Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259170 | RHN75408.1 | 70.130 | 77 | 16 | 3 | 163 | 236 | 86 | 158 | 9.52e-21 | 96.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259170 | sp|Q8LJS2|HDT1_SOYBN | 58.904 | 73 | 21 | 4 | 164 | 231 | 203 | 271 | 4.22e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259170 | A0A396JGD3 | 70.130 | 77 | 16 | 3 | 163 | 236 | 86 | 158 | 4.55e-21 | 96.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0259160 | Msa0259170 | 0.851234 | 1.013229e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259170 | MtrunA17_Chr2g0320884 | 70.130 | 77 | 16 | 3 | 163 | 236 | 238 | 310 | 8.29e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 76 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTCATTGGGCCAGGTTAT+TGG | 0.240051 | 2_2:+56031582 | None:intergenic |
| TCCTCCAGACTTGGGAGATT+TGG | 0.246379 | 2_2:+56029441 | None:intergenic |
| AAGAATGGCAACGTTTCTTT+AGG | 0.249680 | 2_2:+56031524 | None:intergenic |
| AGTCATTGGGCCAGGTTATT+GGG | 0.264319 | 2_2:+56031583 | None:intergenic |
| TTCCATTCAAGAGGCCAAAT+TGG | 0.266009 | 2_2:-56030829 | Msa0259170:CDS |
| TCAGAAGAGGCGATCCGTTT+TGG | 0.277545 | 2_2:-56030782 | Msa0259170:CDS |
| TGACGAATGTGAGAGGCTTT+TGG | 0.284374 | 2_2:-56031111 | Msa0259170:CDS |
| TCAGTCTTTCCACCTTCCTT+AGG | 0.293756 | 2_2:+56029466 | None:intergenic |
| TCTTTATCTTTCTCCTCGTT+TGG | 0.314238 | 2_2:+56030500 | None:intergenic |
| TTTCTCCTCGTTTGGATTCA+CGG | 0.348237 | 2_2:+56030508 | None:intergenic |
| ATGGCCTGAGAAATCCAATT+TGG | 0.350857 | 2_2:+56030815 | None:intergenic |
| CTGTATGCTGCCGGATGTTC+CGG | 0.359686 | 2_2:-56031059 | Msa0259170:CDS |
| AACATAGTATTCCATTGAAT+CGG | 0.384115 | 2_2:+56030899 | None:intergenic |
| TTCTGCAGGTGCAGCATTCA+TGG | 0.392248 | 2_2:+56030532 | None:intergenic |
| ATCCAATTTGGCCTCTTGAA+TGG | 0.394239 | 2_2:+56030827 | None:intergenic |
| TTTGGATTCACGGCTTCTGC+AGG | 0.408965 | 2_2:+56030518 | None:intergenic |
| CAGTCTTTCCACCTTCCTTA+GGG | 0.410326 | 2_2:+56029467 | None:intergenic |
| GGTCATTTCAAGCCAGGAGG+GGG | 0.411102 | 2_2:+56031025 | None:intergenic |
| TTATATTCTTCCTTGATTGA+AGG | 0.412856 | 2_2:+56030927 | None:intergenic |
| CTTCACTTAGCAGCATGCTT+TGG | 0.415029 | 2_2:+56029280 | None:intergenic |
| TTTGGCCTCTTGAATGGAAT+AGG | 0.416149 | 2_2:+56030833 | None:intergenic |
| AGTTTCTGAAGCAGATTCAT+TGG | 0.422515 | 2_2:+56030348 | None:intergenic |
| AGAATGGCAACGTTTCTTTA+GGG | 0.424217 | 2_2:+56031525 | None:intergenic |
| ATATAATCTGCCCGATTCAA+TGG | 0.425503 | 2_2:-56030910 | Msa0259170:CDS |
