAAAAGTGCAAAAGAAAA+AGG 0.351472 2_2:-44628457 Msa0253010:CDS
GAACTGATGGTTGGCGTGAT+TGG 0.362389 2_2:-44619240 Msa0253010:CDS
GCCCAGTCTCTCCAACATTC+TGG 0.364553 2_2:+44619112 None:intergenic
AATTGATAGTTGGCGAGATT+GGG 0.375511 2_2:-44620310 Msa0253010:CDS
ACATTCTCTTTCTCAACGTT+CGG 0.385718 2_2:+44628382 None:intergenic
TACCAGAATGTTGGAGAGAC+TGG 0.386499 2_2:-44619114 Msa0253010:CDS
AGACTGGGGTGGATCATTCT+GGG 0.405765 2_2:-44620064 Msa0253010:CDS
TTATTCTCTTTCTCAACGTC+CGG 0.435419 2_2:+44628508 None:intergenic
GAAGATGGACAAAAGAATAA+TGG 0.456271 2_2:-44619202 Msa0253010:CDS
GAAGATGGACAAGAGAATAA+TGG 0.457372 2_2:-44620273 Msa0253010:CDS
AGTGGAAGAGACAACATAGA+TGG 0.458620 2_2:-44619007 Msa0253010:CDS
GGATCTGAAGAAGAGAATAA+TGG 0.474269 2_2:-44620042 Msa0253010:CDS
TGATTGGGGAGGCTCATTCT+GGG 0.483330 2_2:-44619224 Msa0253010:CDS
AAAGAAAGTGCACATGGAAA+AGG 0.490392 2_2:-44619043 Msa0253010:CDS
CAAAAGTAGGAATTGATAGT+TGG 0.491040 2_2:-44620320 Msa0253010:CDS
AATTGATAGTTGGCGAGACT+GGG 0.496285 2_2:-44620079 Msa0253010:CDS
AATTGATGGTTGGCGAGACT+GGG 0.496285 2_2:-44628542 Msa0253010:CDS
AAAGGTGAAGACAAAGAAAG+TGG 0.496589 2_2:-44619025 Msa0253010:CDS
AGATTGGGGAGGCTCATTCT+GGG 0.497139 2_2:-44620295 Msa0253010:CDS
AAAGAATCCAAAACAAAAGT+AGG 0.499512 2_2:-44620333 Msa0253010:CDS
ATTGATAGTTGGCGAGATTG+GGG 0.501662 2_2:-44620309 Msa0253010:CDS
GTTGAGAAAGAGAATAATGA+TGG 0.505594 2_2:-44628502 Msa0253010:CDS
AACAGAAGGTTGGAGAGACT+GGG 0.521661 2_2:-44628416 Msa0253010:CDS
GGAGGCTCATTCTGGGAAGA+TGG 0.522549 2_2:-44619217 Msa0253010:CDS
GGAGGCTCATTCTGGGAAGA+TGG 0.522549 2_2:-44620288 Msa0253010:CDS
GTTGGTAGAATAAACAATGA+AGG 0.539641 2_2:-44628361 Msa0253010:intron
ACTGATGGTTGGCGTGATTG+GGG 0.549770 2_2:-44619238 Msa0253010:CDS
ACAGAAGGTGGACAAGGTAA+AGG 0.550489 2_2:-44619169 Msa0253010:CDS
ATGAAAGTGTACCAGAATGT+TGG 0.555399 2_2:-44619123 Msa0253010:CDS
AAAGAAGGTGGAGAAAGTAA+AGG 0.562819 2_2:-44620240 Msa0253010:intron
GATGGACAAAAGAATAATGG+TGG 0.565324 2_2:-44619199 Msa0253010:CDS
ATGAAAGTGTAACAGAAGGT+TGG 0.567802 2_2:-44628426 Msa0253010:CDS
AATGATGGAGGTGACAAAGA+AGG 0.570885 2_2:-44628487 Msa0253010:CDS
GATGAGAAAGAGAATGTTGG+TGG 0.571583 2_2:-44619073 Msa0253010:CDS
ACCAGAATGTTGGAGAGACT+GGG 0.580999 2_2:-44619113 Msa0253010:CDS
GAAGAAGAGAATAATGGTGG+AGG 0.583395 2_2:-44620036 Msa0253010:CDS
TCTGAAGAAGAGAATAATGG+TGG 0.583741 2_2:-44620039 Msa0253010:CDS
GGTGGAAGTGACAAAGAAGG+TGG 0.584359 2_2:-44620252 Msa0253010:CDS
ATAGATGGATACAGTGGTGG+AGG 0.584723 2_2:-44618992 Msa0253010:CDS
GATGGACAAGAGAATAATGG+TGG 0.590325 2_2:-44620270 Msa0253010:CDS
GAATGTTGGAGAGACTGGGC+AGG 0.591974 2_2:-44619109 Msa0253010:CDS
GTCCATGAAAGTGTAACAGA+AGG 0.596678 2_2:-44628430 Msa0253010:CDS
GAGAAAGAGAATAATGATGG+AGG 0.605467 2_2:-44628499 Msa0253010:CDS
AATGGTGGAAGTGACAAAGA+AGG 0.608395 2_2:-44620255 Msa0253010:CDS
GGACAAAAGAATAATGGTGG+AGG 0.609522 2_2:-44619196 Msa0253010:CDS
GATAGTTGGCGAGACTGGGG+TGG 0.617318 2_2:-44620075 Msa0253010:CDS
ATTGATGGTTGGCGAGACTG+GGG 0.619430 2_2:-44628541 Msa0253010:CDS
GGTGATGAAGAAAGCGGACA+AGG 0.625735 2_2:-44620015 Msa0253010:intron
GATGGTTGGCGAGACTGGGG+AGG 0.629051 2_2:-44628538 Msa0253010:CDS
GATGGTTGGCGTGATTGGGG+AGG 0.633075 2_2:-44619235 Msa0253010:CDS
GACGATGAGAAAGAGAATGT+TGG 0.639601 2_2:-44619076 Msa0253010:CDS
AATGGTGGAGGTGACACAGA+AGG 0.640622 2_2:-44619184 Msa0253010:CDS
GATAGTTGGCGAGATTGGGG+AGG 0.641171 2_2:-44620306 Msa0253010:CDS
AACATAGATGGATACAGTGG+TGG 0.644460 2_2:-44618995 Msa0253010:CDS
GACTGGGGTGGATCATTCTG+GGG 0.645011 2_2:-44620063 Msa0253010:CDS
AACGTTGAGAAAGAGAATGT+TGG 0.646351 2_2:-44628379 Msa0253010:CDS
GATGGAGGTGACAAAGAAGG+TGG 0.646594 2_2:-44628484 Msa0253010:CDS
GGTGGAGGTGACACAGAAGG+TGG 0.656244 2_2:-44619181 Msa0253010:CDS
ATAAACAAAGAAAGTGCACA+TGG 0.656785 2_2:-44619049 Msa0253010:CDS
ATTGATAGTTGGCGAGACTG+GGG 0.658166 2_2:-44620078 Msa0253010:CDS
GGTGACAAAGAAGGTGGACA+AGG 0.659918 2_2:-44628478 Msa0253010:CDS
GGTGACACAGAAGGTGGACA+AGG 0.666383 2_2:-44619175 Msa0253010:CDS
GGTGGAGGTGATGAAGAAAG+CGG 0.691381 2_2:-44620021 Msa0253010:CDS
GACAACATAGATGGATACAG+TGG 0.694460 2_2:-44618998 Msa0253010:CDS
ACAGAAGGTTGGAGAGACTG+GGG 0.696017 2_2:-44628415 Msa0253010:CDS
GAAGGTTGGAGAGACTGGGG+AGG 0.705293 2_2:-44628412 Msa0253010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTACATACTATAT+GGG + chr2_2:44620012-44620031 None:intergenic 10.0%
!!! ATTTTATTTTACATACTATA+TGG + chr2_2:44620013-44620032 None:intergenic 10.0%
!!! TAACTCAATTTATTTTTATA+GGG + chr2_2:44620581-44620600 None:intergenic 10.0%
!!! TTAACTCAATTTATTTTTAT+AGG + chr2_2:44620582-44620601 None:intergenic 10.0%
!!! ATACTAGTATAAATTTTTAA+AGG + chr2_2:44624300-44624319 None:intergenic 10.0%
!! AAAAGATAATATATATCATT+TGG + chr2_2:44626886-44626905 None:intergenic 10.0%
!! AAATTTACTTGTAGTTAAAT+AGG + chr2_2:44619640-44619659 None:intergenic 15.0%
!! ATAGTATGTAAAATAAAATG+AGG - chr2_2:44620014-44620033 Msa0253010:intron 15.0%
!! TGTTCTTATTATTATGTAAT+AGG + chr2_2:44620054-44620073 None:intergenic 15.0%
!! GTAGTATAATATAAAGATAT+TGG + chr2_2:44620104-44620123 None:intergenic 15.0%
!! CTTATATTATCAAAGTTATA+CGG - chr2_2:44620123-44620142 Msa0253010:intron 15.0%
!! AATAATATAACATGAAATTG+TGG + chr2_2:44620159-44620178 None:intergenic 15.0%
!!! CTTTTTTAACTTTAAAACAA+TGG - chr2_2:44620505-44620524 Msa0253010:intron 15.0%
!! AAAAAAATCCAAGTTTAATT+AGG + chr2_2:44621101-44621120 None:intergenic 15.0%
!!! TATTAAGAAATTTTTACGTT+GGG + chr2_2:44621624-44621643 None:intergenic 15.0%
!!! TTATTAAGAAATTTTTACGT+TGG + chr2_2:44621625-44621644 None:intergenic 15.0%
!! CATTTCTTAAAAATCATAAA+TGG - chr2_2:44621678-44621697 Msa0253010:intron 15.0%
!! ATAATTCTTAAACTTCAAAA+AGG - chr2_2:44621835-44621854 Msa0253010:intron 15.0%
!! ATCTTATAAATTCCATTAAA+TGG - chr2_2:44622812-44622831 Msa0253010:intron 15.0%
!! GTAGCAATTTATAATTAATA+AGG + chr2_2:44624103-44624122 None:intergenic 15.0%
!! TCAAATCTTAAAATTAGTAA+GGG + chr2_2:44626355-44626374 None:intergenic 15.0%
!!! ATGTTCCTAATATTTTTAAA+TGG - chr2_2:44626635-44626654 Msa0253010:intron 15.0%
!! CTAAACCATTTAAAAATATT+AGG + chr2_2:44626643-44626662 None:intergenic 15.0%
!! TATACCATGAAAAAAATATT+AGG + chr2_2:44627713-44627732 None:intergenic 15.0%
!! AAAAATTGAAAGGTTATATT+GGG + chr2_2:44627898-44627917 None:intergenic 15.0%
!! AAATGATAACATATATCATT+TGG + chr2_2:44627959-44627978 None:intergenic 15.0%
!! AAGAATAAAATTATCTTGAT+TGG + chr2_2:44628004-44628023 None:intergenic 15.0%
!! ATTTGACTACAATATAATAT+TGG - chr2_2:44628077-44628096 Msa0253010:intron 15.0%
!!! AATATAATATTGGTTAATCA+AGG - chr2_2:44628087-44628106 Msa0253010:intron 15.0%
!! AAAGAATCCAAAACAAAAAT+AGG - chr2_2:44618994-44619013 Msa0253010:CDS 20.0%
!!! ATCAATTCCTATTTTTGTTT+TGG + chr2_2:44619004-44619023 None:intergenic 20.0%
