Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254820 | XP_003596317.1 | 87.838 | 518 | 13 | 3 | 1 | 493 | 1 | 493 | 0.0 | 909 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254820 | G7ITF0 | 87.838 | 518 | 13 | 3 | 1 | 493 | 1 | 493 | 0.0 | 909 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0254820 | Msa0294850 | 0.876359 | 1.486664e-68 | -8.615850e-47 |
| Msa0254820 | Msa0332560 | 0.884243 | 2.264096e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254820 | MtrunA17_Chr2g0315511 | 87.838 | 518 | 13 | 3 | 1 | 493 | 1 | 493 | 0.0 | 909 |
| Msa0254820 | MtrunA17_Chr8g0359721 | 84.416 | 154 | 24 | 0 | 117 | 270 | 25 | 178 | 1.09e-89 | 271 |
| Msa0254820 | MtrunA17_Chr8g0364941 | 39.722 | 360 | 156 | 9 | 37 | 366 | 68 | 396 | 1.09e-67 | 226 |
| Msa0254820 | MtrunA17_Chr5g0413801 | 38.660 | 388 | 176 | 13 | 21 | 378 | 50 | 405 | 3.36e-66 | 223 |
| Msa0254820 | MtrunA17_Chr6g0451131 | 35.910 | 401 | 185 | 13 | 17 | 371 | 43 | 417 | 3.17e-60 | 207 |
| Msa0254820 | MtrunA17_Chr8g0359711 | 54.967 | 151 | 51 | 7 | 350 | 491 | 1 | 143 | 2.46e-34 | 126 |
| Msa0254820 | MtrunA17_Chr8g0364901 | 33.023 | 215 | 109 | 3 | 25 | 239 | 22 | 201 | 3.45e-28 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254820 | AT3G14860.1 | 56.564 | 518 | 140 | 18 | 12 | 490 | 21 | 492 | 0.0 | 520 |
| Msa0254820 | AT3G14860.2 | 56.647 | 519 | 139 | 17 | 12 | 490 | 21 | 493 | 0.0 | 519 |
| Msa0254820 | AT1G23880.1 | 38.544 | 371 | 179 | 7 | 17 | 366 | 103 | 445 | 9.26e-66 | 222 |
| Msa0254820 | AT1G70280.1 | 40.922 | 347 | 158 | 8 | 38 | 366 | 1 | 318 | 1.16e-65 | 219 |
| Msa0254820 | AT1G70280.2 | 40.741 | 351 | 161 | 8 | 34 | 366 | 59 | 380 | 2.86e-65 | 219 |
| Msa0254820 | AT1G23880.2 | 39.255 | 349 | 164 | 6 | 38 | 366 | 1 | 321 | 5.55e-65 | 216 |
| Msa0254820 | AT5G14890.1 | 34.006 | 347 | 183 | 6 | 37 | 365 | 70 | 388 | 9.95e-54 | 188 |
| Msa0254820 | AT1G23890.1 | 40.175 | 229 | 105 | 6 | 39 | 266 | 23 | 220 | 1.04e-37 | 139 |
| Msa0254820 | AT1G23890.2 | 39.301 | 229 | 107 | 4 | 39 | 266 | 23 | 220 | 2.36e-36 | 139 |
Find 159 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGTCTAGGCCGTTCTTTC+TGG | 0.113839 | 2_2:+48401480 | None:intergenic |
| ATTGGTAGCTGGGTCATTTC+AGG | 0.184957 | 2_2:-48404852 | Msa0254820:CDS |
| TTGACTTTATATTAATTATT+AGG | 0.187342 | 2_2:-48405036 | Msa0254820:CDS |
| TAATTCACTTTCCACGTAAA+TGG | 0.190545 | 2_2:-48406132 | Msa0254820:five_prime_UTR |
| TAAAGTTGTGTTCTTAGTTT+TGG | 0.220484 | 2_2:-48401066 | Msa0254820:three_prime_UTR |
| ATCATCCATGGTTATGCCTT+TGG | 0.231390 | 2_2:+48404778 | None:intergenic |
| GGATTTGAATCCAGGACTTT+TGG | 0.289426 | 2_2:-48401045 | Msa0254820:three_prime_UTR |
| GCAGATATCCTTATAGTTGT+TGG | 0.297802 | 2_2:-48402671 | Msa0254820:intron |
| AGTGCACATATTCGATATAA+TGG | 0.308727 | 2_2:+48401253 | None:intergenic |
| TTGAAAATGGAGAGAGAAAA+TGG | 0.311306 | 2_2:+48405910 | None:intergenic |
| TCATCCATGGTTATGCCTTT+GGG | 0.313054 | 2_2:+48404779 | None:intergenic |
| CAGCGTGAGTTGGTTGAAAA+TGG | 0.314787 | 2_2:+48405897 | None:intergenic |
| TATAGTTGTTGGTGCTGTTT+TGG | 0.318708 | 2_2:-48402660 | Msa0254820:CDS |
| TCATCAGGACAAGAGTTTAA+AGG | 0.320976 | 2_2:-48401953 | Msa0254820:CDS |
| TCCGAGTATGCTGAATTCTA+TGG | 0.323748 | 2_2:-48401542 | Msa0254820:CDS |
| TTCGATTTAGCATATGATAA+TGG | 0.328338 | 2_2:+48401506 | None:intergenic |
| TAAGATATCCCTTGAAGCTT+TGG | 0.330766 | 2_2:-48401837 | Msa0254820:CDS |
| CTGTTACTGTTACCGAAAAT+AGG | 0.337324 | 2_2:-48401679 | Msa0254820:CDS |
| AAACTGCTCGATTTCACCTT+TGG | 0.340830 | 2_2:+48401599 | None:intergenic |
| TGCATGCTTCAGCAGGGATT+TGG | 0.344530 | 2_2:-48402623 | Msa0254820:CDS |
| GGAGGCTGGACTTCGTCTTC+TGG | 0.351381 | 2_2:+48401725 | None:intergenic |
| GGCATAACCATGGATGATAA+AGG | 0.363679 | 2_2:-48404773 | Msa0254820:CDS |
| GATCCCGGATGGCCATCTTT+TGG | 0.365545 | 2_2:-48401881 | Msa0254820:CDS |
| ACAGCTGCCCTCGGCTCAAC+AGG | 0.371694 | 2_2:+48401401 | None:intergenic |
| AATTTGATCGTTATAATATG+AGG | 0.375286 | 2_2:-48401361 | Msa0254820:CDS |
| GCGGTGTTAGTCCGGTATTC+CGG | 0.380645 | 2_2:+48401768 | None:intergenic |
| TTGGAGTCGCAATTTCTGTT+TGG | 0.381664 | 2_2:-48400982 | Msa0254820:three_prime_UTR |
| AAACAGCACCAACAACTATA+AGG | 0.385372 | 2_2:+48402663 | None:intergenic |
| CATCAGGACAAGAGTTTAAA+GGG | 0.388430 | 2_2:-48401952 | Msa0254820:CDS |
| CTTTGCTTCTGAATATTTCT+CGG | 0.391575 | 2_2:+48401625 | None:intergenic |
| ATCCTTCAGCGGTGTTAGTC+CGG | 0.395014 | 2_2:+48401760 | None:intergenic |
| CTTAGTTTGAGAAGAAGTTA+TGG | 0.395154 | 2_2:+48405991 | None:intergenic |
| ACCACCACTTTCTCAGTGTA+TGG | 0.401735 | 2_2:-48405077 | Msa0254820:CDS |
| AGTCAAATGTTGCTGGCTAC+AGG | 0.405357 | 2_2:-48404574 | Msa0254820:CDS |
| TGCCACATGCATGCTTCAGC+AGG | 0.408908 | 2_2:-48402630 | Msa0254820:CDS |
| TGCAGATAGCAGAGGAAGAT+TGG | 0.411036 | 2_2:-48404870 | Msa0254820:intron |
| TCTTTACTGCTCTCCGGGAT+TGG | 0.412695 | 2_2:+48401905 | None:intergenic |
| CTGCTCGATTTCACCTTTGG+AGG | 0.412793 | 2_2:+48401602 | None:intergenic |
| TTTGAAGATCGGTGCTTACT+AGG | 0.413195 | 2_2:+48401569 | None:intergenic |
| AATCTTGCCATCAGAAAGAT+TGG | 0.418915 | 2_2:-48404725 | Msa0254820:CDS |
| TCGGCCAACCTGTTCCTTGT+TGG | 0.431123 | 2_2:-48404498 | Msa0254820:CDS |
| CTTGTTACTGAGAGTTGAAT+CGG | 0.432352 | 2_2:+48401312 | None:intergenic |
| AGATTGGAGTTATACCTTAT+CGG | 0.432777 | 2_2:-48405171 | Msa0254820:CDS |
| TCCTTGTTGGTCATTGATAG+AGG | 0.433415 | 2_2:-48404485 | Msa0254820:CDS |
| CATAGGTTTCTGTTTGCAAT+GGG | 0.437633 | 2_2:-48400940 | Msa0254820:three_prime_UTR |
| AACATTCCCTTTATCATCCA+TGG | 0.441373 | 2_2:+48404766 | None:intergenic |
| GGATCCTCTTTACTGCTCTC+CGG | 0.441772 | 2_2:+48401899 | None:intergenic |
| ATCAATGACCAACAAGGAAC+AGG | 0.443067 | 2_2:+48404490 | None:intergenic |
| GGAGGAAAGTCAAATGTTGC+TGG | 0.444320 | 2_2:-48404581 | Msa0254820:CDS |
| TATGCATCAGTCAATATCAT+AGG | 0.448406 | 2_2:-48400957 | Msa0254820:three_prime_UTR |
| GATCCTCTTTACTGCTCTCC+GGG | 0.453440 | 2_2:+48401900 | None:intergenic |
| CACATTTCAAATTTAACAGC+CGG | 0.454963 | 2_2:-48401787 | Msa0254820:CDS |
| TTCAACTTAACCAAAAGTCC+TGG | 0.455177 | 2_2:+48401035 | None:intergenic |
| AGAATAGTATTTATAGATGA+AGG | 0.457512 | 2_2:-48405007 | Msa0254820:intron |
| AATGTTCTTCAATTTGAGAA+TGG | 0.458459 | 2_2:-48405226 | Msa0254820:CDS |
| TTGGTAGCTGGGTCATTTCA+GGG | 0.461417 | 2_2:-48404851 | Msa0254820:CDS |
