Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332560 | XP_003596317.1 | 91.383 | 499 | 12 | 3 | 1 | 474 | 1 | 493 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0254820 | Msa0332560 | 0.884243 | 2.264096e-71 | -8.615850e-47 |
| Msa0294850 | Msa0332560 | 0.985695 | 2.255667e-164 | -8.615850e-47 |
| Msa0332560 | Msa0580940 | 0.801520 | 8.663608e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332560 | MtrunA17_Chr2g0315511 | 91.383 | 499 | 12 | 3 | 1 | 474 | 1 | 493 | 0.0 | 920 |
| Msa0332560 | MtrunA17_Chr8g0359721 | 82.911 | 158 | 27 | 0 | 94 | 251 | 21 | 178 | 9.58e-91 | 273 |
| Msa0332560 | MtrunA17_Chr8g0364941 | 42.229 | 341 | 155 | 9 | 37 | 347 | 68 | 396 | 1.68e-72 | 238 |
| Msa0332560 | MtrunA17_Chr5g0413801 | 41.463 | 369 | 173 | 14 | 21 | 359 | 50 | 405 | 6.28e-71 | 235 |
| Msa0332560 | MtrunA17_Chr6g0451131 | 37.958 | 382 | 184 | 13 | 17 | 352 | 43 | 417 | 1.83e-64 | 218 |
| Msa0332560 | MtrunA17_Chr8g0359711 | 54.967 | 151 | 51 | 7 | 331 | 472 | 1 | 143 | 1.77e-34 | 126 |
| Msa0332560 | MtrunA17_Chr8g0364901 | 36.224 | 196 | 109 | 3 | 25 | 220 | 22 | 201 | 1.25e-30 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0332560 | AT3G14860.1 | 58.918 | 499 | 139 | 18 | 12 | 471 | 21 | 492 | 0.0 | 531 |
| Msa0332560 | AT3G14860.2 | 59.000 | 500 | 138 | 17 | 12 | 471 | 21 | 493 | 0.0 | 530 |
| Msa0332560 | AT1G70280.1 | 43.598 | 328 | 157 | 8 | 38 | 347 | 1 | 318 | 1.03e-70 | 231 |
| Msa0332560 | AT1G23880.1 | 40.909 | 352 | 178 | 7 | 17 | 347 | 103 | 445 | 2.48e-70 | 233 |
| Msa0332560 | AT1G70280.2 | 43.373 | 332 | 160 | 8 | 34 | 347 | 59 | 380 | 4.50e-70 | 231 |
| Msa0332560 | AT1G23880.2 | 41.818 | 330 | 163 | 6 | 38 | 347 | 1 | 321 | 8.91e-70 | 228 |
| Msa0332560 | AT5G14890.1 | 36.391 | 327 | 181 | 6 | 38 | 346 | 71 | 388 | 7.24e-58 | 199 |
| Msa0332560 | AT1G23890.1 | 42.857 | 210 | 107 | 5 | 39 | 247 | 23 | 220 | 7.51e-40 | 144 |
| Msa0332560 | AT1G23890.2 | 42.857 | 210 | 107 | 5 | 39 | 247 | 23 | 220 | 1.79e-38 | 144 |
Find 157 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGTCTAGGCCGTTCTTTC+TGG | 0.113839 | 2_4:+49664300 | None:intergenic |
| ATTGGTAGCTGGGTCATTTC+AGG | 0.184957 | 2_4:-49667679 | Msa0332560:CDS |
| TAATTCACTTTCCACGTAAA+TGG | 0.190545 | 2_4:-49668948 | Msa0332560:five_prime_UTR |
| ATCATCCATGGTTATGCCTT+TGG | 0.231390 | 2_4:+49667605 | None:intergenic |
| TTAGATTTGGATTTGAATTC+AGG | 0.237782 | 2_4:-49663873 | Msa0332560:three_prime_UTR |
| TAAAGTTGCATTCTTAGATT+TGG | 0.278837 | 2_4:-49663886 | Msa0332560:three_prime_UTR |
| GCAGATATCCTTATAGTTGT+TGG | 0.297802 | 2_4:-49665491 | Msa0332560:intron |
| AGTGCACATATTCGATATAA+TGG | 0.308727 | 2_4:+49664073 | None:intergenic |
| TTGAAAATGGAGAGAGAAAA+TGG | 0.311306 | 2_4:+49668738 | None:intergenic |
| TCATCCATGGTTATGCCTTT+GGG | 0.313054 | 2_4:+49667606 | None:intergenic |
| CAGCGTGAGTTGGTTGAAAA+TGG | 0.314787 | 2_4:+49668725 | None:intergenic |
| TATAGTTGTTGGTGCTGTTT+TGG | 0.318708 | 2_4:-49665480 | Msa0332560:CDS |
| TCATCAGGACAAGAGTTTAA+AGG | 0.320976 | 2_4:-49664773 | Msa0332560:CDS |
| TCCGAGTATGCTGAATTCTA+TGG | 0.323748 | 2_4:-49664362 | Msa0332560:CDS |
| TTCGATTTAGCATATGATAA+TGG | 0.328338 | 2_4:+49664326 | None:intergenic |
| TAAGATATCCCTTGAAGCTT+TGG | 0.330766 | 2_4:-49664657 | Msa0332560:CDS |
| CTGTTACTGTTACCGAAAAT+AGG | 0.337324 | 2_4:-49664499 | Msa0332560:CDS |
| AAACTGCTCGATTTCACCTT+TGG | 0.340830 | 2_4:+49664419 | None:intergenic |
| TGCATGCTTCAGCAGGGATT+TGG | 0.344530 | 2_4:-49665443 | Msa0332560:CDS |
| GGAGGCTGGACTTCGTCTTC+TGG | 0.351381 | 2_4:+49664545 | None:intergenic |
| GGATTTGAATTCAGGACCTT+TGG | 0.362534 | 2_4:-49663865 | Msa0332560:three_prime_UTR |
| GGCATAACCATGGATGATAA+AGG | 0.363679 | 2_4:-49667600 | Msa0332560:CDS |
| GATCCCGGATGGCCATCTTT+TGG | 0.365545 | 2_4:-49664701 | Msa0332560:CDS |
| TCGGAAAATTATTCTTGATC+AGG | 0.370371 | 2_4:-49667277 | Msa0332560:CDS |
| ACAGCTGCCCTCGGCTCAAC+AGG | 0.371694 | 2_4:+49664221 | None:intergenic |
| TGTATCCCCGTTTACGAAGC+TGG | 0.372541 | 2_4:-49663950 | Msa0332560:three_prime_UTR |
| AATTTGATCGTTATAATATG+AGG | 0.375286 | 2_4:-49664181 | Msa0332560:CDS |
| GCGGTGTTAGTCCGGTATTC+CGG | 0.380645 | 2_4:+49664588 | None:intergenic |
| AAACAGCACCAACAACTATA+AGG | 0.385372 | 2_4:+49665483 | None:intergenic |
| CATCAGGACAAGAGTTTAAA+GGG | 0.388430 | 2_4:-49664772 | Msa0332560:CDS |
| TCATCTTATTCAAACGATCT+TGG | 0.390517 | 2_4:-49663821 | Msa0332560:three_prime_UTR |
| CTTTGCTTCTGAATATTTCT+CGG | 0.391575 | 2_4:+49664445 | None:intergenic |
| AGTTAGTATGTAATTGTAGT+TGG | 0.392080 | 2_4:-49664037 | Msa0332560:three_prime_UTR |
| ATCCTTCAGCGGTGTTAGTC+CGG | 0.395014 | 2_4:+49664580 | None:intergenic |
| CTTAGTTTGAGAAGAAGTTA+TGG | 0.395154 | 2_4:+49668819 | None:intergenic |
| AGTCAAATGTTGCTGGCTAC+AGG | 0.405357 | 2_4:-49667401 | Msa0332560:CDS |
| CTTGGAGTACAATTTCTGTT+TGG | 0.407487 | 2_4:-49663803 | Msa0332560:three_prime_UTR |
| TGCCACATGCATGCTTCAGC+AGG | 0.408908 | 2_4:-49665450 | Msa0332560:CDS |
| TGTGCATTAGTCAATATCAT+AGG | 0.411468 | 2_4:-49663778 | Msa0332560:three_prime_UTR |
| TCTTTACTGCTCTCCGGGAT+TGG | 0.412695 | 2_4:+49664725 | None:intergenic |
| CTGCTCGATTTCACCTTTGG+AGG | 0.412793 | 2_4:+49664422 | None:intergenic |
| TTTGAAGATCGGTGCTTACT+AGG | 0.413195 | 2_4:+49664389 | None:intergenic |
| TGCAGATAGTAGAGGAAGAT+TGG | 0.414014 | 2_4:-49667697 | Msa0332560:intron |
| ATTCAGGACCTTTGGTTAAG+TGG | 0.415827 | 2_4:-49663857 | Msa0332560:three_prime_UTR |
| GTCATACCCAGCTTCGTAAA+CGG | 0.421155 | 2_4:+49663943 | None:intergenic |
| TCATACCCAGCTTCGTAAAC+GGG | 0.424753 | 2_4:+49663944 | None:intergenic |
| TCGGCCAACCTGTTCCTTGT+TGG | 0.431123 | 2_4:-49667325 | Msa0332560:CDS |
| CTTGTTACTGAGAGTTGAAT+CGG | 0.432352 | 2_4:+49664132 | None:intergenic |
| AGATTGGAGTTATACCTTAT+CGG | 0.432777 | 2_4:-49667998 | Msa0332560:CDS |
| TCCTTGTTGGTCATTGATAG+AGG | 0.433415 | 2_4:-49667312 | Msa0332560:CDS |
| CATAGGTTTCTGTTTGCAAT+GGG | 0.437633 | 2_4:-49663761 | Msa0332560:three_prime_UTR |
| AACATTCCCTTTATCATCCA+TGG | 0.441373 | 2_4:+49667593 | None:intergenic |
| GGATCCTCTTTACTGCTCTC+CGG | 0.441772 | 2_4:+49664719 | None:intergenic |
| ATCAATGACCAACAAGGAAC+AGG | 0.443067 | 2_4:+49667317 | None:intergenic |
| GGAGGAAAGTCAAATGTTGC+TGG | 0.444320 | 2_4:-49667408 | Msa0332560:CDS |