!! AAAACAAAAATAGGAATTGA+TGG - chr2_2:44619003-44619022 Msa0253010:CDS 20.0%
!! ATTCTATCCATTTAATTAAG+TGG + chr2_2:44619281-44619300 None:intergenic 20.0%
!! ACTTAATTAAATGGATAGAA+TGG - chr2_2:44619280-44619299 Msa0253010:intron 20.0%
!! GTAAAAGAACTACTTATTTA+TGG + chr2_2:44620082-44620101 None:intergenic 20.0%
!! GAAAAAGAGATTCTTATAAA+TGG - chr2_2:44620294-44620313 Msa0253010:CDS 20.0%
!! TACGAATATAATCAAAGTAA+GGG - chr2_2:44620416-44620435 Msa0253010:intron 20.0%
!! GAAAAAAGTAAATTTCCATT+AGG + chr2_2:44620864-44620883 None:intergenic 20.0%
!!! TTCGTATTTTTATGACATTT+TGG + chr2_2:44621291-44621310 None:intergenic 20.0%
!! TACGAAAATCAAATATATCA+CGG - chr2_2:44621305-44621324 Msa0253010:intron 20.0%
!!! AATTTGTTGATTGAATTTGA+AGG + chr2_2:44621721-44621740 None:intergenic 20.0%
!! TATCTTAATATTAAACTTCC+TGG - chr2_2:44623013-44623032 Msa0253010:intron 20.0%
!! AATAGTAACACATCTTTATA+TGG - chr2_2:44623104-44623123 Msa0253010:intron 20.0%
!!! AATCCAAGATTTATTTTAGA+AGG + chr2_2:44623505-44623524 None:intergenic 20.0%
!! TATACTTATATGTTCTATTG+TGG + chr2_2:44623541-44623560 None:intergenic 20.0%
!!! TAATGATAATGAATGAAGAT+TGG - chr2_2:44623686-44623705 Msa0253010:intron 20.0%
!!! AATGATAATGAATGAAGATT+GGG - chr2_2:44623687-44623706 Msa0253010:intron 20.0%
!! ACAAGTTTATGTTTATACTA+CGG + chr2_2:44623804-44623823 None:intergenic 20.0%
!!! CTTATGATTATTTTATACCA+TGG + chr2_2:44623855-44623874 None:intergenic 20.0%
!!! GTATAAATTTTTAAAGGCTT+CGG + chr2_2:44624294-44624313 None:intergenic 20.0%
!! AGAAAACAATGAAAATTAAC+AGG - chr2_2:44624408-44624427 Msa0253010:intron 20.0%
!!! TTTTAAATCTTTCAACTCAT+TGG + chr2_2:44626079-44626098 None:intergenic 20.0%
!! CTCAAATCTTAAAATTAGTA+AGG + chr2_2:44626356-44626375 None:intergenic 20.0%
!! ATGATTCCTAAAATATTTGA+TGG - chr2_2:44626461-44626480 Msa0253010:intron 20.0%
!!! GAAATACCATCAAATATTTT+AGG + chr2_2:44626470-44626489 None:intergenic 20.0%
!! TAGAAAATACCAATATTCAA+TGG - chr2_2:44626505-44626524 Msa0253010:intron 20.0%
!! TATCAATAACCATTGAATAT+TGG + chr2_2:44626517-44626536 None:intergenic 20.0%
!!! ATTTCTTTTTAGATAAGTGA+TGG - chr2_2:44626588-44626607 Msa0253010:intron 20.0%
!! TTTCTTTATGATGACTATTA+CGG - chr2_2:44626691-44626710 Msa0253010:intron 20.0%
!!! TAGAACTATGTTTAAGATTA+AGG - chr2_2:44626727-44626746 Msa0253010:intron 20.0%
!! AAAGAATCCAAAACAAAAAT+AGG - chr2_2:44618994-44619013 Msa0253010:CDS 20.0%
!!! ATCAATTCCTATTTTTGTTT+TGG + chr2_2:44619004-44619023 None:intergenic 20.0%
!!! TGATCCTAATATTTTTTTCA+TGG - chr2_2:44627706-44627725 Msa0253010:intron 20.0%
!!! TTTTCATGGTATAGATAAAT+TGG - chr2_2:44627720-44627739 Msa0253010:intron 20.0%
!! TGGTAATTTCTTTAATATCA+TGG + chr2_2:44627806-44627825 None:intergenic 20.0%
!! GAAAAATTGAAAGGTTATAT+TGG + chr2_2:44627899-44627918 None:intergenic 20.0%
!!! TAACCTTTCAATTTTTCAAT+AGG - chr2_2:44627902-44627921 Msa0253010:intron 20.0%
!! AGAGAATTCAAAACAAAAAT+AGG - chr2_2:44628297-44628316 Msa0253010:intron 20.0%
! TGATGACCTTAATATAAAGT+AGG + chr2_2:44619561-44619580 None:intergenic 25.0%
!!! AGTTAAATAGGCTTTTAAGT+AGG + chr2_2:44619628-44619647 None:intergenic 25.0%
!!! TTAATAGGCTTTGTTGTTAT+AGG + chr2_2:44619689-44619708 None:intergenic 25.0%
! TATAACAACAAAGCCTATTA+AGG - chr2_2:44619688-44619707 Msa0253010:intron 25.0%
! ATAACAACAAAGCCTATTAA+GGG - chr2_2:44619689-44619708 Msa0253010:intron 25.0%
! AAAAGCCTGTTTAGTTAAAT+AGG + chr2_2:44619851-44619870 None:intergenic 25.0%
! ACAATAAGTCAATATCCAAA+AGG - chr2_2:44620346-44620365 Msa0253010:CDS 25.0%
! CTACGAATATAATCAAAGTA+AGG - chr2_2:44620415-44620434 Msa0253010:intron 25.0%
! ACGAATATAATCAAAGTAAG+GGG - chr2_2:44620417-44620436 Msa0253010:intron 25.0%
! TACAGATACCTCATTTAAAA+GGG + chr2_2:44620607-44620626 None:intergenic 25.0%
! TTACAGATACCTCATTTAAA+AGG + chr2_2:44620608-44620627 None:intergenic 25.0%
! ATCTGTAAATAGAAACAACT+TGG - chr2_2:44620620-44620639 Msa0253010:intron 25.0%
! GTAAATTTCCATTAGGAATA+TGG + chr2_2:44620857-44620876 None:intergenic 25.0%
! ACGAAAATCAAATATATCAC+GGG - chr2_2:44621306-44621325 Msa0253010:intron 25.0%
! CTAAACATACTATGATAGTA+TGG - chr2_2:44621404-44621423 Msa0253010:intron 25.0%
!! AAATTTTTACGTTGGGAAAA+CGG + chr2_2:44621617-44621636 None:intergenic 25.0%
! AATTATTTAATATCTCGCAG+CGG - chr2_2:44621737-44621756 Msa0253010:intron 25.0%
! ATGAAGTATATGACTAATGT+AGG + chr2_2:44622124-44622143 None:intergenic 25.0%
! TGATGTTTATGATTAGTAAC+TGG + chr2_2:44622214-44622233 None:intergenic 25.0%
!! CAACTTGATAATCAAATTCA+TGG - chr2_2:44622354-44622373 Msa0253010:intron 25.0%
! TAATATGTCGAATTGTTAAG+AGG + chr2_2:44622455-44622474 None:intergenic 25.0%
! CAACATATATGAGCATAATT+AGG - chr2_2:44622568-44622587 Msa0253010:intron 25.0%
! TTAAGAAGTTGTCCATTTAA+TGG + chr2_2:44622827-44622846 None:intergenic 25.0%
! TATTGTGTATATGCACTATT+TGG + chr2_2:44622971-44622990 None:intergenic 25.0%
!!! TTTTAAGATGAATTTGGAGT+AGG + chr2_2:44623070-44623089 None:intergenic 25.0%
!!! GTGTAGTTTTAAGATGAATT+TGG + chr2_2:44623076-44623095 None:intergenic 25.0%
! ATAATTATAAGCCACAAACT+CGG - chr2_2:44623359-44623378 Msa0253010:intron 25.0%
! TGATTCTAACACTAGTTAAT+AGG - chr2_2:44623428-44623447 Msa0253010:intron 25.0%
!!! TAGTTAATAGGTATTGATCA+TGG - chr2_2:44623440-44623459 Msa0253010:intron 25.0%
!!! GAACCTTCTAAAATAAATCT+TGG - chr2_2:44623499-44623518 Msa0253010:intron 25.0%
!!! GTTTTGATTCTAATTTGACA+TGG + chr2_2:44624070-44624089 None:intergenic 25.0%
! AACAGGAAATCATATATAAC+AGG - chr2_2:44624425-44624444 Msa0253010:intron 25.0%
!! TGATTTTATGCTTGAGTATT+TGG - chr2_2:44624456-44624475 Msa0253010:intron 25.0%
! AAAAACATGTCATCTATTGA+AGG - chr2_2:44624822-44624841 Msa0253010:intron 25.0%
! AATGTTGTATCATATGACTA+TGG - chr2_2:44624861-44624880 Msa0253010:intron 25.0%
!! CATAATGTGACTATACATTT+TGG + chr2_2:44624964-44624983 None:intergenic 25.0%
! CAAAATGTATAGTCACATTA+TGG - chr2_2:44624962-44624981 Msa0253010:intron 25.0%
! ATTATGTGAACAAGATTCTA+AGG - chr2_2:44625347-44625366 Msa0253010:intron 25.0%
! TTATGTGAACAAGATTCTAA+GGG - chr2_2:44625348-44625367 Msa0253010:intron 25.0%
! TGAAAATCAATTGTGACAAA+AGG + chr2_2:44626384-44626403 None:intergenic 25.0%
!!! TTTGTCACAATTGATTTTCA+AGG - chr2_2:44626384-44626403 Msa0253010:intron 25.0%
!!! TTGTCACAATTGATTTTCAA+GGG - chr2_2:44626385-44626404 Msa0253010:intron 25.0%
! ACATCTTTAATGTACATATG+AGG - chr2_2:44626413-44626432 Msa0253010:intron 25.0%
!!! TTTTAGGAATCATTATCGAT+GGG + chr2_2:44626454-44626473 None:intergenic 25.0%
!!! ATTTTAGGAATCATTATCGA+TGG + chr2_2:44626455-44626474 None:intergenic 25.0%
! TAACCTTTCAATTTCTCAAT+AGG - chr2_2:44626831-44626850 Msa0253010:intron 25.0%
! GATAATATATATCATTTGGC+TGG + chr2_2:44626882-44626901 None:intergenic 25.0%
! TTATCTCTATAAATAGCATC+CGG - chr2_2:44626972-44626991 Msa0253010:intron 25.0%
