AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259020 MtrunA17_Chr2g0321841 90.940 298 25 2 1 297 387 683 0.0 531
Msa0259020 MtrunA17_Chr4g0025671 49.201 313 136 6 1 292 371 681 4.31e-62 213
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259020 AT3G44200.2 36.287 237 144 7 1 233 391 624 3.32e-20 92.4
Msa0259020 AT3G44200.1 36.287 237 144 7 1 233 391 624 3.32e-20 92.4

Find 243 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTCTTGTAAAACTTTC+TGG 0.056366 2_2:+55792100 None:intergenic
CTCAAATACTATTGATAATT+TGG 0.084649 2_2:-55791812 Msa0259020:three_prime_UTR
CAGAGCAATTTGAAGATTTA+AGG 0.096427 2_2:+55791851 None:intergenic
GATATTTACATAGGGGATTT+TGG 0.107198 2_2:-55796989 Msa0259020:intron
AAACATTCACTTTCCATTTC+TGG 0.153915 2_2:-55792297 Msa0259020:CDS
ACTTAAGCCACCCTCATTTC+TGG 0.158535 2_2:-55792900 Msa0259020:CDS
ACTTTATGAGGCCTATTATT+TGG 0.161911 2_2:+55792237 None:intergenic
AACCTCCTGTTTATCTGTTT+TGG 0.180009 2_2:+55793454 None:intergenic
ATGGATTCAAATCTGATATT+TGG 0.209089 2_2:-55795792 Msa0259020:five_prime_UTR
AGAGGGAAATGGTTTATTTA+TGG 0.210493 2_2:+55799624 None:intergenic
AAATCAGATTTCGGTGTTAA+TGG 0.223289 2_2:-55793242 Msa0259020:CDS
TTCTCAGTTGATTCCATTAC+TGG 0.231813 2_2:+55791958 None:intergenic
TGAACATAAGGCTGCAAATA+AGG 0.242452 2_2:+55793751 None:intergenic
CTGCTTACAGATATTCCTTA+TGG 0.246100 2_2:-55795811 Msa0259020:five_prime_UTR
TCTTTATCATTTGCTGCATT+TGG 0.249403 2_2:+55792848 None:intergenic
GGACCTGATGAAAATATTTC+TGG 0.250986 2_2:-55792542 Msa0259020:CDS
CTATTATTTGGCAAGCTTAC+TGG 0.257808 2_2:+55792249 None:intergenic
TGCTATGTTTGCATTGTTAC+TGG 0.258692 2_2:-55797580 Msa0259020:five_prime_UTR
GATATGTGTTGAAGAAAATT+AGG 0.281318 2_2:-55799089 Msa0259020:five_prime_UTR
GGAATATCTGTAAGCAGTTC+AGG 0.284465 2_2:+55795817 None:intergenic
AATAGTTCGTGTAGTGAAAA+AGG 0.295155 2_2:-55793625 Msa0259020:five_prime_UTR
AATGGTTTATTTATGGTTAG+AGG 0.298369 2_2:+55799631 None:intergenic
TTGTTATATTTAGCGAAATC+AGG 0.305724 2_2:+55791718 None:intergenic
AATAAACACACACATGAATA+TGG 0.312518 2_2:-55791179 Msa0259020:three_prime_UTR
TGGTTGGCCAAGAGTCTAAA+AGG 0.312931 2_2:-55791496 Msa0259020:three_prime_UTR
TAGTAAGGTTTCTTTATTCT+TGG 0.319864 2_2:-55791442 Msa0259020:three_prime_UTR
CACAGGAAAACACTGATAAA+AGG 0.320656 2_2:-55793922 Msa0259020:intron
CAGATCGGTCGCGGTGCATT+TGG 0.321180 2_2:-55799247 Msa0259020:five_prime_UTR
TGATTAAAACTCCCATGTTC+AGG 0.329512 2_2:+55792599 None:intergenic
CCTCAAGGGAGACAGCTATT+TGG 0.331225 2_2:-55791516 Msa0259020:three_prime_UTR
TTACAAGGATGGAGAATAAC+AGG 0.337464 2_2:+55794292 None:intergenic
ATTTGTTGCGATTGGCCTAA+TGG 0.339614 2_2:-55791216 Msa0259020:three_prime_UTR
ATGAAGAGAGAGAAAGTAAG+AGG 0.341199 2_2:+55799606 None:intergenic
TACTTTCTCATTACGAGTTA+TGG 0.342562 2_2:+55792484 None:intergenic
TCATCTTCAGTCTCTGTTCA+AGG 0.344257 2_2:-55792677 Msa0259020:CDS
TTGAGTATGTGTTAGCCATT+AGG 0.344747 2_2:+55791201 None:intergenic
ATAAACAAGAATACCTCTTC+AGG 0.352809 2_2:+55797387 None:intergenic
CAGTAAGCTTGCCAAATAAT+AGG 0.355017 2_2:-55792248 Msa0259020:exon
AGAGCAATTTGAAGATTTAA+GGG 0.358746 2_2:+55791852 None:intergenic
TTTGGCTGTGCAGAAACTTC+AGG 0.365199 2_2:+55792944 None:intergenic
TCTGCTACTACTTGTTTGAT+AGG 0.366933 2_2:+55792968 None:intergenic
TTCTGAAAAGTTGGTGTAAA+CGG 0.371230 2_2:+55792509 None:intergenic
AGTAGGGGACGTAGTTAGTA+AGG 0.378318 2_2:-55791457 Msa0259020:three_prime_UTR
AAAGTTGGCACCTCTACATT+AGG 0.381919 2_2:+55793212 None:intergenic
CAACATTAGATTTGTGTTCA+AGG 0.383815 2_2:+55793417 None:intergenic
AGCAGACGATTTAACTTCTT+CGG 0.383960 2_2:-55796948 Msa0259020:intron
AAGATCAACCGTTCCTCTAT+TGG 0.386977 2_2:-55794326 Msa0259020:five_prime_UTR
AAGTGCATCCGCTCTCTGTT+TGG 0.387223 2_2:+55791633 None:intergenic
CTTAAGCCACCCTCATTTCT+GGG 0.391533 2_2:-55792899 Msa0259020:CDS
TGGAGTAATTGCGTTGATTA+CGG 0.393655 2_2:+55799530 None:intergenic
TTAACACCGAAATCTGATTT+CGG 0.398389 2_2:+55793245 None:intergenic
AAATATTTGTAACAGGTTGT+AGG 0.401428 2_2:-55795859 Msa0259020:intron
CTTACTGTTGGACGATGCTC+GGG 0.402362 2_2:+55793883 None:intergenic
TTGCTCAGAAACTCTGCAAA+TGG 0.403933 2_2:-55797296 Msa0259020:intron
TCCTTACATTGTTGAATTCA+AGG 0.404289 2_2:-55798695 Msa0259020:five_prime_UTR
GATGTCTCATCTTAGCCTCC+TGG 0.404571 2_2:+55792801 None:intergenic
GCAGTTGTTCTCAAGCCCTT+TGG 0.409875 2_2:-55791553 Msa0259020:three_prime_UTR
CAAACAACTACATCTGATTC+CGG 0.411034 2_2:-55792407 Msa0259020:CDS
TACTATTTACAGCATCATAA+AGG 0.411899 2_2:+55791283 None:intergenic
AAATTTCCGAAATCAGATTT+CGG 0.413272 2_2:-55793251 Msa0259020:CDS
TTTGATTTCTTGTGTGACTT+TGG 0.418815 2_2:+55792365 None:intergenic
CAATGCCAAAACAGATAAAC+AGG 0.423118 2_2:-55793459 Msa0259020:five_prime_UTR
GCTGGTTGTTTGCATTCCTT+TGG 0.425025 2_2:+55792712 None:intergenic
TAGAGCTATTTCTTTCTCTA+CGG 0.426744 2_2:+55793489 None:intergenic
TGTTGAATTCAAGGAAGCTT+GGG 0.428167 2_2:-55798686 Msa0259020:five_prime_UTR
CAAGAGTCTAAAAGGATTGA+TGG 0.429192 2_2:-55791488 Msa0259020:three_prime_UTR
TCCTTGAATTCAACAATGTA+AGG 0.429200 2_2:+55798694 None:intergenic
AATGCCAGAAAAGGAATCAT+TGG 0.429595 2_2:-55791668 Msa0259020:three_prime_UTR
CTTTCTCTACGGGCATGATA+AGG 0.430469 2_2:+55793500 None:intergenic
TTTGGCAGGCTAACTTTATG+AGG 0.436653 2_2:+55792225 None:intergenic
ATAAGGGTGCTTTAAGATAT+CGG 0.437476 2_2:+55793768 None:intergenic
TTCATCAGACTCCCTCTCAT+TGG 0.438191 2_2:+55793320 None:intergenic
AAGGTTTCTTTATTCTTGGT+TGG 0.440792 2_2:-55791438 Msa0259020:three_prime_UTR
AAACAGATAAACAGGAGGTT+AGG 0.444849 2_2:-55793451 Msa0259020:five_prime_UTR
TTTGCTGCAGCAAAATAGAT+TGG 0.444854 2_2:-55791584 Msa0259020:three_prime_UTR
GAGAGAAAGTAAGAGGGAAA+TGG 0.445007 2_2:+55799613 None:intergenic
GTTGAGATGCACATAAGCTT+TGG 0.450902 2_2:+55792207 None:intergenic
AAGCTTATGTGCATCTCAAC+TGG 0.451241 2_2:-55792204 Msa0259020:three_prime_UTR
GTTCTCAAGCCCTTTGGAAA+AGG 0.451584 2_2:-55791547 Msa0259020:three_prime_UTR
GATAGTTAAGAATGCAAAGA+TGG 0.452260 2_2:-55793378 Msa0259020:exon
GAACAATATTGATGAACATA+AGG 0.453885 2_2:+55793739 None:intergenic
GATTGATGGTTGAGGAAAGT+AGG 0.456243 2_2:-55791474 Msa0259020:three_prime_UTR
GAACATAAGGCTGCAAATAA+GGG 0.456479 2_2:+55793752 None:intergenic
TGTTTCTAGAGAGCCTTTGA+AGG 0.461345 2_2:-55792750 Msa0259020:CDS
TCATTCTGCAAAACGAATCC+AGG 0.465479 2_2:-55793168 Msa0259020:CDS
AAATCTGATATTTGGTCCCT+AGG 0.465642 2_2:-55795784 Msa0259020:intron
GCAACAGAAAGACCAGCTTC+TGG 0.465675 2_2:-55792054 Msa0259020:three_prime_UTR
TGCATTTGGCATATCATGCC+CGG 0.465754 2_2:+55792862 None:intergenic
ATTGATGGTTGAGGAAAGTA+GGG 0.467294 2_2:-55791473 Msa0259020:three_prime_UTR
TTTAATCACACTGAAATTGT+GGG 0.470350 2_2:-55792584 Msa0259020:CDS
CAGAGAGCGGATGCACTTGA+AGG 0.470476 2_2:-55791628 Msa0259020:three_prime_UTR
ATGGTTTATTTATGGTTAGA+GGG 0.472538 2_2:+55799632 None:intergenic
ACGTTCATTCATTTCTCAAA+CGG 0.472695 2_2:-55799403 Msa0259020:five_prime_UTR
ACAGTGTACTAATTAATTAG+TGG 0.473175 2_2:+55799510 None:intergenic
CATCGAGAGCTCGGGGAAGA+TGG 0.475367 2_2:+55792031 None:intergenic
CAGTTCAGGGCACATATAGT+TGG 0.475940 2_2:+55795831 None:intergenic
AGAGCTATTTCTTTCTCTAC+GGG 0.476099 2_2:+55793490 None:intergenic
TGAAGAGGAAATGCCAGAAA+AGG 0.476529 2_2:-55791677 Msa0259020:three_prime_UTR
CTTACAAAAGCTTTGAAAGC+AGG 0.477154 2_2:+55795658 None:intergenic
GGATGACATCATCGAGAGCT+CGG 0.483712 2_2:+55792022 None:intergenic
ATCACATACTTCAAAACATC+AGG 0.483771 2_2:-55793144 Msa0259020:intron
CTTATTGCGTCCCAGAAATG+AGG 0.492643 2_2:+55792889 None:intergenic
GATGGGACCAAAACATGAAA+AGG 0.492866 2_2:-55793360 Msa0259020:CDS
TTGTTGAATTCAAGGAAGCT+TGG 0.493531 2_2:-55798687 Msa0259020:five_prime_UTR
AGATGAAACAGAATTGTTGC+TGG 0.494410 2_2:+55792694 None:intergenic
CGGGGAAGATGGCCAGAAGC+TGG 0.496088 2_2:+55792042 None:intergenic
GATTTAGAAATGAGAAATGT+GGG 0.496580 2_2:-55791886 Msa0259020:three_prime_UTR
TGAGTGATCCAGAGTTAACC+TGG 0.496820 2_2:+55792457 None:intergenic
GATGACATCATCGAGAGCTC+GGG 0.500494 2_2:+55792023 None:intergenic
CGTTTCAAAAGCAGCACCAA+AGG 0.502236 2_2:-55793578 Msa0259020:five_prime_UTR
ATCACAAGGTGGAGAAGAAA+CGG 0.503214 2_2:-55799207 Msa0259020:intron
GCAAAACAAAATTTGAATGC+AGG 0.504301 2_2:+55797244 None:intergenic
ATATCAGATTTGAATCCATA+AGG 0.504645 2_2:+55795796 None:intergenic
GTTATGGTATTCTGAAAAGT+TGG 0.504816 2_2:+55792500 None:intergenic
GCATCTTGCTCTTCAACGCC+AGG 0.504860 2_2:+55791748 None:intergenic