| AGTAGAGGAAGATTGGTAGC+TGG | 0.451143 | 2_4:-49667690 | Msa0332560:CDS |
| GATCCTCTTTACTGCTCTCC+GGG | 0.453440 | 2_4:+49664720 | None:intergenic |
| CACATTTCAAATTTAACAGC+CGG | 0.454963 | 2_4:-49664607 | Msa0332560:CDS |
| ACCACCACTGTCTCAGTGTA+TGG | 0.457344 | 2_4:-49667904 | Msa0332560:CDS |
| AATGTTCTTCAATTTGAGAA+TGG | 0.458459 | 2_4:-49668053 | Msa0332560:CDS |
| TTGGTAGCTGGGTCATTTCA+GGG | 0.461417 | 2_4:-49667678 | Msa0332560:CDS |
| GCATAACCATGGATGATAAA+GGG | 0.462122 | 2_4:-49667599 | Msa0332560:CDS |
| AGCATTTAGTCACAACATGC+TGG | 0.464687 | 2_4:+49663702 | None:intergenic |
| TTCTGAATATTTCTCGGCAA+TGG | 0.467055 | 2_4:+49664451 | None:intergenic |
| GGTGAAATCGAGCAGTTTCA+AGG | 0.467708 | 2_4:-49664414 | Msa0332560:CDS |
| ATTTCGATGTGGTATATGTT+CGG | 0.467909 | 2_4:-49667344 | Msa0332560:CDS |
| ATCACAACTCACAAGTGATT+CGG | 0.469451 | 2_4:+49663979 | None:intergenic |
| AGGGTAGGGCGGTGATCAAA+AGG | 0.473003 | 2_4:+49668986 | None:intergenic |
| TTGTCCAAAAGATGGCCATC+CGG | 0.474257 | 2_4:+49664697 | None:intergenic |
| AACTCACAAGTGATTCGGTA+TGG | 0.478569 | 2_4:+49663984 | None:intergenic |
| TCCAGCCTCCATTAGTCAAA+AGG | 0.479284 | 2_4:-49664532 | Msa0332560:CDS |
| AAATTTAACAGCCGGAATAC+CGG | 0.480857 | 2_4:-49664599 | Msa0332560:CDS |
| TAAATGACACAGAGATCATC+AGG | 0.482832 | 2_4:-49664788 | Msa0332560:intron |
| TGACAAACGCATGCCAATCC+CGG | 0.483246 | 2_4:-49664738 | Msa0332560:CDS |
| GAATATTTCTCGGCAATGGT+TGG | 0.483363 | 2_4:+49664455 | None:intergenic |
| TTAGGTGTGACTACCATAGC+TGG | 0.483410 | 2_4:-49667429 | Msa0332560:intron |
| TCTAGTTCAATTTCAAGCAC+AGG | 0.486482 | 2_4:-49667237 | Msa0332560:intron |
| TATGCTGAATTCTATGGATC+TGG | 0.486793 | 2_4:-49664356 | Msa0332560:CDS |
| TGTCCAAAAGATGGCCATCC+GGG | 0.493623 | 2_4:+49664698 | None:intergenic |
| TCATAGGTTTCTGTTTGCAA+TGG | 0.494925 | 2_4:-49663762 | Msa0332560:three_prime_UTR |
| GTCGTGGAAGGAAATGAGAT+TGG | 0.497348 | 2_4:-49668014 | Msa0332560:CDS |
| TTAGCCTCAGCTCCATTTGT+CGG | 0.499536 | 2_4:+49664245 | None:intergenic |
| CGAAAATAGGCAAATGCCAC+AGG | 0.499691 | 2_4:-49664486 | Msa0332560:CDS |
| TGAGAAGAAGTTATGGCAAG+TGG | 0.500466 | 2_4:+49668826 | None:intergenic |
| ATGCACCAGCCAAAGCTTCA+AGG | 0.501795 | 2_4:+49664648 | None:intergenic |
| TTGAAGATCGGTGCTTACTA+GGG | 0.502387 | 2_4:+49664390 | None:intergenic |
| ATCAGAAAGATCGGAGATGC+TGG | 0.509524 | 2_4:-49667543 | Msa0332560:intron |
| TCAGAAACACGGATCCGATA+AGG | 0.510200 | 2_4:+49667984 | None:intergenic |
| ATAGAGGAAATGCTGCTCTT+CGG | 0.511182 | 2_4:-49667296 | Msa0332560:CDS |
| GTATCCCCGTTTACGAAGCT+GGG | 0.514071 | 2_4:-49663949 | Msa0332560:three_prime_UTR |
| ATATCCCTTGAAGCTTTGGC+TGG | 0.514331 | 2_4:-49664653 | Msa0332560:CDS |
| TCCATAGAATTCAGCATACT+CGG | 0.517153 | 2_4:+49664361 | None:intergenic |
| GCAATAAGTTGTCCAAAAGA+TGG | 0.517370 | 2_4:+49664689 | None:intergenic |
| GATCGTTATAATATGAGGGC+TGG | 0.518594 | 2_4:-49664176 | Msa0332560:CDS |
| ATTTGACTTTCCTCCAGCTA+TGG | 0.522706 | 2_4:+49667416 | None:intergenic |
| TATATTATGCAAGAAATCAA+TGG | 0.522802 | 2_4:-49663649 | Msa0332560:three_prime_UTR |
| GAAAATTATTCTTGATCAGG+AGG | 0.523654 | 2_4:-49667274 | Msa0332560:CDS |
| GTAGAGGAAGATTGGTAGCT+GGG | 0.530023 | 2_4:-49667689 | Msa0332560:CDS |
| AAGGGATATCTTAGAAAGAT+CGG | 0.530728 | 2_4:+49664667 | None:intergenic |
| GTCTCTTTCCACTTAACCAA+AGG | 0.532836 | 2_4:+49663849 | None:intergenic |
| TATGAGGGCTGGTTATGTAC+CGG | 0.534793 | 2_4:-49664165 | Msa0332560:CDS |
| TGATTAAACCGAGCATCACT+AGG | 0.541022 | 2_4:+49667630 | None:intergenic |
| ATTTGATCGTTATAATATGA+GGG | 0.541043 | 2_4:-49664180 | Msa0332560:CDS |
| CTATGATCAACAGCTGCCCT+CGG | 0.543296 | 2_4:+49664212 | None:intergenic |
| CCAACTCACGCTGCTCCTGC+AGG | 0.544465 | 2_4:-49668715 | Msa0332560:intron |
| GAGAACTTAGCATCCTCACT+AGG | 0.546505 | 2_4:+49667372 | None:intergenic |
| CCTGCAGGAGCAGCGTGAGT+TGG | 0.557687 | 2_4:+49668715 | None:intergenic |
| TACCGGACTAACACCGCTGA+AGG | 0.559206 | 2_4:-49664582 | Msa0332560:CDS |
| CTGTTAAATTTGAAATGTGA+GGG | 0.559220 | 2_4:+49664611 | None:intergenic |
| AATCTTGCCATCAGAAAGAT+CGG | 0.561483 | 2_4:-49667552 | Msa0332560:CDS |
| GGCTAAACCTGTTGAGCCGA+GGG | 0.561495 | 2_4:-49664228 | Msa0332560:CDS |
| TCGGATCCGTGTTTCTGAAG+AGG | 0.562002 | 2_4:-49667979 | Msa0332560:CDS |
| TGCACCAGCCAAAGCTTCAA+GGG | 0.563368 | 2_4:+49664649 | None:intergenic |
| GTCAAATGTTGCTGGCTACA+GGG | 0.570531 | 2_4:-49667400 | Msa0332560:CDS |
| AGGCTAAACCTGTTGAGCCG+AGG | 0.578331 | 2_4:-49664229 | Msa0332560:CDS |
| GCTGTTAAATTTGAAATGTG+AGG | 0.579431 | 2_4:+49664610 | None:intergenic |
| ATGCAACTTTAAAACTCATG+AGG | 0.584649 | 2_4:+49663898 | None:intergenic |
| AATCGAAGAGCCAGAAAGAA+CGG | 0.586075 | 2_4:-49664310 | Msa0332560:CDS |
| AATGTTGCTGGCTACAGGGA+CGG | 0.588694 | 2_4:-49667396 | Msa0332560:CDS |
| GGCTACACTGATCATGTGGA+TGG | 0.589310 | 2_4:-49667657 | Msa0332560:CDS |
| GCATTTAGTCACAACATGCT+GGG | 0.589743 | 2_4:+49663703 | None:intergenic |
| ATGAGGGCTGGTTATGTACC+GGG | 0.592535 | 2_4:-49664164 | Msa0332560:CDS |
| CACCATCCTCTTCAGAAACA+CGG | 0.594660 | 2_4:+49667973 | None:intergenic |
| AGCATCTCCGATCTTTCTGA+TGG | 0.596368 | 2_4:+49667545 | None:intergenic |
| TATGCTATTGCAGATAGTAG+AGG | 0.605173 | 2_4:-49667705 | Msa0332560:intron |
| AGAAAGAACGGCCTAGACAT+CGG | 0.608437 | 2_4:-49664298 | Msa0332560:CDS |
| ACTCACAAGTGATTCGGTAT+GGG | 0.608512 | 2_4:+49663985 | None:intergenic |
| GAGAGCAGTAAAGAGGATCC+CGG | 0.609183 | 2_4:-49664716 | Msa0332560:CDS |
| TGCAACTTTAAAACTCATGA+GGG | 0.610233 | 2_4:+49663899 | None:intergenic |
| AATCCCGGAGAGCAGTAAAG+AGG | 0.610675 | 2_4:-49664723 | Msa0332560:CDS |
| TTGAATCGGAAGGACTCTCC+CGG | 0.610821 | 2_4:+49664146 | None:intergenic |
| TATGGGTCAACATTAAGCAC+AGG | 0.611111 | 2_4:+49664002 | None:intergenic |
| GTAGTTGAGACTGTCGTGGA+AGG | 0.615503 | 2_4:-49668026 | Msa0332560:CDS |
| TTCAGAAGCAAAGCCTCCAA+AGG | 0.616320 | 2_4:-49664435 | Msa0332560:CDS |
| GCAGCCATACACTGAGACAG+TGG | 0.620004 | 2_4:+49667900 | None:intergenic |
| ATCCGTGTTTCTGAAGAGGA+TGG | 0.623423 | 2_4:-49667975 | Msa0332560:CDS |
| ATGGAAAACCTAGTGATGCT+CGG | 0.626220 | 2_4:-49667638 | Msa0332560:CDS |
| CTACAGGGACGGACCTAGTG+AGG | 0.633446 | 2_4:-49667385 | Msa0332560:CDS |
| GCCACATGCATGCTTCAGCA+GGG | 0.638543 | 2_4:-49665449 | Msa0332560:CDS |