! TAGTCAAATATGAATACAAC+CGG + chr2_2:44626994-44627013 None:intergenic 25.0%
! ATTTGACTACAATATACTGT+TGG - chr2_2:44627005-44627024 Msa0253010:intron 25.0%
!!! TATACATTGATTCTCATCAT+TGG + chr2_2:44627117-44627136 None:intergenic 25.0%
!!! AGTGTTTTTTGATTTGTAGT+TGG - chr2_2:44627196-44627215 Msa0253010:intron 25.0%
! AAAGAATCCAAAACAAAAGT+AGG - chr2_2:44627226-44627245 Msa0253010:intron 25.0%
!!! ATCAATTCCTACTTTTGTTT+TGG + chr2_2:44627236-44627255 None:intergenic 25.0%
!! CAAAAATAGGAATTGATAGT+TGG - chr2_2:44627470-44627489 Msa0253010:intron 25.0%
! TAGCAGATACTAATATTCAA+TGG - chr2_2:44627576-44627595 Msa0253010:intron 25.0%
!!! GGTTTTTGATAATAGTATGT+AGG - chr2_2:44627597-44627616 Msa0253010:intron 25.0%
! GAAGATAAGTGATGAAATAA+TGG - chr2_2:44627667-44627686 Msa0253010:intron 25.0%
! TTTCTTTCTGATGACTATTA+TGG - chr2_2:44627762-44627781 Msa0253010:intron 25.0%
! ACACCTATTGAAAAATTGAA+AGG + chr2_2:44627908-44627927 None:intergenic 25.0%
! AAAACAAAAATAGGAACTGA+TGG - chr2_2:44628306-44628325 Msa0253010:intron 25.0%
! CAAAAATAGGAATTGATGGT+TGG - chr2_2:44619007-44619026 Msa0253010:CDS 30.0%
GTTGAGAAAGAGAATAATGA+TGG - chr2_2:44619057-44619076 Msa0253010:CDS 30.0%
! GGTAAAAGTGCAAAAGAAAA+AGG - chr2_2:44619102-44619121 Msa0253010:CDS 30.0%
! GTTGGTAGAATAAACAATGA+AGG - chr2_2:44619198-44619217 Msa0253010:CDS 30.0%
ATAAACAATGAAGGTGAACA+TGG - chr2_2:44619207-44619226 Msa0253010:CDS 30.0%
GGAAAAGTTGCAAAAGAAAA+TGG - chr2_2:44619228-44619247 Msa0253010:CDS 30.0%
GTCTCTACCACTTAATTAAA+TGG - chr2_2:44619271-44619290 Msa0253010:CDS 30.0%
TTAAATGGATAGAATGGTAG+AGG - chr2_2:44619286-44619305 Msa0253010:intron 30.0%
CTTTAACAATGAAAATGGAG+AGG - chr2_2:44619345-44619364 Msa0253010:intron 30.0%
TACAGGCCTACTTTATATTA+AGG - chr2_2:44619552-44619571 Msa0253010:intron 30.0%
! GCTTGTTTAGCTTATTTAGT+AGG + chr2_2:44619598-44619617 None:intergenic 30.0%
!! GTTGTTATAGGCTTTTAAGT+AGG + chr2_2:44619677-44619696 None:intergenic 30.0%
CTATCTATTAGTCCCTTAAT+AGG + chr2_2:44619704-44619723 None:intergenic 30.0%
!! TTTTTAAAAAGCCTAAGCCT+AGG - chr2_2:44619867-44619886 Msa0253010:intron 30.0%
!! CATGTAGAGTCTTATTTCTA+GGG + chr2_2:44619977-44619996 None:intergenic 30.0%
!! ACATGTAGAGTCTTATTTCT+AGG + chr2_2:44619978-44619997 None:intergenic 30.0%
!!! TTCCATGCTATTTTTTCGAA+TGG - chr2_2:44620271-44620290 Msa0253010:CDS 30.0%
!!! TCCATGCTATTTTTTCGAAT+GGG - chr2_2:44620272-44620291 Msa0253010:CDS 30.0%
ATTCTTATAAATGGAGTACG+AGG - chr2_2:44620303-44620322 Msa0253010:CDS 30.0%
! AACGATGTTCAATTTCCTTT+TGG + chr2_2:44620364-44620383 None:intergenic 30.0%
CGAATATAATCAAAGTAAGG+GGG - chr2_2:44620418-44620437 Msa0253010:intron 30.0%
! AGTTAACTCCCTTTTAAATG+AGG - chr2_2:44620596-44620615 Msa0253010:intron 30.0%
!! GAAGTTTGTTAAGCTAAAAG+AGG - chr2_2:44620653-44620672 Msa0253010:intron 30.0%
ATAACACCTCAAAATGATGT+GGG + chr2_2:44620738-44620757 None:intergenic 30.0%
AATAACACCTCAAAATGATG+TGG + chr2_2:44620739-44620758 None:intergenic 30.0%
! GGGAATGAACAATTTTGAAT+AGG + chr2_2:44620886-44620905 None:intergenic 30.0%
CCAAGTTTAATTAGGTGTTT+AGG + chr2_2:44621093-44621112 None:intergenic 30.0%
CCTAAACACCTAATTAAACT+TGG - chr2_2:44621090-44621109 Msa0253010:intron 30.0%
ATTGAAGTGAATGAATTGTG+TGG + chr2_2:44621151-44621170 None:intergenic 30.0%
CGAAAATCAAATATATCACG+GGG - chr2_2:44621307-44621326 Msa0253010:intron 30.0%
ACTATCATAGTATGTTTAGC+AGG + chr2_2:44621403-44621422 None:intergenic 30.0%
ATACTATGATAGTATGGATG+TGG - chr2_2:44621410-44621429 Msa0253010:intron 30.0%
TAATTAGGAGGTCATTATTG+AGG + chr2_2:44621524-44621543 None:intergenic 30.0%
! AATTTTTACGTTGGGAAAAC+GGG + chr2_2:44621616-44621635 None:intergenic 30.0%
! CAGAGTTTTTCTTCACAAAA+CGG - chr2_2:44621648-44621667 Msa0253010:intron 30.0%
! TTCAACATCTAAAACAGTCT+TGG - chr2_2:44621766-44621785 Msa0253010:intron 30.0%
TTCAAAAAGGCAATACGTAA+AGG - chr2_2:44621848-44621867 Msa0253010:intron 30.0%
ATTATGCTCATATATGTTGC+TGG + chr2_2:44622567-44622586 None:intergenic 30.0%
CATTGCATACTCATTAAAGA+TGG + chr2_2:44622755-44622774 None:intergenic 30.0%
CATCTTTAATGAGTATGCAA+TGG - chr2_2:44622753-44622772 Msa0253010:intron 30.0%
!!! TGTTTTGGCATTTAGACAAT+TGG + chr2_2:44623258-44623277 None:intergenic 30.0%
!!! ATGAAAATGTCTTGCTGTTT+TGG + chr2_2:44623273-44623292 None:intergenic 30.0%
TAAGATTCCACACATGTTTA+AGG - chr2_2:44623653-44623672 Msa0253010:intron 30.0%
AAGATTCCACACATGTTTAA+GGG - chr2_2:44623654-44623673 Msa0253010:intron 30.0%
ACAGGTAAAAACAATGGAAA+AGG - chr2_2:44623753-44623772 Msa0253010:intron 30.0%
CAGTATAACCAATTAGATAG+AGG - chr2_2:44623906-44623925 Msa0253010:intron 30.0%
TGAATATGCCTCTATCTAAT+TGG + chr2_2:44623917-44623936 None:intergenic 30.0%
TTGATTTAGTGAACTTTCCT+TGG - chr2_2:44624519-44624538 Msa0253010:intron 30.0%
AGGAATCTGTATAATTGCTT+TGG - chr2_2:44624579-44624598 Msa0253010:intron 30.0%
GGAATCTGTATAATTGCTTT+GGG - chr2_2:44624580-44624599 Msa0253010:intron 30.0%
! ATTGATAACTTCTTCTGAAC+AGG + chr2_2:44625053-44625072 None:intergenic 30.0%
AATAAACATCACAAGATCAG+AGG - chr2_2:44625070-44625089 Msa0253010:intron 30.0%
TCCTTGTGTTTAAACTATGA+AGG - chr2_2:44625169-44625188 Msa0253010:intron 30.0%
ACCTTCATAGTTTAAACACA+AGG + chr2_2:44625173-44625192 None:intergenic 30.0%
!! GAAAAATGATGAAAGCATTG+AGG - chr2_2:44625255-44625274 Msa0253010:intron 30.0%
TATGTGAACAAGATTCTAAG+GGG - chr2_2:44625349-44625368 Msa0253010:intron 30.0%
ACCTAAAGTTACTGTTATTG+AGG - chr2_2:44625390-44625409 Msa0253010:intron 30.0%
TCCTCAATAACAGTAACTTT+AGG + chr2_2:44625394-44625413 None:intergenic 30.0%
TCTCTTAAATGTCATGAGAT+TGG - chr2_2:44625457-44625476 Msa0253010:intron 30.0%
TCAAGAAGAGAAGATCAAAA+AGG - chr2_2:44625706-44625725 Msa0253010:intron 30.0%
!! AGGTATATTCTAAGATTCCT+AGG - chr2_2:44626001-44626020 Msa0253010:intron 30.0%
GATTCAATAAGTTCATTCCT+AGG + chr2_2:44626021-44626040 None:intergenic 30.0%
! GCAATCTCTTGTTTACTTAA+AGG + chr2_2:44626258-44626277 None:intergenic 30.0%
TGGACAATTTAGCAAGTATA+CGG + chr2_2:44626323-44626342 None:intergenic 30.0%
! GGTTATTGATAATAGTCTGT+AGG - chr2_2:44626526-44626545 Msa0253010:intron 30.0%
TGAAACATGTTTATCAAACG+AGG + chr2_2:44626808-44626827 None:intergenic 30.0%
ACACCTATTGAGAAATTGAA+AGG + chr2_2:44626837-44626856 None:intergenic 30.0%
! AATATACTGTTGGTTGATCA+AGG - chr2_2:44627015-44627034 Msa0253010:intron 30.0%
! CAAAAGTAGGAATTGATAGT+TGG - chr2_2:44627239-44627258 Msa0253010:intron 30.0%
!!! AGTGTTTTTTGATTTGCAGT+TGG - chr2_2:44627427-44627446 Msa0253010:intron 30.0%
TAACAAGTGATTAAGACGTT+TGG + chr2_2:44627826-44627845 None:intergenic 30.0%
GAAGATGGACAAAAGAATAA+TGG - chr2_2:44628357-44628376 Msa0253010:intron 30.0%
! ATAAACAAAGAAAGTGCACA+TGG - chr2_2:44628510-44628529 Msa0253010:CDS 30.0%
TTATTCTCTTTCTCAACGTC+CGG + chr2_2:44619054-44619073 None:intergenic 35.0%