| GTTTCTGAAGCAGATTCATT+GGG | 0.431718 | 2_2:+56030349 | None:intergenic |
| CTGAAAACGCTCCTTGCTGT+TGG | 0.448556 | 2_2:+56030872 | None:intergenic |
| GATGCCAAATCTCCCAAGTC+TGG | 0.449028 | 2_2:-56029445 | Msa0259170:CDS |
| CTCTTCTGAGCGCAAGCTGA+TGG | 0.450351 | 2_2:+56030796 | None:intergenic |
| GTTGTCTTCACCGGAACATC+CGG | 0.451899 | 2_2:+56031049 | None:intergenic |
| TTGTTAGATGGTAAGAAAGC+TGG | 0.456417 | 2_2:-56029508 | Msa0259170:intron |
| TGAAAACGCTCCTTGCTGTT+GGG | 0.458550 | 2_2:+56030873 | None:intergenic |
| ATCTCCCAAGTCTGGAGGAC+AGG | 0.468232 | 2_2:-56029437 | Msa0259170:CDS |
| GAGGCCAAATTGGATTTCTC+AGG | 0.469828 | 2_2:-56030819 | Msa0259170:CDS |
| TGTTGCCATGACGCTTCCGC+TGG | 0.471775 | 2_2:+56031472 | None:intergenic |
| TTTCCACCTTCCTTAGGGTG+AGG | 0.476494 | 2_2:+56029472 | None:intergenic |
| CCATGACGCTTCCGCTGGAA+TGG | 0.483116 | 2_2:+56031477 | None:intergenic |
| TCATTTCAAGCCAGGAGGGG+GGG | 0.486250 | 2_2:+56031027 | None:intergenic |
| ACTGTCCTGTCCTCCAGACT+TGG | 0.487817 | 2_2:+56029432 | None:intergenic |
| TATTATAAGCATACCCAAAA+CGG | 0.489980 | 2_2:+56030768 | None:intergenic |
| GTCATTTCAAGCCAGGAGGG+GGG | 0.497073 | 2_2:+56031026 | None:intergenic |
| TTCTGATGAGACTGTGAAGA+AGG | 0.500279 | 2_2:-56030477 | Msa0259170:intron |
| CATTGTGGTCATTTCAAGCC+AGG | 0.506741 | 2_2:+56031019 | None:intergenic |
| CATCAGCTTGCGCTCAGAAG+AGG | 0.511730 | 2_2:-56030795 | Msa0259170:CDS |
| GTGGTCATTTCAAGCCAGGA+GGG | 0.513727 | 2_2:+56031023 | None:intergenic |
| ACATAGTATTCCATTGAATC+GGG | 0.517546 | 2_2:+56030900 | None:intergenic |
| CCATTCCAGCGGAAGCGTCA+TGG | 0.524905 | 2_2:-56031477 | Msa0259170:exon |
| ACCACTCTTGAGAAAACTGC+TGG | 0.530890 | 2_2:-56030298 | Msa0259170:intron |
| AAATTGAAAATGTAGAAGAA+TGG | 0.536198 | 2_2:+56031509 | None:intergenic |
| AAAGACATGGCCTTCAATCA+AGG | 0.537504 | 2_2:-56030937 | Msa0259170:CDS |
| GCGTATCATCTGTATGCTGC+CGG | 0.537867 | 2_2:-56031068 | Msa0259170:CDS |
| CAATGACACAAAATTTGTAT+CGG | 0.540125 | 2_2:-56031001 | Msa0259170:CDS |
| AACAATAATATAGAGTTGTA+CGG | 0.547588 | 2_2:-56031633 | Msa0259170:five_prime_UTR |
| GTCATTGGGCCAGGTTATTG+GGG | 0.551398 | 2_2:+56031584 | None:intergenic |
| AAGGTCAGACCCCAATAACC+TGG | 0.554471 | 2_2:-56031593 | Msa0259170:five_prime_UTR |
| AGGGTTTGTAAATTTGTACT+CGG | 0.559267 | 2_2:+56031544 | None:intergenic |
| TACAGCAACTCCTCACCCTA+AGG | 0.563499 | 2_2:-56029482 | Msa0259170:CDS |
| GAAAGCTGTGGATGACCTGA+TGG | 0.569039 | 2_2:-56030967 | Msa0259170:CDS |
| AGCGTCATGGCAACACCGCT+AGG | 0.576182 | 2_2:-56031464 | Msa0259170:intron |
| CGTACACGTGCAGCATAGCT+AGG | 0.578500 | 2_2:+56030563 | None:intergenic |