GAGGGTGGCTTAAGTAGGCT+TGG 0.506069 2_2:+55792908 None:intergenic
ATGATTAATTATGTTGGTTG+TGG 0.508073 2_2:+55799470 None:intergenic
CTTGAATTAAGAGAACAAAC+AGG 0.508307 2_2:-55791351 Msa0259020:three_prime_UTR
GATGGATCAGTATGAGATCA+TGG 0.508417 2_2:-55799272 Msa0259020:five_prime_UTR
ACTTACTGTTGGACGATGCT+CGG 0.510311 2_2:+55793882 None:intergenic
TGCTCAGAAACTCTGCAAAT+GGG 0.511364 2_2:-55797295 Msa0259020:intron
GAATATCTGTAAGCAGTTCA+GGG 0.511746 2_2:+55795818 None:intergenic
ATTTGCAATGATGTCTAAGA+TGG 0.512474 2_2:-55799290 Msa0259020:five_prime_UTR
AACTGGTGATGACAAATTCA+TGG 0.513357 2_2:-55792187 Msa0259020:three_prime_UTR
AGTAAGTCCCAGGTTAACTC+TGG 0.514549 2_2:-55792465 Msa0259020:CDS
TGTTATATTTAGCGAAATCA+GGG 0.515384 2_2:+55791719 None:intergenic
AGTTCAGGGCACATATAGTT+GGG 0.516313 2_2:+55795832 None:intergenic
CAAGGAAGCTTGGGTTGAGA+AGG 0.516389 2_2:-55798677 Msa0259020:intron
TTCATCAGGTCCACTACTGT+TGG 0.516870 2_2:+55792553 None:intergenic
AAGGATCATGATGTTCGCTT+AGG 0.516900 2_2:-55797091 Msa0259020:intron
ATGCAGCAAATGATAAAGAA+AGG 0.517256 2_2:-55792844 Msa0259020:CDS
CAAGCCCTTTGGAAAAGGTA+AGG 0.518547 2_2:-55791542 Msa0259020:three_prime_UTR
AGATGCACATAAGCTTTGGC+AGG 0.522574 2_2:+55792211 None:intergenic
TTATACGCCATAGCAGTTAC+CGG 0.522768 2_2:-55791996 Msa0259020:three_prime_UTR
GGCATTTCCTCTTCAGCTGT+AGG 0.526388 2_2:+55791685 None:intergenic
TAGCCTTCCTACAGCTGAAG+AGG 0.526685 2_2:-55791692 Msa0259020:three_prime_UTR
GTTTGTTCTCTTAATTCAAG+TGG 0.529657 2_2:+55791354 None:intergenic
GCCATAGCAGTTACCGGGTA+GGG 0.530520 2_2:-55791990 Msa0259020:three_prime_UTR
CTACTTTCAAAAGCCTTCAA+AGG 0.530710 2_2:+55792737 None:intergenic
CTTGAACACAAATCTAATGT+TGG 0.532695 2_2:-55793416 Msa0259020:five_prime_UTR
TTTGAAGATTTAAGGGACAA+AGG 0.533872 2_2:+55791859 None:intergenic
TGAATTTCAAAGCATTGTAA+CGG 0.533931 2_2:+55799340 None:intergenic
TACACTCATCAACGTTGTAA+AGG 0.534911 2_2:-55791911 Msa0259020:three_prime_UTR
TTTACAAGAAGAGAAGGGAA+TGG 0.535007 2_2:-55792091 Msa0259020:three_prime_UTR
TGAAGAGAGAGAAAGTAAGA+GGG 0.536245 2_2:+55799607 None:intergenic
TGATTTAGAAATGAGAAATG+TGG 0.537615 2_2:-55791887 Msa0259020:three_prime_UTR
AATTAGGCTTGCAAGGCAAA+CGG 0.539375 2_2:-55799073 Msa0259020:five_prime_UTR
TAAGCGAACATCATGATCCT+TGG 0.539497 2_2:+55797093 None:intergenic
GGGAGGCAAAGTACCAATAG+AGG 0.541874 2_2:+55794313 None:intergenic
ATGTCTCATCTTAGCCTCCT+GGG 0.542261 2_2:+55792802 None:intergenic
AAAGTAGAAACTTACAAGGA+TGG 0.543494 2_2:+55794281 None:intergenic
GCAATGATGATTAATTATGT+TGG 0.544664 2_2:+55799464 None:intergenic
AATGAGAGGGAGTCTGATGA+AGG 0.545272 2_2:-55793318 Msa0259020:CDS
CTGGGACGCAATAAGCAAGC+CGG 0.547616 2_2:-55792881 Msa0259020:CDS
TGGGACGCAATAAGCAAGCC+GGG 0.548530 2_2:-55792880 Msa0259020:CDS
TTACAAAAGCTTTGAAAGCA+GGG 0.548759 2_2:+55795659 None:intergenic
GAAATGAGGGTGGCTTAAGT+AGG 0.549253 2_2:+55792903 None:intergenic
AGTAATGGAATCAACTGAGA+AGG 0.550186 2_2:-55791956 Msa0259020:three_prime_UTR
TGAAGAAAATTAGGCTTGCA+AGG 0.551006 2_2:-55799080 Msa0259020:five_prime_UTR
ACATGTGGCAGATGACCGTT+AGG 0.553212 2_2:+55792770 None:intergenic
TCCCTACCCGGTAACTGCTA+TGG 0.553321 2_2:+55791989 None:intergenic
ATGGGTTACTCAATTACTGT+TGG 0.555806 2_2:-55797277 Msa0259020:five_prime_UTR
TTCTAACATCTTTCTTACCA+AGG 0.557243 2_2:-55797110 Msa0259020:five_prime_UTR
GATTAAAACTCCCATGTTCA+GGG 0.557748 2_2:+55792600 None:intergenic
TGGGGCTTACTTTCCTGAAG+AGG 0.558065 2_2:-55797400 Msa0259020:intron
AACTGCTATGGCGTATAACA+TGG 0.559388 2_2:+55792001 None:intergenic
TTTGGTGTAGGTTCTATCAT+CGG 0.559432 2_2:+55793028 None:intergenic
ATTAAAACTCCCATGTTCAG+GGG 0.561553 2_2:+55792601 None:intergenic
TTTCCTCTTCAGCTGTAGGA+AGG 0.562670 2_2:+55791689 None:intergenic
GGTGGCTTAAGTAGGCTTGG+AGG 0.564875 2_2:+55792911 None:intergenic
AGGGAGTGATCTTCCAGTAA+TGG 0.565681 2_2:-55791971 Msa0259020:three_prime_UTR
TCTAAAAGGATTGATGGTTG+AGG 0.567989 2_2:-55791482 Msa0259020:three_prime_UTR
AGGGAGGATACACCGACAGC+TGG 0.568505 2_2:+55799651 None:intergenic
GCTGCAGCAAAATAGATTGG+AGG 0.571472 2_2:-55791581 Msa0259020:three_prime_UTR
CTGGAAGATCACTCCCTACC+CGG 0.572422 2_2:+55791977 None:intergenic
GTTTCAAAAGCAGCACCAAA+GGG 0.572935 2_2:-55793577 Msa0259020:five_prime_UTR
ATAGTTAAGAATGCAAAGAT+GGG 0.573852 2_2:-55793377 Msa0259020:exon
TCAAGTATTTCTGAACATCC+TGG 0.576432 2_2:-55791766 Msa0259020:three_prime_UTR
AAGGGAGACAGCTATTTGGT+TGG 0.577031 2_2:-55791512 Msa0259020:three_prime_UTR
GAGGTAGACCTGTCATCGAT+TGG 0.581199 2_2:-55793538 Msa0259020:five_prime_UTR
AGACATCATCGGTTGCCTAA+CGG 0.582304 2_2:-55792785 Msa0259020:CDS
AGAGAGCGGATGCACTTGAA+GGG 0.587056 2_2:-55791627 Msa0259020:three_prime_UTR
CACTGATAAAAGGCATGTTG+AGG 0.588530 2_2:-55793912 Msa0259020:five_prime_UTR
CTACATCTGATTCCGGTGAG+TGG 0.590622 2_2:-55792400 Msa0259020:CDS
GTTTATTTATGGTTAGAGGG+AGG 0.591160 2_2:+55799635 None:intergenic
GGATCACGTGCCAACAGTAG+TGG 0.593302 2_2:-55792563 Msa0259020:CDS
TCTTGTGTGACTTTGGCAGA+CGG 0.594755 2_2:+55792372 None:intergenic
GAGATGAGTTCTCCAATGAG+AGG 0.596694 2_2:-55793332 Msa0259020:CDS
AGATGAGTTCTCCAATGAGA+GGG 0.598649 2_2:-55793331 Msa0259020:CDS
AGATACAAATAAAATAGCCC+AGG 0.599130 2_2:-55792819 Msa0259020:CDS
TGGTTTGAAGCCTAATGTAG+AGG 0.600008 2_2:-55793222 Msa0259020:CDS
ATCATGGAGCAGATCGGTCG+CGG 0.601471 2_2:-55799256 Msa0259020:five_prime_UTR
GAAAAGGTAAGGTCTCCTCA+AGG 0.606367 2_2:-55791531 Msa0259020:three_prime_UTR
TACAAATAAAATAGCCCAGG+AGG 0.608281 2_2:-55792816 Msa0259020:CDS
GGAGTTACAAACGTAGATGT+TGG 0.608825 2_2:-55791934 Msa0259020:three_prime_UTR
GTAATGAGAAAGTAAGTCCC+AGG 0.608907 2_2:-55792475 Msa0259020:CDS
AGAGGGAGTCTGATGAAGGC+TGG 0.610900 2_2:-55793314 Msa0259020:CDS
GGCTTGCAAGGCAAACGGAA+CGG 0.612990 2_2:-55799068 Msa0259020:five_prime_UTR
CATGTAATACCTTTAGGTCA+CGG 0.613771 2_2:+55797220 None:intergenic
CAGACGGAACATCCACTCAC+CGG 0.613935 2_2:+55792388 None:intergenic
CGCCATAGCAGTTACCGGGT+AGG 0.615638 2_2:-55791991 Msa0259020:three_prime_UTR
CCAAATAGCTGTCTCCCTTG+AGG 0.618117 2_2:+55791516 None:intergenic
TGCAATTCTCGTTAATCACA+AGG 0.621694 2_2:-55799221 Msa0259020:five_prime_UTR
CATTCTGCAAAACGAATCCA+GGG 0.622466 2_2:-55793167 Msa0259020:CDS
GGTGGTGTCACCTTATGTCG+AGG 0.622909 2_2:+55792998 None:intergenic
AAAAGGTAAGGTCTCCTCAA+GGG 0.624519 2_2:-55791530 Msa0259020:three_prime_UTR
TAGAAGATCTGCTCATCAAG+AGG 0.632586 2_2:-55799043 Msa0259020:intron
TATGAGATCATGGAGCAGAT+CGG 0.633426 2_2:-55799262 Msa0259020:five_prime_UTR
TTATTGCGTCCCAGAAATGA+GGG 0.635494 2_2:+55792890 None:intergenic
GTAATGGAATCAACTGAGAA+GGG 0.635839 2_2:-55791955 Msa0259020:three_prime_UTR
AGGCTAAGATGAGACATCAT+CGG 0.641986 2_2:-55792796 Msa0259020:CDS
TAAATCTTCCAAACAGAGAG+CGG 0.642979 2_2:-55791641 Msa0259020:three_prime_UTR
TTACTGTTGGACGATGCTCG+GGG 0.645160 2_2:+55793884 None:intergenic
TATACGCCATAGCAGTTACC+GGG 0.646342 2_2:-55791995 Msa0259020:three_prime_UTR
AGGGTGTTGTATATATGAGA+TGG 0.651306 2_2:-55795692 Msa0259020:five_prime_UTR
ATTGTTACTGGATACTGTGA+AGG 0.653515 2_2:-55797568 Msa0259020:five_prime_UTR
AAAGGCTCTCTAGAAACATG+TGG 0.658063 2_2:+55792755 None:intergenic
TGATGACAAATTCATGGTGA+GGG 0.659209 2_2:-55792181 Msa0259020:three_prime_UTR
ACTGTTTCTCACTCTCACGC+TGG 0.661546 2_2:+55799442 None:intergenic
GTTACTGGATACTGTGAAGG+TGG 0.662740 2_2:-55797565 Msa0259020:five_prime_UTR
GCAAAGTACCAATAGAGGAA+CGG 0.665130 2_2:+55794318 None:intergenic
ATGTTGGATCTAAGCAAGCA+AGG 0.669645 2_2:-55793400 Msa0259020:five_prime_UTR
AAAAGTTGGTGTAAACGGAG+AGG 0.671095 2_2:+55792514 None:intergenic
TTAAAACTCCCATGTTCAGG+GGG 0.672609 2_2:+55792602 None:intergenic
GTGATGACAAATTCATGGTG+AGG 0.673342 2_2:-55792182 Msa0259020:three_prime_UTR
ATGACATCATCGAGAGCTCG+GGG 0.674350 2_2:+55792024 None:intergenic
TGATTTCGGAAATTTACACA+AGG 0.675327 2_2:+55793259 None:intergenic
GCAGTTGAAAGACCAGCTGT+CGG 0.680052 2_2:-55799663 Msa0259020:five_prime_UTR
GGGAGTCTGATGAAGGCTGG+TGG 0.682694 2_2:-55793311 Msa0259020:CDS
GAGTGATCCAGAGTTAACCT+GGG 0.687311 2_2:+55792458 None:intergenic
TGCCAAAACAGATAAACAGG+AGG 0.687360 2_2:-55793456 Msa0259020:five_prime_UTR
AGGAGCAATTTCAGCCACTG+AGG 0.690173 2_2:+55792149 None:intergenic
TTGCGTCCCAGAAATGAGGG+TGG 0.690369 2_2:+55792893 None:intergenic
TACAAGGATGGAGAATAACA+GGG 0.698758 2_2:+55794293 None:intergenic
ACTTGTTTGATAGGACCACA+TGG 0.709845 2_2:+55792977 None:intergenic