GAGAAAGAGAATAATGATGG+AGG - chr2_2:44619060-44619079 Msa0253010:CDS 35.0%
AACCTTCTGTTACACTTTCA+TGG + chr2_2:44619134-44619153 None:intergenic 35.0%
! ATGAAAGTGTAACAGAAGGT+TGG - chr2_2:44619133-44619152 Msa0253010:CDS 35.0%
ACATTCTCTTTCTCAACGTT+CGG + chr2_2:44619180-44619199 None:intergenic 35.0%
AACGTTGAGAAAGAGAATGT+TGG - chr2_2:44619180-44619199 Msa0253010:CDS 35.0%
AATGGTAGAGGTCTACATTT+GGG - chr2_2:44619298-44619317 Msa0253010:intron 35.0%
!! GGTGGCTTTAACAATGAAAA+TGG - chr2_2:44619340-44619359 Msa0253010:intron 35.0%
AGACATCGATGGAAATAAGT+AGG - chr2_2:44619373-44619392 Msa0253010:intron 35.0%
GACATCGATGGAAATAAGTA+GGG - chr2_2:44619374-44619393 Msa0253010:intron 35.0%
ACATCGATGGAAATAAGTAG+GGG - chr2_2:44619375-44619394 Msa0253010:intron 35.0%
!!! TGTAAATTTTTTCGTAGGCC+AGG + chr2_2:44619442-44619461 None:intergenic 35.0%
TGGCCTACGAAAAAATTTAC+AGG - chr2_2:44619441-44619460 Msa0253010:intron 35.0%
!!! AGGCCTGTAAATTTTTTCGT+AGG + chr2_2:44619447-44619466 None:intergenic 35.0%
TATAAAGTAGGCCTGTAAGT+AGG + chr2_2:44619549-44619568 None:intergenic 35.0%
!! AGGCTTTTAAGTAGGCTTTA+AGG + chr2_2:44619620-44619639 None:intergenic 35.0%
TATTAATAGGCCAGCCTATT+AGG - chr2_2:44619793-44619812 Msa0253010:intron 35.0%
AAAAGCCTGTTAAGCCTAAT+AGG + chr2_2:44619810-44619829 None:intergenic 35.0%
!! TTATTTCTAGGGTTGGGAAT+AGG + chr2_2:44619966-44619985 None:intergenic 35.0%
!! AGAGTCTTATTTCTAGGGTT+GGG + chr2_2:44619972-44619991 None:intergenic 35.0%
!! TAGAGTCTTATTTCTAGGGT+TGG + chr2_2:44619973-44619992 None:intergenic 35.0%
TCCCATTCGAAAAAATAGCA+TGG + chr2_2:44620276-44620295 None:intergenic 35.0%
ACATGAAGATTACACATGAG+TGG - chr2_2:44620460-44620479 Msa0253010:intron 35.0%
! GTTTGTTAAGCTAAAAGAGG+TGG - chr2_2:44620656-44620675 Msa0253010:intron 35.0%
!! TTGAGGTGTTATTTCTTCTG+AGG - chr2_2:44620746-44620765 Msa0253010:intron 35.0%
! ATTGTGTGGTAGTGAATGAT+TGG + chr2_2:44621137-44621156 None:intergenic 35.0%
GTGTAACGTCCACATAATTA+CGG + chr2_2:44621459-44621478 None:intergenic 35.0%
ATAATGACCTCCTAATTACG+AGG - chr2_2:44621526-44621545 Msa0253010:intron 35.0%
! ATTTTTACGTTGGGAAAACG+GGG + chr2_2:44621615-44621634 None:intergenic 35.0%
GAAAATGTTGCTCTTCGTAT+GGG + chr2_2:44621983-44622002 None:intergenic 35.0%
TGAAAATGTTGCTCTTCGTA+TGG + chr2_2:44621984-44622003 None:intergenic 35.0%
!! AGCAACATTTTCAAGCAGAA+GGG - chr2_2:44621991-44622010 Msa0253010:intron 35.0%
TCTTGATATGCAAATGCATG+TGG - chr2_2:44622534-44622553 Msa0253010:intron 35.0%
TTTATGCACAAACTACGTTG+GGG + chr2_2:44622673-44622692 None:intergenic 35.0%
CTTTATGCACAAACTACGTT+GGG + chr2_2:44622674-44622693 None:intergenic 35.0%
TTTATGCTCAAACTACGTTG+GGG + chr2_2:44622633-44622652 None:intergenic 35.0%
CTTTATGCTCAAACTACGTT+GGG + chr2_2:44622634-44622653 None:intergenic 35.0%
TCATTAAAGATGGAGGCTTT+AGG + chr2_2:44622745-44622764 None:intergenic 35.0%
TGCATACTCATTAAAGATGG+AGG + chr2_2:44622752-44622771 None:intergenic 35.0%
TATCTTGAAGTTGCAAGAGT+CGG + chr2_2:44622866-44622885 None:intergenic 35.0%
! TATATGCTGTATCTTGCTGT+TGG + chr2_2:44622909-44622928 None:intergenic 35.0%
TTAGTTATTAGAAGCTGTCC+AGG + chr2_2:44623034-44623053 None:intergenic 35.0%
! AGATGAATTTGGAGTAGGAA+AGG + chr2_2:44623065-44623084 None:intergenic 35.0%
GTCAACGAGAATTTCGTTAA+CGG + chr2_2:44623398-44623417 None:intergenic 35.0%
TTTCTCCTAGAGTTTGAATG+AGG - chr2_2:44623608-44623627 Msa0253010:intron 35.0%
GATAATGAATGAAGATTGGG+CGG - chr2_2:44623690-44623709 Msa0253010:intron 35.0%
ATACGATTTAACGGCAATGA+AGG - chr2_2:44623714-44623733 Msa0253010:intron 35.0%
TACGATTTAACGGCAATGAA+GGG - chr2_2:44623715-44623734 Msa0253010:intron 35.0%
GAGCAAACAGGTAAAAACAA+TGG - chr2_2:44623747-44623766 Msa0253010:intron 35.0%
!! AACAAAAGTCTCTAGAACCA+TGG - chr2_2:44623835-44623854 Msa0253010:intron 35.0%
AAGAACTATGTCTCCTAGAT+GGG + chr2_2:44624033-44624052 None:intergenic 35.0%
TAAGAACTATGTCTCCTAGA+TGG + chr2_2:44624034-44624053 None:intergenic 35.0%
TTCCTGTGTAAACAAGATCA+TGG - chr2_2:44624155-44624174 Msa0253010:intron 35.0%
! TACCATGATCTTGTTTACAC+AGG + chr2_2:44624160-44624179 None:intergenic 35.0%
TCAATTCTCCTGTCAGAAAT+TGG + chr2_2:44624222-44624241 None:intergenic 35.0%
GAATTGAGAAGCAAACCAAT+CGG - chr2_2:44624235-44624254 Msa0253010:intron 35.0%
GTCTGATAGAGTTCAGAATT+TGG + chr2_2:44624658-44624677 None:intergenic 35.0%
AGGTGAGAAAAACACAAGAA+GGG + chr2_2:44624733-44624752 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+AGG + chr2_2:44624734-44624753 None:intergenic 35.0%
! GTGTTTTTCTCACCTTCAAT+TGG - chr2_2:44624738-44624757 Msa0253010:intron 35.0%
TACAACATTATGACCAGAAC+TGG + chr2_2:44624850-44624869 None:intergenic 35.0%
AACAGACCTCCAATGTTTAA+TGG - chr2_2:44624909-44624928 Msa0253010:intron 35.0%
TCAGGATCTCCATTAAACAT+TGG + chr2_2:44624921-44624940 None:intergenic 35.0%
!! TGGCTTTAGATAAAGAGCTA+TGG - chr2_2:44624982-44625001 Msa0253010:intron 35.0%
!! GGCTTTAGATAAAGAGCTAT+GGG - chr2_2:44624983-44625002 Msa0253010:intron 35.0%
TAAGGGGTTTATCTATCAGA+TGG - chr2_2:44625365-44625384 Msa0253010:intron 35.0%
TACTGTTATTGAGGAAGCTA+AGG - chr2_2:44625399-44625418 Msa0253010:intron 35.0%
!!! ATAGTTTTTGGCTTTCTAGC+AGG + chr2_2:44625499-44625518 None:intergenic 35.0%
! GATGCTAGAGCAATAGTTTT+TGG + chr2_2:44625511-44625530 None:intergenic 35.0%
ACTATTGCTCTAGCATCTAA+AGG - chr2_2:44625514-44625533 Msa0253010:intron 35.0%
CTATTGCTCTAGCATCTAAA+GGG - chr2_2:44625515-44625534 Msa0253010:intron 35.0%
ATACTCTTCTTCAGACTCAT+TGG + chr2_2:44625563-44625582 None:intergenic 35.0%
TTCCAACAAACTTCAATACC+TGG - chr2_2:44625636-44625655 Msa0253010:intron 35.0%
AGAAGAAGCAGTGGTTATAA+AGG - chr2_2:44625682-44625701 Msa0253010:intron 35.0%
!! AACTTGTTGGATTTGAAGGT+TGG + chr2_2:44625817-44625836 None:intergenic 35.0%
ACCTTCAAATCCAACAAGTT+TGG - chr2_2:44625817-44625836 Msa0253010:intron 35.0%
!! TCCAAACTTGTTGGATTTGA+AGG + chr2_2:44625821-44625840 None:intergenic 35.0%
AAAGATTTGGATAGTGAGTC+AGG - chr2_2:44625874-44625893 Msa0253010:intron 35.0%
AAGATTTGGATAGTGAGTCA+GGG - chr2_2:44625875-44625894 Msa0253010:intron 35.0%
GGGTCTGATAAAGATAAAGT+TGG - chr2_2:44625895-44625914 Msa0253010:intron 35.0%
ACAACAAGAAAAGACTCTGT+TGG - chr2_2:44626122-44626141 Msa0253010:intron 35.0%
ATTAGTAAGGGCTTCATTGA+TGG + chr2_2:44626343-44626362 None:intergenic 35.0%
!! ACAATTGATTTTCAAGGGTC+AGG - chr2_2:44626390-44626409 Msa0253010:intron 35.0%
TACTACTTCTTATCTCTACC+AGG - chr2_2:44627078-44627097 Msa0253010:intron 35.0%
ACTACTTCTTATCTCTACCA+GGG - chr2_2:44627079-44627098 Msa0253010:intron 35.0%
! AATTGATAGTTGGCGAGATT+GGG - chr2_2:44627249-44627268 Msa0253010:intron 35.0%
GAAGATGGACAAGAGAATAA+TGG - chr2_2:44627286-44627305 Msa0253010:intron 35.0%
AAAGAAGGTGGAGAAAGTAA+AGG - chr2_2:44627319-44627338 Msa0253010:intron 35.0%
GGATCTGAAGAAGAGAATAA+TGG - chr2_2:44627517-44627536 Msa0253010:intron 35.0%