| GCATAACCATGGATGATAAA+GGG | 0.462122 | 2_2:-48404772 | Msa0254820:CDS |
| TTCTGAATATTTCTCGGCAA+TGG | 0.467055 | 2_2:+48401631 | None:intergenic |
| GCAATTTAGTCACAACATGC+TGG | 0.467689 | 2_2:+48400881 | None:intergenic |
| GGTGAAATCGAGCAGTTTCA+AGG | 0.467708 | 2_2:-48401594 | Msa0254820:CDS |
| ATTTCGATGTGGTATATGTT+CGG | 0.467909 | 2_2:-48404517 | Msa0254820:CDS |
| ATCACAACTCACAAGTGATT+CGG | 0.469451 | 2_2:+48401159 | None:intergenic |
| AGGGTAGGGCGGTGATCAAA+AGG | 0.473003 | 2_2:+48406166 | None:intergenic |
| TTGTCCAAAAGATGGCCATC+CGG | 0.474257 | 2_2:+48401877 | None:intergenic |
| AGCAGAGGAAGATTGGTAGC+TGG | 0.477436 | 2_2:-48404863 | Msa0254820:CDS |
| AACTCACAAGTGATTCGGTA+TGG | 0.478569 | 2_2:+48401164 | None:intergenic |
| TCCAGCCTCCATTAGTCAAA+AGG | 0.479284 | 2_2:-48401712 | Msa0254820:CDS |
| AAATTTAACAGCCGGAATAC+CGG | 0.480857 | 2_2:-48401779 | Msa0254820:CDS |
| TAAATGACACAGAGATCATC+AGG | 0.482832 | 2_2:-48401968 | Msa0254820:intron |
| TGACAAACGCATGCCAATCC+CGG | 0.483246 | 2_2:-48401918 | Msa0254820:CDS |
| GAATATTTCTCGGCAATGGT+TGG | 0.483363 | 2_2:+48401635 | None:intergenic |
| TTAGGTGTGACTACCATAGC+TGG | 0.483410 | 2_2:-48404602 | Msa0254820:intron |
| ATTGATAATCGCAGTCCTCC+TGG | 0.486083 | 2_2:+48404432 | None:intergenic |
| TCTAGTTCAATTTCAAGCAC+AGG | 0.486482 | 2_2:-48404410 | Msa0254820:intron |
| TATGCTGAATTCTATGGATC+TGG | 0.486793 | 2_2:-48401536 | Msa0254820:CDS |
| TCATGTCATTCAGACGCTCT+TGG | 0.488734 | 2_2:-48401001 | Msa0254820:three_prime_UTR |
| TGTCCAAAAGATGGCCATCC+GGG | 0.493623 | 2_2:+48401878 | None:intergenic |
| TCATAGGTTTCTGTTTGCAA+TGG | 0.494925 | 2_2:-48400941 | Msa0254820:three_prime_UTR |
| ATCAGAAAGATTGGAGATGC+TGG | 0.496384 | 2_2:-48404716 | Msa0254820:intron |
| GTCGTGGAAGGAAATGAGAT+TGG | 0.497348 | 2_2:-48405187 | Msa0254820:CDS |
| TTAGCCTCAGCTCCATTTGT+CGG | 0.499536 | 2_2:+48401425 | None:intergenic |
| CGAAAATAGGCAAATGCCAC+AGG | 0.499691 | 2_2:-48401666 | Msa0254820:CDS |
| TGAGAAGAAGTTATGGCAAG+TGG | 0.500466 | 2_2:+48405998 | None:intergenic |
| ATGCACCAGCCAAAGCTTCA+AGG | 0.501795 | 2_2:+48401828 | None:intergenic |
| TTGAAGATCGGTGCTTACTA+GGG | 0.502387 | 2_2:+48401570 | None:intergenic |
| TATATTATGCAGGAAATCAA+TGG | 0.506758 | 2_2:-48400827 | Msa0254820:three_prime_UTR |
| ATATTATGAATATATTATGC+AGG | 0.507250 | 2_2:-48400837 | Msa0254820:three_prime_UTR |
| TCAGAAACACGGATCCGATA+AGG | 0.510200 | 2_2:+48405157 | None:intergenic |
| ATAGAGGAAATGCTGCTCTT+CGG | 0.511182 | 2_2:-48404469 | Msa0254820:CDS |
| GCAGAGGAAGATTGGTAGCT+GGG | 0.514052 | 2_2:-48404862 | Msa0254820:CDS |
| ATATCCCTTGAAGCTTTGGC+TGG | 0.514331 | 2_2:-48401833 | Msa0254820:CDS |
| TCCATAGAATTCAGCATACT+CGG | 0.517153 | 2_2:+48401541 | None:intergenic |
| GCAATAAGTTGTCCAAAAGA+TGG | 0.517370 | 2_2:+48401869 | None:intergenic |
| GATCGTTATAATATGAGGGC+TGG | 0.518594 | 2_2:-48401356 | Msa0254820:CDS |
| ATTTGACTTTCCTCCAGCTA+TGG | 0.522706 | 2_2:+48404589 | None:intergenic |
| AAGGGATATCTTAGAAAGAT+CGG | 0.530728 | 2_2:+48401847 | None:intergenic |
| TATGAGGGCTGGTTATGTAC+CGG | 0.534793 | 2_2:-48401345 | Msa0254820:CDS |
| TCGGAAAATTATTCTTGACC+AGG | 0.536568 | 2_2:-48404450 | Msa0254820:CDS |
| TGATTAAACCGAGCATCACT+AGG | 0.541022 | 2_2:+48404803 | None:intergenic |
| ATTTGATCGTTATAATATGA+GGG | 0.541043 | 2_2:-48401360 | Msa0254820:CDS |
| CTATGATCAACAGCTGCCCT+CGG | 0.543296 | 2_2:+48401392 | None:intergenic |
| CCAACTCACGCTGCTCCTGC+AGG | 0.544465 | 2_2:-48405887 | Msa0254820:intron |
| ATAAAGTCAAGAGAACAAAC+AGG | 0.546301 | 2_2:+48405049 | None:intergenic |
| GAGAACTTAGCATCCTCACT+AGG | 0.546505 | 2_2:+48404545 | None:intergenic |
| CCTGCAGGAGCAGCGTGAGT+TGG | 0.557687 | 2_2:+48405887 | None:intergenic |
| TACCGGACTAACACCGCTGA+AGG | 0.559206 | 2_2:-48401762 | Msa0254820:CDS |
| CTGTTAAATTTGAAATGTGA+GGG | 0.559220 | 2_2:+48401791 | None:intergenic |
| GGCTAAACCTGTTGAGCCGA+GGG | 0.561495 | 2_2:-48401408 | Msa0254820:CDS |
| TCGGATCCGTGTTTCTGAAG+AGG | 0.562002 | 2_2:-48405152 | Msa0254820:CDS |
| TGCACCAGCCAAAGCTTCAA+GGG | 0.563368 | 2_2:+48401829 | None:intergenic |
| GTCATACCCAGCTTCATAAG+TGG | 0.564489 | 2_2:+48401123 | None:intergenic |
| GTCAAATGTTGCTGGCTACA+GGG | 0.570531 | 2_2:-48404573 | Msa0254820:CDS |
| AGCATCTCCAATCTTTCTGA+TGG | 0.573743 | 2_2:+48404718 | None:intergenic |
| CAATTTAGTCACAACATGCT+GGG | 0.576991 | 2_2:+48400882 | None:intergenic |
| AGGCTAAACCTGTTGAGCCG+AGG | 0.578331 | 2_2:-48401409 | Msa0254820:CDS |
| GCTGTTAAATTTGAAATGTG+AGG | 0.579431 | 2_2:+48401790 | None:intergenic |
| GCAGCCATACACTGAGAAAG+TGG | 0.580337 | 2_2:+48405073 | None:intergenic |
| AATCGAAGAGCCAGAAAGAA+CGG | 0.586075 | 2_2:-48401490 | Msa0254820:CDS |
| TCATACCCAGCTTCATAAGT+GGG | 0.586678 | 2_2:+48401124 | None:intergenic |
| AATGTTGCTGGCTACAGGGA+CGG | 0.588694 | 2_2:-48404569 | Msa0254820:CDS |
| GGCTACACTGATCATGTGGA+TGG | 0.589310 | 2_2:-48404830 | Msa0254820:CDS |
| GGAGAGAGAAAATGGAAGCA+AGG | 0.591326 | 2_2:+48405918 | None:intergenic |
| ATGAGGGCTGGTTATGTACC+GGG | 0.592535 | 2_2:-48401344 | Msa0254820:CDS |
| CACCATCCTCTTCAGAAACA+CGG | 0.594660 | 2_2:+48405146 | None:intergenic |
| ACACAACTTTAAAACTCATG+AGG | 0.597068 | 2_2:+48401078 | None:intergenic |
| CACAACTTTAAAACTCATGA+GGG | 0.601865 | 2_2:+48401079 | None:intergenic |
| GAAAATTATTCTTGACCAGG+AGG | 0.606430 | 2_2:-48404447 | Msa0254820:CDS |
| AGAAAGAACGGCCTAGACAT+CGG | 0.608437 | 2_2:-48401478 | Msa0254820:CDS |
| ACTCACAAGTGATTCGGTAT+GGG | 0.608512 | 2_2:+48401165 | None:intergenic |
| GAGAGCAGTAAAGAGGATCC+CGG | 0.609183 | 2_2:-48401896 | Msa0254820:CDS |
| AATCCCGGAGAGCAGTAAAG+AGG | 0.610675 | 2_2:-48401903 | Msa0254820:CDS |
| TTGAATCGGAAGGACTCTCC+CGG | 0.610821 | 2_2:+48401326 | None:intergenic |
| TATGGGTCAACATTAAGCAC+AGG | 0.611111 | 2_2:+48401182 | None:intergenic |
| GTAGTTGAGACTGTCGTGGA+AGG | 0.615503 | 2_2:-48405199 | Msa0254820:CDS |
| TTCAGAAGCAAAGCCTCCAA+AGG | 0.616320 | 2_2:-48401615 | Msa0254820:CDS |
| ATCCGTGTTTCTGAAGAGGA+TGG | 0.623423 | 2_2:-48405148 | Msa0254820:CDS |
| ATGGAAAACCTAGTGATGCT+CGG | 0.626220 | 2_2:-48404811 | Msa0254820:CDS |
| TATGCTATTGCAGATAGCAG+AGG | 0.632275 | 2_2:-48404878 | Msa0254820:intron |
| CTACAGGGACGGACCTAGTG+AGG | 0.633446 | 2_2:-48404558 | Msa0254820:CDS |
| GCCACATGCATGCTTCAGCA+GGG | 0.638543 | 2_2:-48402629 | Msa0254820:CDS |
| TCATCCCAAAGGCATAACCA+TGG | 0.642162 | 2_2:-48404783 | Msa0254820:CDS |