| TCATCCCAAAGGCATAACCA+TGG | 0.642162 | 2_4:-49667610 | Msa0332560:CDS |
| GTTCTCTAATGATTTCGATG+TGG | 0.642456 | 2_4:-49667355 | Msa0332560:CDS |
| GCTCGGTTTAATCATCCCAA+AGG | 0.645409 | 2_4:-49667621 | Msa0332560:CDS |
| TCAGGGCTACACTGATCATG+TGG | 0.649867 | 2_4:-49667661 | Msa0332560:CDS |
| TCCTCTATCAATGACCAACA+AGG | 0.651015 | 2_4:+49667311 | None:intergenic |
| ATGACCAACAAGGAACAGGT+TGG | 0.653390 | 2_4:+49667321 | None:intergenic |
| CATACCCAGCTTCGTAAACG+GGG | 0.653997 | 2_4:+49663945 | None:intergenic |
| ATGGTTGGAGTATGTACCTG+TGG | 0.658014 | 2_4:+49664470 | None:intergenic |
| ATCACAAAACGATCCTTCAG+CGG | 0.663735 | 2_4:+49664569 | None:intergenic |
| TTACTGAGAGTTGAATCGGA+AGG | 0.667757 | 2_4:+49664136 | None:intergenic |
| GCAGTAAAGAGGATCCCGGA+TGG | 0.667794 | 2_4:-49664712 | Msa0332560:CDS |
| TCCCTGCTGAAGCATGCATG+TGG | 0.690176 | 2_4:+49665448 | None:intergenic |
| CATCGGCACCGAGAAAAGAG+CGG | 0.690979 | 2_4:-49664281 | Msa0332560:CDS |
| TGAATTCTATGGATCTGGTG+AGG | 0.693280 | 2_4:-49664351 | Msa0332560:CDS |
| GGTGTGACTACCATAGCTGG+AGG | 0.704707 | 2_4:-49667426 | Msa0332560:CDS |
| GAAGCTGGGTATGACCACAA+TGG | 0.709414 | 2_4:-49663935 | Msa0332560:three_prime_UTR |
| TTATGTAGTTGAGACTGTCG+TGG | 0.712210 | 2_4:-49668030 | Msa0332560:CDS |
| GCCATACACTGAGACAGTGG+TGG | 0.765920 | 2_4:+49667903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATATTTGTTTAATTTATT+TGG | - | chr2_4:49664069-49664088 | Msa0332560:three_prime_UTR | 10.0% |
| !! | TTGACTTTATATTAATTATT+AGG | - | chr2_4:49664770-49664789 | Msa0332560:CDS | 10.0% |
| !!! | ATTTTTTTTATCATTTTGAA+AGG | - | chr2_4:49666096-49666115 | Msa0332560:intron | 10.0% |
| !!! | GATCTTCATAAATATTTTTT+AGG | - | chr2_4:49665186-49665205 | Msa0332560:intron | 15.0% |
| !!! | GATATTAAATGATACTATTT+TGG | - | chr2_4:49665489-49665508 | Msa0332560:CDS | 15.0% |
| !!! | TTTTTGATTATATTTGCAAA+AGG | + | chr2_4:49666234-49666253 | None:intergenic | 15.0% |
| !! | AATAATAACTTAGGATTATT+TGG | - | chr2_4:49666539-49666558 | Msa0332560:intron | 15.0% |
| !! | TTTGTAAATATACGAAATTT+CGG | - | chr2_4:49667256-49667275 | Msa0332560:CDS | 15.0% |
| !!! | AATTTTCCATTTTTACCAAA+TGG | - | chr2_4:49663977-49663996 | Msa0332560:three_prime_UTR | 20.0% |
| !!! | ATTTTCCATTTTTACCAAAT+GGG | - | chr2_4:49663978-49663997 | Msa0332560:three_prime_UTR | 20.0% |
| !! | TTAAACAATGTTTATGAATC+AGG | - | chr2_4:49664101-49664120 | Msa0332560:three_prime_UTR | 20.0% |
| !!! | ATAGCTTTTCTAGTAATATT+TGG | - | chr2_4:49664216-49664235 | Msa0332560:CDS | 20.0% |
| !! | ATTTATAGATGAAAGTTATC+TGG | - | chr2_4:49664807-49664826 | Msa0332560:intron | 20.0% |
| !!! | TGTCATATTTTAGTAAAGTT+AGG | - | chr2_4:49665759-49665778 | Msa0332560:intron | 20.0% |
| !!! | TATTTTAGTAAAGTTAGGAA+AGG | - | chr2_4:49665764-49665783 | Msa0332560:intron | 20.0% |
| !! | TGCAAATATAATCAAAAAAC+CGG | - | chr2_4:49666236-49666255 | Msa0332560:intron | 20.0% |
| !! | AGTTATTATTGAAAAAGTCT+AGG | + | chr2_4:49666529-49666548 | None:intergenic | 20.0% |
| !!! | GACTTTTTCAATAATAACTT+AGG | - | chr2_4:49666530-49666549 | Msa0332560:intron | 20.0% |
| !! | AGAAATAAAATAAGGCATAT+GGG | + | chr2_4:49666586-49666605 | None:intergenic | 20.0% |
| !! | ATATGAGCAGAAATAAAATA+AGG | + | chr2_4:49666594-49666613 | None:intergenic | 20.0% |
| !! | TTTAGTTAAATTTGAATCGA+TGG | - | chr2_4:49667449-49667468 | Msa0332560:intron | 20.0% |
| !! | TTAGTTAAATTTGAATCGAT+GGG | - | chr2_4:49667450-49667469 | Msa0332560:intron | 20.0% |
| !!! | TCCTTTTAAAAATGAATACA+CGG | + | chr2_4:49667620-49667639 | None:intergenic | 20.0% |
| !! | AAGAATGAAAAGTTAAATGA+GGG | + | chr2_4:49667722-49667741 | None:intergenic | 20.0% |
| !! | AAAGAATGAAAAGTTAAATG+AGG | + | chr2_4:49667723-49667742 | None:intergenic | 20.0% |
| !! | AATTTGATCGTTATAATATG+AGG | - | chr2_4:49668452-49668471 | Msa0332560:intron | 20.0% |
| !! | ATTTGATCGTTATAATATGA+GGG | - | chr2_4:49668453-49668472 | Msa0332560:intron | 20.0% |
| !! | TATATTATGCAAGAAATCAA+TGG | - | chr2_4:49668984-49669003 | Msa0332560:five_prime_UTR | 20.0% |
| ! | ATTGAAGTAGTTGAAGAAAT+GGG | + | chr2_4:49663960-49663979 | None:intergenic | 25.0% |
| ! | AATTGAAGTAGTTGAAGAAA+TGG | + | chr2_4:49663961-49663980 | None:intergenic | 25.0% |
| ! | AATTAAAAACATACCCAGTT+TGG | + | chr2_4:49664045-49664064 | None:intergenic | 25.0% |
| ! | ATTTGTCTTCACTTATCAAA+TGG | - | chr2_4:49664138-49664157 | Msa0332560:CDS | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+AGG | + | chr2_4:49664242-49664261 | None:intergenic | 25.0% |
| !!! | TAAGTATTGATAAGCACTTA+TGG | + | chr2_4:49664278-49664297 | None:intergenic | 25.0% |
| !!! | TCTTTGTTTGTTTTTTCAGA+TGG | - | chr2_4:49664556-49664575 | Msa0332560:CDS | 25.0% |
| !!! | CTTTGTTTGTTTTTTCAGAT+GGG | - | chr2_4:49664557-49664576 | Msa0332560:CDS | 25.0% |
| ! | AATGTTCTTCAATTTGAGAA+TGG | - | chr2_4:49664580-49664599 | Msa0332560:CDS | 25.0% |
| ! | GTAAGACAAATGAATGAAAA+TGG | + | chr2_4:49664876-49664895 | None:intergenic | 25.0% |
| ! | AGATTACTTCTTAATTTCGT+CGG | - | chr2_4:49664896-49664915 | Msa0332560:intron | 25.0% |
| !! | GTATTTTCGTCTTTTATTCA+TGG | + | chr2_4:49665680-49665699 | None:intergenic | 25.0% |
| ! | TGGAAAAGAATTGAAGTTAA+AGG | - | chr2_4:49665805-49665824 | Msa0332560:intron | 25.0% |
| ! | GGAAAAGAATTGAAGTTAAA+GGG | - | chr2_4:49665806-49665825 | Msa0332560:intron | 25.0% |
| ! | ATTAAACAGTTACCCAAAAA+CGG | + | chr2_4:49665980-49665999 | None:intergenic | 25.0% |
| !!! | TTTTTGGGTAACTGTTTAAT+TGG | - | chr2_4:49665980-49665999 | Msa0332560:intron | 25.0% |
| !!! | TTTTGGGTAACTGTTTAATT+GGG | - | chr2_4:49665981-49666000 | Msa0332560:intron | 25.0% |
| ! | CAGAAATAAAATAAGGCATA+TGG | + | chr2_4:49666587-49666606 | None:intergenic | 25.0% |
| ! | AGGTAAACTTAGGAATTAAA+TGG | + | chr2_4:49666622-49666641 | None:intergenic | 25.0% |
| ! | ATGATCCCATTTCAAATATA+AGG | - | chr2_4:49666775-49666794 | Msa0332560:intron | 25.0% |
| ! | TGATCCCATTTCAAATATAA+GGG | - | chr2_4:49666776-49666795 | Msa0332560:intron | 25.0% |
| !! | TGTTCCCTTATATTTGAAAT+GGG | + | chr2_4:49666783-49666802 | None:intergenic | 25.0% |
| ! | ATGTTCCCTTATATTTGAAA+TGG | + | chr2_4:49666784-49666803 | None:intergenic | 25.0% |
| !! | AAATATAAGGGAACATCTTT+TGG | - | chr2_4:49666788-49666807 | Msa0332560:intron | 25.0% |
| ! | ATGATCTGATTCTTCTTTAT+CGG | - | chr2_4:49666918-49666937 | Msa0332560:intron | 25.0% |