TCTGAAGAAGAGAATAATGG+TGG - chr2_2:44627520-44627539 Msa0253010:intron 35.0%
CTTACCTTGTTCGATAAACA+TGG - chr2_2:44627872-44627891 Msa0253010:intron 35.0%
! TGGCTGATTCTGAGAATAAT+AGG + chr2_2:44627939-44627958 None:intergenic 35.0%
! GAAAGCACATGAAGAAAAAC+TGG + chr2_2:44628124-44628143 None:intergenic 35.0%
CACACACAAACTTTGATCTT+TGG + chr2_2:44628191-44628210 None:intergenic 35.0%
!!! GTACTTTTTTGATTCGCAGT+TGG - chr2_2:44628267-44628286 Msa0253010:intron 35.0%
CAAAAATAGGAACTGATGGT+TGG - chr2_2:44628310-44628329 Msa0253010:intron 35.0%
GATGGACAAAAGAATAATGG+TGG - chr2_2:44628360-44628379 Msa0253010:intron 35.0%
! GGTAAAGGTGCAAAAGAAAA+AGG - chr2_2:44628405-44628424 Msa0253010:CDS 35.0%
AACATTCTGGTACACTTTCA+TGG + chr2_2:44628437-44628456 None:intergenic 35.0%
! ATGAAAGTGTACCAGAATGT+TGG - chr2_2:44628436-44628455 Msa0253010:CDS 35.0%
! AAAGAAAGTGCACATGGAAA+AGG - chr2_2:44628516-44628535 Msa0253010:CDS 35.0%
AAAGGTGAAGACAAAGAAAG+TGG - chr2_2:44628534-44628553 Msa0253010:CDS 35.0%
! AATGATGGAGGTGACAAAGA+AGG - chr2_2:44619072-44619091 Msa0253010:CDS 40.0%
! GTCCATGAAAGTGTAACAGA+AGG - chr2_2:44619129-44619148 Msa0253010:CDS 40.0%
GAATGGTAGAGGTCTACATT+TGG - chr2_2:44619297-44619316 Msa0253010:intron 40.0%
ATGGTAGAGGTCTACATTTG+GGG - chr2_2:44619299-44619318 Msa0253010:intron 40.0%
TTTGGGGAAAAAGACATGTG+AGG - chr2_2:44619315-44619334 Msa0253010:intron 40.0%
AAAAAGACATGTGAGGAAGG+TGG - chr2_2:44619322-44619341 Msa0253010:intron 40.0%
AAATAAGTAGGGGTGGGAAT+AGG - chr2_2:44619385-44619404 Msa0253010:intron 40.0%
!!! CTATCATAGGCCGTTTTTCT+GGG - chr2_2:44619483-44619502 Msa0253010:intron 40.0%
! TCCAGGCTTTTAAATAGGTC+AGG + chr2_2:44619514-44619533 None:intergenic 40.0%
ACCTATTTAAAAGCCTGGAC+TGG - chr2_2:44619515-44619534 Msa0253010:intron 40.0%
! TTAGGCTTAACAGGCTTTTC+TGG - chr2_2:44619811-44619830 Msa0253010:intron 40.0%
TAGTTAAATAGGCCAGGCTT+AGG + chr2_2:44619840-44619859 None:intergenic 40.0%
CCTGTTTAGTTAAATAGGCC+AGG + chr2_2:44619846-44619865 None:intergenic 40.0%
CCTGGCCTATTTAACTAAAC+AGG - chr2_2:44619843-44619862 Msa0253010:intron 40.0%
GGAAATTGAACATCGTTGAC+AGG - chr2_2:44620367-44620386 Msa0253010:intron 40.0%
GAAGATTACACATGAGTGGA+AGG - chr2_2:44620464-44620483 Msa0253010:intron 40.0%
!! AGGTGTTATTTCTTCTGAGG+TGG - chr2_2:44620749-44620768 Msa0253010:intron 40.0%
TCTCATGTGGTTAGATGACA+TGG - chr2_2:44620786-44620805 Msa0253010:intron 40.0%
GTTAGATGACATGGTCAACT+TGG - chr2_2:44620795-44620814 Msa0253010:intron 40.0%
TGGCAGAAAGGCCTAATAAA+CGG + chr2_2:44620837-44620856 None:intergenic 40.0%
CCATTAGGAATATGGCAGAA+AGG + chr2_2:44620849-44620868 None:intergenic 40.0%
CCTTTCTGCCATATTCCTAA+TGG - chr2_2:44620846-44620865 Msa0253010:intron 40.0%
ACTTGCATTGGGCTTATCTA+GGG + chr2_2:44620921-44620940 None:intergenic 40.0%
AACTTGCATTGGGCTTATCT+AGG + chr2_2:44620922-44620941 None:intergenic 40.0%
AGCGTGAGTTAACTACATTC+CGG + chr2_2:44620959-44620978 None:intergenic 40.0%
GAATGTAGTTAACTCACGCT+GGG - chr2_2:44620959-44620978 Msa0253010:intron 40.0%
AGTGCAAGTTAACTGTCGTT+GGG + chr2_2:44621012-44621031 None:intergenic 40.0%
!! AGTTAACTTGCACTGGTTTC+AGG - chr2_2:44621018-44621037 Msa0253010:intron 40.0%
TAGTATGTTTAGCAGGCTCT+AGG + chr2_2:44621396-44621415 None:intergenic 40.0%
TAACGTCCACATAATTACGG+AGG + chr2_2:44621456-44621475 None:intergenic 40.0%
TGTGGACGTTACACATAATC+CGG - chr2_2:44621465-44621484 Msa0253010:intron 40.0%
TTAGGAGGTCATTATTGAGG+AGG + chr2_2:44621521-44621540 None:intergenic 40.0%
TTCTAAGCCTCGTAATTAGG+AGG + chr2_2:44621536-44621555 None:intergenic 40.0%
TCCTAATTACGAGGCTTAGA+AGG - chr2_2:44621535-44621554 Msa0253010:intron 40.0%
ACCTTCTAAGCCTCGTAATT+AGG + chr2_2:44621539-44621558 None:intergenic 40.0%
TAATTACGAGGCTTAGAAGG+TGG - chr2_2:44621538-44621557 Msa0253010:intron 40.0%
CCATCCAACAAAGGTTGTTA+AGG + chr2_2:44621566-44621585 None:intergenic 40.0%
CCTTAACAACCTTTGTTGGA+TGG - chr2_2:44621563-44621582 Msa0253010:intron 40.0%
AACAATGAGCCATCCAACAA+AGG + chr2_2:44621575-44621594 None:intergenic 40.0%
TTTGTTGGATGGCTCATTGT+TGG - chr2_2:44621574-44621593 Msa0253010:intron 40.0%
! CAGGTAATCAAGATTAGCTG+CGG + chr2_2:44621953-44621972 None:intergenic 40.0%
!! GAGCAACATTTTCAAGCAGA+AGG - chr2_2:44621990-44622009 Msa0253010:intron 40.0%
!! GCAACATTTTCAAGCAGAAG+GGG - chr2_2:44621992-44622011 Msa0253010:intron 40.0%
GCTCATATATGTTGCTGGAT+TGG + chr2_2:44622562-44622581 None:intergenic 40.0%
TTATGCTCAAACTACGTTGG+TGG + chr2_2:44622632-44622651 None:intergenic 40.0%
GCTTTATGCTCAAACTACGT+TGG + chr2_2:44622635-44622654 None:intergenic 40.0%
TAGTTTGAGCATAAAGCTGC+CGG - chr2_2:44622638-44622657 Msa0253010:intron 40.0%
TTATGCACAAACTACGTTGG+GGG + chr2_2:44622672-44622691 None:intergenic 40.0%
GCTTTATGCACAAACTACGT+TGG + chr2_2:44622675-44622694 None:intergenic 40.0%
! TAGTTTGTGCATAAAGCTGC+CGG - chr2_2:44622678-44622697 Msa0253010:intron 40.0%
GCTTTATGCTCAAACTACGT+TGG + chr2_2:44622635-44622654 None:intergenic 40.0%
TAGTTTGAGCATAAAGCTGC+CGG - chr2_2:44622638-44622657 Msa0253010:intron 40.0%
GACTCAATCTTCCTACAACT+TGG - chr2_2:44622775-44622794 Msa0253010:intron 40.0%
TACGTTGTTGTCCAAGTTGT+AGG + chr2_2:44622789-44622808 None:intergenic 40.0%
! GAATTTGGAGTAGGAAAGGA+AGG + chr2_2:44623061-44623080 None:intergenic 40.0%
TAGAGCACACAAACATGCAA+TGG - chr2_2:44623307-44623326 Msa0253010:intron 40.0%
! AACCTTTGTTTCCGAGTTTG+TGG + chr2_2:44623373-44623392 None:intergenic 40.0%
AAGCCTAGCTAGAAATGGTT+GGG + chr2_2:44623575-44623594 None:intergenic 40.0%
ACTTGAAGCCTAGCTAGAAA+TGG + chr2_2:44623580-44623599 None:intergenic 40.0%
CATCTTCCCTTAAACATGTG+TGG + chr2_2:44623663-44623682 None:intergenic 40.0%
TTGGGCGGAATACGATTTAA+CGG - chr2_2:44623705-44623724 Msa0253010:intron 40.0%
ACTTGCAGCAAGGTCAAAAT+AGG - chr2_2:44623777-44623796 Msa0253010:intron 40.0%
TACACGTACCAATTTCTGAC+AGG - chr2_2:44624211-44624230 Msa0253010:intron 40.0%
! TGACTTGTGTTTGTACCGAT+TGG + chr2_2:44624253-44624272 None:intergenic 40.0%
AACTTTCCTTGGAAGTTCGA+GGG - chr2_2:44624530-44624549 Msa0253010:intron 40.0%
ACAGTACTACTTTCGGATTG+TGG - chr2_2:44624555-44624574 Msa0253010:intron 40.0%
TACTACTTTCGGATTGTGGA+AGG - chr2_2:44624559-44624578 Msa0253010:intron 40.0%
AGCGAATAATGTAGAGAGAG+AGG + chr2_2:44624613-44624632 None:intergenic 40.0%
CTCTATCAGACTCTCAACAT+TGG - chr2_2:44624667-44624686 Msa0253010:intron 40.0%
GGTGAGAAAAACACAAGAAG+GGG + chr2_2:44624732-44624751 None:intergenic 40.0%
GTGCTTAAGACAAACAGAAC+CGG + chr2_2:44624774-44624793 None:intergenic 40.0%
TCTATTGAAGGTTCCAGTTC+TGG - chr2_2:44624834-44624853 Msa0253010:intron 40.0%
! GGTACTGAAGATAAGTCATC+TGG - chr2_2:44624882-44624901 Msa0253010:intron 40.0%
GGATCTCCATTAAACATTGG+AGG + chr2_2:44624918-44624937 None:intergenic 40.0%
TTCTACCAAGAGAAAGTCTC+AGG + chr2_2:44624939-44624958 None:intergenic 40.0%