| GTTCTCTAATGATTTCGATG+TGG | 0.642456 | 2_2:-48404528 | Msa0254820:CDS |
| GCTCGGTTTAATCATCCCAA+AGG | 0.645409 | 2_2:-48404794 | Msa0254820:CDS |
| TCAGGGCTACACTGATCATG+TGG | 0.649867 | 2_2:-48404834 | Msa0254820:CDS |
| TCCTCTATCAATGACCAACA+AGG | 0.651015 | 2_2:+48404484 | None:intergenic |
| ATGACCAACAAGGAACAGGT+TGG | 0.653390 | 2_2:+48404494 | None:intergenic |
| ATGGTTGGAGTATGTACCTG+TGG | 0.658014 | 2_2:+48401650 | None:intergenic |
| CATACCCAGCTTCATAAGTG+GGG | 0.658660 | 2_2:+48401125 | None:intergenic |
| ATCACAAAACGATCCTTCAG+CGG | 0.663735 | 2_2:+48401749 | None:intergenic |
| TTACTGAGAGTTGAATCGGA+AGG | 0.667757 | 2_2:+48401316 | None:intergenic |
| GCAGTAAAGAGGATCCCGGA+TGG | 0.667794 | 2_2:-48401892 | Msa0254820:CDS |
| TCCCTGCTGAAGCATGCATG+TGG | 0.690176 | 2_2:+48402628 | None:intergenic |
| CATCGGCACCGAGAAAAGAG+CGG | 0.690979 | 2_2:-48401461 | Msa0254820:CDS |
| TGAATTCTATGGATCTGGTG+AGG | 0.693280 | 2_2:-48401531 | Msa0254820:CDS |
| ATACCCAGCTTCATAAGTGG+GGG | 0.695174 | 2_2:+48401126 | None:intergenic |
| GGTGTGACTACCATAGCTGG+AGG | 0.704707 | 2_2:-48404599 | Msa0254820:CDS |
| GAAGCTGGGTATGACCACAA+TGG | 0.707914 | 2_2:-48401115 | Msa0254820:three_prime_UTR |
| TTATGTAGTTGAGACTGTCG+TGG | 0.712210 | 2_2:-48405203 | Msa0254820:CDS |
| GCCATACACTGAGAAAGTGG+TGG | 0.753502 | 2_2:+48405076 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGACTTTATATTAATTATT+AGG | - | chr2_2:48401953-48401972 | Msa0254820:CDS | 10.0% |
| !!! | ATTTTTTTTATCATTTTGAA+AGG | - | chr2_2:48403274-48403293 | Msa0254820:intron | 10.0% |
| !! | TTAAATAATGTTAATGAATC+AGG | - | chr2_2:48401288-48401307 | Msa0254820:three_prime_UTR | 15.0% |
| !!! | GATCTTCATAAATATTTTTT+AGG | - | chr2_2:48402369-48402388 | Msa0254820:intron | 15.0% |
| !!! | GATATTAAATGATACTATTT+TGG | - | chr2_2:48402660-48402679 | Msa0254820:CDS | 15.0% |
| !!! | TTTTTGATTATATTTGCAAA+AGG | + | chr2_2:48403412-48403431 | None:intergenic | 15.0% |
| !! | AATAATAACTTAGGATTATT+TGG | - | chr2_2:48403718-48403737 | Msa0254820:intron | 15.0% |
| !! | TTTGTAAATATACGAAATTT+CGG | - | chr2_2:48404432-48404451 | Msa0254820:CDS | 15.0% |
| !! | ATATTATGAATATATTATGC+AGG | - | chr2_2:48406152-48406171 | Msa0254820:five_prime_UTR | 15.0% |
| !!! | AATTTTCCATTTTTACCAAA+TGG | - | chr2_2:48401161-48401180 | Msa0254820:three_prime_UTR | 20.0% |
| !!! | ATTTTCCATTTTTACCAAAT+GGG | - | chr2_2:48401162-48401181 | Msa0254820:three_prime_UTR | 20.0% |
| !!! | ATAGCTTTTCTAGTAATATT+TGG | - | chr2_2:48401403-48401422 | Msa0254820:CDS | 20.0% |
| !! | AGAATAGTATTTATAGATGA+AGG | - | chr2_2:48401982-48402001 | Msa0254820:intron | 20.0% |
| !!! | ATTTTCATTCATTTGTCTTA+CGG | - | chr2_2:48402058-48402077 | Msa0254820:intron | 20.0% |
| !!! | TGTCATATTTTAGTAAAGTT+AGG | - | chr2_2:48402939-48402958 | Msa0254820:intron | 20.0% |
| !!! | TATTTTAGTAAAGTTAGGAA+AGG | - | chr2_2:48402944-48402963 | Msa0254820:intron | 20.0% |
| !! | TGCAAATATAATCAAAAAAC+CGG | - | chr2_2:48403414-48403433 | Msa0254820:intron | 20.0% |
| !! | AGTTATTATTGAAAAAGTCT+AGG | + | chr2_2:48403708-48403727 | None:intergenic | 20.0% |
| !!! | GACTTTTTCAATAATAACTT+AGG | - | chr2_2:48403709-48403728 | Msa0254820:intron | 20.0% |
| !! | AGAAATAAAATAAGGCATAT+GGG | + | chr2_2:48403765-48403784 | None:intergenic | 20.0% |
| !! | ATATGAGCAGAAATAAAATA+AGG | + | chr2_2:48403773-48403792 | None:intergenic | 20.0% |
| !! | TTTAGTTAAATTTGAATCGA+TGG | - | chr2_2:48404625-48404644 | Msa0254820:intron | 20.0% |
| !! | TTAGTTAAATTTGAATCGAT+GGG | - | chr2_2:48404626-48404645 | Msa0254820:intron | 20.0% |
| !!! | TCCTTTTAAAAATGAATACA+CGG | + | chr2_2:48404796-48404815 | None:intergenic | 20.0% |
| !! | AAGAATGAAAAGTTAAATGA+GGG | + | chr2_2:48404898-48404917 | None:intergenic | 20.0% |
| !! | AAAGAATGAAAAGTTAAATG+AGG | + | chr2_2:48404899-48404918 | None:intergenic | 20.0% |
| !! | AATTTGATCGTTATAATATG+AGG | - | chr2_2:48405628-48405647 | Msa0254820:intron | 20.0% |
| !! | ATTTGATCGTTATAATATGA+GGG | - | chr2_2:48405629-48405648 | Msa0254820:intron | 20.0% |
| !! | GAAAATTTAGAATACCCATT+TGG | + | chr2_2:48401179-48401198 | None:intergenic | 25.0% |
| ! | TTGAACTACAATAAGCAAAA+AGG | + | chr2_2:48401204-48401223 | None:intergenic | 25.0% |
| ! | ATTTGTCTTCACTTATCAAA+TGG | - | chr2_2:48401325-48401344 | Msa0254820:CDS | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+AGG | + | chr2_2:48401429-48401448 | None:intergenic | 25.0% |
| !!! | TAAGTATTGATAAGCACTTA+TGG | + | chr2_2:48401465-48401484 | None:intergenic | 25.0% |
| !!! | TCTTTGTTTGTTTTTTCAGA+TGG | - | chr2_2:48401739-48401758 | Msa0254820:CDS | 25.0% |
| !!! | CTTTGTTTGTTTTTTCAGAT+GGG | - | chr2_2:48401740-48401759 | Msa0254820:CDS | 25.0% |
| ! | AATGTTCTTCAATTTGAGAA+TGG | - | chr2_2:48401763-48401782 | Msa0254820:CDS | 25.0% |
| ! | ATTTATAGATGAAGGTTATC+TGG | - | chr2_2:48401990-48402009 | Msa0254820:intron | 25.0% |
| ! | GTAAGACAAATGAATGAAAA+TGG | + | chr2_2:48402059-48402078 | None:intergenic | 25.0% |
| ! | TGGAAAAGAATTGAAGTTAA+AGG | - | chr2_2:48402985-48403004 | Msa0254820:intron | 25.0% |
| ! | GGAAAAGAATTGAAGTTAAA+GGG | - | chr2_2:48402986-48403005 | Msa0254820:intron | 25.0% |
| ! | ATTAAACAGTTACCCAAAAA+CGG | + | chr2_2:48403158-48403177 | None:intergenic | 25.0% |
| !!! | TTTTTGGGTAACTGTTTAAT+TGG | - | chr2_2:48403158-48403177 | Msa0254820:intron | 25.0% |
| !!! | TTTTGGGTAACTGTTTAATT+GGG | - | chr2_2:48403159-48403178 | Msa0254820:intron | 25.0% |
| ! | CAGAAATAAAATAAGGCATA+TGG | + | chr2_2:48403766-48403785 | None:intergenic | 25.0% |
| ! | AGGTAAACTTAGGAATTAAA+TGG | + | chr2_2:48403801-48403820 | None:intergenic | 25.0% |
| ! | ATGATCCCATTTCAAATATA+AGG | - | chr2_2:48403954-48403973 | Msa0254820:intron | 25.0% |
| ! | TGATCCCATTTCAAATATAA+GGG | - | chr2_2:48403955-48403974 | Msa0254820:intron | 25.0% |
| !! | TGTTCCCTTATATTTGAAAT+GGG | + | chr2_2:48403962-48403981 | None:intergenic | 25.0% |
| ! | ATGTTCCCTTATATTTGAAA+TGG | + | chr2_2:48403963-48403982 | None:intergenic | 25.0% |
| !! | AAATATAAGGGAACATCTTT+TGG | - | chr2_2:48403967-48403986 | Msa0254820:intron | 25.0% |
| ! | TTTAGAGAAGTGAAAACAAT+GGG | - | chr2_2:48404189-48404208 | Msa0254820:intron | 25.0% |
| ! | TCGTATATTTACAAATTCTG+TGG | + | chr2_2:48404427-48404446 | None:intergenic | 25.0% |
| ! | TGATGTAACCTAAGTTATAA+TGG | - | chr2_2:48404475-48404494 | Msa0254820:CDS | 25.0% |