| ! | TTTAGAGAAGTGAAAACAAT+GGG | - | chr2_4:49667013-49667032 | Msa0332560:intron | 25.0% |
| ! | TCGTATATTTACAAATTCTG+TGG | + | chr2_4:49667251-49667270 | None:intergenic | 25.0% |
| ! | TGATGTAACCTAAGTTATAA+TGG | - | chr2_4:49667299-49667318 | Msa0332560:CDS | 25.0% |
| !!! | GGTAAGATTTACTTATTTTC+CGG | - | chr2_4:49667509-49667528 | Msa0332560:intron | 25.0% |
| !!! | ACCGTGTATTCATTTTTAAA+AGG | - | chr2_4:49667616-49667635 | Msa0332560:CDS | 25.0% |
| !! | TTCCATTATTGTCAAACTTT+TGG | - | chr2_4:49667663-49667682 | Msa0332560:CDS | 25.0% |
| !! | TCCATTATTGTCAAACTTTT+GGG | - | chr2_4:49667664-49667683 | Msa0332560:CDS | 25.0% |
| ! | TTATGAAATAGCATCTTCTT+TGG | - | chr2_4:49667745-49667764 | Msa0332560:intron | 25.0% |
| ! | TATGAAATAGCATCTTCTTT+GGG | - | chr2_4:49667746-49667765 | Msa0332560:intron | 25.0% |
| !! | CTATGAAAGTGTAAATATCA+AGG | + | chr2_4:49667772-49667791 | None:intergenic | 25.0% |
| !! | CTGTTAAATTTGAAATGTGA+GGG | + | chr2_4:49668025-49668044 | None:intergenic | 25.0% |
| ! | TTCGATTTAGCATATGATAA+TGG | + | chr2_4:49668310-49668329 | None:intergenic | 25.0% |
| ! | AGTTAGTATGTAATTGTAGT+TGG | - | chr2_4:49668596-49668615 | Msa0332560:intron | 25.0% |
| ! | TAAAGTTGCATTCTTAGATT+TGG | - | chr2_4:49668747-49668766 | Msa0332560:CDS | 25.0% |
| ! | TTAGATTTGGATTTGAATTC+AGG | - | chr2_4:49668760-49668779 | Msa0332560:CDS | 25.0% |
| !!! | ATTAGTTAGTTTTTCGAGGA+GGG | + | chr2_4:49663669-49663688 | None:intergenic | 30.0% |
| !!! | AATTAGTTAGTTTTTCGAGG+AGG | + | chr2_4:49663670-49663689 | None:intergenic | 30.0% |
| !!! | GTGAATTAGTTAGTTTTTCG+AGG | + | chr2_4:49663673-49663692 | None:intergenic | 30.0% |
| TAATTCACTTTCCACGTAAA+TGG | - | chr2_4:49663685-49663704 | Msa0332560:three_prime_UTR | 30.0% | |
| !!! | ACTTTGTTTTTCCATTTACG+TGG | + | chr2_4:49663699-49663718 | None:intergenic | 30.0% |
| ! | CTTAGTTTGAGAAGAAGTTA+TGG | + | chr2_4:49663817-49663836 | None:intergenic | 30.0% |
| TTGAAAATGGAGAGAGAAAA+TGG | + | chr2_4:49663898-49663917 | None:intergenic | 30.0% | |
| GAAAATTTAGCATACCCATT+TGG | + | chr2_4:49663995-49664014 | None:intergenic | 30.0% | |
| TTGAGGTACAATAAGCAAAA+AGG | + | chr2_4:49664020-49664039 | None:intergenic | 30.0% | |
| GAAGACAAATGCTTAATCAA+TGG | + | chr2_4:49664128-49664147 | None:intergenic | 30.0% | |
| !! | TAGTAATATTTGGCCTTGTT+TGG | - | chr2_4:49664226-49664245 | Msa0332560:CDS | 30.0% |
| ! | AAGCTATTCTAGAGAACTTA+TGG | - | chr2_4:49664373-49664392 | Msa0332560:CDS | 30.0% |
| AGATTGGAGTTATACCTTAT+CGG | - | chr2_4:49664635-49664654 | Msa0332560:CDS | 30.0% | |
| ATAAAGTCAAGAGAACAAAC+AGG | + | chr2_4:49664760-49664779 | None:intergenic | 30.0% | |
| ! | TTTTCACCATTCTCATTTCA+CGG | + | chr2_4:49665153-49665172 | None:intergenic | 30.0% |
| TGAAATGAGAATGGTGAAAA+AGG | - | chr2_4:49665153-49665172 | Msa0332560:intron | 30.0% | |
| ATTTCGATGTGGTATATGTT+CGG | - | chr2_4:49665289-49665308 | Msa0332560:intron | 30.0% | |
| TCGGAAAATTATTCTTGATC+AGG | - | chr2_4:49665356-49665375 | Msa0332560:intron | 30.0% | |
| GAAAATTATTCTTGATCAGG+AGG | - | chr2_4:49665359-49665378 | Msa0332560:intron | 30.0% | |
| !!! | CGGAAGTTTTTATTTTTCAG+TGG | + | chr2_4:49665550-49665569 | None:intergenic | 30.0% |
| TCAAACCAGAACTTTAACAT+CGG | + | chr2_4:49665593-49665612 | None:intergenic | 30.0% | |
| ATGCATACAAACAGAATGAA+AGG | - | chr2_4:49665627-49665646 | Msa0332560:intron | 30.0% | |
| GTTAATTGTATCACTGTATG+TGG | - | chr2_4:49665705-49665724 | Msa0332560:intron | 30.0% | |
| GGTAGTAACTATGATAGAAT+TGG | - | chr2_4:49665785-49665804 | Msa0332560:intron | 30.0% | |
| ATTTATTTGCTCAACTCACT+AGG | - | chr2_4:49666664-49666683 | Msa0332560:intron | 30.0% | |
| TCAAACACATGTTCGATAAA+TGG | - | chr2_4:49666840-49666859 | Msa0332560:intron | 30.0% | |
| ACTTAGATAACTTCTCTGAT+AGG | + | chr2_4:49666877-49666896 | None:intergenic | 30.0% | |
| GTTTAGAGAAGTGAAAACAA+TGG | - | chr2_4:49667012-49667031 | Msa0332560:intron | 30.0% | |
| ATGGACTCGAATCAATTAAT+TGG | + | chr2_4:49667109-49667128 | None:intergenic | 30.0% | |
| ATCTGCAGAAAAACACAAAA+TGG | + | chr2_4:49667128-49667147 | None:intergenic | 30.0% | |
| !!! | TACTGTTTTTGAGAAGAAAG+AGG | + | chr2_4:49667218-49667237 | None:intergenic | 30.0% |
| TGTAACCTAAGTTATAATGG+CGG | - | chr2_4:49667302-49667321 | Msa0332560:CDS | 30.0% | |
| ! | TATAATCACTCCAGATGTTT+TGG | + | chr2_4:49667381-49667400 | None:intergenic | 30.0% |
| ATTATTCTAGTCAAGGATGA+GGG | + | chr2_4:49667485-49667504 | None:intergenic | 30.0% | |
| ! | TTCTCAAGTAATCTGGAATT+CGG | + | chr2_4:49667535-49667554 | None:intergenic | 30.0% |
| ! | CCATTATTGTCAAACTTTTG+GGG | - | chr2_4:49667665-49667684 | Msa0332560:CDS | 30.0% |
| AAGGGATATCTTAGAAAGAT+CGG | + | chr2_4:49667969-49667988 | None:intergenic | 30.0% | |
| ! | GCTGTTAAATTTGAAATGTG+AGG | + | chr2_4:49668026-49668045 | None:intergenic | 30.0% |
| CACATTTCAAATTTAACAGC+CGG | - | chr2_4:49668026-49668045 | Msa0332560:CDS | 30.0% | |
| !! | GTAGTTTTCCTTTTGACTAA+TGG | + | chr2_4:49668112-49668131 | None:intergenic | 30.0% |
| CTTTGCTTCTGAATATTTCT+CGG | + | chr2_4:49668191-49668210 | None:intergenic | 30.0% | |
| AGTGCACATATTCGATATAA+TGG | + | chr2_4:49668563-49668582 | None:intergenic | 30.0% | |
| !! | TGCAACTTTAAAACTCATGA+GGG | + | chr2_4:49668737-49668756 | None:intergenic | 30.0% |
| !! | ATGCAACTTTAAAACTCATG+AGG | + | chr2_4:49668738-49668757 | None:intergenic | 30.0% |
| TCATCTTATTCAAACGATCT+TGG | - | chr2_4:49668812-49668831 | Msa0332560:exon | 30.0% | |
| TGTGCATTAGTCAATATCAT+AGG | - | chr2_4:49668855-49668874 | Msa0332560:five_prime_UTR | 30.0% | |
| AAGTAGTTGAAGAAATGGGT+TGG | + | chr2_4:49663956-49663975 | None:intergenic | 35.0% | |
| GCATACCCATTTGGTAAAAA+TGG | + | chr2_4:49663986-49664005 | None:intergenic | 35.0% | |
| ATTGTACCTCAATTCCAAAC+TGG | - | chr2_4:49664028-49664047 | Msa0332560:three_prime_UTR | 35.0% | |
| TTGTACCTCAATTCCAAACT+GGG | - | chr2_4:49664029-49664048 | Msa0332560:three_prime_UTR | 35.0% | |
| CTTCACTTATCAAATGGACA+AGG | - | chr2_4:49664144-49664163 | Msa0332560:CDS | 35.0% | |
| TATGCTATTGCAGATAGTAG+AGG | - | chr2_4:49664928-49664947 | Msa0332560:intron | 35.0% | |
| GCATAACCATGGATGATAAA+GGG | - | chr2_4:49665034-49665053 | Msa0332560:intron | 35.0% | |
| AACATTCCCTTTATCATCCA+TGG | + | chr2_4:49665043-49665062 | None:intergenic | 35.0% | |