ATCTTCAAGTACTCCTTGTG+AGG + chr2_2:44625115-44625134 None:intergenic 40.0%
!! TTCATCAGTAGGTGTTGTTC+TGG - chr2_2:44625230-44625249 Msa0253010:intron 40.0%
GCATTGAGGATATGTACTCA+AGG - chr2_2:44625269-44625288 Msa0253010:intron 40.0%
TCCAGCTGCTGTTGAAAAAA+TGG - chr2_2:44625606-44625625 Msa0253010:intron 40.0%
!! AGCCAGGTATTGAAGTTTGT+TGG + chr2_2:44625641-44625660 None:intergenic 40.0%
ACAAACTTCAATACCTGGCT+TGG - chr2_2:44625641-44625660 Msa0253010:intron 40.0%
AAGTTCTTGAGAAGAAGCAG+TGG - chr2_2:44625673-44625692 Msa0253010:intron 40.0%
TGCTTCAATTGCAAGAAACC+AGG - chr2_2:44625730-44625749 Msa0253010:intron 40.0%
!! GGATTTGAAGGTTGGTTTCT+TGG + chr2_2:44625809-44625828 None:intergenic 40.0%
GATCTGTCTTCCAAACTTGT+TGG + chr2_2:44625830-44625849 None:intergenic 40.0%
ACTATCCAAATCTTTCCAGG+TGG + chr2_2:44625869-44625888 None:intergenic 40.0%
CTCACTATCCAAATCTTTCC+AGG + chr2_2:44625872-44625891 None:intergenic 40.0%
AGATGAAGCAAATGTAGCAG+TGG - chr2_2:44625918-44625937 Msa0253010:intron 40.0%
GATGAAGCAAATGTAGCAGT+GGG - chr2_2:44625919-44625938 Msa0253010:intron 40.0%
ATGAAGCAAATGTAGCAGTG+GGG - chr2_2:44625920-44625939 Msa0253010:intron 40.0%
! AGACTCTGGAGATGAAGATA+AGG - chr2_2:44625981-44626000 Msa0253010:intron 40.0%
! TGGCTGGTTGTGAGAATAAT+AGG + chr2_2:44626866-44626885 None:intergenic 40.0%
! GAATTGATAGTTGGCGAGAT+TGG - chr2_2:44627248-44627267 Msa0253010:intron 40.0%
! ATTGATAGTTGGCGAGATTG+GGG - chr2_2:44627250-44627269 Msa0253010:intron 40.0%
GATGGACAAGAGAATAATGG+TGG - chr2_2:44627289-44627308 Msa0253010:intron 40.0%
! AATGGTGGAAGTGACAAAGA+AGG - chr2_2:44627304-44627323 Msa0253010:intron 40.0%
! AATTGATAGTTGGCGAGACT+GGG - chr2_2:44627480-44627499 Msa0253010:intron 40.0%
GAAGAAGAGAATAATGGTGG+AGG - chr2_2:44627523-44627542 Msa0253010:intron 40.0%
GGACAAAAGAATAATGGTGG+AGG - chr2_2:44628363-44628382 Msa0253010:CDS 40.0%
GACGATGAGAAAGAGAATGT+TGG - chr2_2:44628483-44628502 Msa0253010:CDS 40.0%
GATGAGAAAGAGAATGTTGG+TGG - chr2_2:44628486-44628505 Msa0253010:CDS 40.0%
AGTGGAAGAGACAACATAGA+TGG - chr2_2:44628552-44628571 Msa0253010:CDS 40.0%
GACAACATAGATGGATACAG+TGG - chr2_2:44628561-44628580 Msa0253010:CDS 40.0%
AACATAGATGGATACAGTGG+TGG - chr2_2:44628564-44628583 Msa0253010:CDS 40.0%
! AATTGATGGTTGGCGAGACT+GGG - chr2_2:44619017-44619036 Msa0253010:CDS 45.0%
TAACAGAAGGTTGGAGAGAC+TGG - chr2_2:44619142-44619161 Msa0253010:CDS 45.0%
AACAGAAGGTTGGAGAGACT+GGG - chr2_2:44619143-44619162 Msa0253010:CDS 45.0%
GGGAAAAAGACATGTGAGGA+AGG - chr2_2:44619319-44619338 Msa0253010:intron 45.0%
TCGATGGAAATAAGTAGGGG+TGG - chr2_2:44619378-44619397 Msa0253010:intron 45.0%
CGATGGAAATAAGTAGGGGT+GGG - chr2_2:44619379-44619398 Msa0253010:intron 45.0%
AAAATTTACAGGCCTGAGCC+TGG - chr2_2:44619452-44619471 Msa0253010:intron 45.0%
CCAGAAAAACGGCCTATGAT+AGG + chr2_2:44619485-44619504 None:intergenic 45.0%
!!! CCTATCATAGGCCGTTTTTC+TGG - chr2_2:44619482-44619501 Msa0253010:intron 45.0%
! GCTTTTAAATAGGTCAGGCC+AGG + chr2_2:44619509-44619528 None:intergenic 45.0%
GCCTGACCTATTTAAAAGCC+TGG - chr2_2:44619510-44619529 Msa0253010:intron 45.0%
! GCCAGTCCAGGCTTTTAAAT+AGG + chr2_2:44619519-44619538 None:intergenic 45.0%
AGTAAGGGGGAGAACTATCA+AGG - chr2_2:44620431-44620450 Msa0253010:intron 45.0%
ATTACACATGAGTGGAAGGC+AGG - chr2_2:44620468-44620487 Msa0253010:intron 45.0%
CTCAAAATGATGTGGGAGTC+AGG + chr2_2:44620731-44620750 None:intergenic 45.0%
! CTGACTCCCACATCATTTTG+AGG - chr2_2:44620729-44620748 Msa0253010:intron 45.0%
!! ATTTCTTCTGAGGTGGTGCT+TGG - chr2_2:44620756-44620775 Msa0253010:intron 45.0%
!! TTTCTTCTGAGGTGGTGCTT+GGG - chr2_2:44620757-44620776 Msa0253010:intron 45.0%
GCTTGGGATTAGATCTCATG+TGG - chr2_2:44620773-44620792 Msa0253010:intron 45.0%
! CAACTTGGTGAACCATGACT+TGG - chr2_2:44620810-44620829 Msa0253010:intron 45.0%
CTAATAAACGGGCCAAGTCA+TGG + chr2_2:44620825-44620844 None:intergenic 45.0%
! CATGACTTGGCCCGTTTATT+AGG - chr2_2:44620823-44620842 Msa0253010:intron 45.0%
GGCAGAAAGGCCTAATAAAC+GGG + chr2_2:44620836-44620855 None:intergenic 45.0%
GCTTATCTAGGGGAATTTCG+GGG + chr2_2:44620910-44620929 None:intergenic 45.0%
GGCTTATCTAGGGGAATTTC+GGG + chr2_2:44620911-44620930 None:intergenic 45.0%
GGGCTTATCTAGGGGAATTT+CGG + chr2_2:44620912-44620931 None:intergenic 45.0%
CTTGCATTGGGCTTATCTAG+GGG + chr2_2:44620920-44620939 None:intergenic 45.0%
TAACTACATTCCGGATCGAG+CGG + chr2_2:44620950-44620969 None:intergenic 45.0%
GGAATGTAGTTAACTCACGC+TGG - chr2_2:44620958-44620977 Msa0253010:intron 45.0%
AAGTTAACTGTCGTTGGGGT+TGG + chr2_2:44621007-44621026 None:intergenic 45.0%
GTGCAAGTTAACTGTCGTTG+GGG + chr2_2:44621011-44621030 None:intergenic 45.0%
CAGTGCAAGTTAACTGTCGT+TGG + chr2_2:44621013-44621032 None:intergenic 45.0%
!! CAACGACAGTTAACTTGCAC+TGG - chr2_2:44621011-44621030 Msa0253010:intron 45.0%
TCAAATATATCACGGGGTCG+AGG - chr2_2:44621313-44621332 Msa0253010:intron 45.0%
AGTTACGGATTCCTCGAAAG+AGG + chr2_2:44621352-44621371 None:intergenic 45.0%
GAATCCGTAACTATGCGACT+AGG - chr2_2:44621360-44621379 Msa0253010:intron 45.0%
TGCACCTAGTCGCATAGTTA+CGG + chr2_2:44621367-44621386 None:intergenic 45.0%
ACGTTACACATAATCCGGAG+TGG - chr2_2:44621470-44621489 Msa0253010:intron 45.0%
CGTTACACATAATCCGGAGT+GGG - chr2_2:44621471-44621490 Msa0253010:intron 45.0%
GGCTCCTTAACAACCTTTGT+TGG - chr2_2:44621559-44621578 Msa0253010:intron 45.0%
TTGGATGGCTCATTGTTGGA+TGG - chr2_2:44621578-44621597 Msa0253010:intron 45.0%
TGGATGGCTCATTGTTGGAT+GGG - chr2_2:44621579-44621598 Msa0253010:intron 45.0%
CTCTGATACGTAACAGGATG+AGG + chr2_2:44621895-44621914 None:intergenic 45.0%
TAGGTGCTCTGATACGTAAC+AGG + chr2_2:44621901-44621920 None:intergenic 45.0%
! GTTACGTATCAGAGCACCTA+AGG - chr2_2:44621901-44621920 Msa0253010:intron 45.0%
CTATCTCTCACTGTGTCCTT+AGG + chr2_2:44621920-44621939 None:intergenic 45.0%
! TCTTCGTATGGGTAACTTGC+AGG + chr2_2:44621972-44621991 None:intergenic 45.0%
ACAAGTGAGCATAAAGCTGC+CGG - chr2_2:44622598-44622617 Msa0253010:intron 45.0%
AGTTTGAGCATAAAGCTGCC+GGG - chr2_2:44622639-44622658 Msa0253010:intron 45.0%
CAAACTACGTTGGGGACTTT+AGG + chr2_2:44622705-44622724 None:intergenic 45.0%
AGTTTGAGCATAAAGCTGCC+GGG - chr2_2:44622639-44622658 Msa0253010:intron 45.0%
AGCCACAAACTCGGAAACAA+AGG - chr2_2:44623368-44623387 Msa0253010:intron 45.0%
TAGCTAGAAATGGTTGGGGA+GGG + chr2_2:44623570-44623589 None:intergenic 45.0%
AGCCTAGCTAGAAATGGTTG+GGG + chr2_2:44623574-44623593 None:intergenic 45.0%
GAAGCCTAGCTAGAAATGGT+TGG + chr2_2:44623576-44623595 None:intergenic 45.0%
CACGACCTCATTCAAACTCT+AGG + chr2_2:44623616-44623635 None:intergenic 45.0%
TGGAAAAGGAACTTGCAGCA+AGG - chr2_2:44623767-44623786 Msa0253010:intron 45.0%
AACTATGTCTCCTAGATGGG+TGG + chr2_2:44624030-44624049 None:intergenic 45.0%