| !!! | GGTAAGATTTACTTATTTTC+CGG | - | chr2_2:48404685-48404704 | Msa0254820:intron | 25.0% |
| !!! | ACCGTGTATTCATTTTTAAA+AGG | - | chr2_2:48404792-48404811 | Msa0254820:CDS | 25.0% |
| !! | TTCCATTATTGTCAAACTTT+TGG | - | chr2_2:48404839-48404858 | Msa0254820:CDS | 25.0% |
| !! | TCCATTATTGTCAAACTTTT+GGG | - | chr2_2:48404840-48404859 | Msa0254820:CDS | 25.0% |
| ! | TTATGAAATAGCATCTTCTT+TGG | - | chr2_2:48404921-48404940 | Msa0254820:intron | 25.0% |
| ! | TATGAAATAGCATCTTCTTT+GGG | - | chr2_2:48404922-48404941 | Msa0254820:intron | 25.0% |
| !! | CTATGAAAGTGTAAATATCA+AGG | + | chr2_2:48404948-48404967 | None:intergenic | 25.0% |
| !! | CTGTTAAATTTGAAATGTGA+GGG | + | chr2_2:48405201-48405220 | None:intergenic | 25.0% |
| ! | TTCGATTTAGCATATGATAA+TGG | + | chr2_2:48405486-48405505 | None:intergenic | 25.0% |
| !! | TAAAGTTGTGTTCTTAGTTT+TGG | - | chr2_2:48405923-48405942 | Msa0254820:CDS | 25.0% |
| ! | TATATTATGCAGGAAATCAA+TGG | - | chr2_2:48406162-48406181 | Msa0254820:five_prime_UTR | 25.0% |
| !!! | GAAAGTGAATTAGTTTTTCG+AGG | + | chr2_2:48400849-48400868 | None:intergenic | 30.0% |
| TAATTCACTTTCCACGTAAA+TGG | - | chr2_2:48400857-48400876 | Msa0254820:three_prime_UTR | 30.0% | |
| !!! | ACTTTGTTTTTCCATTTACG+TGG | + | chr2_2:48400871-48400890 | None:intergenic | 30.0% |
| ! | CTTAGTTTGAGAAGAAGTTA+TGG | + | chr2_2:48401001-48401020 | None:intergenic | 30.0% |
| TTGAAAATGGAGAGAGAAAA+TGG | + | chr2_2:48401082-48401101 | None:intergenic | 30.0% | |
| ATTGAAGTAGTTGAGGAAAT+GGG | + | chr2_2:48401144-48401163 | None:intergenic | 30.0% | |
| AATTGAAGTAGTTGAGGAAA+TGG | + | chr2_2:48401145-48401164 | None:intergenic | 30.0% | |
| ATGGAAAATTGAAGTAGTTG+AGG | + | chr2_2:48401151-48401170 | None:intergenic | 30.0% | |
| GAATACCCATTTGGTAAAAA+TGG | + | chr2_2:48401170-48401189 | None:intergenic | 30.0% | |
| ATTGTAGTTCAATTCCAAAC+TGG | - | chr2_2:48401212-48401231 | Msa0254820:three_prime_UTR | 30.0% | |
| TTGTAGTTCAATTCCAAACT+GGG | - | chr2_2:48401213-48401232 | Msa0254820:three_prime_UTR | 30.0% | |
| AAATGAAAACATACCCAGTT+TGG | + | chr2_2:48401229-48401248 | None:intergenic | 30.0% | |
| GAAGACAAATGCTTAATCAA+TGG | + | chr2_2:48401315-48401334 | None:intergenic | 30.0% | |
| !! | TAGTAATATTTGGCCTTGTT+TGG | - | chr2_2:48401413-48401432 | Msa0254820:CDS | 30.0% |
| ! | AAGCTATTCTAGAGAACTTA+TGG | - | chr2_2:48401544-48401563 | Msa0254820:CDS | 30.0% |
| AGATTGGAGTTATACCTTAT+CGG | - | chr2_2:48401818-48401837 | Msa0254820:CDS | 30.0% | |
| ATAAAGTCAAGAGAACAAAC+AGG | + | chr2_2:48401943-48401962 | None:intergenic | 30.0% | |
| GGATTACTTCTTAATTTCGT+CGG | - | chr2_2:48402079-48402098 | Msa0254820:intron | 30.0% | |
| ! | TTTTCACCATTCTCATTTCA+CGG | + | chr2_2:48402336-48402355 | None:intergenic | 30.0% |
| TGAAATGAGAATGGTGAAAA+AGG | - | chr2_2:48402336-48402355 | Msa0254820:intron | 30.0% | |
| ATTTCGATGTGGTATATGTT+CGG | - | chr2_2:48402472-48402491 | Msa0254820:intron | 30.0% | |
| !!! | CGGAAGTTTTTATTTTTCAG+TGG | + | chr2_2:48402721-48402740 | None:intergenic | 30.0% |
| TCAAACCAGAACTTTAACAT+CGG | + | chr2_2:48402764-48402783 | None:intergenic | 30.0% | |
| ATGCATACAAACAGAATGAA+AGG | - | chr2_2:48402798-48402817 | Msa0254820:intron | 30.0% | |
| ! | GTATTTTCGTCTTTTCTTCA+TGG | + | chr2_2:48402851-48402870 | None:intergenic | 30.0% |
| GTTAATTGTATCACTGTATG+TGG | - | chr2_2:48402876-48402895 | Msa0254820:intron | 30.0% | |
| GGTAGTAACTATGATAGAAT+TGG | - | chr2_2:48402965-48402984 | Msa0254820:intron | 30.0% | |
| ATTTATTTGCTCAACTCACT+AGG | - | chr2_2:48403843-48403862 | Msa0254820:intron | 30.0% | |
| TCAAACACATGTTCGATAAA+TGG | - | chr2_2:48404019-48404038 | Msa0254820:intron | 30.0% | |
| ACTTAGATAACTTCTCTGAT+AGG | + | chr2_2:48404056-48404075 | None:intergenic | 30.0% | |
| TGGATCTGATTCTTCTTTAT+CGG | - | chr2_2:48404094-48404113 | Msa0254820:intron | 30.0% | |
| GTTTAGAGAAGTGAAAACAA+TGG | - | chr2_2:48404188-48404207 | Msa0254820:intron | 30.0% | |
| ATGGACTCGAATCAATTAAT+TGG | + | chr2_2:48404285-48404304 | None:intergenic | 30.0% | |
| ATCTGCAGAAAAACACAAAA+TGG | + | chr2_2:48404304-48404323 | None:intergenic | 30.0% | |
| !!! | TACTGTTTTTGAGAAGAAAG+AGG | + | chr2_2:48404394-48404413 | None:intergenic | 30.0% |
| TGTAACCTAAGTTATAATGG+AGG | - | chr2_2:48404478-48404497 | Msa0254820:CDS | 30.0% | |
| ! | GTAACCTAAGTTATAATGGA+GGG | - | chr2_2:48404479-48404498 | Msa0254820:CDS | 30.0% |
| ! | TATAATCACTCCAGATGTTT+TGG | + | chr2_2:48404557-48404576 | None:intergenic | 30.0% |
| ATTATTCTAGTCAAGGATGA+GGG | + | chr2_2:48404661-48404680 | None:intergenic | 30.0% | |
| ! | TTCTCAAGTAATCTGGAATT+CGG | + | chr2_2:48404711-48404730 | None:intergenic | 30.0% |
| ! | CCATTATTGTCAAACTTTTG+GGG | - | chr2_2:48404841-48404860 | Msa0254820:CDS | 30.0% |
| AAGGGATATCTTAGAAAGAT+CGG | + | chr2_2:48405145-48405164 | None:intergenic | 30.0% | |
| ! | GCTGTTAAATTTGAAATGTG+AGG | + | chr2_2:48405202-48405221 | None:intergenic | 30.0% |
| CACATTTCAAATTTAACAGC+CGG | - | chr2_2:48405202-48405221 | Msa0254820:CDS | 30.0% | |
| !! | GTAGTTTTCCTTTTGACTAA+TGG | + | chr2_2:48405288-48405307 | None:intergenic | 30.0% |
| CTTTGCTTCTGAATATTTCT+CGG | + | chr2_2:48405367-48405386 | None:intergenic | 30.0% | |
| AGTGCACATATTCGATATAA+TGG | + | chr2_2:48405739-48405758 | None:intergenic | 30.0% | |
| !! | CACAACTTTAAAACTCATGA+GGG | + | chr2_2:48405913-48405932 | None:intergenic | 30.0% |
| !! | ACACAACTTTAAAACTCATG+AGG | + | chr2_2:48405914-48405933 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGGATTTGAATCC+AGG | - | chr2_2:48405936-48405955 | Msa0254820:CDS | 30.0% |
| TATGCATCAGTCAATATCAT+AGG | - | chr2_2:48406032-48406051 | Msa0254820:five_prime_UTR | 30.0% | |
| !!! | GTGAATTAGTTTTTCGAGGA+GGG | + | chr2_2:48400845-48400864 | None:intergenic | 35.0% |
| !!! | AGTGAATTAGTTTTTCGAGG+AGG | + | chr2_2:48400846-48400865 | None:intergenic | 35.0% |
| CTTCACTTATCAAATGGACA+AGG | - | chr2_2:48401331-48401350 | Msa0254820:CDS | 35.0% | |
| GCATAACCATGGATGATAAA+GGG | - | chr2_2:48402217-48402236 | Msa0254820:intron | 35.0% | |
| AACATTCCCTTTATCATCCA+TGG | + | chr2_2:48402226-48402245 | None:intergenic | 35.0% | |
| AATCTTGCCATCAGAAAGAT+TGG | - | chr2_2:48402264-48402283 | Msa0254820:intron | 35.0% | |
| GTTCTCTAATGATTTCGATG+TGG | - | chr2_2:48402461-48402480 | Msa0254820:intron | 35.0% | |
| TCGGAAAATTATTCTTGACC+AGG | - | chr2_2:48402539-48402558 | Msa0254820:intron | 35.0% | |