| AATCTTGCCATCAGAAAGAT+CGG | - | chr2_4:49665081-49665100 | Msa0332560:intron | 35.0% | |
| GTTCTCTAATGATTTCGATG+TGG | - | chr2_4:49665278-49665297 | Msa0332560:intron | 35.0% | |
| ! | TCTAGTTCAATTTCAAGCAC+AGG | - | chr2_4:49665396-49665415 | Msa0332560:intron | 35.0% |
| TGATTCCGATGTTAAAGTTC+TGG | - | chr2_4:49665585-49665604 | Msa0332560:intron | 35.0% | |
| ! | GTCTTTTATTCATGGCTGAT+TGG | + | chr2_4:49665672-49665691 | None:intergenic | 35.0% |
| TGTAAGAGAGCAAAACGAAA+AGG | - | chr2_4:49666010-49666029 | Msa0332560:intron | 35.0% | |
| GTAAGAGAGCAAAACGAAAA+GGG | - | chr2_4:49666011-49666030 | Msa0332560:intron | 35.0% | |
| !! | CATTTTGAAAGGTGAGTTTC+TGG | - | chr2_4:49666107-49666126 | Msa0332560:intron | 35.0% |
| !! | GTTTCTGGTTCATTTCATTG+TGG | - | chr2_4:49666122-49666141 | Msa0332560:intron | 35.0% |
| ! | ATTTTCCAACTATCATGGGT+CGG | + | chr2_4:49666168-49666187 | None:intergenic | 35.0% |
| ! | GCACATTTTCCAACTATCAT+GGG | + | chr2_4:49666172-49666191 | None:intergenic | 35.0% |
| ! | AGCACATTTTCCAACTATCA+TGG | + | chr2_4:49666173-49666192 | None:intergenic | 35.0% |
| AAAAAACCGGAAAGATCTCA+TGG | - | chr2_4:49666249-49666268 | Msa0332560:intron | 35.0% | |
| ! | TAAGAAGAGAGAAGGCTTTT+TGG | - | chr2_4:49666359-49666378 | Msa0332560:intron | 35.0% |
| ! | AAGAAGAGAGAAGGCTTTTT+GGG | - | chr2_4:49666360-49666379 | Msa0332560:intron | 35.0% |
| ATAGAAAGTTTGAGCTATGC+AGG | + | chr2_4:49666642-49666661 | None:intergenic | 35.0% | |
| CTCACTAGGACATTATCATT+TGG | - | chr2_4:49666678-49666697 | Msa0332560:intron | 35.0% | |
| TTTGGCAAACAAATGCATTG+TGG | - | chr2_4:49666696-49666715 | Msa0332560:intron | 35.0% | |
| GGATCATAAGAGTTGAACTT+GGG | + | chr2_4:49666762-49666781 | None:intergenic | 35.0% | |
| CACATGTTCGATAAATGGAA+AGG | - | chr2_4:49666845-49666864 | Msa0332560:intron | 35.0% | |
| GTTTGATATGCTGTTCTTGT+TGG | - | chr2_4:49666895-49666914 | Msa0332560:intron | 35.0% | |
| GCAGATATCCTTATAGTTGT+TGG | - | chr2_4:49667142-49667161 | Msa0332560:intron | 35.0% | |
| AAACAGCACCAACAACTATA+AGG | + | chr2_4:49667153-49667172 | None:intergenic | 35.0% | |
| !!! | TATAGTTGTTGGTGCTGTTT+TGG | - | chr2_4:49667153-49667172 | Msa0332560:intron | 35.0% |
| GTAACCTAAGTTATAATGGC+GGG | - | chr2_4:49667303-49667322 | Msa0332560:CDS | 35.0% | |
| !! | GGTACTGGGTAATGTTATTT+TGG | - | chr2_4:49667324-49667343 | Msa0332560:CDS | 35.0% |
| GATTATTCTAGTCAAGGATG+AGG | + | chr2_4:49667486-49667505 | None:intergenic | 35.0% | |
| TCCTTGACTAGAATAATCGT+AGG | - | chr2_4:49667488-49667507 | Msa0332560:intron | 35.0% | |
| ACCTACGATTATTCTAGTCA+AGG | + | chr2_4:49667492-49667511 | None:intergenic | 35.0% | |
| CCCCAAAAGTTTGACAATAA+TGG | + | chr2_4:49667668-49667687 | None:intergenic | 35.0% | |
| !!! | TGTTCATATTTTGACCATGC+TGG | - | chr2_4:49667805-49667824 | Msa0332560:intron | 35.0% |
| TAAATGACACAGAGATCATC+AGG | - | chr2_4:49667845-49667864 | Msa0332560:intron | 35.0% | |
| TCATCAGGACAAGAGTTTAA+AGG | - | chr2_4:49667860-49667879 | Msa0332560:intron | 35.0% | |
| CATCAGGACAAGAGTTTAAA+GGG | - | chr2_4:49667861-49667880 | Msa0332560:intron | 35.0% | |
| GCAATAAGTTGTCCAAAAGA+TGG | + | chr2_4:49667947-49667966 | None:intergenic | 35.0% | |
| TAAGATATCCCTTGAAGCTT+TGG | - | chr2_4:49667976-49667995 | Msa0332560:CDS | 35.0% | |
| AAATTTAACAGCCGGAATAC+CGG | - | chr2_4:49668034-49668053 | Msa0332560:CDS | 35.0% | |
| !! | GTTTTCCTTTTGACTAATGG+AGG | + | chr2_4:49668109-49668128 | None:intergenic | 35.0% |
| ! | CTATTTTCGGTAACAGTAAC+AGG | + | chr2_4:49668136-49668155 | None:intergenic | 35.0% |
| CTGTTACTGTTACCGAAAAT+AGG | - | chr2_4:49668134-49668153 | Msa0332560:intron | 35.0% | |
| TTCTGAATATTTCTCGGCAA+TGG | + | chr2_4:49668185-49668204 | None:intergenic | 35.0% | |
| TCCATAGAATTCAGCATACT+CGG | + | chr2_4:49668275-49668294 | None:intergenic | 35.0% | |
| TATGCTGAATTCTATGGATC+TGG | - | chr2_4:49668277-49668296 | Msa0332560:intron | 35.0% | |
| !!! | GAAGTTGTTTTTCCGACAAA+TGG | - | chr2_4:49668376-49668395 | Msa0332560:intron | 35.0% |
| CTTGTTACTGAGAGTTGAAT+CGG | + | chr2_4:49668504-49668523 | None:intergenic | 35.0% | |
| ATCACAACTCACAAGTGATT+CGG | + | chr2_4:49668657-49668676 | None:intergenic | 35.0% | |
| CTTGGAGTACAATTTCTGTT+TGG | - | chr2_4:49668830-49668849 | Msa0332560:five_prime_UTR | 35.0% | |
| TCATAGGTTTCTGTTTGCAA+TGG | - | chr2_4:49668871-49668890 | Msa0332560:five_prime_UTR | 35.0% | |
| CATAGGTTTCTGTTTGCAAT+GGG | - | chr2_4:49668872-49668891 | Msa0332560:five_prime_UTR | 35.0% | |
| !!! | TTAGTTTTTCGAGGAGGGTA+GGG | + | chr2_4:49663664-49663683 | None:intergenic | 40.0% |
| TGAGAAGAAGTTATGGCAAG+TGG | + | chr2_4:49663810-49663829 | None:intergenic | 40.0% | |
| ! | ACATACCCAGTTTGGAATTG+AGG | + | chr2_4:49664037-49664056 | None:intergenic | 40.0% |
| AATGAAGAATGACCTGAGTG+TGG | + | chr2_4:49664188-49664207 | None:intergenic | 40.0% | |
| TTATGTAGTTGAGACTGTCG+TGG | - | chr2_4:49664603-49664622 | Msa0332560:CDS | 40.0% | |
| ! | AGAGGATGGTGAACTTTTTG+CGG | - | chr2_4:49664672-49664691 | Msa0332560:CDS | 40.0% |
| ! | TGGCAAGTTAAGCACAGTTT+TGG | - | chr2_4:49664827-49664846 | Msa0332560:intron | 40.0% |
| TGCAGATAGTAGAGGAAGAT+TGG | - | chr2_4:49664936-49664955 | Msa0332560:intron | 40.0% | |
| ATGGAAAACCTAGTGATGCT+CGG | - | chr2_4:49664995-49665014 | Msa0332560:intron | 40.0% | |
| TGATTAAACCGAGCATCACT+AGG | + | chr2_4:49665006-49665025 | None:intergenic | 40.0% | |
| TCATCCATGGTTATGCCTTT+GGG | + | chr2_4:49665030-49665049 | None:intergenic | 40.0% | |
| ATCATCCATGGTTATGCCTT+TGG | + | chr2_4:49665031-49665050 | None:intergenic | 40.0% | |
| GGCATAACCATGGATGATAA+AGG | - | chr2_4:49665033-49665052 | Msa0332560:intron | 40.0% | |
| CATTGTCCGTGAAATGAGAA+TGG | - | chr2_4:49665144-49665163 | Msa0332560:intron | 40.0% | |
| ! | ATTTGACTTTCCTCCAGCTA+TGG | + | chr2_4:49665220-49665239 | None:intergenic | 40.0% |
| ATCAATGACCAACAAGGAAC+AGG | + | chr2_4:49665319-49665338 | None:intergenic | 40.0% | |
| TCCTTGTTGGTCATTGATAG+AGG | - | chr2_4:49665321-49665340 | Msa0332560:intron | 40.0% | |
| TCCTCTATCAATGACCAACA+AGG | + | chr2_4:49665325-49665344 | None:intergenic | 40.0% | |
| ATAGAGGAAATGCTGCTCTT+CGG | - | chr2_4:49665337-49665356 | Msa0332560:intron | 40.0% | |
| TTACCATGGCACTTATTCAG+AGG | + | chr2_4:49665857-49665876 | None:intergenic | 40.0% | |