GAACTTTCCTTGGAAGTTCG+AGG - chr2_2:44624529-44624548 Msa0253010:intron 45.0%
GAGGGTGACAGTACTACTTT+CGG - chr2_2:44624548-44624567 Msa0253010:intron 45.0%
TTCAATTGGTACCAGAGCTC+CGG - chr2_2:44624752-44624771 Msa0253010:intron 45.0%
GAGATCCTGAGACTTTCTCT+TGG - chr2_2:44624931-44624950 Msa0253010:intron 45.0%
CTATGGGATGTTCGTGAAGA+AGG - chr2_2:44624999-44625018 Msa0253010:intron 45.0%
!! TGTTGTTGCTTTGCCTCACA+AGG - chr2_2:44625099-44625118 Msa0253010:intron 45.0%
CTACTGATGAACAAGCATGG+TGG + chr2_2:44625221-44625240 None:intergenic 45.0%
CACCATGCTTGTTCATCAGT+AGG - chr2_2:44625219-44625238 Msa0253010:intron 45.0%
CACCTACTGATGAACAAGCA+TGG + chr2_2:44625224-44625243 None:intergenic 45.0%
AGGTTTCAGACTCTAGTCTC+TGG - chr2_2:44625289-44625308 Msa0253010:intron 45.0%
!! TCTGAAGAAGAGTATCCTGC+TGG - chr2_2:44625568-44625587 Msa0253010:intron 45.0%
TCTTCATCAGAATCTCCAGC+AGG + chr2_2:44625586-44625605 None:intergenic 45.0%
!!! GCCATTTTTTCAACAGCAGC+TGG + chr2_2:44625610-44625629 None:intergenic 45.0%
ACTTCTTGTTCTTCCAAGCC+AGG + chr2_2:44625657-44625676 None:intergenic 45.0%
!!! GCTTTGCTTTTTCCTTCTGC+AGG + chr2_2:44625780-44625799 None:intergenic 45.0%
ACAGATCAAGCAGAGTCTGA+TGG - chr2_2:44625843-44625862 Msa0253010:intron 45.0%
TCATCTCCAGAGTCTGTATC+AGG + chr2_2:44625976-44625995 None:intergenic 45.0%
ATTGGATGTCTGAATTGCCC+TGG + chr2_2:44627099-44627118 None:intergenic 45.0%
! GAATTGATAGTTGGCGAGAC+TGG - chr2_2:44627479-44627498 Msa0253010:intron 45.0%
! ATTGATAGTTGGCGAGACTG+GGG - chr2_2:44627481-44627500 Msa0253010:intron 45.0%
TGGGCCATGTTTATCGAACA+AGG + chr2_2:44627879-44627898 None:intergenic 45.0%
AACTGATGGTTGGCGTGATT+GGG - chr2_2:44628320-44628339 Msa0253010:intron 45.0%
ACAGAAGGTGGACAAGGTAA+AGG - chr2_2:44628390-44628409 Msa0253010:CDS 45.0%
TACCAGAATGTTGGAGAGAC+TGG - chr2_2:44628445-44628464 Msa0253010:CDS 45.0%
ACCAGAATGTTGGAGAGACT+GGG - chr2_2:44628446-44628465 Msa0253010:CDS 45.0%
ATAGATGGATACAGTGGTGG+AGG - chr2_2:44628567-44628586 Msa0253010:CDS 45.0%
!!! TTTTAATAAATAGTATTAAT+AGG - chr2_2:44619780-44619799 Msa0253010:intron 5.0%
!!! CTTTTAATTAAATATAATAA+AGG + chr2_2:44627409-44627428 None:intergenic 5.0%
! GAATTGATGGTTGGCGAGAC+TGG - chr2_2:44619016-44619035 Msa0253010:CDS 50.0%
! ATTGATGGTTGGCGAGACTG+GGG - chr2_2:44619018-44619037 Msa0253010:CDS 50.0%
GATGGAGGTGACAAAGAAGG+TGG - chr2_2:44619075-44619094 Msa0253010:CDS 50.0%
GGTGACAAAGAAGGTGGACA+AGG - chr2_2:44619081-44619100 Msa0253010:CDS 50.0%
ACAGAAGGTTGGAGAGACTG+GGG - chr2_2:44619144-44619163 Msa0253010:CDS 50.0%
GAGAGGAAGAGAGACATCGA+TGG - chr2_2:44619362-44619381 Msa0253010:intron 50.0%
!!! TTTTTTCGTAGGCCAGGCTC+AGG + chr2_2:44619436-44619455 None:intergenic 50.0%
AACGGCCTATGATAGGCCAT+AGG + chr2_2:44619478-44619497 None:intergenic 50.0%
TGGCCTGAAAGCCTACTTAC+AGG - chr2_2:44619535-44619554 Msa0253010:intron 50.0%
AGGCCTGTAAGTAGGCTTTC+AGG + chr2_2:44619541-44619560 None:intergenic 50.0%
GCCAGCCTATTAGGCTTAAC+AGG - chr2_2:44619802-44619821 Msa0253010:intron 50.0%
GCCTGTTAAGCCTAATAGGC+TGG + chr2_2:44619806-44619825 None:intergenic 50.0%
!! CTTTTCTGGAAGCCTAAGCC+TGG - chr2_2:44619825-44619844 Msa0253010:intron 50.0%
TCGTAGATAGGCCTAGGCTT+AGG + chr2_2:44619881-44619900 None:intergenic 50.0%
CCTGTTTCGTAGATAGGCCT+AGG + chr2_2:44619887-44619906 None:intergenic 50.0%
CCTAGGCCTATCTACGAAAC+AGG - chr2_2:44619884-44619903 Msa0253010:intron 50.0%
ATCTAGGGGAATTTCGGGGT+GGG + chr2_2:44620906-44620925 None:intergenic 50.0%
TATCTAGGGGAATTTCGGGG+TGG + chr2_2:44620907-44620926 None:intergenic 50.0%
! AGCGGCAGGTAACTTGCATT+GGG + chr2_2:44620932-44620951 None:intergenic 50.0%
ACGGATTCCTCGAAAGAGGA+GGG + chr2_2:44621348-44621367 None:intergenic 50.0%
TACGGATTCCTCGAAAGAGG+AGG + chr2_2:44621349-44621368 None:intergenic 50.0%
ACGCCTCCTCCGTAATTATG+TGG - chr2_2:44621447-44621466 Msa0253010:intron 50.0%
CGTCCACATAATTACGGAGG+AGG + chr2_2:44621453-44621472 None:intergenic 50.0%
CTAAAACAGTCTTGGCACGC+AGG - chr2_2:44621774-44621793 Msa0253010:intron 50.0%
! TCAAGATTAGCTGCGGTCGT+GGG + chr2_2:44621946-44621965 None:intergenic 50.0%
! ATCAAGATTAGCTGCGGTCG+TGG + chr2_2:44621947-44621966 None:intergenic 50.0%
! CGTCGAGTCGAGTTGTTAAG+AGG + chr2_2:44622479-44622498 None:intergenic 50.0%
CAAGTGAGCATAAAGCTGCC+GGG - chr2_2:44622599-44622618 Msa0253010:intron 50.0%
!! TACGTTGGTGGCTTTAAGCC+CGG + chr2_2:44622620-44622639 None:intergenic 50.0%
CAAACTACGTTGGGGGCTTT+AGG + chr2_2:44622665-44622684 None:intergenic 50.0%
TACGTTGGGGACTTTAGGTC+CGG + chr2_2:44622700-44622719 None:intergenic 50.0%
!! AAAGATGGAGGCTTTAGGCC+CGG + chr2_2:44622740-44622759 None:intergenic 50.0%
AGCTAGAAATGGTTGGGGAG+GGG + chr2_2:44623569-44623588 None:intergenic 50.0%
CTAGCTAGAAATGGTTGGGG+AGG + chr2_2:44623571-44623590 None:intergenic 50.0%
!! CTCCCCAACCATTTCTAGCT+AGG - chr2_2:44623569-44623588 Msa0253010:intron 50.0%
!! CCTAGATGGGTGGCTTTAGA+AGG + chr2_2:44624020-44624039 None:intergenic 50.0%
!! CCTTCTAAAGCCACCCATCT+AGG - chr2_2:44624017-44624036 Msa0253010:intron 50.0%
! GGAGCTCTGGTACCAATTGA+AGG + chr2_2:44624753-44624772 None:intergenic 50.0%
CAATCAGCAATGCAGTGTCC+TGG + chr2_2:44625751-44625770 None:intergenic 50.0%
TGATTGTCCTGACCTGCAGA+AGG - chr2_2:44625765-44625784 Msa0253010:intron 50.0%
!! GCTTTTTCCTTCTGCAGGTC+AGG + chr2_2:44625775-44625794 None:intergenic 50.0%
GATGGCCACCTGGAAAGATT+TGG - chr2_2:44625861-44625880 Msa0253010:intron 50.0%
GCTGAACCTGATACAGACTC+TGG - chr2_2:44625967-44625986 Msa0253010:intron 50.0%
AGATTGGGGAGGCTCATTCT+GGG - chr2_2:44627264-44627283 Msa0253010:intron 50.0%
GGTGGAAGTGACAAAGAAGG+TGG - chr2_2:44627307-44627326 Msa0253010:intron 50.0%
AGACTGGGGTGGATCATTCT+GGG - chr2_2:44627495-44627514 Msa0253010:intron 50.0%
GGTGGAGGTGATGAAGAAAG+CGG - chr2_2:44627538-44627557 Msa0253010:intron 50.0%
GGTGATGAAGAAAGCGGACA+AGG - chr2_2:44627544-44627563 Msa0253010:intron 50.0%
GAACTGATGGTTGGCGTGAT+TGG - chr2_2:44628319-44628338 Msa0253010:intron 50.0%
ACTGATGGTTGGCGTGATTG+GGG - chr2_2:44628321-44628340 Msa0253010:intron 50.0%
TGATTGGGGAGGCTCATTCT+GGG - chr2_2:44628335-44628354 Msa0253010:intron 50.0%
! AATGGTGGAGGTGACACAGA+AGG - chr2_2:44628375-44628394 Msa0253010:CDS 50.0%
! AGACTGGGCAGGCTCATTTT+GGG - chr2_2:44628461-44628480 Msa0253010:CDS 50.0%
CCTATGATAGGCCATAGGCC+AGG + chr2_2:44619473-44619492 None:intergenic 55.0%
CCTGGCCTATGGCCTATCAT+AGG - chr2_2:44619470-44619489 Msa0253010:intron 55.0%
!!! ATAGGCCGTTTTTCTGGGCC+TGG - chr2_2:44619488-44619507 Msa0253010:intron 55.0%
TCAGGCCAGGCCCAGAAAAA+CGG + chr2_2:44619496-44619515 None:intergenic 55.0%
GCCTATCTACGAAACAGGCC+AGG - chr2_2:44619889-44619908 Msa0253010:intron 55.0%
GCCTGGCCTGTTTCGTAGAT+AGG + chr2_2:44619893-44619912 None:intergenic 55.0%
! TCTAGGGTTGGGAATAGGCC+AGG + chr2_2:44619961-44619980 None:intergenic 55.0%