| GAAAATTATTCTTGACCAGG+AGG | - | chr2_2:48402542-48402561 | Msa0254820:intron | 35.0% | |
| ! | TCTAGTTCAATTTCAAGCAC+AGG | - | chr2_2:48402579-48402598 | Msa0254820:intron | 35.0% |
| TGATTCCGATGTTAAAGTTC+TGG | - | chr2_2:48402756-48402775 | Msa0254820:intron | 35.0% | |
| TGTAAGAGAGCAAAACGAAA+AGG | - | chr2_2:48403188-48403207 | Msa0254820:intron | 35.0% | |
| GTAAGAGAGCAAAACGAAAA+GGG | - | chr2_2:48403189-48403208 | Msa0254820:intron | 35.0% | |
| !! | CATTTTGAAAGGTGAGTTTC+TGG | - | chr2_2:48403285-48403304 | Msa0254820:intron | 35.0% |
| !! | GTTTCTGGTTCATTTCATTG+TGG | - | chr2_2:48403300-48403319 | Msa0254820:intron | 35.0% |
| ! | ATTTTCCAACTATCATGGGT+CGG | + | chr2_2:48403346-48403365 | None:intergenic | 35.0% |
| ! | GCACATTTTCCAACTATCAT+GGG | + | chr2_2:48403350-48403369 | None:intergenic | 35.0% |
| ! | AGCACATTTTCCAACTATCA+TGG | + | chr2_2:48403351-48403370 | None:intergenic | 35.0% |
| AAAAAACCGGAAAGATCTCA+TGG | - | chr2_2:48403427-48403446 | Msa0254820:intron | 35.0% | |
| ! | TAAGAAGAGAGAAGGCTTTT+TGG | - | chr2_2:48403537-48403556 | Msa0254820:intron | 35.0% |
| ! | AAGAAGAGAGAAGGCTTTTT+GGG | - | chr2_2:48403538-48403557 | Msa0254820:intron | 35.0% |
| ATAGAAAGTTTGAGCTATGC+AGG | + | chr2_2:48403821-48403840 | None:intergenic | 35.0% | |
| CTCACTAGGACATTATCATT+TGG | - | chr2_2:48403857-48403876 | Msa0254820:intron | 35.0% | |
| TTTGGCAAACAAATGCATTG+TGG | - | chr2_2:48403875-48403894 | Msa0254820:intron | 35.0% | |
| GGATCATAAGAGTTGAACTT+GGG | + | chr2_2:48403941-48403960 | None:intergenic | 35.0% | |
| CACATGTTCGATAAATGGAA+AGG | - | chr2_2:48404024-48404043 | Msa0254820:intron | 35.0% | |
| GTTTGATATGCTGTTCTTGT+TGG | - | chr2_2:48404074-48404093 | Msa0254820:intron | 35.0% | |
| GCAGATATCCTTATAGTTGT+TGG | - | chr2_2:48404318-48404337 | Msa0254820:intron | 35.0% | |
| AAACAGCACCAACAACTATA+AGG | + | chr2_2:48404329-48404348 | None:intergenic | 35.0% | |
| !!! | TATAGTTGTTGGTGCTGTTT+TGG | - | chr2_2:48404329-48404348 | Msa0254820:intron | 35.0% |
| AGTACCCTCCATTATAACTT+AGG | + | chr2_2:48404486-48404505 | None:intergenic | 35.0% | |
| ! | TAAGTTATAATGGAGGGTAC+TGG | - | chr2_2:48404485-48404504 | Msa0254820:CDS | 35.0% |
| !! | AAGTTATAATGGAGGGTACT+GGG | - | chr2_2:48404486-48404505 | Msa0254820:CDS | 35.0% |
| !! | GGTACTGGGTAATGTTATTT+TGG | - | chr2_2:48404500-48404519 | Msa0254820:CDS | 35.0% |
| GATTATTCTAGTCAAGGATG+AGG | + | chr2_2:48404662-48404681 | None:intergenic | 35.0% | |
| TCCTTGACTAGAATAATCGT+AGG | - | chr2_2:48404664-48404683 | Msa0254820:intron | 35.0% | |
| ACCTACGATTATTCTAGTCA+AGG | + | chr2_2:48404668-48404687 | None:intergenic | 35.0% | |
| CCCCAAAAGTTTGACAATAA+TGG | + | chr2_2:48404844-48404863 | None:intergenic | 35.0% | |
| !!! | TGTTCATATTTTGACCATGC+TGG | - | chr2_2:48404981-48405000 | Msa0254820:intron | 35.0% |
| TAAATGACACAGAGATCATC+AGG | - | chr2_2:48405021-48405040 | Msa0254820:CDS | 35.0% | |
| TCATCAGGACAAGAGTTTAA+AGG | - | chr2_2:48405036-48405055 | Msa0254820:CDS | 35.0% | |
| CATCAGGACAAGAGTTTAAA+GGG | - | chr2_2:48405037-48405056 | Msa0254820:CDS | 35.0% | |
| GCAATAAGTTGTCCAAAAGA+TGG | + | chr2_2:48405123-48405142 | None:intergenic | 35.0% | |
| TAAGATATCCCTTGAAGCTT+TGG | - | chr2_2:48405152-48405171 | Msa0254820:CDS | 35.0% | |
| AAATTTAACAGCCGGAATAC+CGG | - | chr2_2:48405210-48405229 | Msa0254820:CDS | 35.0% | |
| !! | GTTTTCCTTTTGACTAATGG+AGG | + | chr2_2:48405285-48405304 | None:intergenic | 35.0% |
| ! | CTATTTTCGGTAACAGTAAC+AGG | + | chr2_2:48405312-48405331 | None:intergenic | 35.0% |
| CTGTTACTGTTACCGAAAAT+AGG | - | chr2_2:48405310-48405329 | Msa0254820:intron | 35.0% | |
| TTCTGAATATTTCTCGGCAA+TGG | + | chr2_2:48405361-48405380 | None:intergenic | 35.0% | |
| TCCATAGAATTCAGCATACT+CGG | + | chr2_2:48405451-48405470 | None:intergenic | 35.0% | |
| TATGCTGAATTCTATGGATC+TGG | - | chr2_2:48405453-48405472 | Msa0254820:intron | 35.0% | |
| !!! | GAAGTTGTTTTTCCGACAAA+TGG | - | chr2_2:48405552-48405571 | Msa0254820:intron | 35.0% |
| CTTGTTACTGAGAGTTGAAT+CGG | + | chr2_2:48405680-48405699 | None:intergenic | 35.0% | |
| ATCACAACTCACAAGTGATT+CGG | + | chr2_2:48405833-48405852 | None:intergenic | 35.0% | |
| TTCAACTTAACCAAAAGTCC+TGG | + | chr2_2:48405957-48405976 | None:intergenic | 35.0% | |
| TCATAGGTTTCTGTTTGCAA+TGG | - | chr2_2:48406048-48406067 | Msa0254820:five_prime_UTR | 35.0% | |
| CATAGGTTTCTGTTTGCAAT+GGG | - | chr2_2:48406049-48406068 | Msa0254820:five_prime_UTR | 35.0% | |
| CAATTTAGTCACAACATGCT+GGG | + | chr2_2:48406110-48406129 | None:intergenic | 35.0% | |
| !!! | TTAGTTTTTCGAGGAGGGTA+GGG | + | chr2_2:48400840-48400859 | None:intergenic | 40.0% |
| !!! | ATTAGTTTTTCGAGGAGGGT+AGG | + | chr2_2:48400841-48400860 | None:intergenic | 40.0% |
| TGAGAAGAAGTTATGGCAAG+TGG | + | chr2_2:48400994-48401013 | None:intergenic | 40.0% | |
| AAGTAGTTGAGGAAATGGGT+TGG | + | chr2_2:48401140-48401159 | None:intergenic | 40.0% | |
| AATGAAGAATGACCTGAGTG+TGG | + | chr2_2:48401375-48401394 | None:intergenic | 40.0% | |
| TTATGTAGTTGAGACTGTCG+TGG | - | chr2_2:48401786-48401805 | Msa0254820:CDS | 40.0% | |
| ! | AGAGGATGGTGAACTTTTTG+CGG | - | chr2_2:48401855-48401874 | Msa0254820:CDS | 40.0% |
| ! | TGGCAAGTTAAGCACAGTTT+TGG | - | chr2_2:48402010-48402029 | Msa0254820:intron | 40.0% |
| TATGCTATTGCAGATAGCAG+AGG | - | chr2_2:48402111-48402130 | Msa0254820:intron | 40.0% | |
| ATGGAAAACCTAGTGATGCT+CGG | - | chr2_2:48402178-48402197 | Msa0254820:intron | 40.0% | |
| TGATTAAACCGAGCATCACT+AGG | + | chr2_2:48402189-48402208 | None:intergenic | 40.0% | |
| TCATCCATGGTTATGCCTTT+GGG | + | chr2_2:48402213-48402232 | None:intergenic | 40.0% | |
| ATCATCCATGGTTATGCCTT+TGG | + | chr2_2:48402214-48402233 | None:intergenic | 40.0% | |
| GGCATAACCATGGATGATAA+AGG | - | chr2_2:48402216-48402235 | Msa0254820:intron | 40.0% | |
| AGCATCTCCAATCTTTCTGA+TGG | + | chr2_2:48402274-48402293 | None:intergenic | 40.0% | |
| ATCAGAAAGATTGGAGATGC+TGG | - | chr2_2:48402273-48402292 | Msa0254820:intron | 40.0% | |
| CATTGTCCGTGAAATGAGAA+TGG | - | chr2_2:48402327-48402346 | Msa0254820:intron | 40.0% | |
| ! | ATTTGACTTTCCTCCAGCTA+TGG | + | chr2_2:48402403-48402422 | None:intergenic | 40.0% |
| ATCAATGACCAACAAGGAAC+AGG | + | chr2_2:48402502-48402521 | None:intergenic | 40.0% | |
| TCCTTGTTGGTCATTGATAG+AGG | - | chr2_2:48402504-48402523 | Msa0254820:intron | 40.0% | |