TTGATGGTTGAGGAAAGTAG+GGG 0.721472 2_2:-55791472 Msa0259020:three_prime_UTR
CAAAAGCTTTGAAAGCAGGG+CGG 0.736231 2_2:+55795662 None:intergenic
CATAAGGTGACACCACCATG+TGG 0.750878 2_2:-55792992 Msa0259020:CDS
GGGTGATGACAAAATCACTG+AGG 0.760210 2_2:-55793557 Msa0259020:five_prime_UTR
GAGGGAAAGAGTGTCCTCAG+TGG 0.761042 2_2:-55792163 Msa0259020:three_prime_UTR
AAGGATGGAGAATAACAGGG+AGG 0.783691 2_2:+55794296 None:intergenic
AATTCTCGTTAATCACAAGG+TGG 0.786959 2_2:-55799218 Msa0259020:five_prime_UTR
TGTTTGATAGGACCACATGG+TGG 0.804449 2_2:+55792980 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATAAACAACTTTTAAA+AGG + chr2_2:55792516-55792535 None:intergenic 10.0%
!! TTTAAAAGTTGTTTATAATT+AGG - chr2_2:55792516-55792535 Msa0259020:CDS 10.0%
!! TTAAAAGTTGTTTATAATTA+GGG - chr2_2:55792517-55792536 Msa0259020:CDS 10.0%
!!! TAGTATTAATTTTCTTTTTT+AGG - chr2_2:55792570-55792589 Msa0259020:CDS 10.0%
!!! TGTATTTTTGTTAAATATTT+TGG - chr2_2:55793496-55793515 Msa0259020:five_prime_UTR 10.0%
!! ATAACAAAAAGTAAAAATAA+AGG + chr2_2:55794471-55794490 None:intergenic 10.0%
!! TAAAGTTAAAAAAAAACTAT+GGG + chr2_2:55795443-55795462 None:intergenic 10.0%
!! ATAAAGTTAAAAAAAAACTA+TGG + chr2_2:55795444-55795463 None:intergenic 10.0%
!!! AAAAAAAACAATTTTTTATG+TGG + chr2_2:55796842-55796861 None:intergenic 10.0%
!! AATAGTGTAATATATTGTAT+TGG - chr2_2:55792351-55792370 Msa0259020:CDS 15.0%
!!! AAAATAATTTTGGCAAATAA+AGG - chr2_2:55792714-55792733 Msa0259020:CDS 15.0%
!!! ATTGTTTTACTTTTATTGTA+GGG - chr2_2:55793236-55793255 Msa0259020:CDS 15.0%
!! ATCTCAAATGTAATAAAAAA+TGG + chr2_2:55793787-55793806 None:intergenic 15.0%
!! TAATTTCTGATATTTACATA+GGG - chr2_2:55793843-55793862 Msa0259020:intron 15.0%
!! TATTGAAAAAATAACTGATT+AGG + chr2_2:55794324-55794343 None:intergenic 15.0%
!! AAGAGAAAAAATATATTCAT+AGG + chr2_2:55794494-55794513 None:intergenic 15.0%
!!! TGAATATATTTTTTCTCTTT+TGG - chr2_2:55794495-55794514 Msa0259020:intron 15.0%
!!! GAATATATTTTTTCTCTTTT+GGG - chr2_2:55794496-55794515 Msa0259020:intron 15.0%
!! GAAAATAAAAAAATTACCTA+GGG + chr2_2:55795075-55795094 None:intergenic 15.0%
!! TCTGTTATTATAGTATATTA+CGG + chr2_2:55795250-55795269 None:intergenic 15.0%
!!! ATGAATATTTTGTAATCTTT+AGG - chr2_2:55795464-55795483 Msa0259020:intron 15.0%
!!! TATTTTTATGGTAATCTTTA+TGG - chr2_2:55795869-55795888 Msa0259020:intron 15.0%
!!! AATCTTAAATTTGCTAATTT+TGG + chr2_2:55795997-55796016 None:intergenic 15.0%
!! AATTTATGCATAATTGAATT+AGG - chr2_2:55796079-55796098 Msa0259020:intron 15.0%
!!! TATTAAAAAAGTTCTGAAAA+TGG + chr2_2:55796313-55796332 None:intergenic 15.0%
!! TAACAAATATATCATTCTAA+TGG + chr2_2:55797729-55797748 None:intergenic 15.0%
!!! GTAGTAATTACATTTTGTTT+TGG - chr2_2:55791819-55791838 Msa0259020:three_prime_UTR 20.0%
!! AATTCAATGTAATTACAAAG+TGG + chr2_2:55791977-55791996 None:intergenic 20.0%
!! TTAACATTAGATATGTAACA+TGG - chr2_2:55792263-55792282 Msa0259020:exon 20.0%
!! GAAAGTTGTATTATTGAAAT+AGG - chr2_2:55792415-55792434 Msa0259020:CDS 20.0%
!! TTAAGAAATGTCAGTTATTA+CGG - chr2_2:55792452-55792471 Msa0259020:CDS 20.0%
!!! TAATTTTCTTTTTTAGGTTC+AGG - chr2_2:55792576-55792595 Msa0259020:CDS 20.0%
!!! AATTTTCTTTTTTAGGTTCA+GGG - chr2_2:55792577-55792596 Msa0259020:CDS 20.0%
!! ATTTAAAAAGAACTAGTTGT+TGG + chr2_2:55792620-55792639 None:intergenic 20.0%
!! TTTAGGTAAAATGAGATATT+AGG + chr2_2:55792669-55792688 None:intergenic 20.0%
!! AATCAAAAACTTAGATGAAA+AGG + chr2_2:55793219-55793238 None:intergenic 20.0%
!!! GATTGTTTTACTTTTATTGT+AGG - chr2_2:55793235-55793254 Msa0259020:CDS 20.0%
!!! TTTTAAACAATCGAGTTTTT+GGG + chr2_2:55793361-55793380 None:intergenic 20.0%
!!! ATTTTAAACAATCGAGTTTT+TGG + chr2_2:55793362-55793381 None:intergenic 20.0%
!! CATTGATGAAAAAATCAAAT+GGG - chr2_2:55793421-55793440 Msa0259020:five_prime_UTR 20.0%
!! ATTGATGAAAAAATCAAATG+GGG - chr2_2:55793422-55793441 Msa0259020:five_prime_UTR 20.0%
!! GTAATTTCTGATATTTACAT+AGG - chr2_2:55793842-55793861 Msa0259020:intron 20.0%
!! AATTTCTGATATTTACATAG+GGG - chr2_2:55793844-55793863 Msa0259020:intron 20.0%
!! AAGTTATTATAAGGATTTCA+AGG + chr2_2:55794405-55794424 None:intergenic 20.0%
!! GAAAATATTTAGTTATAAGC+AGG + chr2_2:55794431-55794450 None:intergenic 20.0%
!! AGTAAAAATAAAGGAAAAAG+TGG + chr2_2:55794462-55794481 None:intergenic 20.0%
!!! ATTTTGCTTATAAATATGAC+CGG + chr2_2:55794704-55794723 None:intergenic 20.0%
!!! ATAAGCAAAATGTACTTTTT+AGG - chr2_2:55794713-55794732 Msa0259020:intron 20.0%
!! CATTGAATACATAATGTATT+TGG - chr2_2:55794738-55794757 Msa0259020:intron 20.0%
!! CATTCAATACTTAATGTATT+TGG + chr2_2:55794776-55794795 None:intergenic 20.0%
!! TTGTTGTAAATATTTGTAAC+AGG - chr2_2:55794974-55794993 Msa0259020:intron 20.0%
!! CGAAAATAAAAAAATTACCT+AGG + chr2_2:55795076-55795095 None:intergenic 20.0%
!!! AAATACCTTTTTATATGTTC+AGG - chr2_2:55795128-55795147 Msa0259020:intron 20.0%
!!! AATACCTTTTTATATGTTCA+GGG - chr2_2:55795129-55795148 Msa0259020:intron 20.0%
!!! AAGGTATTAATTTGCATAAA+TGG - chr2_2:55795374-55795393 Msa0259020:intron 20.0%
!!! TTCCTTTTTCTTGATAAAAA+TGG - chr2_2:55796459-55796478 Msa0259020:intron 20.0%
!!! TACCATTTTTATCAAGAAAA+AGG + chr2_2:55796464-55796483 None:intergenic 20.0%
!!! ATACATAAATGAAAGTTTTC+AGG + chr2_2:55797041-55797060 None:intergenic 20.0%
!!! ATTTTAGTAGATATATTCAC+AGG + chr2_2:55798714-55798733 None:intergenic 20.0%
!!! CTCAAATACTATTGATAATT+TGG - chr2_2:55799028-55799047 Msa0259020:intron 20.0%
!!! TATTTTTAATTTGTTGCGAT+TGG - chr2_2:55799616-55799635 Msa0259020:five_prime_UTR 20.0%
! ATGGTTTATTTATGGTTAGA+GGG + chr2_2:55791211-55791230 None:intergenic 25.0%
! AATGGTTTATTTATGGTTAG+AGG + chr2_2:55791212-55791231 None:intergenic 25.0%
! ACAGTGTACTAATTAATTAG+TGG + chr2_2:55791333-55791352 None:intergenic 25.0%
!! ATGATTAATTATGTTGGTTG+TGG + chr2_2:55791373-55791392 None:intergenic 25.0%
! GCAATGATGATTAATTATGT+TGG + chr2_2:55791379-55791398 None:intergenic 25.0%
!!! TGAATTTCAAAGCATTGTAA+CGG + chr2_2:55791503-55791522 None:intergenic 25.0%
! AAACAAACAAAAAACGCAAA+TGG + chr2_2:55791672-55791691 None:intergenic 25.0%
! GATATGTGTTGAAGAAAATT+AGG - chr2_2:55791751-55791770 Msa0259020:three_prime_UTR 25.0%
! TAATCTGTAAAAACCAAAGT+AGG + chr2_2:55792318-55792337 None:intergenic 25.0%
! TACTATGAAAGCTTAAACTT+AGG + chr2_2:55793021-55793040 None:intergenic 25.0%
!!! TTTTGATCGTTTTGAAATTG+AGG + chr2_2:55793076-55793095 None:intergenic 25.0%
!! TAATCTAGAAATAGTTTGCA+TGG - chr2_2:55793172-55793191 Msa0259020:CDS 25.0%
!! GCATTGATGAAAAAATCAAA+TGG - chr2_2:55793420-55793439 Msa0259020:five_prime_UTR 25.0%
! TTTATCCATGTAATACCTTT+AGG + chr2_2:55793629-55793648 None:intergenic 25.0%
! AAGTTTGACAAAATTTAACC+AGG + chr2_2:55793699-55793718 None:intergenic 25.0%
! CAGAAATTACGAACAAATTA+AGG + chr2_2:55793832-55793851 None:intergenic 25.0%
!! ATATTTACATAGGGGATTTT+GGG - chr2_2:55793852-55793871 Msa0259020:intron 25.0%
! ACATTCAATACTAAGGAAAA+TGG + chr2_2:55794019-55794038 None:intergenic 25.0%
! CATCAATACATTCAATACTA+AGG + chr2_2:55794026-55794045 None:intergenic 25.0%
! AGATTGAAAACATAATGACA+AGG + chr2_2:55794158-55794177 None:intergenic 25.0%
!! CTATAACATAGATACCATTT+TGG + chr2_2:55794283-55794302 None:intergenic 25.0%
!!! TATGTATTAGTCTTTTGTTC+AGG + chr2_2:55794381-55794400 None:intergenic 25.0%
! AATATTTAGTTATAAGCAGG+AGG + chr2_2:55794428-55794447 None:intergenic 25.0%
!! AGGTGTATGTTAGTTTAATA+AGG - chr2_2:55794565-55794584 Msa0259020:intron 25.0%
!! GGTGTATGTTAGTTTAATAA+GGG - chr2_2:55794566-55794585 Msa0259020:intron 25.0%
! TATAAACTGACACAAGTTAT+AGG + chr2_2:55794604-55794623 None:intergenic 25.0%
! GATTATATAGCTTAACAAGA+TGG + chr2_2:55794903-55794922 None:intergenic 25.0%
! AAATATTTGTAACAGGTTGT+AGG - chr2_2:55794981-55795000 Msa0259020:intron 25.0%
! ATATCAGATTTGAATCCATA+AGG + chr2_2:55795047-55795066 None:intergenic 25.0%
! ATGGATTCAAATCTGATATT+TGG - chr2_2:55795048-55795067 Msa0259020:intron 25.0%
! ATTCTCACTTGATACTTAAT+AGG - chr2_2:55795214-55795233 Msa0259020:intron 25.0%
! TAGTGCAATGAATGAATATA+TGG + chr2_2:55795277-55795296 None:intergenic 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr2_2:55795629-55795648 Msa0259020:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr2_2:55795633-55795652 Msa0259020:intron 25.0%
! ACCATAAAAATAATTCACCA+AGG + chr2_2:55795861-55795880 None:intergenic 25.0%
!!! ACTGAGTTCTAAATTTTTGT+TGG - chr2_2:55796222-55796241 Msa0259020:intron 25.0%