| ATCACTGTACATCGTTACCA+TGG | + | chr2_4:49665871-49665890 | None:intergenic | 40.0% | |
| ! | TCAAAACCCAGATCCGTTTT+TGG | - | chr2_4:49665964-49665983 | Msa0332560:intron | 40.0% |
| !! | CAAAACCCAGATCCGTTTTT+GGG | - | chr2_4:49665965-49665984 | Msa0332560:intron | 40.0% |
| AGTTACCCAAAAACGGATCT+GGG | + | chr2_4:49665973-49665992 | None:intergenic | 40.0% | |
| AGTAGTAATAGAGCTACGAG+AGG | - | chr2_4:49666054-49666073 | Msa0332560:intron | 40.0% | |
| GTAGTAATAGAGCTACGAGA+GGG | - | chr2_4:49666055-49666074 | Msa0332560:intron | 40.0% | |
| ! | TCTGGTTCATTTCATTGTGG+TGG | - | chr2_4:49666125-49666144 | Msa0332560:intron | 40.0% |
| TTTCTTCTGATCGATGAGCA+TGG | - | chr2_4:49666295-49666314 | Msa0332560:intron | 40.0% | |
| AATTTCCACGTGTGTGTAGT+TGG | - | chr2_4:49666441-49666460 | Msa0332560:intron | 40.0% | |
| TGTTGACCGAGTCAAAATCA+TGG | - | chr2_4:49666468-49666487 | Msa0332560:intron | 40.0% | |
| GTTGACCGAGTCAAAATCAT+GGG | - | chr2_4:49666469-49666488 | Msa0332560:intron | 40.0% | |
| TTGACCGAGTCAAAATCATG+GGG | - | chr2_4:49666470-49666489 | Msa0332560:intron | 40.0% | |
| TGTGCAAAAGGGCTAAAGTT+AGG | - | chr2_4:49666501-49666520 | Msa0332560:intron | 40.0% | |
| GTGCAAAAGGGCTAAAGTTA+GGG | - | chr2_4:49666502-49666521 | Msa0332560:intron | 40.0% | |
| TGCAAAAGGGCTAAAGTTAG+GGG | - | chr2_4:49666503-49666522 | Msa0332560:intron | 40.0% | |
| TAAGGCATATGGGATGTCTA+AGG | + | chr2_4:49666576-49666595 | None:intergenic | 40.0% | |
| TGAGCTATGCAGGTAAACTT+AGG | + | chr2_4:49666632-49666651 | None:intergenic | 40.0% | |
| TAAGAGTTGAACTTGGGAGT+TGG | + | chr2_4:49666756-49666775 | None:intergenic | 40.0% | |
| GGGATCATAAGAGTTGAACT+TGG | + | chr2_4:49666763-49666782 | None:intergenic | 40.0% | |
| ACCTACAAATCTAGTCCATG+TGG | + | chr2_4:49666814-49666833 | None:intergenic | 40.0% | |
| AGTACCCGCCATTATAACTT+AGG | + | chr2_4:49667310-49667329 | None:intergenic | 40.0% | |
| !! | TAAGTTATAATGGCGGGTAC+TGG | - | chr2_4:49667309-49667328 | Msa0332560:CDS | 40.0% |
| !! | AAGTTATAATGGCGGGTACT+GGG | - | chr2_4:49667310-49667329 | Msa0332560:CDS | 40.0% |
| !!! | TGTTTTGGCACATCAAGAAG+CGG | + | chr2_4:49667366-49667385 | None:intergenic | 40.0% |
| TCTTGATGTGCCAAAACATC+TGG | - | chr2_4:49667368-49667387 | Msa0332560:CDS | 40.0% | |
| TGCAAGTAGTTCAAACCAAG+TGG | - | chr2_4:49667404-49667423 | Msa0332560:CDS | 40.0% | |
| AGTAGTTCAAACCAAGTGGT+TGG | - | chr2_4:49667408-49667427 | Msa0332560:CDS | 40.0% | |
| CAGATTACTTGAGAACCAGA+GGG | - | chr2_4:49667540-49667559 | Msa0332560:intron | 40.0% | |
| TGGAGACAAAAGAAACTGCA+AGG | - | chr2_4:49667563-49667582 | Msa0332560:CDS | 40.0% | |
| !!! | TTGTCAAACTTTTGGGGTTG+TGG | - | chr2_4:49667671-49667690 | Msa0332560:CDS | 40.0% |
| !!! | TGTCAAACTTTTGGGGTTGT+GGG | - | chr2_4:49667672-49667691 | Msa0332560:CDS | 40.0% |
| AGTGTAATTAGCAACCAGCA+TGG | + | chr2_4:49667822-49667841 | None:intergenic | 40.0% | |
| ATCACAAAACGATCCTTCAG+CGG | + | chr2_4:49668067-49668086 | None:intergenic | 40.0% | |
| ! | CTGTGGCATTTGCCTATTTT+CGG | + | chr2_4:49668149-49668168 | None:intergenic | 40.0% |
| GAATATTTCTCGGCAATGGT+TGG | + | chr2_4:49668181-49668200 | None:intergenic | 40.0% | |
| AAACTGCTCGATTTCACCTT+TGG | + | chr2_4:49668217-49668236 | None:intergenic | 40.0% | |
| ! | TTGAAGATCGGTGCTTACTA+GGG | + | chr2_4:49668246-49668265 | None:intergenic | 40.0% |
| ! | TTTGAAGATCGGTGCTTACT+AGG | + | chr2_4:49668247-49668266 | None:intergenic | 40.0% |
| !!! | ACTCGGATCGTTTTGAAGAT+CGG | + | chr2_4:49668258-49668277 | None:intergenic | 40.0% |
| TCCGAGTATGCTGAATTCTA+TGG | - | chr2_4:49668271-49668290 | Msa0332560:intron | 40.0% | |
| TGAATTCTATGGATCTGGTG+AGG | - | chr2_4:49668282-49668301 | Msa0332560:intron | 40.0% | |
| AATCGAAGAGCCAGAAAGAA+CGG | - | chr2_4:49668323-49668342 | Msa0332560:intron | 40.0% | |
| GATCGTTATAATATGAGGGC+TGG | - | chr2_4:49668457-49668476 | Msa0332560:intron | 40.0% | |
| TTACTGAGAGTTGAATCGGA+AGG | + | chr2_4:49668500-49668519 | None:intergenic | 40.0% | |
| TATGGGTCAACATTAAGCAC+AGG | + | chr2_4:49668634-49668653 | None:intergenic | 40.0% | |
| !! | ACTCACAAGTGATTCGGTAT+GGG | + | chr2_4:49668651-49668670 | None:intergenic | 40.0% |
| !! | AACTCACAAGTGATTCGGTA+TGG | + | chr2_4:49668652-49668671 | None:intergenic | 40.0% |
| ! | GAGAGTTTTTCTGTCCATTG+TGG | + | chr2_4:49668715-49668734 | None:intergenic | 40.0% |
| GGATTTGAATTCAGGACCTT+TGG | - | chr2_4:49668768-49668787 | Msa0332560:CDS | 40.0% | |
| ATTCAGGACCTTTGGTTAAG+TGG | - | chr2_4:49668776-49668795 | Msa0332560:CDS | 40.0% | |
| GTCTCTTTCCACTTAACCAA+AGG | + | chr2_4:49668787-49668806 | None:intergenic | 40.0% | |
| GCATTTAGTCACAACATGCT+GGG | + | chr2_4:49668933-49668952 | None:intergenic | 40.0% | |
| AGCATTTAGTCACAACATGC+TGG | + | chr2_4:49668934-49668953 | None:intergenic | 40.0% | |
| !!! | GTTAGTTTTTCGAGGAGGGT+AGG | + | chr2_4:49663665-49663684 | None:intergenic | 45.0% |
| !! | CAGCGTGAGTTGGTTGAAAA+TGG | + | chr2_4:49663911-49663930 | None:intergenic | 45.0% |
| TGGTTGTGTTAGTTACCTGC+AGG | + | chr2_4:49663936-49663955 | None:intergenic | 45.0% | |
| TGAGTGTGGTGTCTTAGTAG+TGG | + | chr2_4:49664174-49664193 | None:intergenic | 45.0% | |
| ACTACTAAGACACCACACTC+AGG | - | chr2_4:49664173-49664192 | Msa0332560:CDS | 45.0% | |
| GTCGTGGAAGGAAATGAGAT+TGG | - | chr2_4:49664619-49664638 | Msa0332560:CDS | 45.0% | |
| TCAGAAACACGGATCCGATA+AGG | + | chr2_4:49664652-49664671 | None:intergenic | 45.0% | |
| ! | ATCCGTGTTTCTGAAGAGGA+TGG | - | chr2_4:49664658-49664677 | Msa0332560:CDS | 45.0% |
| CACCATCCTCTTCAGAAACA+CGG | + | chr2_4:49664663-49664682 | None:intergenic | 45.0% | |
| ! | AGTAGAGGAAGATTGGTAGC+TGG | - | chr2_4:49664943-49664962 | Msa0332560:intron | 45.0% |
| ! | GTAGAGGAAGATTGGTAGCT+GGG | - | chr2_4:49664944-49664963 | Msa0332560:intron | 45.0% |
| ! | ATTGGTAGCTGGGTCATTTC+AGG | - | chr2_4:49664954-49664973 | Msa0332560:intron | 45.0% |
| ! | TTGGTAGCTGGGTCATTTCA+GGG | - | chr2_4:49664955-49664974 | Msa0332560:intron | 45.0% |
| GCTCGGTTTAATCATCCCAA+AGG | - | chr2_4:49665012-49665031 | Msa0332560:intron | 45.0% | |
| ! | TCATCCCAAAGGCATAACCA+TGG | - | chr2_4:49665023-49665042 | Msa0332560:intron | 45.0% |
| AGCATCTCCGATCTTTCTGA+TGG | + | chr2_4:49665091-49665110 | None:intergenic | 45.0% | |
| ATCAGAAAGATCGGAGATGC+TGG | - | chr2_4:49665090-49665109 | Msa0332560:intron | 45.0% | |