| CTGTCCTGTCCTCCAGACTT+GGG | 0.588333 | 2_2:+56029433 | None:intergenic |
| TGGTCATTTCAAGCCAGGAG+GGG | 0.596521 | 2_2:+56031024 | None:intergenic |
| ATAATATAGAGTTGTACGGT+GGG | 0.622366 | 2_2:-56031629 | Msa0259170:five_prime_UTR |
| TTGACTGCAACAACATAGCA+AGG | 0.626889 | 2_2:-56029303 | Msa0259170:CDS |
| ACTCCTCACCCTAAGGAAGG+TGG | 0.628758 | 2_2:-56029475 | Msa0259170:CDS |
| AAACGCTCCTTGCTGTTGGG+CGG | 0.634004 | 2_2:+56030876 | None:intergenic |
| GCTGACCTATTCCATTCAAG+AGG | 0.640154 | 2_2:-56030838 | Msa0259170:CDS |
| GCAACTCCTCACCCTAAGGA+AGG | 0.643445 | 2_2:-56029478 | Msa0259170:CDS |
| GCCAAATCTCCCAAGTCTGG+AGG | 0.652249 | 2_2:-56029442 | Msa0259170:CDS |
| AATAATATAGAGTTGTACGG+TGG | 0.652412 | 2_2:-56031630 | Msa0259170:five_prime_UTR |
| TGTGGTCATTTCAAGCCAGG+AGG | 0.654209 | 2_2:+56031022 | None:intergenic |
| GAATCAAGTCAAGAAAGCTG+TGG | 0.656882 | 2_2:-56030979 | Msa0259170:intron |
| AAAGCTGTGGATGACCTGAT+GGG | 0.666545 | 2_2:-56030966 | Msa0259170:CDS |
| CTATGTTCCGCCCAACAGCA+AGG | 0.666903 | 2_2:-56030883 | Msa0259170:CDS |
| TGATGGGATGTGAAAAGACA+TGG | 0.686137 | 2_2:-56030950 | Msa0259170:CDS |
| AGATTGACAAGGGAAAGAAG+AGG | 0.697097 | 2_2:-56030372 | Msa0259170:CDS |
| AGAAGCCGTGAATCCAAACG+AGG | 0.748894 | 2_2:-56030513 | Msa0259170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATGTTATAATTGTTA+TGG | - | chr2_2:56030522-56030541 | Msa0259170:CDS | 10.0% |
| !! | AAAAATTTAAACACAAATTA+CGG | + | chr2_2:56031423-56031442 | None:intergenic | 10.0% |
| !!! | ATTTTATGTTATAATTGTTA+TGG | - | chr2_2:56030522-56030541 | Msa0259170:CDS | 10.0% |
| !! | AAAAATTTAAACACAAATTA+CGG | + | chr2_2:56031423-56031442 | None:intergenic | 10.0% |
| !!! | AAATCATTTTCATAATGAAT+GGG | - | chr2_2:56029741-56029760 | Msa0259170:intron | 15.0% |
| !! | AGGATATATAAATCTATATA+TGG | + | chr2_2:56031183-56031202 | None:intergenic | 15.0% |
| !! | AGGATATATAAATCTATATA+TGG | + | chr2_2:56031183-56031202 | None:intergenic | 15.0% |
| !!! | AAATCATTTTCATAATGAAT+GGG | - | chr2_2:56029741-56029760 | Msa0259170:intron | 15.0% |
| !! | AGGATATATAAATCTATATA+TGG | + | chr2_2:56031183-56031202 | None:intergenic | 15.0% |
| !! | AGGATATATAAATCTATATA+TGG | + | chr2_2:56031183-56031202 | None:intergenic | 15.0% |
| !! | AACAATAATATAGAGTTGTA+CGG | - | chr2_2:56029316-56029335 | Msa0259170:intron | 20.0% |
| !! | AAATTGAAAATGTAGAAGAA+TGG | + | chr2_2:56029443-56029462 | None:intergenic | 20.0% |
| !! | AGTGAATCTATTAAAAAATC+TGG | + | chr2_2:56029587-56029606 | None:intergenic | 20.0% |