!!! AACTTTTTTAATAGAGTTGC+TGG - chr2_2:55796320-55796339 Msa0259020:intron 25.0%
! TGTATGGATATTTATGTATG+TGG - chr2_2:55796420-55796439 Msa0259020:intron 25.0%
!!! GATAAAAATGGTACTTTTTC+AGG - chr2_2:55796471-55796490 Msa0259020:intron 25.0%
! ACAGTAAACAAAATTTGAAG+TGG + chr2_2:55796757-55796776 None:intergenic 25.0%
! TTTACTGTAAGAAATGTCAT+TGG - chr2_2:55796769-55796788 Msa0259020:intron 25.0%
! CTTTCATTTATGTATTACAC+AGG - chr2_2:55797046-55797065 Msa0259020:intron 25.0%
! GAACAATATTGATGAACATA+AGG + chr2_2:55797104-55797123 None:intergenic 25.0%
! ATAGTTAAGAATGCAAAGAT+GGG - chr2_2:55797463-55797482 Msa0259020:intron 25.0%
!! TCTTTAACCTTTTCATGTTT+TGG + chr2_2:55797490-55797509 None:intergenic 25.0%
! AAATTTCCGAAATCAGATTT+CGG - chr2_2:55797589-55797608 Msa0259020:intron 25.0%
! AAATAAGTTTCAGTGTCATA+GGG + chr2_2:55797764-55797783 None:intergenic 25.0%
!! TTTTAATCACACTGAAATTG+TGG - chr2_2:55798255-55798274 Msa0259020:intron 25.0%
! TTTAATCACACTGAAATTGT+GGG - chr2_2:55798256-55798275 Msa0259020:intron 25.0%
! TTTCCTTACAAAAATCTTGA+AGG + chr2_2:55798503-55798522 None:intergenic 25.0%
!! TCAAGATTTTTGTAAGGAAA+TGG - chr2_2:55798503-55798522 Msa0259020:intron 25.0%
!! AAAGTTTTACAAGAAGAGAA+GGG - chr2_2:55798744-55798763 Msa0259020:intron 25.0%
! TGATTTAGAAATGAGAAATG+TGG - chr2_2:55798953-55798972 Msa0259020:intron 25.0%
! GATTTAGAAATGAGAAATGT+GGG - chr2_2:55798954-55798973 Msa0259020:intron 25.0%
! AGAGCAATTTGAAGATTTAA+GGG + chr2_2:55798991-55799010 None:intergenic 25.0%
! TGTTATATTTAGCGAAATCA+GGG + chr2_2:55799124-55799143 None:intergenic 25.0%
! TTGTTATATTTAGCGAAATC+AGG + chr2_2:55799125-55799144 None:intergenic 25.0%
! TAGTAAGGTTTCTTTATTCT+TGG - chr2_2:55799398-55799417 Msa0259020:five_prime_UTR 25.0%
!!! GTCTTTTCTTGTTTTGTTTT+TGG - chr2_2:55799445-55799464 Msa0259020:five_prime_UTR 25.0%
! TACTATTTACAGCATCATAA+AGG + chr2_2:55799560-55799579 None:intergenic 25.0%
! AATAAACACACACATGAATA+TGG - chr2_2:55799661-55799680 Msa0259020:five_prime_UTR 25.0%
AGAGGGAAATGGTTTATTTA+TGG + chr2_2:55791219-55791238 None:intergenic 30.0%
! AGAAATGAATGAACGTTTTG+TGG + chr2_2:55791433-55791452 None:intergenic 30.0%
ACGTTCATTCATTTCTCAAA+CGG - chr2_2:55791437-55791456 Msa0259020:three_prime_UTR 30.0%
ATTTGCAATGATGTCTAAGA+TGG - chr2_2:55791550-55791569 Msa0259020:three_prime_UTR 30.0%
CTTCTGATCAAATGTGTATT+TGG - chr2_2:55791868-55791887 Msa0259020:three_prime_UTR 30.0%
!! CATAGCTTGTTTATATGAAG+TGG - chr2_2:55792066-55792085 Msa0259020:three_prime_UTR 30.0%
TTGGGAATTGTATTTGTAGA+TGG - chr2_2:55792100-55792119 Msa0259020:three_prime_UTR 30.0%
TCCTTACATTGTTGAATTCA+AGG - chr2_2:55792145-55792164 Msa0259020:three_prime_UTR 30.0%
TCCTTGAATTCAACAATGTA+AGG + chr2_2:55792149-55792168 None:intergenic 30.0%
!!! GTGTATCTTTGTTTTCATAC+TGG - chr2_2:55792215-55792234 Msa0259020:three_prime_UTR 30.0%
!!! TTGTGAAGATGTTGACTTTT+TGG - chr2_2:55792239-55792258 Msa0259020:three_prime_UTR 30.0%
! AGATATGTAACATGGATTGT+AGG - chr2_2:55792271-55792290 Msa0259020:CDS 30.0%
! GATATGTAACATGGATTGTA+GGG - chr2_2:55792272-55792291 Msa0259020:CDS 30.0%
TTAGTATGTTTGACCTACTT+TGG - chr2_2:55792302-55792321 Msa0259020:CDS 30.0%
TAAAAAGAACTAGTTGTTGG+AGG + chr2_2:55792617-55792636 None:intergenic 30.0%
!! GAATAGTCAGCATTGTTTTT+AGG + chr2_2:55792686-55792705 None:intergenic 30.0%
AAACACAGAATATGAAACAG+AGG - chr2_2:55792791-55792810 Msa0259020:CDS 30.0%
GTATCAATCAAACTGAAGTT+TGG + chr2_2:55792843-55792862 None:intergenic 30.0%
AGTTTGATTGATACAACTGT+TGG - chr2_2:55792849-55792868 Msa0259020:CDS 30.0%
TAATCAAACTGAAGTTTGGA+TGG + chr2_2:55792956-55792975 None:intergenic 30.0%
CTCTTAATCAAACTGAAGTT+TGG + chr2_2:55792960-55792979 None:intergenic 30.0%
! TGGGCTCATAAAATTTTACA+TGG + chr2_2:55793342-55793361 None:intergenic 30.0%
ATAAACAAGAATACCTCTTC+AGG + chr2_2:55793456-55793475 None:intergenic 30.0%
GCAAAACAAAATTTGAATGC+AGG + chr2_2:55793599-55793618 None:intergenic 30.0%
ACATGGATAAAGAAACTTCA+TGG - chr2_2:55793638-55793657 Msa0259020:five_prime_UTR 30.0%
TTCTAACATCTTTCTTACCA+AGG - chr2_2:55793730-55793749 Msa0259020:five_prime_UTR 30.0%
! GATATTTACATAGGGGATTT+TGG - chr2_2:55793851-55793870 Msa0259020:intron 30.0%
!! TCTAAAAGGTGTTAGCAATT+AGG + chr2_2:55794052-55794071 None:intergenic 30.0%
! AGCAGAGTTATGATGATTTT+AGG - chr2_2:55794084-55794103 Msa0259020:intron 30.0%
! GCAGAGTTATGATGATTTTA+GGG - chr2_2:55794085-55794104 Msa0259020:intron 30.0%
AAGGTGAGAGAGAAAAAAAT+GGG + chr2_2:55794139-55794158 None:intergenic 30.0%
! TTTTCAATCTTCACATTGTC+CGG - chr2_2:55794168-55794187 Msa0259020:intron 30.0%
TAGCAATAAAATGAGCAACA+AGG + chr2_2:55794212-55794231 None:intergenic 30.0%
TACTGTTCTGCTATTAAATC+TGG - chr2_2:55794230-55794249 Msa0259020:intron 30.0%
CATCTCATATTAGACCAAAA+TGG - chr2_2:55794266-55794285 Msa0259020:intron 30.0%
CCTTCAATACATAACTTAGA+CGG + chr2_2:55794544-55794563 None:intergenic 30.0%
CTAAGTTATGTATTGAAGGT+AGG - chr2_2:55794545-55794564 Msa0259020:intron 30.0%
! GTATGTTAGTTTAATAAGGG+CGG - chr2_2:55794569-55794588 Msa0259020:intron 30.0%
TTCGATCCTTACAAAATACT+GGG + chr2_2:55794830-55794849 None:intergenic 30.0%
ATTCGATCCTTACAAAATAC+TGG + chr2_2:55794831-55794850 None:intergenic 30.0%
AGCTCGGAATTATTAAAAGT+TGG + chr2_2:55794854-55794873 None:intergenic 30.0%
ATTATCAACTTCAAGTAGCT+CGG + chr2_2:55794870-55794889 None:intergenic 30.0%
AACACCCTGAACATATAAAA+AGG + chr2_2:55795136-55795155 None:intergenic 30.0%
!! TTACAAAAGCTTTGAAAGCA+GGG + chr2_2:55795184-55795203 None:intergenic 30.0%
TAAGTATCAAGTGAGAATAG+AGG + chr2_2:55795212-55795231 None:intergenic 30.0%
ATTTGCATAAATGGTCAAGA+AGG - chr2_2:55795383-55795402 Msa0259020:intron 30.0%
TGGAAGAAATAGAGGAAAAA+GGG - chr2_2:55795548-55795567 Msa0259020:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr2_2:55795626-55795645 Msa0259020:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr2_2:55795632-55795651 Msa0259020:intron 30.0%
!!! GCCTTGGTGAATTATTTTTA+TGG - chr2_2:55795857-55795876 Msa0259020:intron 30.0%
!! TCACTTTCAGATTTAACTTG+AGG + chr2_2:55795958-55795977 None:intergenic 30.0%
TGAAAGTGATATCTCATTTC+AGG - chr2_2:55795969-55795988 Msa0259020:intron 30.0%
ATGGTATCTGTTTGTGTAAA+TGG - chr2_2:55796035-55796054 Msa0259020:intron 30.0%
TGTTTGTGTAAATGGTCTAA+AGG - chr2_2:55796043-55796062 Msa0259020:intron 30.0%
TGCAAAATACTGCATTAATC+TGG + chr2_2:55796112-55796131 None:intergenic 30.0%
!! CTTGGTATAATTTTGAAAGC+TGG + chr2_2:55796141-55796160 None:intergenic 30.0%
! AACTTAACTGCTGTTTGTTA+AGG - chr2_2:55796256-55796275 Msa0259020:intron 30.0%
! ACTTAACTGCTGTTTGTTAA+GGG - chr2_2:55796257-55796276 Msa0259020:intron 30.0%
! AACTTTCATCATGTACTGAT+GGG + chr2_2:55796380-55796399 None:intergenic 30.0%
AAACTTTCATCATGTACTGA+TGG + chr2_2:55796381-55796400 None:intergenic 30.0%
TGATTCTCTACTCTATTGTA+TGG - chr2_2:55796404-55796423 Msa0259020:intron 30.0%
ATGGATATTTATGTATGTGG+AGG - chr2_2:55796423-55796442 Msa0259020:intron 30.0%
!!! AATGGTACTTTTTCAGGATT+TGG - chr2_2:55796477-55796496 Msa0259020:intron 30.0%
AAAGTAGAAACTTACAAGGA+TGG + chr2_2:55796562-55796581 None:intergenic 30.0%
CGAAAAAGTAGAAACTTACA+AGG + chr2_2:55796566-55796585 None:intergenic 30.0%
!! CACATGATGTTGATAACTAT+CGG - chr2_2:55796814-55796833 Msa0259020:intron 30.0%
TACTTTAAATCCATACACAC+AGG - chr2_2:55796901-55796920 Msa0259020:intron 30.0%
!! TTTTCAGGATATGTACTGAT+GGG + chr2_2:55797026-55797045 None:intergenic 30.0%
!! ATAAGGGTGCTTTAAGATAT+CGG + chr2_2:55797075-55797094 None:intergenic 30.0%
AATAGTTCGTGTAGTGAAAA+AGG - chr2_2:55797215-55797234 Msa0259020:intron 30.0%
!! TAGAGCTATTTCTTTCTCTA+CGG + chr2_2:55797354-55797373 None:intergenic 30.0%
CAACATTAGATTTGTGTTCA+AGG + chr2_2:55797426-55797445 None:intergenic 30.0%
CTTGAACACAAATCTAATGT+TGG - chr2_2:55797424-55797443 Msa0259020:five_prime_UTR 30.0%
GATAGTTAAGAATGCAAAGA+TGG - chr2_2:55797462-55797481 Msa0259020:intron 30.0%
TGATTTCGGAAATTTACACA+AGG + chr2_2:55797584-55797603 None:intergenic 30.0%
TTAACACCGAAATCTGATTT+CGG + chr2_2:55797598-55797617 None:intergenic 30.0%
!! AAATCAGATTTCGGTGTTAA+TGG - chr2_2:55797598-55797617 Msa0259020:intron 30.0%
ATCACATACTTCAAAACATC+AGG - chr2_2:55797696-55797715 Msa0259020:intron 30.0%
GAAATAAGTTTCAGTGTCAT+AGG + chr2_2:55797765-55797784 None:intergenic 30.0%
!!! TTATGTCGAGGTTTAGTTTT+TGG + chr2_2:55797833-55797852 None:intergenic 30.0%