| TTAGGTGTGACTACCATAGC+TGG | - | chr2_4:49665204-49665223 | Msa0332560:intron | 45.0% | |
| GGAGGAAAGTCAAATGTTGC+TGG | - | chr2_4:49665225-49665244 | Msa0332560:intron | 45.0% | |
| ! | AGTCAAATGTTGCTGGCTAC+AGG | - | chr2_4:49665232-49665251 | Msa0332560:intron | 45.0% |
| ! | GTCAAATGTTGCTGGCTACA+GGG | - | chr2_4:49665233-49665252 | Msa0332560:intron | 45.0% |
| GAGAACTTAGCATCCTCACT+AGG | + | chr2_4:49665264-49665283 | None:intergenic | 45.0% | |
| ATGACCAACAAGGAACAGGT+TGG | + | chr2_4:49665315-49665334 | None:intergenic | 45.0% | |
| TCGGAATCACGTGTTGCAAA+GGG | + | chr2_4:49665574-49665593 | None:intergenic | 45.0% | |
| ATCGGAATCACGTGTTGCAA+AGG | + | chr2_4:49665575-49665594 | None:intergenic | 45.0% | |
| GTCGTGGGTTCTGTCAATAA+AGG | + | chr2_4:49665835-49665854 | None:intergenic | 45.0% | |
| AGTTGAAACTCTCTCGTCCT+AGG | - | chr2_4:49665916-49665935 | Msa0332560:intron | 45.0% | |
| CAGTTACCCAAAAACGGATC+TGG | + | chr2_4:49665974-49665993 | None:intergenic | 45.0% | |
| ! | TTTCATTGTGGTGGTGATGC+TGG | - | chr2_4:49666134-49666153 | Msa0332560:intron | 45.0% |
| ! | AGTTGGAAAATGTGCTGCTG+AGG | - | chr2_4:49666177-49666196 | Msa0332560:intron | 45.0% |
| GGATCAACTTCCTTCATTGC+CGG | + | chr2_4:49666213-49666232 | None:intergenic | 45.0% | |
| TCCTCTCCATGAGATCTTTC+CGG | + | chr2_4:49666258-49666277 | None:intergenic | 45.0% | |
| AGTTGCGTCGAGAATGTTGT+TGG | - | chr2_4:49666325-49666344 | Msa0332560:intron | 45.0% | |
| AGAATGTTGTTGGCAGTGGT+GGG | - | chr2_4:49666335-49666354 | Msa0332560:intron | 45.0% | |
| !! | TGGTGGGTTAAGAAGAGAGA+AGG | - | chr2_4:49666351-49666370 | Msa0332560:intron | 45.0% |
| TGACCGAGTCAAAATCATGG+GGG | - | chr2_4:49666471-49666490 | Msa0332560:intron | 45.0% | |
| ! | TTAGCCCTTTTGCACAAGTC+TGG | + | chr2_4:49666497-49666516 | None:intergenic | 45.0% |
| ! | GGATGTCTAAGGTTAGCAAG+AGG | + | chr2_4:49666565-49666584 | None:intergenic | 45.0% |
| TGCATTGTGGTGCTTGATCT+TGG | - | chr2_4:49666709-49666728 | Msa0332560:intron | 45.0% | |
| !! | GCCACATGGACTAGATTTGT+AGG | - | chr2_4:49666810-49666829 | Msa0332560:intron | 45.0% |
| !!! | GTTGTTGGTGCTGTTTTGGT+TGG | - | chr2_4:49667157-49667176 | Msa0332560:intron | 45.0% |
| ACTACTTGAGTCCAACCACT+TGG | + | chr2_4:49667422-49667441 | None:intergenic | 45.0% | |
| TTCTAGTCAAGGATGAGGGT+CGG | + | chr2_4:49667481-49667500 | None:intergenic | 45.0% | |
| ! | CAAGTAATCTGGAATTCGGC+CGG | + | chr2_4:49667531-49667550 | None:intergenic | 45.0% |
| !! | CCTCTGGTTCTCAAGTAATC+TGG | + | chr2_4:49667542-49667561 | None:intergenic | 45.0% |
| CCAGATTACTTGAGAACCAG+AGG | - | chr2_4:49667539-49667558 | Msa0332560:intron | 45.0% | |
| ATTACTTGAGAACCAGAGGG+TGG | - | chr2_4:49667543-49667562 | Msa0332560:intron | 45.0% | |
| ! | TTTCTTTTGTCTCCACCCTC+TGG | + | chr2_4:49667558-49667577 | None:intergenic | 45.0% |
| !!! | GTCAAACTTTTGGGGTTGTG+GGG | - | chr2_4:49667673-49667692 | Msa0332560:CDS | 45.0% |
| GGGTTGTGGGGAAGAAAAAA+GGG | - | chr2_4:49667685-49667704 | Msa0332560:CDS | 45.0% | |
| TTGTCCAAAAGATGGCCATC+CGG | + | chr2_4:49667939-49667958 | None:intergenic | 45.0% | |
| ! | ATATCCCTTGAAGCTTTGGC+TGG | - | chr2_4:49667980-49667999 | Msa0332560:CDS | 45.0% |
| TCCAGCCTCCATTAGTCAAA+AGG | - | chr2_4:49668101-49668120 | Msa0332560:intron | 45.0% | |
| !! | TCCTTTTGACTAATGGAGGC+TGG | + | chr2_4:49668105-49668124 | None:intergenic | 45.0% |
| CGAAAATAGGCAAATGCCAC+AGG | - | chr2_4:49668147-49668166 | Msa0332560:intron | 45.0% | |
| ATGGTTGGAGTATGTACCTG+TGG | + | chr2_4:49668166-49668185 | None:intergenic | 45.0% | |
| TTCAGAAGCAAAGCCTCCAA+AGG | - | chr2_4:49668198-49668217 | Msa0332560:intron | 45.0% | |
| GGTGAAATCGAGCAGTTTCA+AGG | - | chr2_4:49668219-49668238 | Msa0332560:intron | 45.0% | |
| AGAAAGAACGGCCTAGACAT+CGG | - | chr2_4:49668335-49668354 | Msa0332560:intron | 45.0% | |
| ! | CAACTTCTCCGCTCTTTTCT+CGG | + | chr2_4:49668363-49668382 | None:intergenic | 45.0% |
| ! | TTTTCCGACAAATGGAGCTG+AGG | - | chr2_4:49668384-49668403 | Msa0332560:intron | 45.0% |
| TTAGCCTCAGCTCCATTTGT+CGG | + | chr2_4:49668391-49668410 | None:intergenic | 45.0% | |
| !! | TATGAGGGCTGGTTATGTAC+CGG | - | chr2_4:49668468-49668487 | Msa0332560:intron | 45.0% |
| TCATACCCAGCTTCGTAAAC+GGG | + | chr2_4:49668692-49668711 | None:intergenic | 45.0% | |
| GTCATACCCAGCTTCGTAAA+CGG | + | chr2_4:49668693-49668712 | None:intergenic | 45.0% | |
| GTAGTTGAGACTGTCGTGGA+AGG | - | chr2_4:49664607-49664626 | Msa0332560:CDS | 50.0% | |
| ! | TCGGATCCGTGTTTCTGAAG+AGG | - | chr2_4:49664654-49664673 | Msa0332560:CDS | 50.0% |
| ACCACCACTGTCTCAGTGTA+TGG | - | chr2_4:49664729-49664748 | Msa0332560:CDS | 50.0% | |
| TCAGGGCTACACTGATCATG+TGG | - | chr2_4:49664972-49664991 | Msa0332560:intron | 50.0% | |
| GGCTACACTGATCATGTGGA+TGG | - | chr2_4:49664976-49664995 | Msa0332560:intron | 50.0% | |
| ! | AATGTTGCTGGCTACAGGGA+CGG | - | chr2_4:49665237-49665256 | Msa0332560:intron | 50.0% |
| AATCACGTGTTGCAAAGGGG+CGG | + | chr2_4:49665570-49665589 | None:intergenic | 50.0% | |
| CGGAATCACGTGTTGCAAAG+GGG | + | chr2_4:49665573-49665592 | None:intergenic | 50.0% | |
| GGCACTTATTCAGAGGTCGT+GGG | + | chr2_4:49665850-49665869 | None:intergenic | 50.0% | |
| TGGCACTTATTCAGAGGTCG+TGG | + | chr2_4:49665851-49665870 | None:intergenic | 50.0% | |
| CGACCTCTGAATAAGTGCCA+TGG | - | chr2_4:49665851-49665870 | Msa0332560:intron | 50.0% | |
| CGTTTCGCTCTCGAATACCT+AGG | + | chr2_4:49665936-49665955 | None:intergenic | 50.0% | |
| GTAATAGAGCTACGAGAGGG+TGG | - | chr2_4:49666058-49666077 | Msa0332560:intron | 50.0% | |
| CTAAGCCGACCCATGATAGT+TGG | - | chr2_4:49666160-49666179 | Msa0332560:intron | 50.0% | |
| ! | TGGAAAATGTGCTGCTGAGG+AGG | - | chr2_4:49666180-49666199 | Msa0332560:intron | 50.0% |
| ! | GGAAAATGTGCTGCTGAGGA+GGG | - | chr2_4:49666181-49666200 | Msa0332560:intron | 50.0% |
| AGGGAGAAAACCGGCAATGA+AGG | - | chr2_4:49666200-49666219 | Msa0332560:intron | 50.0% | |
| ACCGGAAAGATCTCATGGAG+AGG | - | chr2_4:49666254-49666273 | Msa0332560:intron | 50.0% | |
| CTTCTGATCGATGAGCATGG+TGG | - | chr2_4:49666298-49666317 | Msa0332560:intron | 50.0% | |
| TGATCGATGAGCATGGTGGT+CGG | - | chr2_4:49666302-49666321 | Msa0332560:intron | 50.0% | |
| GTCGAGAATGTTGTTGGCAG+TGG | - | chr2_4:49666331-49666350 | Msa0332560:intron | 50.0% | |
| GAGAATGTTGTTGGCAGTGG+TGG | - | chr2_4:49666334-49666353 | Msa0332560:intron | 50.0% | |