| !!! | GAAATCATTTTCATAATGAA+TGG | - | chr2_2:56029740-56029759 | Msa0259170:intron | 20.0% |
| !!! | TTTAATTTTGAAGATTGACA+AGG | - | chr2_2:56030566-56030585 | Msa0259170:CDS | 20.0% |
| !!! | TTAATTTTGAAGATTGACAA+GGG | - | chr2_2:56030567-56030586 | Msa0259170:CDS | 20.0% |
| !! | TTACAATACATAATACAACT+TGG | + | chr2_2:56030682-56030701 | None:intergenic | 20.0% |
| !! | GTAGAAAGATATAAACAATA+GGG | + | chr2_2:56030850-56030869 | None:intergenic | 20.0% |
| !! | AGTAGAAAGATATAAACAAT+AGG | + | chr2_2:56030851-56030870 | None:intergenic | 20.0% |
| !!! | GTGTTTAAATTTTTGTTAGA+TGG | - | chr2_2:56031429-56031448 | Msa0259170:intron | 20.0% |
| !!! | ATATGTTCATTACTTTTAGA+TGG | - | chr2_2:56031576-56031595 | Msa0259170:five_prime_UTR | 20.0% |
| !!! | TATGTTCATTACTTTTAGAT+GGG | - | chr2_2:56031577-56031596 | Msa0259170:five_prime_UTR | 20.0% |
| !! | TAAAGACAACAAAAAAAGAA+AGG | + | chr2_2:56031613-56031632 | None:intergenic | 20.0% |
| !! | AACAATAATATAGAGTTGTA+CGG | - | chr2_2:56029316-56029335 | Msa0259170:intron | 20.0% |
| !! | AAATTGAAAATGTAGAAGAA+TGG | + | chr2_2:56029443-56029462 | None:intergenic | 20.0% |
| !! | AGTGAATCTATTAAAAAATC+TGG | + | chr2_2:56029587-56029606 | None:intergenic | 20.0% |
| !!! | GAAATCATTTTCATAATGAA+TGG | - | chr2_2:56029740-56029759 | Msa0259170:intron | 20.0% |
| !!! | TTTAATTTTGAAGATTGACA+AGG | - | chr2_2:56030566-56030585 | Msa0259170:CDS | 20.0% |
| !!! | TTAATTTTGAAGATTGACAA+GGG | - | chr2_2:56030567-56030586 | Msa0259170:CDS | 20.0% |
| !! | TTACAATACATAATACAACT+TGG | + | chr2_2:56030682-56030701 | None:intergenic | 20.0% |
| !! | GTAGAAAGATATAAACAATA+GGG | + | chr2_2:56030850-56030869 | None:intergenic | 20.0% |
| !! | AGTAGAAAGATATAAACAAT+AGG | + | chr2_2:56030851-56030870 | None:intergenic | 20.0% |
| !!! | GTGTTTAAATTTTTGTTAGA+TGG | - | chr2_2:56031429-56031448 | Msa0259170:intron | 20.0% |
| !!! | ATATGTTCATTACTTTTAGA+TGG | - | chr2_2:56031576-56031595 | Msa0259170:five_prime_UTR | 20.0% |
| !!! | TATGTTCATTACTTTTAGAT+GGG | - | chr2_2:56031577-56031596 | Msa0259170:five_prime_UTR | 20.0% |
| !! | TAAAGACAACAAAAAAAGAA+AGG | + | chr2_2:56031613-56031632 | None:intergenic | 20.0% |
| ! | AAACCCAAAAAAAAGTCATT+GGG | + | chr2_2:56029382-56029401 | None:intergenic | 25.0% |
| ! | TAAACCCAAAAAAAAGTCAT+TGG | + | chr2_2:56029383-56029402 | None:intergenic | 25.0% |
| ! | AATTACAGAAGAAGTTTACA+GGG | + | chr2_2:56029523-56029542 | None:intergenic | 25.0% |
| ! | AAATTACAGAAGAAGTTTAC+AGG | + | chr2_2:56029524-56029543 | None:intergenic | 25.0% |
| !!! | ATACAAATTTTGTGTCATTG+TGG | + | chr2_2:56029948-56029967 | None:intergenic | 25.0% |