AAAAACTAAACCTCGACATA+AGG - chr2_2:55797832-55797851 Msa0259020:intron 30.0%
! TCTTTATCATTTGCTGCATT+TGG + chr2_2:55797995-55798014 None:intergenic 30.0%
ATGCAGCAAATGATAAAGAA+AGG - chr2_2:55797996-55798015 Msa0259020:intron 30.0%
AGATACAAATAAAATAGCCC+AGG - chr2_2:55798021-55798040 Msa0259020:intron 30.0%
!! TTCTGAAAAGTTGGTGTAAA+CGG + chr2_2:55798334-55798353 None:intergenic 30.0%
! GTTATGGTATTCTGAAAAGT+TGG + chr2_2:55798343-55798362 None:intergenic 30.0%
TACTTTCTCATTACGAGTTA+TGG + chr2_2:55798359-55798378 None:intergenic 30.0%
! TTTGATTTCTTGTGTGACTT+TGG + chr2_2:55798478-55798497 None:intergenic 30.0%
! AGACCTTCAAGATTTTTGTA+AGG - chr2_2:55798497-55798516 Msa0259020:intron 30.0%
AAACATTCACTTTCCATTTC+TGG - chr2_2:55798543-55798562 Msa0259020:intron 30.0%
!!! AACTGACTTTTTTCCAGAAA+TGG + chr2_2:55798559-55798578 None:intergenic 30.0%
ACTTTATGAGGCCTATTATT+TGG + chr2_2:55798606-55798625 None:intergenic 30.0%
TCTCTTCTTGTAAAACTTTC+TGG + chr2_2:55798743-55798762 None:intergenic 30.0%
! GAAAGTTTTACAAGAAGAGA+AGG - chr2_2:55798743-55798762 Msa0259020:intron 30.0%
TTTGAAGATTTAAGGGACAA+AGG + chr2_2:55798984-55799003 None:intergenic 30.0%
CAGAGCAATTTGAAGATTTA+AGG + chr2_2:55798992-55799011 None:intergenic 30.0%
AAGGTTTCTTTATTCTTGGT+TGG - chr2_2:55799402-55799421 Msa0259020:five_prime_UTR 30.0%
GTTTGTTCTCTTAATTCAAG+TGG + chr2_2:55799489-55799508 None:intergenic 30.0%
CTTGAATTAAGAGAACAAAC+AGG - chr2_2:55799489-55799508 Msa0259020:five_prime_UTR 30.0%
GTTTATTTATGGTTAGAGGG+AGG + chr2_2:55791208-55791227 None:intergenic 35.0%
TGAAGAGAGAGAAAGTAAGA+GGG + chr2_2:55791236-55791255 None:intergenic 35.0%
ATGAAGAGAGAGAAAGTAAG+AGG + chr2_2:55791237-55791256 None:intergenic 35.0%
TCAAGAAGAAGAAGAAGAAG+TGG + chr2_2:55791274-55791293 None:intergenic 35.0%
!! TGGAGTAATTGCGTTGATTA+CGG + chr2_2:55791313-55791332 None:intergenic 35.0%
TGCAATTCTCGTTAATCACA+AGG - chr2_2:55791619-55791638 Msa0259020:three_prime_UTR 35.0%
AATTCTCGTTAATCACAAGG+TGG - chr2_2:55791622-55791641 Msa0259020:three_prime_UTR 35.0%
TGAAGAAAATTAGGCTTGCA+AGG - chr2_2:55791760-55791779 Msa0259020:three_prime_UTR 35.0%
TATCAGATATTGACACGTGT+CGG + chr2_2:55791897-55791916 None:intergenic 35.0%
!! TGAAGTGGTGTAGTTGATTT+TGG - chr2_2:55792081-55792100 Msa0259020:three_prime_UTR 35.0%
!! GAAGTGGTGTAGTTGATTTT+GGG - chr2_2:55792082-55792101 Msa0259020:three_prime_UTR 35.0%
TTGTTGAATTCAAGGAAGCT+TGG - chr2_2:55792153-55792172 Msa0259020:three_prime_UTR 35.0%
TGTTGAATTCAAGGAAGCTT+GGG - chr2_2:55792154-55792173 Msa0259020:three_prime_UTR 35.0%
!!! TGATCGTTTTGAAATTGAGG+TGG + chr2_2:55793073-55793092 None:intergenic 35.0%
TGCTATGTTTGCATTGTTAC+TGG - chr2_2:55793260-55793279 Msa0259020:CDS 35.0%
ATTGTTACTGGATACTGTGA+AGG - chr2_2:55793272-55793291 Msa0259020:CDS 35.0%
GGATAATACCTGTACTAACT+CGG - chr2_2:55793314-55793333 Msa0259020:CDS 35.0%
! ATGGGTTACTCAATTACTGT+TGG - chr2_2:55793563-55793582 Msa0259020:five_prime_UTR 35.0%
CATGTAATACCTTTAGGTCA+CGG + chr2_2:55793623-55793642 None:intergenic 35.0%
ATTCCACTTAAGAATGTACC+TGG - chr2_2:55793678-55793697 Msa0259020:five_prime_UTR 35.0%
TAACCAGGTACATTCTTAAG+TGG + chr2_2:55793684-55793703 None:intergenic 35.0%
! AGCAGACGATTTAACTTCTT+CGG - chr2_2:55793892-55793911 Msa0259020:five_prime_UTR 35.0%
TTGCTTCTTCTATGAATCCA+AGG - chr2_2:55793971-55793990 Msa0259020:intron 35.0%
TGCTTCTTCTATGAATCCAA+GGG - chr2_2:55793972-55793991 Msa0259020:intron 35.0%
!! ACAAATTTAGCTTGAACCCT+TGG + chr2_2:55793991-55794010 None:intergenic 35.0%
AGGTGAGAGAGAAAAAAATG+GGG + chr2_2:55794138-55794157 None:intergenic 35.0%
CAAGGTGAGAGAGAAAAAAA+TGG + chr2_2:55794140-55794159 None:intergenic 35.0%
AGCAGGAGGAAGTTATTATA+AGG + chr2_2:55794414-55794433 None:intergenic 35.0%
CCGTCTAAGTTATGTATTGA+AGG - chr2_2:55794541-55794560 Msa0259020:intron 35.0%
TGCTTATAAATATGACCGGA+GGG + chr2_2:55794700-55794719 None:intergenic 35.0%
TTGCTTATAAATATGACCGG+AGG + chr2_2:55794701-55794720 None:intergenic 35.0%
! ATGTGACCCAGTATTTTGTA+AGG - chr2_2:55794821-55794840 Msa0259020:intron 35.0%
ATTGCATACAGTACAATCAC+TGG - chr2_2:55794935-55794954 Msa0259020:intron 35.0%
GAATATCTGTAAGCAGTTCA+GGG + chr2_2:55795025-55795044 None:intergenic 35.0%
CTGCTTACAGATATTCCTTA+TGG - chr2_2:55795029-55795048 Msa0259020:intron 35.0%
AAATCTGATATTTGGTCCCT+AGG - chr2_2:55795056-55795075 Msa0259020:intron 35.0%
TTTCGACGACTATCTGATAT+TGG - chr2_2:55795091-55795110 Msa0259020:intron 35.0%
!! AGGGTGTTGTATATATGAGA+TGG - chr2_2:55795148-55795167 Msa0259020:intron 35.0%
!! CTTACAAAAGCTTTGAAAGC+AGG + chr2_2:55795185-55795204 None:intergenic 35.0%
GTGGAAGAAATAGAGGAAAA+AGG - chr2_2:55795547-55795566 Msa0259020:intron 35.0%
AAGAAATAGAGGAAAAAGGG+AGG - chr2_2:55795551-55795570 Msa0259020:intron 35.0%
AGAAATAGAGGAAAAAGGGA+GGG - chr2_2:55795552-55795571 Msa0259020:intron 35.0%
AATACAAAACCCTCCTCATT+TGG - chr2_2:55795604-55795623 Msa0259020:intron 35.0%
ATACAAAACCCTCCTCATTT+GGG - chr2_2:55795605-55795624 Msa0259020:intron 35.0%
!!! TTTTTTAGTTCCCCCAAATG+AGG + chr2_2:55795620-55795639 None:intergenic 35.0%
!! AATTCACCAAGGCTTTGTTT+GGG + chr2_2:55795850-55795869 None:intergenic 35.0%
!! TAATTCACCAAGGCTTTGTT+TGG + chr2_2:55795851-55795870 None:intergenic 35.0%
TTTGTCCAGCAAAAAAGACA+TGG - chr2_2:55796016-55796035 Msa0259020:intron 35.0%
!!! AGATACCATGTCTTTTTTGC+TGG + chr2_2:55796024-55796043 None:intergenic 35.0%
CCAAAAAATAGGTCAGAATG+AGG + chr2_2:55796181-55796200 None:intergenic 35.0%
!!! CCTCATTCTGACCTATTTTT+TGG - chr2_2:55796178-55796197 Msa0259020:intron 35.0%
CAGAAAAGCAGCCAAAAAAT+AGG + chr2_2:55796192-55796211 None:intergenic 35.0%
ATGGAAGCAAACTCAATGTT+AGG + chr2_2:55796294-55796313 None:intergenic 35.0%
!! TATGTGGAGGTATCTTATCA+TGG - chr2_2:55796436-55796455 Msa0259020:intron 35.0%
!!! GTACTTTTTCAGGATTTGGA+TGG - chr2_2:55796481-55796500 Msa0259020:intron 35.0%
TACAAGGATGGAGAATAACA+GGG + chr2_2:55796550-55796569 None:intergenic 35.0%
TTACAAGGATGGAGAATAAC+AGG + chr2_2:55796551-55796570 None:intergenic 35.0%
! CATACCTATTTGACTTCAAC+GGG + chr2_2:55796649-55796668 None:intergenic 35.0%
! CCATACCTATTTGACTTCAA+CGG + chr2_2:55796650-55796669 None:intergenic 35.0%
! TAAGAAATGTCATTGGTGTC+CGG - chr2_2:55796776-55796795 Msa0259020:intron 35.0%
CACAGGAAAACACTGATAAA+AGG - chr2_2:55796918-55796937 Msa0259020:intron 35.0%
!! GTTTTCAGGATATGTACTGA+TGG + chr2_2:55797027-55797046 None:intergenic 35.0%
GAACATAAGGCTGCAAATAA+GGG + chr2_2:55797091-55797110 None:intergenic 35.0%
TGAACATAAGGCTGCAAATA+AGG + chr2_2:55797092-55797111 None:intergenic 35.0%
!!! ACAGCAAAAATTGGCTTTTC+AGG + chr2_2:55797155-55797174 None:intergenic 35.0%
GGAACATGAACAGCAAAAAT+TGG + chr2_2:55797164-55797183 None:intergenic 35.0%
!!! ACTTTTTTCACTTTCTGCCA+TGG + chr2_2:55797195-55797214 None:intergenic 35.0%
!! AGAGCTATTTCTTTCTCTAC+GGG + chr2_2:55797353-55797372 None:intergenic 35.0%
CAATGCCAAAACAGATAAAC+AGG - chr2_2:55797381-55797400 Msa0259020:intron 35.0%
! AACCTCCTGTTTATCTGTTT+TGG + chr2_2:55797389-55797408 None:intergenic 35.0%
AAACAGATAAACAGGAGGTT+AGG - chr2_2:55797389-55797408 Msa0259020:intron 35.0%
! GATTCGTTTTGCAGAATGAA+GGG + chr2_2:55797671-55797690 None:intergenic 35.0%
! TTTGGTGTAGGTTCTATCAT+CGG + chr2_2:55797815-55797834 None:intergenic 35.0%
TCTGCTACTACTTGTTTGAT+AGG + chr2_2:55797875-55797894 None:intergenic 35.0%
TACAAATAAAATAGCCCAGG+AGG - chr2_2:55798024-55798043 Msa0259020:intron 35.0%
CTACTTTCAAAAGCCTTCAA+AGG + chr2_2:55798106-55798125 None:intergenic 35.0%
!! GCTTTTGAAAGTAGTACCAA+AGG - chr2_2:55798112-55798131 Msa0259020:intron 35.0%
AGATGAAACAGAATTGTTGC+TGG + chr2_2:55798149-55798168 None:intergenic 35.0%
ATTAAAACTCCCATGTTCAG+GGG + chr2_2:55798242-55798261 None:intergenic 35.0%
GATTAAAACTCCCATGTTCA+GGG + chr2_2:55798243-55798262 None:intergenic 35.0%
TGATTAAAACTCCCATGTTC+AGG + chr2_2:55798244-55798263 None:intergenic 35.0%
GGACCTGATGAAAATATTTC+TGG - chr2_2:55798298-55798317 Msa0259020:intron 35.0%
! TCGCCAGAAATATTTTCATC+AGG + chr2_2:55798304-55798323 None:intergenic 35.0%
CAAACAACTACATCTGATTC+CGG - chr2_2:55798433-55798452 Msa0259020:intron 35.0%
CTATTATTTGGCAAGCTTAC+TGG + chr2_2:55798594-55798613 None:intergenic 35.0%
CAGTAAGCTTGCCAAATAAT+AGG - chr2_2:55798592-55798611 Msa0259020:intron 35.0%
! AACTGGTGATGACAAATTCA+TGG - chr2_2:55798653-55798672 Msa0259020:intron 35.0%