| ACTTGCCAACTACACACACG+TGG | + | chr2_4:49666449-49666468 | None:intergenic | 50.0% | |
| !!! | TGGCCCCCATGATTTTGACT+CGG | + | chr2_4:49666477-49666496 | None:intergenic | 50.0% |
| ! | GGGAACATCTTTTGGCCACA+TGG | - | chr2_4:49666796-49666815 | Msa0332560:intron | 50.0% |
| TGCATGCTTCAGCAGGGATT+TGG | - | chr2_4:49667190-49667209 | Msa0332560:intron | 50.0% | |
| GGGGTTGTGGGGAAGAAAAA+AGG | - | chr2_4:49667684-49667703 | Msa0332560:CDS | 50.0% | |
| TGACAAACGCATGCCAATCC+CGG | - | chr2_4:49667895-49667914 | Msa0332560:CDS | 50.0% | |
| TCTTTACTGCTCTCCGGGAT+TGG | + | chr2_4:49667911-49667930 | None:intergenic | 50.0% | |
| AATCCCGGAGAGCAGTAAAG+AGG | - | chr2_4:49667910-49667929 | Msa0332560:CDS | 50.0% | |
| GATCCTCTTTACTGCTCTCC+GGG | + | chr2_4:49667916-49667935 | None:intergenic | 50.0% | |
| GGATCCTCTTTACTGCTCTC+CGG | + | chr2_4:49667917-49667936 | None:intergenic | 50.0% | |
| GAGAGCAGTAAAGAGGATCC+CGG | - | chr2_4:49667917-49667936 | Msa0332560:CDS | 50.0% | |
| TGTCCAAAAGATGGCCATCC+GGG | + | chr2_4:49667938-49667957 | None:intergenic | 50.0% | |
| TGCACCAGCCAAAGCTTCAA+GGG | + | chr2_4:49667987-49668006 | None:intergenic | 50.0% | |
| ATGCACCAGCCAAAGCTTCA+AGG | + | chr2_4:49667988-49668007 | None:intergenic | 50.0% | |
| ! | ATCCTTCAGCGGTGTTAGTC+CGG | + | chr2_4:49668056-49668075 | None:intergenic | 50.0% |
| CTGCTCGATTTCACCTTTGG+AGG | + | chr2_4:49668214-49668233 | None:intergenic | 50.0% | |
| GATGTCTAGGCCGTTCTTTC+TGG | + | chr2_4:49668336-49668355 | None:intergenic | 50.0% | |
| !!! | TTTTCTCGGTGCCGATGTCT+AGG | + | chr2_4:49668349-49668368 | None:intergenic | 50.0% |
| CTATGATCAACAGCTGCCCT+CGG | + | chr2_4:49668424-49668443 | None:intergenic | 50.0% | |
| !! | ATGAGGGCTGGTTATGTACC+GGG | - | chr2_4:49668469-49668488 | Msa0332560:intron | 50.0% |
| TTGAATCGGAAGGACTCTCC+CGG | + | chr2_4:49668490-49668509 | None:intergenic | 50.0% | |
| TGTATCCCCGTTTACGAAGC+TGG | - | chr2_4:49668683-49668702 | Msa0332560:intron | 50.0% | |
| GTATCCCCGTTTACGAAGCT+GGG | - | chr2_4:49668684-49668703 | Msa0332560:intron | 50.0% | |
| CATACCCAGCTTCGTAAACG+GGG | + | chr2_4:49668691-49668710 | None:intergenic | 50.0% | |
| GAAGCTGGGTATGACCACAA+TGG | - | chr2_4:49668698-49668717 | Msa0332560:intron | 50.0% | |
| AGGGTAGGGCGGTGATCAAA+AGG | + | chr2_4:49663650-49663669 | None:intergenic | 55.0% | |
| !!! | GTTTTTCGAGGAGGGTAGGG+CGG | + | chr2_4:49663661-49663680 | None:intergenic | 55.0% |
| GCCATACACTGAGACAGTGG+TGG | + | chr2_4:49664733-49664752 | None:intergenic | 55.0% | |
| GCAGCCATACACTGAGACAG+TGG | + | chr2_4:49664736-49664755 | None:intergenic | 55.0% | |
| GGTGTGACTACCATAGCTGG+AGG | - | chr2_4:49665207-49665226 | Msa0332560:intron | 55.0% | |
| TCGGCCAACCTGTTCCTTGT+TGG | - | chr2_4:49665308-49665327 | Msa0332560:intron | 55.0% | |
| CTGCTGAGGAGGGAGAAAAC+CGG | - | chr2_4:49666191-49666210 | Msa0332560:intron | 55.0% | |
| GGGGCCAGACTTGTGCAAAA+GGG | - | chr2_4:49666490-49666509 | Msa0332560:intron | 55.0% | |
| TGCCACATGCATGCTTCAGC+AGG | - | chr2_4:49667183-49667202 | Msa0332560:intron | 55.0% | |
| GCCACATGCATGCTTCAGCA+GGG | - | chr2_4:49667184-49667203 | Msa0332560:intron | 55.0% | |
| TCCCTGCTGAAGCATGCATG+TGG | + | chr2_4:49667188-49667207 | None:intergenic | 55.0% | |
| GCAGTAAAGAGGATCCCGGA+TGG | - | chr2_4:49667921-49667940 | Msa0332560:CDS | 55.0% | |
| ! | GATCCCGGATGGCCATCTTT+TGG | - | chr2_4:49667932-49667951 | Msa0332560:CDS | 55.0% |
| ! | GCGGTGTTAGTCCGGTATTC+CGG | + | chr2_4:49668048-49668067 | None:intergenic | 55.0% |
| TACCGGACTAACACCGCTGA+AGG | - | chr2_4:49668051-49668070 | Msa0332560:CDS | 55.0% | |
| ! | CATCGGCACCGAGAAAAGAG+CGG | - | chr2_4:49668352-49668371 | Msa0332560:intron | 55.0% |
| AGGCTAAACCTGTTGAGCCG+AGG | - | chr2_4:49668404-49668423 | Msa0332560:intron | 55.0% | |
| GGCTAAACCTGTTGAGCCGA+GGG | - | chr2_4:49668405-49668424 | Msa0332560:intron | 55.0% | |
| CTACAGGGACGGACCTAGTG+AGG | - | chr2_4:49665248-49665267 | Msa0332560:intron | 60.0% | |
| GGGGGCCAGACTTGTGCAAA+AGG | - | chr2_4:49666489-49666508 | Msa0332560:intron | 60.0% | |
| GGAGGCTGGACTTCGTCTTC+TGG | + | chr2_4:49668091-49668110 | None:intergenic | 60.0% | |
| CCTGCAGGAGCAGCGTGAGT+TGG | + | chr2_4:49663921-49663940 | None:intergenic | 65.0% | |
| CCAACTCACGCTGCTCCTGC+AGG | - | chr2_4:49663918-49663937 | Msa0332560:three_prime_UTR | 65.0% | |
| ACAGCTGCCCTCGGCTCAAC+AGG | + | chr2_4:49668415-49668434 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 49663629 | 49669026 | 49663629 | ID=Msa0332560;Name=Msa0332560 |
| chr2_4 | mRNA | 49663629 | 49669026 | 49663629 | ID=Msa0332560-mRNA-1;Parent=Msa0332560;Name=Msa0332560-mRNA-1;_AED=0.10;_eAED=0.10;_QI=208|0.6|0.83|1|1|1|6|507|474 |
| chr2_4 | exon | 49663629 | 49664798 | 49663629 | ID=Msa0332560-mRNA-1:exon:14892;Parent=Msa0332560-mRNA-1 |
| chr2_4 | exon | 49665421 | 49665509 | 49665421 | ID=Msa0332560-mRNA-1:exon:14891;Parent=Msa0332560-mRNA-1 |
| chr2_4 | exon | 49667238 | 49667447 | 49667238 | ID=Msa0332560-mRNA-1:exon:14890;Parent=Msa0332560-mRNA-1 |
| chr2_4 | exon | 49667544 | 49667714 | 49667544 | ID=Msa0332560-mRNA-1:exon:14889;Parent=Msa0332560-mRNA-1 |
| chr2_4 | exon | 49667892 | 49668080 | 49667892 | ID=Msa0332560-mRNA-1:exon:14888;Parent=Msa0332560-mRNA-1 |
| chr2_4 | exon | 49668716 | 49669026 | 49668716 | ID=Msa0332560-mRNA-1:exon:14887;Parent=Msa0332560-mRNA-1 |
| chr2_4 | five_prime_UTR | 49668819 | 49669026 | 49668819 | ID=Msa0332560-mRNA-1:five_prime_utr;Parent=Msa0332560-mRNA-1 |
| chr2_4 | CDS | 49668716 | 49668818 | 49668716 | ID=Msa0332560-mRNA-1:cds;Parent=Msa0332560-mRNA-1 |
| chr2_4 | CDS | 49667892 | 49668080 | 49667892 | ID=Msa0332560-mRNA-1:cds;Parent=Msa0332560-mRNA-1 |
| chr2_4 | CDS | 49667544 | 49667714 | 49667544 | ID=Msa0332560-mRNA-1:cds;Parent=Msa0332560-mRNA-1 |
| chr2_4 | CDS | 49667238 | 49667447 | 49667238 | ID=Msa0332560-mRNA-1:cds;Parent=Msa0332560-mRNA-1 |
| chr2_4 | CDS | 49665421 | 49665509 | 49665421 | ID=Msa0332560-mRNA-1:cds;Parent=Msa0332560-mRNA-1 |
| chr2_4 | CDS | 49664136 | 49664798 | 49664136 | ID=Msa0332560-mRNA-1:cds;Parent=Msa0332560-mRNA-1 |
| chr2_4 | three_prime_UTR | 49663629 | 49664135 | 49663629 | ID=Msa0332560-mRNA-1:three_prime_utr;Parent=Msa0332560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