| ! | CAATGACACAAAATTTGTAT+CGG | - | chr2_2:56029948-56029967 | Msa0259170:intron | 25.0% |
| ! | TTATATTCTTCCTTGATTGA+AGG | + | chr2_2:56030025-56030044 | None:intergenic | 25.0% |
| ! | AACATAGTATTCCATTGAAT+CGG | + | chr2_2:56030053-56030072 | None:intergenic | 25.0% |
| ! | TATTATAAGCATACCCAAAA+CGG | + | chr2_2:56030184-56030203 | None:intergenic | 25.0% |
| ! | TTTGGGTATGCTTATAATAT+TGG | - | chr2_2:56030185-56030204 | Msa0259170:intron | 25.0% |
| ! | AAAAAAAAAGAAGACACCTA+TGG | + | chr2_2:56030229-56030248 | None:intergenic | 25.0% |
| !! | AGTGGTATTTTTCTTTTTCT+TGG | + | chr2_2:56030637-56030656 | None:intergenic | 25.0% |
| !! | CTGTTTTCATTTTGTCTAAT+TGG | - | chr2_2:56030718-56030737 | Msa0259170:intron | 25.0% |
| ! | AACACAATAACTTAAGAACT+TGG | + | chr2_2:56030791-56030810 | None:intergenic | 25.0% |
| ! | AGTATTACATTTGTAACAGA+AGG | + | chr2_2:56031203-56031222 | None:intergenic | 25.0% |
| ! | CAAACAATGTTTCAATCTAA+GGG | + | chr2_2:56031300-56031319 | None:intergenic | 25.0% |
| ! | TCAAACAATGTTTCAATCTA+AGG | + | chr2_2:56031301-56031320 | None:intergenic | 25.0% |
| ! | AAACCCAAAAAAAAGTCATT+GGG | + | chr2_2:56029382-56029401 | None:intergenic | 25.0% |
| ! | TAAACCCAAAAAAAAGTCAT+TGG | + | chr2_2:56029383-56029402 | None:intergenic | 25.0% |
| ! | AATTACAGAAGAAGTTTACA+GGG | + | chr2_2:56029523-56029542 | None:intergenic | 25.0% |
| ! | AAATTACAGAAGAAGTTTAC+AGG | + | chr2_2:56029524-56029543 | None:intergenic | 25.0% |
| !!! | ATACAAATTTTGTGTCATTG+TGG | + | chr2_2:56029948-56029967 | None:intergenic | 25.0% |
| ! | CAATGACACAAAATTTGTAT+CGG | - | chr2_2:56029948-56029967 | Msa0259170:intron | 25.0% |
| ! | TTATATTCTTCCTTGATTGA+AGG | + | chr2_2:56030025-56030044 | None:intergenic | 25.0% |
| ! | AACATAGTATTCCATTGAAT+CGG | + | chr2_2:56030053-56030072 | None:intergenic | 25.0% |
| ! | TATTATAAGCATACCCAAAA+CGG | + | chr2_2:56030184-56030203 | None:intergenic | 25.0% |
| ! | TTTGGGTATGCTTATAATAT+TGG | - | chr2_2:56030185-56030204 | Msa0259170:intron | 25.0% |
| ! | AAAAAAAAAGAAGACACCTA+TGG | + | chr2_2:56030229-56030248 | None:intergenic | 25.0% |
| !! | AGTGGTATTTTTCTTTTTCT+TGG | + | chr2_2:56030637-56030656 | None:intergenic | 25.0% |
| !! | CTGTTTTCATTTTGTCTAAT+TGG | - | chr2_2:56030718-56030737 | Msa0259170:intron | 25.0% |
| ! | AACACAATAACTTAAGAACT+TGG | + | chr2_2:56030791-56030810 | None:intergenic | 25.0% |
| ! | AGTATTACATTTGTAACAGA+AGG | + | chr2_2:56031203-56031222 | None:intergenic | 25.0% |
| ! | CAAACAATGTTTCAATCTAA+GGG | + | chr2_2:56031300-56031319 | None:intergenic | 25.0% |