TGATGACAAATTCATGGTGA+GGG - chr2_2:55798659-55798678 Msa0259020:intron 35.0%
TTTACAAGAAGAGAAGGGAA+TGG - chr2_2:55798749-55798768 Msa0259020:intron 35.0%
! TTCTCAGTTGATTCCATTAC+TGG + chr2_2:55798885-55798904 None:intergenic 35.0%
! AGTAATGGAATCAACTGAGA+AGG - chr2_2:55798884-55798903 Msa0259020:intron 35.0%
! GTAATGGAATCAACTGAGAA+GGG - chr2_2:55798885-55798904 Msa0259020:intron 35.0%
TACACTCATCAACGTTGTAA+AGG - chr2_2:55798929-55798948 Msa0259020:intron 35.0%
! TCAAGTATTTCTGAACATCC+TGG - chr2_2:55799074-55799093 Msa0259020:five_prime_UTR 35.0%
AATGCCAGAAAAGGAATCAT+TGG - chr2_2:55799172-55799191 Msa0259020:intron 35.0%
! ACATCCAATGATTCCTTTTC+TGG + chr2_2:55799179-55799198 None:intergenic 35.0%
TAAATCTTCCAAACAGAGAG+CGG - chr2_2:55799199-55799218 Msa0259020:intron 35.0%
TTTGCTGCAGCAAAATAGAT+TGG - chr2_2:55799256-55799275 Msa0259020:five_prime_UTR 35.0%
! CATCAATCCTTTTAGACTCT+TGG + chr2_2:55799354-55799373 None:intergenic 35.0%
CAAGAGTCTAAAAGGATTGA+TGG - chr2_2:55799352-55799371 Msa0259020:five_prime_UTR 35.0%
! TCTAAAAGGATTGATGGTTG+AGG - chr2_2:55799358-55799377 Msa0259020:five_prime_UTR 35.0%
! ATTGATGGTTGAGGAAAGTA+GGG - chr2_2:55799367-55799386 Msa0259020:five_prime_UTR 35.0%
TTGAGTATGTGTTAGCCATT+AGG + chr2_2:55799642-55799661 None:intergenic 35.0%
GAGAGAAAGTAAGAGGGAAA+TGG + chr2_2:55791230-55791249 None:intergenic 40.0%
GATGGATCAGTATGAGATCA+TGG - chr2_2:55791568-55791587 Msa0259020:three_prime_UTR 40.0%
TATGAGATCATGGAGCAGAT+CGG - chr2_2:55791578-55791597 Msa0259020:three_prime_UTR 40.0%
ATCACAAGGTGGAGAAGAAA+CGG - chr2_2:55791633-55791652 Msa0259020:three_prime_UTR 40.0%
AATTAGGCTTGCAAGGCAAA+CGG - chr2_2:55791767-55791786 Msa0259020:three_prime_UTR 40.0%
TAGAAGATCTGCTCATCAAG+AGG - chr2_2:55791797-55791816 Msa0259020:three_prime_UTR 40.0%
CATTAGTCAGTGATGTGTCT+GGG - chr2_2:55791946-55791965 Msa0259020:three_prime_UTR 40.0%
GTGACTGTCTCTTTAGTGAT+AGG - chr2_2:55792032-55792051 Msa0259020:three_prime_UTR 40.0%
TTGCTCAGAAACTCTGCAAA+TGG - chr2_2:55793544-55793563 Msa0259020:five_prime_UTR 40.0%
TGCTCAGAAACTCTGCAAAT+GGG - chr2_2:55793545-55793564 Msa0259020:five_prime_UTR 40.0%
!! CGTGACCTAAAGGTATTACA+TGG - chr2_2:55793621-55793640 Msa0259020:five_prime_UTR 40.0%
TAAGCGAACATCATGATCCT+TGG + chr2_2:55793750-55793769 None:intergenic 40.0%
AAGGATCATGATGTTCGCTT+AGG - chr2_2:55793749-55793768 Msa0259020:five_prime_UTR 40.0%
TTCTTCGGTACGTGTGAAAT+TGG - chr2_2:55793907-55793926 Msa0259020:five_prime_UTR 40.0%
TCTTCGGTACGTGTGAAATT+GGG - chr2_2:55793908-55793927 Msa0259020:five_prime_UTR 40.0%
CTTCAGCTCTTCTCTCTAAA+AGG + chr2_2:55794066-55794085 None:intergenic 40.0%
AGTTTAATAAGGGCGGTGTT+TGG - chr2_2:55794576-55794595 Msa0259020:intron 40.0%
ATTATTGCTCATACTCCCTC+CGG - chr2_2:55794682-55794701 Msa0259020:intron 40.0%
! TACAGTACAATCACTGGTTG+TGG - chr2_2:55794941-55794960 Msa0259020:intron 40.0%
AGTTCAGGGCACATATAGTT+GGG + chr2_2:55795011-55795030 None:intergenic 40.0%
GGAATATCTGTAAGCAGTTC+AGG + chr2_2:55795026-55795045 None:intergenic 40.0%
GCATTTCGATGCAACAGAAA+AGG - chr2_2:55795350-55795369 Msa0259020:intron 40.0%
TCGATGCAACAGAAAAGGTA+AGG - chr2_2:55795355-55795374 Msa0259020:intron 40.0%
!! TTAGGCTTTGTTTGCGAGTT+TGG - chr2_2:55795482-55795501 Msa0259020:intron 40.0%
GGAAAAAAGGAATGAGCAAG+TGG - chr2_2:55795528-55795547 Msa0259020:intron 40.0%
TGAGCAAGTGGAAGAAATAG+AGG - chr2_2:55795540-55795559 Msa0259020:intron 40.0%
GAAATAGAGGAAAAAGGGAG+GGG - chr2_2:55795553-55795572 Msa0259020:intron 40.0%
TACAAAACCCTCCTCATTTG+GGG - chr2_2:55795606-55795625 Msa0259020:intron 40.0%
ATTGTATTGGAGGAGGGATT+TGG - chr2_2:55795639-55795658 Msa0259020:intron 40.0%
TTGTATTGGAGGAGGGATTT+GGG - chr2_2:55795640-55795659 Msa0259020:intron 40.0%
! GGATAAGACTTGGTTGTTCT+TGG - chr2_2:55795926-55795945 Msa0259020:intron 40.0%
! TAACTGCTGTTTGTTAAGGG+TGG - chr2_2:55796260-55796279 Msa0259020:intron 40.0%
! AACTGCTGTTTGTTAAGGGT+GGG - chr2_2:55796261-55796280 Msa0259020:intron 40.0%
! AGTTGCTGGTGATTTTCAGT+TGG - chr2_2:55796334-55796353 Msa0259020:intron 40.0%
AAGATCAACCGTTCCTCTAT+TGG - chr2_2:55796514-55796533 Msa0259020:intron 40.0%
! GCAAAGTACCAATAGAGGAA+CGG + chr2_2:55796525-55796544 None:intergenic 40.0%
ACTACCCGTTGAAGTCAAAT+AGG - chr2_2:55796642-55796661 Msa0259020:intron 40.0%
CCGTTGAAGTCAAATAGGTA+TGG - chr2_2:55796647-55796666 Msa0259020:intron 40.0%
GTTTGTGTGGGTGAACTTTA+CGG - chr2_2:55796705-55796724 Msa0259020:intron 40.0%
!! TGTGCATTGATGATGCTTAC+CGG + chr2_2:55796798-55796817 None:intergenic 40.0%
CTTTGTGCATGTATGTGTAC+TGG - chr2_2:55796872-55796891 Msa0259020:intron 40.0%
! TCAGTGTTTTCCTGTGTGTA+TGG + chr2_2:55796914-55796933 None:intergenic 40.0%
! CACTGATAAAAGGCATGTTG+AGG - chr2_2:55796928-55796947 Msa0259020:intron 40.0%
! CTTTGAGAGAGACTTACTGT+TGG + chr2_2:55796972-55796991 None:intergenic 40.0%
!!! AATTGGCTTTTCAGGAGAAG+AGG + chr2_2:55797147-55797166 None:intergenic 40.0%
TCATGTTCCTCGAAAAACCA+TGG - chr2_2:55797175-55797194 Msa0259020:intron 40.0%
AGTTCGTGTAGTGAAAAAGG+TGG - chr2_2:55797218-55797237 Msa0259020:intron 40.0%
GTTTCAAAAGCAGCACCAAA+GGG - chr2_2:55797263-55797282 Msa0259020:five_prime_UTR 40.0%
! GTGATTTTGTCATCACCCTT+TGG + chr2_2:55797281-55797300 None:intergenic 40.0%
! TTTTCTCACCAATCGATGAC+AGG + chr2_2:55797313-55797332 None:intergenic 40.0%
TGCCAAAACAGATAAACAGG+AGG - chr2_2:55797384-55797403 Msa0259020:intron 40.0%
ATGTTGGATCTAAGCAAGCA+AGG - chr2_2:55797440-55797459 Msa0259020:intron 40.0%
GATGGGACCAAAACATGAAA+AGG - chr2_2:55797480-55797499 Msa0259020:intron 40.0%
AGATGAGTTCTCCAATGAGA+GGG - chr2_2:55797509-55797528 Msa0259020:intron 40.0%
! TGGTTTGAAGCCTAATGTAG+AGG - chr2_2:55797618-55797637 Msa0259020:intron 40.0%
AAAGTTGGCACCTCTACATT+AGG + chr2_2:55797631-55797650 None:intergenic 40.0%
!!! GCTTTTGAAGGTGCTAAAGT+TGG + chr2_2:55797646-55797665 None:intergenic 40.0%
!!! GAATGAAGGGTTGCTTTTGA+AGG + chr2_2:55797658-55797677 None:intergenic 40.0%
! GGATTCGTTTTGCAGAATGA+AGG + chr2_2:55797672-55797691 None:intergenic 40.0%
TCATTCTGCAAAACGAATCC+AGG - chr2_2:55797672-55797691 Msa0259020:intron 40.0%
CATTCTGCAAAACGAATCCA+GGG - chr2_2:55797673-55797692 Msa0259020:intron 40.0%
!!! GTTTTGAAGTATGTGATCCC+TGG + chr2_2:55797693-55797712 None:intergenic 40.0%
ATCATCGGTAACTGCTATCA+TGG + chr2_2:55797800-55797819 None:intergenic 40.0%
!!! CGAGGTTTAGTTTTTGGTGT+AGG + chr2_2:55797827-55797846 None:intergenic 40.0%
ACTTGTTTGATAGGACCACA+TGG + chr2_2:55797866-55797885 None:intergenic 40.0%
!! CTTGGAGGAGTCTTTTGTTT+TGG + chr2_2:55797917-55797936 None:intergenic 40.0%
TTATTGCGTCCCAGAAATGA+GGG + chr2_2:55797953-55797972 None:intergenic 40.0%
AGGCTAAGATGAGACATCAT+CGG - chr2_2:55798044-55798063 Msa0259020:intron 40.0%
! AAAGGCTCTCTAGAAACATG+TGG + chr2_2:55798088-55798107 None:intergenic 40.0%
!! TGTTTCTAGAGAGCCTTTGA+AGG - chr2_2:55798090-55798109 Msa0259020:intron 40.0%
TCATCTTCAGTCTCTGTTCA+AGG - chr2_2:55798163-55798182 Msa0259020:intron 40.0%
TTAAAACTCCCATGTTCAGG+GGG + chr2_2:55798241-55798260 None:intergenic 40.0%
!! AAAAGTTGGTGTAAACGGAG+AGG + chr2_2:55798329-55798348 None:intergenic 40.0%
GTAATGAGAAAGTAAGTCCC+AGG - chr2_2:55798365-55798384 Msa0259020:intron 40.0%
TTTGGCAGGCTAACTTTATG+AGG + chr2_2:55798618-55798637 None:intergenic 40.0%
GTTGAGATGCACATAAGCTT+TGG + chr2_2:55798636-55798655 None:intergenic 40.0%
AAGCTTATGTGCATCTCAAC+TGG - chr2_2:55798636-55798655 Msa0259020:intron 40.0%
GTGATGACAAATTCATGGTG+AGG - chr2_2:55798658-55798677 Msa0259020:intron 40.0%
AACTGCTATGGCGTATAACA+TGG + chr2_2:55798842-55798861 None:intergenic 40.0%
TTATACGCCATAGCAGTTAC+CGG - chr2_2:55798844-55798863 Msa0259020:intron 40.0%
GGAGTTACAAACGTAGATGT+TGG - chr2_2:55798906-55798925 Msa0259020:intron 40.0%
TGAAGAGGAAATGCCAGAAA+AGG - chr2_2:55799163-55799182 Msa0259020:intron 40.0%
! GAGACCTTACCTTTTCCAAA+GGG + chr2_2:55799305-55799324 None:intergenic 40.0%
AAAAGGTAAGGTCTCCTCAA+GGG - chr2_2:55799310-55799329 Msa0259020:five_prime_UTR 40.0%
! GATTGATGGTTGAGGAAAGT+AGG - chr2_2:55799366-55799385 Msa0259020:five_prime_UTR 40.0%
! TTGATGGTTGAGGAAAGTAG+GGG - chr2_2:55799368-55799387 Msa0259020:five_prime_UTR 40.0%
!! ATTTGTTGCGATTGGCCTAA+TGG - chr2_2:55799624-55799643 Msa0259020:five_prime_UTR 40.0%
GCATTAGTCAGTGATGTGTC+TGG - chr2_2:55791945-55791964 Msa0259020:three_prime_UTR 45.0%
GTTACTGGATACTGTGAAGG+TGG - chr2_2:55793275-55793294 Msa0259020:CDS 45.0%