| TCCTCTATCAATGACCAACA+AGG | + | chr2_2:48402508-48402527 | None:intergenic | 40.0% | |
| ATAGAGGAAATGCTGCTCTT+CGG | - | chr2_2:48402520-48402539 | Msa0254820:intron | 40.0% | |
| TCGGAATCACATGTTGCAAA+GGG | + | chr2_2:48402745-48402764 | None:intergenic | 40.0% | |
| ATCGGAATCACATGTTGCAA+AGG | + | chr2_2:48402746-48402765 | None:intergenic | 40.0% | |
| ! | GTCTTTTCTTCATGGCTGAT+TGG | + | chr2_2:48402843-48402862 | None:intergenic | 40.0% |
| ATCGTGGGTTCTGTCAATAA+AGG | + | chr2_2:48403015-48403034 | None:intergenic | 40.0% | |
| ATCACTGTACATCGTTACCA+TGG | + | chr2_2:48403051-48403070 | None:intergenic | 40.0% | |
| ATAGTTGAAACTCTCGTCCT+AGG | - | chr2_2:48403094-48403113 | Msa0254820:intron | 40.0% | |
| ! | TCAAAACCCAGATCCGTTTT+TGG | - | chr2_2:48403142-48403161 | Msa0254820:intron | 40.0% |
| !! | CAAAACCCAGATCCGTTTTT+GGG | - | chr2_2:48403143-48403162 | Msa0254820:intron | 40.0% |
| AGTTACCCAAAAACGGATCT+GGG | + | chr2_2:48403151-48403170 | None:intergenic | 40.0% | |
| AGTAGTAATAGAGCTACGAG+AGG | - | chr2_2:48403232-48403251 | Msa0254820:intron | 40.0% | |
| GTAGTAATAGAGCTACGAGA+GGG | - | chr2_2:48403233-48403252 | Msa0254820:intron | 40.0% | |
| ! | TCTGGTTCATTTCATTGTGG+TGG | - | chr2_2:48403303-48403322 | Msa0254820:intron | 40.0% |
| TTTCTTCTGATCGATGAGCA+TGG | - | chr2_2:48403473-48403492 | Msa0254820:intron | 40.0% | |
| AATTTCCACGTGTGTGTAGT+TGG | - | chr2_2:48403620-48403639 | Msa0254820:intron | 40.0% | |
| TGTTGACCGAGTCAAAATCA+TGG | - | chr2_2:48403647-48403666 | Msa0254820:intron | 40.0% | |
| GTTGACCGAGTCAAAATCAT+GGG | - | chr2_2:48403648-48403667 | Msa0254820:intron | 40.0% | |
| TTGACCGAGTCAAAATCATG+GGG | - | chr2_2:48403649-48403668 | Msa0254820:intron | 40.0% | |
| TGTGCAAAAGGGCTAAAGTT+AGG | - | chr2_2:48403680-48403699 | Msa0254820:intron | 40.0% | |
| GTGCAAAAGGGCTAAAGTTA+GGG | - | chr2_2:48403681-48403700 | Msa0254820:intron | 40.0% | |
| TGCAAAAGGGCTAAAGTTAG+GGG | - | chr2_2:48403682-48403701 | Msa0254820:intron | 40.0% | |
| TAAGGCATATGGGATGTCTA+AGG | + | chr2_2:48403755-48403774 | None:intergenic | 40.0% | |
| TGAGCTATGCAGGTAAACTT+AGG | + | chr2_2:48403811-48403830 | None:intergenic | 40.0% | |
| TAAGAGTTGAACTTGGGAGT+TGG | + | chr2_2:48403935-48403954 | None:intergenic | 40.0% | |
| GGGATCATAAGAGTTGAACT+TGG | + | chr2_2:48403942-48403961 | None:intergenic | 40.0% | |
| ACCTACAAATCTAGTCCATG+TGG | + | chr2_2:48403993-48404012 | None:intergenic | 40.0% | |
| !!! | TGTTTTGGCACATCAAGAAG+CGG | + | chr2_2:48404542-48404561 | None:intergenic | 40.0% |
| TCTTGATGTGCCAAAACATC+TGG | - | chr2_2:48404544-48404563 | Msa0254820:CDS | 40.0% | |
| TGCAAGTAGTTCAAACCAAG+TGG | - | chr2_2:48404580-48404599 | Msa0254820:CDS | 40.0% | |
| AGTAGTTCAAACCAAGTGGT+TGG | - | chr2_2:48404584-48404603 | Msa0254820:CDS | 40.0% | |
| CAGATTACTTGAGAACCAGA+GGG | - | chr2_2:48404716-48404735 | Msa0254820:intron | 40.0% | |
| TGGAGACAAAAGAAACTGCA+AGG | - | chr2_2:48404739-48404758 | Msa0254820:CDS | 40.0% | |
| !!! | TTGTCAAACTTTTGGGGTTG+TGG | - | chr2_2:48404847-48404866 | Msa0254820:CDS | 40.0% |
| !!! | TGTCAAACTTTTGGGGTTGT+GGG | - | chr2_2:48404848-48404867 | Msa0254820:CDS | 40.0% |
| AGTGTAATTAGCAACCAGCA+TGG | + | chr2_2:48404998-48405017 | None:intergenic | 40.0% | |
| ATCACAAAACGATCCTTCAG+CGG | + | chr2_2:48405243-48405262 | None:intergenic | 40.0% | |
| ! | CTGTGGCATTTGCCTATTTT+CGG | + | chr2_2:48405325-48405344 | None:intergenic | 40.0% |
| GAATATTTCTCGGCAATGGT+TGG | + | chr2_2:48405357-48405376 | None:intergenic | 40.0% | |
| AAACTGCTCGATTTCACCTT+TGG | + | chr2_2:48405393-48405412 | None:intergenic | 40.0% | |
| ! | TTGAAGATCGGTGCTTACTA+GGG | + | chr2_2:48405422-48405441 | None:intergenic | 40.0% |
| ! | TTTGAAGATCGGTGCTTACT+AGG | + | chr2_2:48405423-48405442 | None:intergenic | 40.0% |
| !!! | ACTCGGATCGTTTTGAAGAT+CGG | + | chr2_2:48405434-48405453 | None:intergenic | 40.0% |
| TCCGAGTATGCTGAATTCTA+TGG | - | chr2_2:48405447-48405466 | Msa0254820:intron | 40.0% | |
| TGAATTCTATGGATCTGGTG+AGG | - | chr2_2:48405458-48405477 | Msa0254820:intron | 40.0% | |
| AATCGAAGAGCCAGAAAGAA+CGG | - | chr2_2:48405499-48405518 | Msa0254820:intron | 40.0% | |
| GATCGTTATAATATGAGGGC+TGG | - | chr2_2:48405633-48405652 | Msa0254820:intron | 40.0% | |
| TTACTGAGAGTTGAATCGGA+AGG | + | chr2_2:48405676-48405695 | None:intergenic | 40.0% | |
| TATGGGTCAACATTAAGCAC+AGG | + | chr2_2:48405810-48405829 | None:intergenic | 40.0% | |
| !! | ACTCACAAGTGATTCGGTAT+GGG | + | chr2_2:48405827-48405846 | None:intergenic | 40.0% |
| !! | AACTCACAAGTGATTCGGTA+TGG | + | chr2_2:48405828-48405847 | None:intergenic | 40.0% |
| TCATACCCAGCTTCATAAGT+GGG | + | chr2_2:48405868-48405887 | None:intergenic | 40.0% | |
| ! | GAAAGTTTTTGCGTCCATTG+TGG | + | chr2_2:48405891-48405910 | None:intergenic | 40.0% |
| ! | GGATTTGAATCCAGGACTTT+TGG | - | chr2_2:48405944-48405963 | Msa0254820:CDS | 40.0% |
| TTGGAGTCGCAATTTCTGTT+TGG | - | chr2_2:48406007-48406026 | Msa0254820:five_prime_UTR | 40.0% | |
| GCAATTTAGTCACAACATGC+TGG | + | chr2_2:48406111-48406130 | None:intergenic | 40.0% | |
| GGAGAGAGAAAATGGAAGCA+AGG | + | chr2_2:48401074-48401093 | None:intergenic | 45.0% | |
| !! | CAGCGTGAGTTGGTTGAAAA+TGG | + | chr2_2:48401095-48401114 | None:intergenic | 45.0% |
| TGGTTGTGTTAGTTACCTGC+AGG | + | chr2_2:48401120-48401139 | None:intergenic | 45.0% | |
| TGAGTGTGGTGTCTTAGTAG+TGG | + | chr2_2:48401361-48401380 | None:intergenic | 45.0% | |
| ACTACTAAGACACCACACTC+AGG | - | chr2_2:48401360-48401379 | Msa0254820:CDS | 45.0% | |
| GTCGTGGAAGGAAATGAGAT+TGG | - | chr2_2:48401802-48401821 | Msa0254820:CDS | 45.0% | |
| TCAGAAACACGGATCCGATA+AGG | + | chr2_2:48401835-48401854 | None:intergenic | 45.0% | |
| ! | ATCCGTGTTTCTGAAGAGGA+TGG | - | chr2_2:48401841-48401860 | Msa0254820:CDS | 45.0% |
| CACCATCCTCTTCAGAAACA+CGG | + | chr2_2:48401846-48401865 | None:intergenic | 45.0% | |
| ACCACCACTTTCTCAGTGTA+TGG | - | chr2_2:48401912-48401931 | Msa0254820:CDS | 45.0% | |
| TGCAGATAGCAGAGGAAGAT+TGG | - | chr2_2:48402119-48402138 | Msa0254820:intron | 45.0% | |
| ! | ATTGGTAGCTGGGTCATTTC+AGG | - | chr2_2:48402137-48402156 | Msa0254820:intron | 45.0% |
| ! | TTGGTAGCTGGGTCATTTCA+GGG | - | chr2_2:48402138-48402157 | Msa0254820:intron | 45.0% |
| GCTCGGTTTAATCATCCCAA+AGG | - | chr2_2:48402195-48402214 | Msa0254820:intron | 45.0% | |
| ! | TCATCCCAAAGGCATAACCA+TGG | - | chr2_2:48402206-48402225 | Msa0254820:intron | 45.0% |