| ! | TCAAACAATGTTTCAATCTA+AGG | + | chr2_2:56031301-56031320 | None:intergenic | 25.0% |
| AATAATATAGAGTTGTACGG+TGG | - | chr2_2:56029319-56029338 | Msa0259170:intron | 30.0% | |
| ATAATATAGAGTTGTACGGT+GGG | - | chr2_2:56029320-56029339 | Msa0259170:intron | 30.0% | |
| AGGGTTTGTAAATTTGTACT+CGG | + | chr2_2:56029408-56029427 | None:intergenic | 30.0% | |
| ! | TTTACATTTTTCCATTCCAG+CGG | - | chr2_2:56029461-56029480 | Msa0259170:CDS | 30.0% |
| ACATAGTATTCCATTGAATC+GGG | + | chr2_2:56030052-56030071 | None:intergenic | 30.0% | |
| TTCTCTAACAATTGTACCAT+AGG | - | chr2_2:56030210-56030229 | Msa0259170:intron | 30.0% | |
| ! | ATAACAACACTAACTTGCAA+AGG | + | chr2_2:56030321-56030340 | None:intergenic | 30.0% |
| TCTAAATGTAACAATGTTGC+TGG | - | chr2_2:56030355-56030374 | Msa0259170:CDS | 30.0% | |
| !! | TAATGGTACATTTGCTATCA+CGG | - | chr2_2:56030495-56030514 | Msa0259170:CDS | 30.0% |
| ! | TTCTTTTTCTTGGAAGAAAC+TGG | + | chr2_2:56030627-56030646 | None:intergenic | 30.0% |
| TAACTTAAGAACTTGGCAAA+TGG | + | chr2_2:56030784-56030803 | None:intergenic | 30.0% | |
| ! | ATTGTGTTGTTGATAGATCA+TGG | - | chr2_2:56030803-56030822 | Msa0259170:CDS | 30.0% |
| !! | AATGTAGCTTGTTTGTATCA+TGG | - | chr2_2:56031047-56031066 | Msa0259170:CDS | 30.0% |
| ! | CATGTCAATGCTGAAATTTT+AGG | - | chr2_2:56031327-56031346 | Msa0259170:intron | 30.0% |
| !! | TTTTTGTTGTCTTTATTGCC+AGG | - | chr2_2:56031618-56031637 | Msa0259170:five_prime_UTR | 30.0% |
| AATAATATAGAGTTGTACGG+TGG | - | chr2_2:56029319-56029338 | Msa0259170:intron | 30.0% | |
| ATAATATAGAGTTGTACGGT+GGG | - | chr2_2:56029320-56029339 | Msa0259170:intron | 30.0% | |
| AGGGTTTGTAAATTTGTACT+CGG | + | chr2_2:56029408-56029427 | None:intergenic | 30.0% | |
| ! | TTTACATTTTTCCATTCCAG+CGG | - | chr2_2:56029461-56029480 | Msa0259170:CDS | 30.0% |
| ACATAGTATTCCATTGAATC+GGG | + | chr2_2:56030052-56030071 | None:intergenic | 30.0% | |
| TTCTCTAACAATTGTACCAT+AGG | - | chr2_2:56030210-56030229 | Msa0259170:intron | 30.0% | |
| ! | ATAACAACACTAACTTGCAA+AGG | + | chr2_2:56030321-56030340 | None:intergenic | 30.0% |
| TCTAAATGTAACAATGTTGC+TGG | - | chr2_2:56030355-56030374 | Msa0259170:CDS | 30.0% | |
| !! | TAATGGTACATTTGCTATCA+CGG | - | chr2_2:56030495-56030514 | Msa0259170:CDS | 30.0% |
| ! | TTCTTTTTCTTGGAAGAAAC+TGG | + | chr2_2:56030627-56030646 | None:intergenic | 30.0% |
| TAACTTAAGAACTTGGCAAA+TGG | + | chr2_2:56030784-56030803 | None:intergenic | 30.0% | |
| ! | ATTGTGTTGTTGATAGATCA+TGG | - | chr2_2:56030803-56030822 | Msa0259170:CDS | 30.0% |