ACATGGAACCGAGTTAGTAC+AGG + chr2_2:55793325-55793344 None:intergenic 45.0%
! TGTTTTGCACCGTGACCTAA+AGG - chr2_2:55793611-55793630 Msa0259020:five_prime_UTR 45.0%
GTGTGCAGGAACATTTCATC+CGG + chr2_2:55794190-55794209 None:intergenic 45.0%
AAATGAGCAACAAGGTGTGC+AGG + chr2_2:55794204-55794223 None:intergenic 45.0%
CAGTTCAGGGCACATATAGT+TGG + chr2_2:55795012-55795031 None:intergenic 45.0%
!! CAAAAGCTTTGAAAGCAGGG+CGG + chr2_2:55795181-55795200 None:intergenic 45.0%
ACAAAACCCTCCTCATTTGG+GGG - chr2_2:55795607-55795626 Msa0259020:intron 45.0%
TTAGTTCCCCCAAATGAGGA+GGG + chr2_2:55795616-55795635 None:intergenic 45.0%
! TTTAGTTCCCCCAAATGAGG+AGG + chr2_2:55795617-55795636 None:intergenic 45.0%
TGTATTGGAGGAGGGATTTG+GGG - chr2_2:55795641-55795660 Msa0259020:intron 45.0%
!! AGGCTTTGAGGGCTGAAAAA+TGG + chr2_2:55795809-55795828 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr2_2:55795838-55795857 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr2_2:55795839-55795858 None:intergenic 45.0%
!! CAAGGCTTTGTTTGGGAGTT+TGG + chr2_2:55795843-55795862 None:intergenic 45.0%
CAAACTCCCAAACAAAGCCT+TGG - chr2_2:55795841-55795860 Msa0259020:five_prime_UTR 45.0%
CTTATCCCACTAAGTGGAGT+CGG + chr2_2:55795913-55795932 None:intergenic 45.0%
! CCAAGTCTTATCCCACTAAG+TGG + chr2_2:55795919-55795938 None:intergenic 45.0%
CCACTTAGTGGGATAAGACT+TGG - chr2_2:55795916-55795935 Msa0259020:intron 45.0%
! ACTGCTGTTTGTTAAGGGTG+GGG - chr2_2:55796262-55796281 Msa0259020:intron 45.0%
AAGGATGGAGAATAACAGGG+AGG + chr2_2:55796547-55796566 None:intergenic 45.0%
ACTTACTGTTGGACGATGCT+CGG + chr2_2:55796961-55796980 None:intergenic 45.0%
!! TTTTCAGGAGAAGAGGCTGA+TGG + chr2_2:55797140-55797159 None:intergenic 45.0%
! CTTTCTGCCATGGTTTTTCG+AGG + chr2_2:55797185-55797204 None:intergenic 45.0%
CGTTTCAAAAGCAGCACCAA+AGG - chr2_2:55797262-55797281 Msa0259020:five_prime_UTR 45.0%
GGGTGATGACAAAATCACTG+AGG - chr2_2:55797283-55797302 Msa0259020:five_prime_UTR 45.0%
CTTTCTCTACGGGCATGATA+AGG + chr2_2:55797343-55797362 None:intergenic 45.0%
GAGATGAGTTCTCCAATGAG+AGG - chr2_2:55797508-55797527 Msa0259020:intron 45.0%
TTCATCAGACTCCCTCTCAT+TGG + chr2_2:55797523-55797542 None:intergenic 45.0%
AATGAGAGGGAGTCTGATGA+AGG - chr2_2:55797522-55797541 Msa0259020:intron 45.0%
TGTTTGATAGGACCACATGG+TGG + chr2_2:55797863-55797882 None:intergenic 45.0%
TTTGGCTGTGCAGAAACTTC+AGG + chr2_2:55797899-55797918 None:intergenic 45.0%
GAAATGAGGGTGGCTTAAGT+AGG + chr2_2:55797940-55797959 None:intergenic 45.0%
ACTTAAGCCACCCTCATTTC+TGG - chr2_2:55797940-55797959 Msa0259020:intron 45.0%
CTTAAGCCACCCTCATTTCT+GGG - chr2_2:55797941-55797960 Msa0259020:intron 45.0%
CTTATTGCGTCCCAGAAATG+AGG + chr2_2:55797954-55797973 None:intergenic 45.0%
TGCATTTGGCATATCATGCC+CGG + chr2_2:55797981-55798000 None:intergenic 45.0%
ATGTCTCATCTTAGCCTCCT+GGG + chr2_2:55798041-55798060 None:intergenic 45.0%
! AGACATCATCGGTTGCCTAA+CGG - chr2_2:55798055-55798074 Msa0259020:intron 45.0%
GCTGGTTGTTTGCATTCCTT+TGG + chr2_2:55798131-55798150 None:intergenic 45.0%
TTCATCAGGTCCACTACTGT+TGG + chr2_2:55798290-55798309 None:intergenic 45.0%
AGTAAGTCCCAGGTTAACTC+TGG - chr2_2:55798375-55798394 Msa0259020:intron 45.0%
GAGTGATCCAGAGTTAACCT+GGG + chr2_2:55798385-55798404 None:intergenic 45.0%
TGAGTGATCCAGAGTTAACC+TGG + chr2_2:55798386-55798405 None:intergenic 45.0%
TCTTGTGTGACTTTGGCAGA+CGG + chr2_2:55798471-55798490 None:intergenic 45.0%
! AGATGCACATAAGCTTTGGC+AGG + chr2_2:55798632-55798651 None:intergenic 45.0%
TATACGCCATAGCAGTTACC+GGG - chr2_2:55798845-55798864 Msa0259020:intron 45.0%
AGGGAGTGATCTTCCAGTAA+TGG - chr2_2:55798869-55798888 Msa0259020:intron 45.0%
TTTCCTCTTCAGCTGTAGGA+AGG + chr2_2:55799154-55799173 None:intergenic 45.0%
GCTGCAGCAAAATAGATTGG+AGG - chr2_2:55799259-55799278 Msa0259020:five_prime_UTR 45.0%
! GTTCTCAAGCCCTTTGGAAA+AGG - chr2_2:55799293-55799312 Msa0259020:five_prime_UTR 45.0%
! CAAGCCCTTTGGAAAAGGTA+AGG - chr2_2:55799298-55799317 Msa0259020:five_prime_UTR 45.0%
! GGAGACCTTACCTTTTCCAA+AGG + chr2_2:55799306-55799325 None:intergenic 45.0%
GAAAAGGTAAGGTCTCCTCA+AGG - chr2_2:55799309-55799328 Msa0259020:five_prime_UTR 45.0%
AAGGGAGACAGCTATTTGGT+TGG - chr2_2:55799328-55799347 Msa0259020:five_prime_UTR 45.0%
! TGGTTGGCCAAGAGTCTAAA+AGG - chr2_2:55799344-55799363 Msa0259020:five_prime_UTR 45.0%
AGTAGGGGACGTAGTTAGTA+AGG - chr2_2:55799383-55799402 Msa0259020:five_prime_UTR 45.0%
!!! TCTAATAATAAAAATAATTT+TGG - chr2_2:55792704-55792723 Msa0259020:CDS 5.0%
GCAGTTGAAAGACCAGCTGT+CGG - chr2_2:55791177-55791196 Msa0259020:three_prime_UTR 50.0%
! ACTGTTTCTCACTCTCACGC+TGG + chr2_2:55791401-55791420 None:intergenic 50.0%
!! CAAGGAAGCTTGGGTTGAGA+AGG - chr2_2:55792163-55792182 Msa0259020:three_prime_UTR 50.0%
!!! TTTTTAGGTTCAGGGTGCCG+AGG - chr2_2:55792585-55792604 Msa0259020:CDS 50.0%
GTTGTTGGAGGTTCGATCCT+CGG + chr2_2:55792605-55792624 None:intergenic 50.0%
GGTGGAGACATGTGAGTCTT+CGG - chr2_2:55793293-55793312 Msa0259020:CDS 50.0%
TGGGGCTTACTTTCCTGAAG+AGG - chr2_2:55793440-55793459 Msa0259020:five_prime_UTR 50.0%
!! GGCTTTGTTTGCGAGTTTGG+CGG - chr2_2:55795485-55795504 Msa0259020:intron 50.0%
!! GCTTTGTTTGCGAGTTTGGC+GGG - chr2_2:55795486-55795505 Msa0259020:intron 50.0%
! CTTTGTTTGCGAGTTTGGCG+GGG - chr2_2:55795487-55795506 Msa0259020:intron 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG - chr2_2:55795515-55795534 Msa0259020:intron 50.0%
ATAGAGGAAAAAGGGAGGGG+AGG - chr2_2:55795556-55795575 Msa0259020:intron 50.0%
TAGAGGAAAAAGGGAGGGGA+GGG - chr2_2:55795557-55795576 Msa0259020:intron 50.0%
GTATTGGAGGAGGGATTTGG+GGG - chr2_2:55795642-55795661 Msa0259020:intron 50.0%
TATTGGAGGAGGGATTTGGG+GGG - chr2_2:55795643-55795662 Msa0259020:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG + chr2_2:55795833-55795852 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr2_2:55795840-55795859 None:intergenic 50.0%
ACTAAGTGGAGTCGGTTGCA+TGG + chr2_2:55795905-55795924 None:intergenic 50.0%
! ATGCAACCGACTCCACTTAG+TGG - chr2_2:55795904-55795923 Msa0259020:intron 50.0%
! TGCAACCGACTCCACTTAGT+GGG - chr2_2:55795905-55795924 Msa0259020:intron 50.0%
! CTGCTGTTTGTTAAGGGTGG+GGG - chr2_2:55796263-55796282 Msa0259020:intron 50.0%
! GGGAGGCAAAGTACCAATAG+AGG + chr2_2:55796530-55796549 None:intergenic 50.0%
TATAGACGCGCGTGTTTGTG+TGG - chr2_2:55796692-55796711 Msa0259020:intron 50.0%
ATAGACGCGCGTGTTTGTGT+GGG - chr2_2:55796693-55796712 Msa0259020:intron 50.0%
TTACTGTTGGACGATGCTCG+GGG + chr2_2:55796959-55796978 None:intergenic 50.0%
CTTACTGTTGGACGATGCTC+GGG + chr2_2:55796960-55796979 None:intergenic 50.0%
GAGGTAGACCTGTCATCGAT+TGG - chr2_2:55797302-55797321 Msa0259020:intron 50.0%
CATAAGGTGACACCACCATG+TGG - chr2_2:55797848-55797867 Msa0259020:intron 50.0%
GATGTCTCATCTTAGCCTCC+TGG + chr2_2:55798042-55798061 None:intergenic 50.0%
ACATGTGGCAGATGACCGTT+AGG + chr2_2:55798073-55798092 None:intergenic 50.0%
AACCAACACCCCCTGAACAT+GGG - chr2_2:55798230-55798249 Msa0259020:intron 50.0%
CTACATCTGATTCCGGTGAG+TGG - chr2_2:55798440-55798459 Msa0259020:intron 50.0%
AGGAGCAATTTCAGCCACTG+AGG + chr2_2:55798694-55798713 None:intergenic 50.0%
GCAACAGAAAGACCAGCTTC+TGG - chr2_2:55798786-55798805 Msa0259020:intron 50.0%
ATGACATCATCGAGAGCTCG+GGG + chr2_2:55798819-55798838 None:intergenic 50.0%
GATGACATCATCGAGAGCTC+GGG + chr2_2:55798820-55798839 None:intergenic 50.0%
GGATGACATCATCGAGAGCT+CGG + chr2_2:55798821-55798840 None:intergenic 50.0%
TAGCCTTCCTACAGCTGAAG+AGG - chr2_2:55799148-55799167 Msa0259020:intron 50.0%
GGCATTTCCTCTTCAGCTGT+AGG + chr2_2:55799158-55799177 None:intergenic 50.0%
AAGTGCATCCGCTCTCTGTT+TGG + chr2_2:55799210-55799229 None:intergenic 50.0%
AGAGAGCGGATGCACTTGAA+GGG - chr2_2:55799213-55799232 Msa0259020:five_prime_UTR 50.0%
GCAGTTGTTCTCAAGCCCTT+TGG - chr2_2:55799287-55799306 Msa0259020:five_prime_UTR 50.0%
CCAAATAGCTGTCTCCCTTG+AGG + chr2_2:55799327-55799346 None:intergenic 50.0%
CCTCAAGGGAGACAGCTATT+TGG - chr2_2:55799324-55799343 Msa0259020:five_prime_UTR 50.0%
ATCATGGAGCAGATCGGTCG+CGG - chr2_2:55791584-55791603 Msa0259020:three_prime_UTR 55.0%
GGCTTGCAAGGCAAACGGAA+CGG - chr2_2:55791772-55791791 Msa0259020:three_prime_UTR 55.0%
TTTGCGAGTTTGGCGGGGAA+GGG - chr2_2:55795492-55795511 Msa0259020:intron 55.0%
! AAAAAGGGAGGGGAGGGCAT+TGG - chr2_2:55795563-55795582 Msa0259020:intron 55.0%