| TTAGGTGTGACTACCATAGC+TGG | - | chr2_2:48402387-48402406 | Msa0254820:intron | 45.0% | |
| GGAGGAAAGTCAAATGTTGC+TGG | - | chr2_2:48402408-48402427 | Msa0254820:intron | 45.0% | |
| ! | AGTCAAATGTTGCTGGCTAC+AGG | - | chr2_2:48402415-48402434 | Msa0254820:intron | 45.0% |
| ! | GTCAAATGTTGCTGGCTACA+GGG | - | chr2_2:48402416-48402435 | Msa0254820:intron | 45.0% |
| GAGAACTTAGCATCCTCACT+AGG | + | chr2_2:48402447-48402466 | None:intergenic | 45.0% | |
| ATGACCAACAAGGAACAGGT+TGG | + | chr2_2:48402498-48402517 | None:intergenic | 45.0% | |
| ! | ATTGATAATCGCAGTCCTCC+TGG | + | chr2_2:48402560-48402579 | None:intergenic | 45.0% |
| AATCACATGTTGCAAAGGGG+CGG | + | chr2_2:48402741-48402760 | None:intergenic | 45.0% | |
| CGGAATCACATGTTGCAAAG+GGG | + | chr2_2:48402744-48402763 | None:intergenic | 45.0% | |
| GGCACTTATTCAGAGATCGT+GGG | + | chr2_2:48403030-48403049 | None:intergenic | 45.0% | |
| TGGCACTTATTCAGAGATCG+TGG | + | chr2_2:48403031-48403050 | None:intergenic | 45.0% | |
| CGATCTCTGAATAAGTGCCA+TGG | - | chr2_2:48403031-48403050 | Msa0254820:intron | 45.0% | |
| CTAGGTATTCGAGAGCGAAA+CGG | - | chr2_2:48403112-48403131 | Msa0254820:intron | 45.0% | |
| TAGGTATTCGAGAGCGAAAC+GGG | - | chr2_2:48403113-48403132 | Msa0254820:intron | 45.0% | |
| CAGTTACCCAAAAACGGATC+TGG | + | chr2_2:48403152-48403171 | None:intergenic | 45.0% | |
| ! | AGTTGGAAAATGTGCTGCTG+AGG | - | chr2_2:48403355-48403374 | Msa0254820:intron | 45.0% |
| TCCTCTCCATGAGATCTTTC+CGG | + | chr2_2:48403436-48403455 | None:intergenic | 45.0% | |
| AGTTGCGTCGAGAATGTTGT+TGG | - | chr2_2:48403503-48403522 | Msa0254820:intron | 45.0% | |
| AGAATGTTGTTGGCAGTGGT+GGG | - | chr2_2:48403513-48403532 | Msa0254820:intron | 45.0% | |
| !! | TGGTGGGTTAAGAAGAGAGA+AGG | - | chr2_2:48403529-48403548 | Msa0254820:intron | 45.0% |
| TGACCGAGTCAAAATCATGG+GGG | - | chr2_2:48403650-48403669 | Msa0254820:intron | 45.0% | |
| ! | TTAGCCCTTTTGCACAAGTC+TGG | + | chr2_2:48403676-48403695 | None:intergenic | 45.0% |
| ! | GGATGTCTAAGGTTAGCAAG+AGG | + | chr2_2:48403744-48403763 | None:intergenic | 45.0% |
| TGCATTGTGGTGCTTGATCT+TGG | - | chr2_2:48403888-48403907 | Msa0254820:intron | 45.0% | |
| !! | GCCACATGGACTAGATTTGT+AGG | - | chr2_2:48403989-48404008 | Msa0254820:intron | 45.0% |
| !!! | GTTGTTGGTGCTGTTTTGGT+TGG | - | chr2_2:48404333-48404352 | Msa0254820:intron | 45.0% |
| ACTACTTGAGTCCAACCACT+TGG | + | chr2_2:48404598-48404617 | None:intergenic | 45.0% | |
| TTCTAGTCAAGGATGAGGGT+CGG | + | chr2_2:48404657-48404676 | None:intergenic | 45.0% | |
| ! | CAAGTAATCTGGAATTCGGC+CGG | + | chr2_2:48404707-48404726 | None:intergenic | 45.0% |
| !! | CCTCTGGTTCTCAAGTAATC+TGG | + | chr2_2:48404718-48404737 | None:intergenic | 45.0% |
| CCAGATTACTTGAGAACCAG+AGG | - | chr2_2:48404715-48404734 | Msa0254820:intron | 45.0% | |
| ATTACTTGAGAACCAGAGGG+TGG | - | chr2_2:48404719-48404738 | Msa0254820:CDS | 45.0% | |
| ! | TTTCTTTTGTCTCCACCCTC+TGG | + | chr2_2:48404734-48404753 | None:intergenic | 45.0% |
| !!! | GTCAAACTTTTGGGGTTGTG+GGG | - | chr2_2:48404849-48404868 | Msa0254820:CDS | 45.0% |
| GGGTTGTGGGGAAGAAAAAA+GGG | - | chr2_2:48404861-48404880 | Msa0254820:CDS | 45.0% | |
| TTGTCCAAAAGATGGCCATC+CGG | + | chr2_2:48405115-48405134 | None:intergenic | 45.0% | |
| ! | ATATCCCTTGAAGCTTTGGC+TGG | - | chr2_2:48405156-48405175 | Msa0254820:CDS | 45.0% |
| TCCAGCCTCCATTAGTCAAA+AGG | - | chr2_2:48405277-48405296 | Msa0254820:intron | 45.0% | |
| !! | TCCTTTTGACTAATGGAGGC+TGG | + | chr2_2:48405281-48405300 | None:intergenic | 45.0% |
| CGAAAATAGGCAAATGCCAC+AGG | - | chr2_2:48405323-48405342 | Msa0254820:intron | 45.0% | |
| ATGGTTGGAGTATGTACCTG+TGG | + | chr2_2:48405342-48405361 | None:intergenic | 45.0% | |
| TTCAGAAGCAAAGCCTCCAA+AGG | - | chr2_2:48405374-48405393 | Msa0254820:intron | 45.0% | |
| GGTGAAATCGAGCAGTTTCA+AGG | - | chr2_2:48405395-48405414 | Msa0254820:intron | 45.0% | |
| AGAAAGAACGGCCTAGACAT+CGG | - | chr2_2:48405511-48405530 | Msa0254820:intron | 45.0% | |
| ! | CAACTTCTCCGCTCTTTTCT+CGG | + | chr2_2:48405539-48405558 | None:intergenic | 45.0% |
| ! | TTTTCCGACAAATGGAGCTG+AGG | - | chr2_2:48405560-48405579 | Msa0254820:intron | 45.0% |
| TTAGCCTCAGCTCCATTTGT+CGG | + | chr2_2:48405567-48405586 | None:intergenic | 45.0% | |
| !! | TATGAGGGCTGGTTATGTAC+CGG | - | chr2_2:48405644-48405663 | Msa0254820:intron | 45.0% |
| ATACCCAGCTTCATAAGTGG+GGG | + | chr2_2:48405866-48405885 | None:intergenic | 45.0% | |
| CATACCCAGCTTCATAAGTG+GGG | + | chr2_2:48405867-48405886 | None:intergenic | 45.0% | |
| GTCATACCCAGCTTCATAAG+TGG | + | chr2_2:48405869-48405888 | None:intergenic | 45.0% | |
| TCATGTCATTCAGACGCTCT+TGG | - | chr2_2:48405988-48406007 | Msa0254820:exon | 45.0% | |
| !!! | ATATATTTGTTTAATTTATT+TGG | - | chr2_2:48401256-48401275 | Msa0254820:three_prime_UTR | 5.0% |
| GTAGTTGAGACTGTCGTGGA+AGG | - | chr2_2:48401790-48401809 | Msa0254820:CDS | 50.0% | |
| ! | TCGGATCCGTGTTTCTGAAG+AGG | - | chr2_2:48401837-48401856 | Msa0254820:CDS | 50.0% |
| GCCATACACTGAGAAAGTGG+TGG | + | chr2_2:48401916-48401935 | None:intergenic | 50.0% | |
| GCAGCCATACACTGAGAAAG+TGG | + | chr2_2:48401919-48401938 | None:intergenic | 50.0% | |
| ! | AGCAGAGGAAGATTGGTAGC+TGG | - | chr2_2:48402126-48402145 | Msa0254820:intron | 50.0% |
| ! | GCAGAGGAAGATTGGTAGCT+GGG | - | chr2_2:48402127-48402146 | Msa0254820:intron | 50.0% |
| TCAGGGCTACACTGATCATG+TGG | - | chr2_2:48402155-48402174 | Msa0254820:intron | 50.0% | |
| GGCTACACTGATCATGTGGA+TGG | - | chr2_2:48402159-48402178 | Msa0254820:intron | 50.0% | |
| ! | AATGTTGCTGGCTACAGGGA+CGG | - | chr2_2:48402420-48402439 | Msa0254820:intron | 50.0% |
| CGTTTCGCTCTCGAATACCT+AGG | + | chr2_2:48403114-48403133 | None:intergenic | 50.0% | |
| GTAATAGAGCTACGAGAGGG+TGG | - | chr2_2:48403236-48403255 | Msa0254820:intron | 50.0% | |
| ! | TTTCATTGTGGTGGCGATGC+TGG | - | chr2_2:48403312-48403331 | Msa0254820:intron | 50.0% |
| CTAAGCCGACCCATGATAGT+TGG | - | chr2_2:48403338-48403357 | Msa0254820:intron | 50.0% | |
| ! | GGAAAATGTGCTGCTGAGGA+AGG | - | chr2_2:48403359-48403378 | Msa0254820:intron | 50.0% |
| CTGCTGAGGAAGGAGAAAAC+CGG | - | chr2_2:48403369-48403388 | Msa0254820:intron | 50.0% | |
| AAGGAGAAAACCGGCAACGA+AGG | - | chr2_2:48403378-48403397 | Msa0254820:intron | 50.0% | |
| GGATCAACTTCCTTCGTTGC+CGG | + | chr2_2:48403391-48403410 | None:intergenic | 50.0% | |