! GAGCGGCAGGTAACTTGCAT+TGG + chr2_2:44620933-44620952 None:intergenic 55.0%
AAGTTACCTGCCGCTCGATC+CGG - chr2_2:44620937-44620956 Msa0253010:intron 55.0%
TTCCTCGAAAGAGGAGGGAG+AGG + chr2_2:44621343-44621362 None:intergenic 55.0%
GAGAGCTATTCGACCCACTC+CGG + chr2_2:44621487-44621506 None:intergenic 55.0%
GGGACAGTGTGTGAGCAAAC+AGG - chr2_2:44623735-44623754 Msa0253010:intron 55.0%
CTGTCACCCTCGAACTTCCA+AGG + chr2_2:44624539-44624558 None:intergenic 55.0%
GACAAACAGAACCGGAGCTC+TGG + chr2_2:44624766-44624785 None:intergenic 55.0%
GATAGTTGGCGAGATTGGGG+AGG - chr2_2:44627253-44627272 Msa0253010:intron 55.0%
GAGATTGGGGAGGCTCATTC+TGG - chr2_2:44627263-44627282 Msa0253010:intron 55.0%
! GGAGGCTCATTCTGGGAAGA+TGG - chr2_2:44627271-44627290 Msa0253010:intron 55.0%
GAGACTGGGGTGGATCATTC+TGG - chr2_2:44627494-44627513 Msa0253010:intron 55.0%
GACTGGGGTGGATCATTCTG+GGG - chr2_2:44627496-44627515 Msa0253010:intron 55.0%
GTGATTGGGGAGGCTCATTC+TGG - chr2_2:44628334-44628353 Msa0253010:intron 55.0%
! GGAGGCTCATTCTGGGAAGA+TGG - chr2_2:44627271-44627290 Msa0253010:intron 55.0%
GGTGACACAGAAGGTGGACA+AGG - chr2_2:44628384-44628403 Msa0253010:CDS 55.0%
GCCCAGTCTCTCCAACATTC+TGG + chr2_2:44628450-44628469 None:intergenic 55.0%
GAATGTTGGAGAGACTGGGC+AGG - chr2_2:44628450-44628469 Msa0253010:CDS 55.0%
! GAGACTGGGCAGGCTCATTT+TGG - chr2_2:44628460-44628479 Msa0253010:CDS 55.0%
! AGACTGGGGAGGCGCATTTC+CGG - chr2_2:44619032-44619051 Msa0253010:CDS 60.0%
GAAGGTTGGAGAGACTGGGG+AGG - chr2_2:44619147-44619166 Msa0253010:CDS 60.0%
AGTAGGGGTGGGAATAGGCC+AGG - chr2_2:44619390-44619409 Msa0253010:intron 60.0%
TATCAAAGCCTGGCCTGGCC+TGG + chr2_2:44619411-44619430 None:intergenic 60.0%
! AGGCCAGGCCAGGCTTTGAT+AGG - chr2_2:44619410-44619429 Msa0253010:intron 60.0%
AGGCCTATCAAAGCCTGGCC+TGG + chr2_2:44619416-44619435 None:intergenic 60.0%
GGCTCAGGCCTATCAAAGCC+TGG + chr2_2:44619421-44619440 None:intergenic 60.0%
! GGCTTTGATAGGCCTGAGCC+TGG - chr2_2:44619421-44619440 Msa0253010:intron 60.0%
ATAGGCCATAGGCCAGGCTC+AGG + chr2_2:44619467-44619486 None:intergenic 60.0%
GTAGGCTTTCAGGCCAGTCC+AGG + chr2_2:44619531-44619550 None:intergenic 60.0%
TCTACGAAACAGGCCAGGCC+AGG - chr2_2:44619894-44619913 Msa0253010:intron 60.0%
CACATGAGTGGAAGGCAGGC+AGG - chr2_2:44620472-44620491 Msa0253010:intron 60.0%
TACATTCCGGATCGAGCGGC+AGG + chr2_2:44620946-44620965 None:intergenic 60.0%
CTCGAAAGAGGAGGGAGAGG+CGG + chr2_2:44621340-44621359 None:intergenic 60.0%
!! TACGTTGGGGGCTTTAGGCC+CGG + chr2_2:44622660-44622679 None:intergenic 60.0%
AGCAGAGTCTGATGGCCACC+TGG - chr2_2:44625851-44625870 Msa0253010:intron 60.0%
GATAGTTGGCGAGACTGGGG+TGG - chr2_2:44627484-44627503 Msa0253010:intron 60.0%
GATGGTTGGCGTGATTGGGG+AGG - chr2_2:44628324-44628343 Msa0253010:intron 60.0%
GGTGGAGGTGACACAGAAGG+TGG - chr2_2:44628378-44628397 Msa0253010:CDS 60.0%
GATGGTTGGCGAGACTGGGG+AGG - chr2_2:44619021-44619040 Msa0253010:CDS 65.0%
ACAGGCCTGAGCCTGGCCTA+TGG - chr2_2:44619459-44619478 Msa0253010:intron 65.0%
!!! TGTTTTGGCCTGGCCTGGCC+TGG + chr2_2:44619910-44619929 None:intergenic 65.0%
AGGCCAGGCCAGGCCAAAAC+AGG - chr2_2:44619909-44619928 Msa0253010:intron 65.0%
!!! TGGCCTGTTTTGGCCTGGCC+TGG + chr2_2:44619915-44619934 None:intergenic 65.0%
AGGCCAGGCCAAAACAGGCC+AGG - chr2_2:44619914-44619933 Msa0253010:intron 65.0%
GCCAAAACAGGCCAGGCCGT+AGG - chr2_2:44619921-44619940 Msa0253010:intron 65.0%
! GCCTACGGCCTGGCCTGTTT+TGG + chr2_2:44619925-44619944 None:intergenic 65.0%
ATAGGCCAGGCCGGCCTACA+GGG + chr2_2:44619948-44619967 None:intergenic 65.0%
AATAGGCCAGGCCGGCCTAC+AGG + chr2_2:44619949-44619968 None:intergenic 65.0%
GGGTTGGGAATAGGCCAGGC+CGG + chr2_2:44619957-44619976 None:intergenic 65.0%
CGCCTCTCCCTCCTCTTTCG+AGG - chr2_2:44621338-44621357 Msa0253010:intron 65.0%
!! ACGGAGGAGGCGTTGCGTGA+TGG + chr2_2:44621440-44621459 None:intergenic 65.0%
GGGTGGGAATAGGCCAGGCC+AGG - chr2_2:44619395-44619414 Msa0253010:intron 70.0%
GGAATAGGCCAGGCCAGGCC+AGG - chr2_2:44619400-44619419 Msa0253010:intron 70.0%
GAAACAGGCCAGGCCAGGCC+AGG - chr2_2:44619899-44619918 Msa0253010:intron 70.0%
!!! CGGCCTGGCCTGTTTTGGCC+TGG + chr2_2:44619920-44619939 None:intergenic 70.0%
TAGGCCAGGCCGGCCTACAG+GGG + chr2_2:44619947-44619966 None:intergenic 70.0%
GCCAGGCCGTAGGCCCCTGT+AGG - chr2_2:44619931-44619950 Msa0253010:intron 75.0%
GCCTACAGGGGCCTACGGCC+TGG + chr2_2:44619935-44619954 None:intergenic 75.0%
GGCCGTAGGCCCCTGTAGGC+CGG - chr2_2:44619935-44619954 Msa0253010:intron 75.0%
GGCCGGCCTACAGGGGCCTA+CGG + chr2_2:44619940-44619959 None:intergenic 75.0%
TAGGCCCCTGTAGGCCGGCC+TGG - chr2_2:44619940-44619959 Msa0253010:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 44618985 44628596 44618985 ID=Msa0253010;Name=Msa0253010
chr2_2 mRNA 44618985 44628596 44618985 ID=Msa0253010-mRNA-1;Parent=Msa0253010;Name=Msa0253010-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0.66|0.5|4|0|264
chr2_2 exon 44628362 44628596 44628362 ID=Msa0253010-mRNA-1:exon:13738;Parent=Msa0253010-mRNA-1
chr2_2 exon 44620241 44620366 44620241 ID=Msa0253010-mRNA-1:exon:13737;Parent=Msa0253010-mRNA-1
chr2_2 exon 44620016 44620135 44620016 ID=Msa0253010-mRNA-1:exon:13736;Parent=Msa0253010-mRNA-1
chr2_2 exon 44618985 44619295 44618985 ID=Msa0253010-mRNA-1:exon:13735;Parent=Msa0253010-mRNA-1
chr2_2 CDS 44628362 44628596 44628362 ID=Msa0253010-mRNA-1:cds;Parent=Msa0253010-mRNA-1
chr2_2 CDS 44620241 44620366 44620241 ID=Msa0253010-mRNA-1:cds;Parent=Msa0253010-mRNA-1
chr2_2 CDS 44620016 44620135 44620016 ID=Msa0253010-mRNA-1:cds;Parent=Msa0253010-mRNA-1
chr2_2 CDS 44618985 44619295 44618985 ID=Msa0253010-mRNA-1:cds;Parent=Msa0253010-mRNA-1
Gene Sequence

>Msa0253010

GGTGTAACGAAAGAATCCAAAACAAAAATAGGAATTGATGGTTGGCGAGACTGGGGAGGCGCATTTCCGGACGTTGAGAAAGAGAATAATGATGGAGGTGACAAAGAAGGTGGACAAGGTAAAAGTGCAAAAGAAAAAGGTGAAGTCCATGAAAGTGTAACAGAAGGTTGGAGAGACTGGGGAGGCGCATTTCCGAACGTTGAGAAAGAGAATGTTGGTAGAATAAACAATGAAGTTGGTGTAACAAAAGAATCCAAAACAAAAGTAGGAATTGATAGTTGGCGAGATTGGGGAGGCTCATTCTGGGAAGATGGACAAGAGAATAATGGTGGAAGTGACAAAGAAGGTGGAGAAAGTAAAGTTGGTGTAACAAAAGAATCCAAAACAAAAATAGGAATTGATAGTTGGCGAGACTGGGGTGGATCATTCTGGGGATCTGAAGAAGAGAATAATGGTGGAGGTGATGAAGAAAGCGGACAAGTTGGTGTAACAAGAGAATTCAAAACAAAAATAGGAACTGATGGTTGGCGTGATTGGGGAGGCTCATTCTGGGAAGATGGACAAAAGAATAATGGTGGAGGTGACACAGAAGGTGGACAAGGTAAAGGTGCAAAAGAAAAAGGTGAAGTCCATGAAAGTGTACCAGAATGTTGGAGAGACTGGGCAGGCTCATTTTGGGACGATGAGAAAGAGAATGTTGGTGGAATAAACAAAGAAAGTGCACATGGAAAAGGTGAAGACAAAGAAAGTGGAAGAGACAACATAGATGGATACAGTGGTGGAGGTTTGAAT

Protein sequence

>Msa0253010

GVTKESKTKIGIDGWRDWGGAFPDVEKENNDGGDKEGGQGKSAKEKGEVHESVTEGWRDWGGAFPNVEKENVGRINNEVGVTKESKTKVGIDSWRDWGGSFWEDGQENNGGSDKEGGESKVGVTKESKTKIGIDSWRDWGGSFWGSEEENNGGGDEESGQVGVTREFKTKIGTDGWRDWGGSFWEDGQKNNGGGDTEGGQGKGAKEKGEVHESVPECWRDWAGSFWDDEKENVGGINKESAHGKGEDKESGRDNIDGYSGGGLN