!! AAAAGGGAGGGGAGGGCATT+GGG - chr2_2:55795564-55795583 Msa0259020:intron 55.0%
ATTGGAGGAGGGATTTGGGG+GGG - chr2_2:55795644-55795663 Msa0259020:intron 55.0%
! AGGGGAAGGGAAGGCTTTGA+GGG + chr2_2:55795820-55795839 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + chr2_2:55795834-55795853 None:intergenic 55.0%
AGAGGGAGTCTGATGAAGGC+TGG - chr2_2:55797526-55797545 Msa0259020:intron 55.0%
!! GGTGGTGTCACCTTATGTCG+AGG + chr2_2:55797845-55797864 None:intergenic 55.0%
GGTGGCTTAAGTAGGCTTGG+AGG + chr2_2:55797932-55797951 None:intergenic 55.0%
GAGGGTGGCTTAAGTAGGCT+TGG + chr2_2:55797935-55797954 None:intergenic 55.0%
TTGCGTCCCAGAAATGAGGG+TGG + chr2_2:55797950-55797969 None:intergenic 55.0%
CTGGGACGCAATAAGCAAGC+CGG - chr2_2:55797959-55797978 Msa0259020:intron 55.0%
TGGGACGCAATAAGCAAGCC+GGG - chr2_2:55797960-55797979 Msa0259020:intron 55.0%
GAACCAACACCCCCTGAACA+TGG - chr2_2:55798229-55798248 Msa0259020:intron 55.0%
GGATCACGTGCCAACAGTAG+TGG - chr2_2:55798277-55798296 Msa0259020:intron 55.0%
CAGACGGAACATCCACTCAC+CGG + chr2_2:55798455-55798474 None:intergenic 55.0%
!! GAGGGAAAGAGTGTCCTCAG+TGG - chr2_2:55798677-55798696 Msa0259020:intron 55.0%
GCCATAGCAGTTACCGGGTA+GGG - chr2_2:55798850-55798869 Msa0259020:intron 55.0%
TCCCTACCCGGTAACTGCTA+TGG + chr2_2:55798854-55798873 None:intergenic 55.0%
CTGGAAGATCACTCCCTACC+CGG + chr2_2:55798866-55798885 None:intergenic 55.0%
GCATCTTGCTCTTCAACGCC+AGG + chr2_2:55799095-55799114 None:intergenic 55.0%
CAGAGAGCGGATGCACTTGA+AGG - chr2_2:55799212-55799231 Msa0259020:five_prime_UTR 55.0%
AGGGAGGATACACCGACAGC+TGG + chr2_2:55791192-55791211 None:intergenic 60.0%
CAGATCGGTCGCGGTGCATT+TGG - chr2_2:55791593-55791612 Msa0259020:three_prime_UTR 60.0%
GTTTGCGAGTTTGGCGGGGA+AGG - chr2_2:55795491-55795510 Msa0259020:intron 60.0%
!! AAAGGGAGGGGAGGGCATTG+GGG - chr2_2:55795565-55795584 Msa0259020:intron 60.0%
TTGGAGGAGGGATTTGGGGG+GGG - chr2_2:55795645-55795664 Msa0259020:intron 60.0%
GAGGGGAAGGGAAGGCTTTG+AGG + chr2_2:55795821-55795840 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+AGG + chr2_2:55795829-55795848 None:intergenic 60.0%
GGGAGTCTGATGAAGGCTGG+TGG - chr2_2:55797529-55797548 Msa0259020:intron 60.0%
! CTCCCATGTTCAGGGGGTGT+TGG + chr2_2:55798235-55798254 None:intergenic 60.0%
CATCGAGAGCTCGGGGAAGA+TGG + chr2_2:55798812-55798831 None:intergenic 60.0%
CGCCATAGCAGTTACCGGGT+AGG - chr2_2:55798849-55798868 Msa0259020:intron 60.0%
CGAGTTTGGCGGGGAAGGGA+GGG - chr2_2:55795496-55795515 Msa0259020:intron 65.0%
GAGTTTGGCGGGGAAGGGAG+GGG - chr2_2:55795497-55795516 Msa0259020:intron 65.0%
GGGAAGGGAGGGGAAGGCTT+GGG - chr2_2:55795507-55795526 Msa0259020:intron 65.0%
!! AAGGGAGGGGAGGGCATTGG+GGG - chr2_2:55795566-55795585 Msa0259020:intron 65.0%
TGGAGGAGGGATTTGGGGGG+GGG - chr2_2:55795646-55795665 Msa0259020:intron 65.0%
CGGGGAAGATGGCCAGAAGC+TGG + chr2_2:55798801-55798820 None:intergenic 65.0%
GCGAGTTTGGCGGGGAAGGG+AGG - chr2_2:55795495-55795514 Msa0259020:intron 70.0%
TTGGCGGGGAAGGGAGGGGA+AGG - chr2_2:55795501-55795520 Msa0259020:intron 70.0%
GGGGAAGGGAGGGGAAGGCT+TGG - chr2_2:55795506-55795525 Msa0259020:intron 70.0%
GGAGGAGGGATTTGGGGGGG+GGG - chr2_2:55795647-55795666 Msa0259020:intron 70.0%
GAGGAGGGATTTGGGGGGGG+GGG - chr2_2:55795648-55795667 Msa0259020:intron 70.0%
AGGAGGGATTTGGGGGGGGG+GGG - chr2_2:55795649-55795668 Msa0259020:intron 70.0%
GGAGGGATTTGGGGGGGGGG+GGG - chr2_2:55795650-55795669 Msa0259020:intron 75.0%
GAGGGATTTGGGGGGGGGGG+GGG - chr2_2:55795651-55795670 Msa0259020:intron 75.0%
AGGGATTTGGGGGGGGGGGG+GGG - chr2_2:55795652-55795671 Msa0259020:intron 75.0%
! GGGATTTGGGGGGGGGGGGG+GGG - chr2_2:55795653-55795672 Msa0259020:intron 80.0%
! GGATTTGGGGGGGGGGGGGG+GGG - chr2_2:55795654-55795673 Msa0259020:intron 80.0%
! TTGGGGGGGGGGGGGGGGGT+TGG - chr2_2:55795658-55795677 Msa0259020:intron 85.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 55791177 55799685 55791177 ID=Msa0259020;Name=Msa0259020
chr2_2 mRNA 55791177 55799685 55791177 ID=Msa0259020-mRNA-1;Parent=Msa0259020;Name=Msa0259020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=1549|1|1|1|0.92|0.85|14|1088|341
chr2_2 exon 55791177 55793053 55791177 ID=Msa0259020-mRNA-1:exon:16860;Parent=Msa0259020-mRNA-1
chr2_2 exon 55793145 55793794 55793145 ID=Msa0259020-mRNA-1:exon:16859;Parent=Msa0259020-mRNA-1
chr2_2 exon 55793888 55793939 55793888 ID=Msa0259020-mRNA-1:exon:16858;Parent=Msa0259020-mRNA-1
chr2_2 exon 55794296 55794369 55794296 ID=Msa0259020-mRNA-1:exon:16857;Parent=Msa0259020-mRNA-1
chr2_2 exon 55795663 55795712 55795663 ID=Msa0259020-mRNA-1:exon:16856;Parent=Msa0259020-mRNA-1
chr2_2 exon 55795785 55795866 55795785 ID=Msa0259020-mRNA-1:exon:16855;Parent=Msa0259020-mRNA-1
chr2_2 exon 55796949 55796998 55796949 ID=Msa0259020-mRNA-1:exon:16854;Parent=Msa0259020-mRNA-1
chr2_2 exon 55797092 55797134 55797092 ID=Msa0259020-mRNA-1:exon:16853;Parent=Msa0259020-mRNA-1
chr2_2 exon 55797230 55797310 55797230 ID=Msa0259020-mRNA-1:exon:16852;Parent=Msa0259020-mRNA-1
chr2_2 exon 55797401 55797446 55797401 ID=Msa0259020-mRNA-1:exon:16851;Parent=Msa0259020-mRNA-1
chr2_2 exon 55797559 55797605 55797559 ID=Msa0259020-mRNA-1:exon:16850;Parent=Msa0259020-mRNA-1
chr2_2 exon 55798678 55798743 55798678 ID=Msa0259020-mRNA-1:exon:16849;Parent=Msa0259020-mRNA-1
chr2_2 exon 55799044 55799110 55799044 ID=Msa0259020-mRNA-1:exon:16848;Parent=Msa0259020-mRNA-1
chr2_2 exon 55799208 55799685 55799208 ID=Msa0259020-mRNA-1:exon:16847;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55799208 55799685 55799208 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55799044 55799110 55799044 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55798678 55798743 55798678 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55797559 55797605 55797559 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55797401 55797446 55797401 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55797230 55797310 55797230 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55797092 55797134 55797092 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55796949 55796998 55796949 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55795785 55795866 55795785 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55795663 55795712 55795663 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55794296 55794369 55794296 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55793888 55793939 55793888 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 five_prime_UTR 55793382 55793794 55793382 ID=Msa0259020-mRNA-1:five_prime_utr;Parent=Msa0259020-mRNA-1
chr2_2 CDS 55793145 55793381 55793145 ID=Msa0259020-mRNA-1:cds;Parent=Msa0259020-mRNA-1
chr2_2 CDS 55792265 55793053 55792265 ID=Msa0259020-mRNA-1:cds;Parent=Msa0259020-mRNA-1
chr2_2 three_prime_UTR 55791177 55792264 55791177 ID=Msa0259020-mRNA-1:three_prime_utr;Parent=Msa0259020-mRNA-1
Gene Sequence

>Msa0259020

ATGGGACCAAAACATGAAAAGGTTAAAGAGATGAGTTCTCCAATGAGAGGGAGTCTGATGAAGGCTGGTGGTATATCAACACAGAAAATTAATACAGAGACCTTGTGTAAATTTCCGAAATCAGATTTCGGTGTTAATGGTTTGAAGCCTAATGTAGAGGTGCCAACTTTAGCACCTTCAAAAGCAACCCTTCATTCTGCAAAACGAATCCAGGGATCACATACTTCAAAACATCAGTTACCGATGATAGAACCTACACCAAAAACTAAACCTCGACATAAGGTGACACCACCATGTGGTCCTATCAAACAAGTAGTAGCAGAACCTGAAGTTTCTGCACAGCCAAAACAAAAGACTCCTCCAAGCCTACTTAAGCCACCCTCATTTCTGGGACGCAATAAGCAAGCCGGGCATGATATGCCAAATGCAGCAAATGATAAAGAAAGGTTAGATACAAATAAAATAGCCCAGGAGGCTAAGATGAGACATCATCGGTTGCCTAACGGTCATCTGCCACATGTTTCTAGAGAGCCTTTGAAGGCTTTTGAAAGTAGTACCAAAGGAATGCAAACAACCAGCAACAATTCTGTTTCATCTTCAGTCTCTGTTCAAGGATTTGAACTTTTTGACTTTGCAAACACTTTTATTGACTTGAGTGAACCAACACCCCCTGAACATGGGAGTTTTAATCACACTGAAATTGTGGGATCACGTGCCAACAGTAGTGGACCTGATGAAAATATTTCTGGCGAATCCTCTCCGTTTACACCAACTTTTCAGAATACCATAACTCGTAATGAGAAAGTAAGTCCCAGGTTAACTCTGGATCACTCAGTGATGTATGATAGTTTTCTTATAAATCAAACAACTACATCTGATTCCGGTGAGTGGATGTTCCGTCTGCCAAAGTCACACAAGAAATCAAAGACCTTCAAGATTTTTGTAAGGAAATGGCTTCAATCAATTCTCTCAAACATTCACTTTCCATTTCTGGAAAAAAGTCAGTTTGTGAAGTTAGTCCAGTAA
Protein sequence

>Msa0259020

MGPKHEKVKEMSSPMRGSLMKAGGISTQKINTETLCKFPKSDFGVNGLKPNVEVPTLAPSKATLHSAKRIQGSHTSKHQLPMIEPTPKTKPRHKVTPPCGPIKQVVAEPEVSAQPKQKTPPSLLKPPSFLGRNKQAGHDMPNAANDKERLDTNKIAQEAKMRHHRLPNGHLPHVSREPLKAFESSTKGMQTTSNNSVSSSVSVQGFELFDFANTFIDLSEPTPPEHGSFNHTEIVGSRANSSGPDENISGESSPFTPTFQNTITRNEKVSPRLTLDHSVMYDSFLINQTTTSDSGEWMFRLPKSHKKSKTFKIFVRKWLQSILSNIHFPFLEKSQFVKLVQ*