| ACCGGAAAGATCTCATGGAG+AGG | - | chr2_2:48403432-48403451 | Msa0254820:intron | 50.0% | |
| CTTCTGATCGATGAGCATGG+TGG | - | chr2_2:48403476-48403495 | Msa0254820:intron | 50.0% | |
| TGATCGATGAGCATGGTGGT+CGG | - | chr2_2:48403480-48403499 | Msa0254820:intron | 50.0% | |
| GTCGAGAATGTTGTTGGCAG+TGG | - | chr2_2:48403509-48403528 | Msa0254820:intron | 50.0% | |
| GAGAATGTTGTTGGCAGTGG+TGG | - | chr2_2:48403512-48403531 | Msa0254820:intron | 50.0% | |
| ACTTGCCAACTACACACACG+TGG | + | chr2_2:48403628-48403647 | None:intergenic | 50.0% | |
| !!! | TGGCCCCCATGATTTTGACT+CGG | + | chr2_2:48403656-48403675 | None:intergenic | 50.0% |
| ! | GGGAACATCTTTTGGCCACA+TGG | - | chr2_2:48403975-48403994 | Msa0254820:intron | 50.0% |
| TGCATGCTTCAGCAGGGATT+TGG | - | chr2_2:48404366-48404385 | Msa0254820:intron | 50.0% | |
| GGGGTTGTGGGGAAGAAAAA+AGG | - | chr2_2:48404860-48404879 | Msa0254820:CDS | 50.0% | |
| TGACAAACGCATGCCAATCC+CGG | - | chr2_2:48405071-48405090 | Msa0254820:CDS | 50.0% | |
| TCTTTACTGCTCTCCGGGAT+TGG | + | chr2_2:48405087-48405106 | None:intergenic | 50.0% | |
| AATCCCGGAGAGCAGTAAAG+AGG | - | chr2_2:48405086-48405105 | Msa0254820:CDS | 50.0% | |
| GATCCTCTTTACTGCTCTCC+GGG | + | chr2_2:48405092-48405111 | None:intergenic | 50.0% | |
| GGATCCTCTTTACTGCTCTC+CGG | + | chr2_2:48405093-48405112 | None:intergenic | 50.0% | |
| GAGAGCAGTAAAGAGGATCC+CGG | - | chr2_2:48405093-48405112 | Msa0254820:CDS | 50.0% | |
| TGTCCAAAAGATGGCCATCC+GGG | + | chr2_2:48405114-48405133 | None:intergenic | 50.0% | |
| TGCACCAGCCAAAGCTTCAA+GGG | + | chr2_2:48405163-48405182 | None:intergenic | 50.0% | |
| ATGCACCAGCCAAAGCTTCA+AGG | + | chr2_2:48405164-48405183 | None:intergenic | 50.0% | |
| ! | ATCCTTCAGCGGTGTTAGTC+CGG | + | chr2_2:48405232-48405251 | None:intergenic | 50.0% |
| CTGCTCGATTTCACCTTTGG+AGG | + | chr2_2:48405390-48405409 | None:intergenic | 50.0% | |
| GATGTCTAGGCCGTTCTTTC+TGG | + | chr2_2:48405512-48405531 | None:intergenic | 50.0% | |
| !!! | TTTTCTCGGTGCCGATGTCT+AGG | + | chr2_2:48405525-48405544 | None:intergenic | 50.0% |
| CTATGATCAACAGCTGCCCT+CGG | + | chr2_2:48405600-48405619 | None:intergenic | 50.0% | |
| !! | ATGAGGGCTGGTTATGTACC+GGG | - | chr2_2:48405645-48405664 | Msa0254820:intron | 50.0% |
| TTGAATCGGAAGGACTCTCC+CGG | + | chr2_2:48405666-48405685 | None:intergenic | 50.0% | |
| TGTACCCCCACTTATGAAGC+TGG | - | chr2_2:48405859-48405878 | Msa0254820:intron | 50.0% | |
| GTACCCCCACTTATGAAGCT+GGG | - | chr2_2:48405860-48405879 | Msa0254820:intron | 50.0% | |
| GAAGCTGGGTATGACCACAA+TGG | - | chr2_2:48405874-48405893 | Msa0254820:intron | 50.0% | |
| AGGGTAGGGCGGTGATCAAA+AGG | + | chr2_2:48400826-48400845 | None:intergenic | 55.0% | |
| !!! | GTTTTTCGAGGAGGGTAGGG+CGG | + | chr2_2:48400837-48400856 | None:intergenic | 55.0% |
| GGTGTGACTACCATAGCTGG+AGG | - | chr2_2:48402390-48402409 | Msa0254820:intron | 55.0% | |
| TCGGCCAACCTGTTCCTTGT+TGG | - | chr2_2:48402491-48402510 | Msa0254820:intron | 55.0% | |
| GGGGCCAGACTTGTGCAAAA+GGG | - | chr2_2:48403669-48403688 | Msa0254820:intron | 55.0% | |
| TGCCACATGCATGCTTCAGC+AGG | - | chr2_2:48404359-48404378 | Msa0254820:intron | 55.0% | |
| GCCACATGCATGCTTCAGCA+GGG | - | chr2_2:48404360-48404379 | Msa0254820:intron | 55.0% | |
| TCCCTGCTGAAGCATGCATG+TGG | + | chr2_2:48404364-48404383 | None:intergenic | 55.0% | |
| GCAGTAAAGAGGATCCCGGA+TGG | - | chr2_2:48405097-48405116 | Msa0254820:CDS | 55.0% | |
| ! | GATCCCGGATGGCCATCTTT+TGG | - | chr2_2:48405108-48405127 | Msa0254820:CDS | 55.0% |
| ! | GCGGTGTTAGTCCGGTATTC+CGG | + | chr2_2:48405224-48405243 | None:intergenic | 55.0% |
| TACCGGACTAACACCGCTGA+AGG | - | chr2_2:48405227-48405246 | Msa0254820:CDS | 55.0% | |
| ! | CATCGGCACCGAGAAAAGAG+CGG | - | chr2_2:48405528-48405547 | Msa0254820:intron | 55.0% |
| AGGCTAAACCTGTTGAGCCG+AGG | - | chr2_2:48405580-48405599 | Msa0254820:intron | 55.0% | |
| GGCTAAACCTGTTGAGCCGA+GGG | - | chr2_2:48405581-48405600 | Msa0254820:intron | 55.0% | |
| CTACAGGGACGGACCTAGTG+AGG | - | chr2_2:48402431-48402450 | Msa0254820:intron | 60.0% | |
| GGGGGCCAGACTTGTGCAAA+AGG | - | chr2_2:48403668-48403687 | Msa0254820:intron | 60.0% | |
| GGAGGCTGGACTTCGTCTTC+TGG | + | chr2_2:48405267-48405286 | None:intergenic | 60.0% | |
| CCTGCAGGAGCAGCGTGAGT+TGG | + | chr2_2:48401105-48401124 | None:intergenic | 65.0% | |
| CCAACTCACGCTGCTCCTGC+AGG | - | chr2_2:48401102-48401121 | Msa0254820:three_prime_UTR | 65.0% | |
| ACAGCTGCCCTCGGCTCAAC+AGG | + | chr2_2:48405591-48405610 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 48400809 | 48406202 | 48400809 | ID=Msa0254820;Name=Msa0254820 |
| chr2_2 | mRNA | 48400809 | 48406202 | 48400809 | ID=Msa0254820-mRNA-1;Parent=Msa0254820;Name=Msa0254820-mRNA-1;_AED=0.11;_eAED=0.11;_QI=212|0.6|0.83|1|1|1|6|507|493 |
| chr2_2 | exon | 48400809 | 48401978 | 48400809 | ID=Msa0254820-mRNA-1:exon:14669;Parent=Msa0254820-mRNA-1 |
| chr2_2 | exon | 48402601 | 48402689 | 48402601 | ID=Msa0254820-mRNA-1:exon:14668;Parent=Msa0254820-mRNA-1 |
| chr2_2 | exon | 48404411 | 48404620 | 48404411 | ID=Msa0254820-mRNA-1:exon:14667;Parent=Msa0254820-mRNA-1 |
| chr2_2 | exon | 48404717 | 48404887 | 48404717 | ID=Msa0254820-mRNA-1:exon:14666;Parent=Msa0254820-mRNA-1 |
| chr2_2 | exon | 48405008 | 48405253 | 48405008 | ID=Msa0254820-mRNA-1:exon:14665;Parent=Msa0254820-mRNA-1 |
| chr2_2 | exon | 48405888 | 48406202 | 48405888 | ID=Msa0254820-mRNA-1:exon:14664;Parent=Msa0254820-mRNA-1 |
| chr2_2 | five_prime_UTR | 48405991 | 48406202 | 48405991 | ID=Msa0254820-mRNA-1:five_prime_utr;Parent=Msa0254820-mRNA-1 |
| chr2_2 | CDS | 48405888 | 48405990 | 48405888 | ID=Msa0254820-mRNA-1:cds;Parent=Msa0254820-mRNA-1 |
| chr2_2 | CDS | 48405008 | 48405253 | 48405008 | ID=Msa0254820-mRNA-1:cds;Parent=Msa0254820-mRNA-1 |
| chr2_2 | CDS | 48404717 | 48404887 | 48404717 | ID=Msa0254820-mRNA-1:cds;Parent=Msa0254820-mRNA-1 |
| chr2_2 | CDS | 48404411 | 48404620 | 48404411 | ID=Msa0254820-mRNA-1:cds;Parent=Msa0254820-mRNA-1 |
| chr2_2 | CDS | 48402601 | 48402689 | 48402601 | ID=Msa0254820-mRNA-1:cds;Parent=Msa0254820-mRNA-1 |
| chr2_2 | CDS | 48401316 | 48401978 | 48401316 | ID=Msa0254820-mRNA-1:cds;Parent=Msa0254820-mRNA-1 |
| chr2_2 | three_prime_UTR | 48400809 | 48401315 | 48400809 | ID=Msa0254820-mRNA-1:three_prime_utr;Parent=Msa0254820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