| !! | AATGTAGCTTGTTTGTATCA+TGG | - | chr2_2:56031047-56031066 | Msa0259170:CDS | 30.0% |
| ! | CATGTCAATGCTGAAATTTT+AGG | - | chr2_2:56031327-56031346 | Msa0259170:intron | 30.0% |
| !! | TTTTTGTTGTCTTTATTGCC+AGG | - | chr2_2:56031618-56031637 | Msa0259170:five_prime_UTR | 30.0% |
| !!! | TGGCCCAATGACTTTTTTTT+GGG | - | chr2_2:56029376-56029395 | Msa0259170:intron | 35.0% |
| AGAATGGCAACGTTTCTTTA+GGG | + | chr2_2:56029427-56029446 | None:intergenic | 35.0% | |
| AAGAATGGCAACGTTTCTTT+AGG | + | chr2_2:56029428-56029447 | None:intergenic | 35.0% | |
| CAGTGAATCATACAGTGAAT+TGG | + | chr2_2:56029631-56029650 | None:intergenic | 35.0% | |
| ! | TTTTCATTGACGAATGTGAG+AGG | - | chr2_2:56029831-56029850 | Msa0259170:intron | 35.0% |
| ATATAATCTGCCCGATTCAA+TGG | - | chr2_2:56030039-56030058 | Msa0259170:intron | 35.0% | |
| TCTTTATCTTTCTCCTCGTT+TGG | + | chr2_2:56030452-56030471 | None:intergenic | 35.0% | |
| !! | GTTTCTGAAGCAGATTCATT+GGG | + | chr2_2:56030603-56030622 | None:intergenic | 35.0% |
| !! | AGTTTCTGAAGCAGATTCAT+TGG | + | chr2_2:56030604-56030623 | None:intergenic | 35.0% |
| !! | GTCAATTCTGAAGTTGTAGT+TGG | - | chr2_2:56030920-56030939 | Msa0259170:CDS | 35.0% |
| !! | ATTCTGAAGTTGTAGTTGGT+TGG | - | chr2_2:56030924-56030943 | Msa0259170:CDS | 35.0% |
| CTGTGCTATATTAAGAAAGC+TGG | - | chr2_2:56031256-56031275 | Msa0259170:intron | 35.0% | |
| AATGTTTCAATCTAAGGGTG+AGG | + | chr2_2:56031295-56031314 | None:intergenic | 35.0% | |
| CAAATTACGGATGTAACAGA+AGG | + | chr2_2:56031410-56031429 | None:intergenic | 35.0% | |
| TTGTTAGATGGTAAGAAAGC+TGG | - | chr2_2:56031441-56031460 | Msa0259170:intron | 35.0% | |
| !!! | TGGCCCAATGACTTTTTTTT+GGG | - | chr2_2:56029376-56029395 | Msa0259170:intron | 35.0% |
| AGAATGGCAACGTTTCTTTA+GGG | + | chr2_2:56029427-56029446 | None:intergenic | 35.0% | |
| AAGAATGGCAACGTTTCTTT+AGG | + | chr2_2:56029428-56029447 | None:intergenic | 35.0% | |
| CAGTGAATCATACAGTGAAT+TGG | + | chr2_2:56029631-56029650 | None:intergenic | 35.0% | |
| ! | TTTTCATTGACGAATGTGAG+AGG | - | chr2_2:56029831-56029850 | Msa0259170:intron | 35.0% |
| ATATAATCTGCCCGATTCAA+TGG | - | chr2_2:56030039-56030058 | Msa0259170:intron | 35.0% | |
| TCTTTATCTTTCTCCTCGTT+TGG | + | chr2_2:56030452-56030471 | None:intergenic | 35.0% | |
| !! | GTTTCTGAAGCAGATTCATT+GGG | + | chr2_2:56030603-56030622 | None:intergenic | 35.0% |
| !! | AGTTTCTGAAGCAGATTCAT+TGG | + | chr2_2:56030604-56030623 | None:intergenic | 35.0% |
| !! | GTCAATTCTGAAGTTGTAGT+TGG | - | chr2_2:56030920-56030939 | Msa0259170:CDS | 35.0% |
| !! | ATTCTGAAGTTGTAGTTGGT+TGG | - | chr2_2:56030924-56030943 | Msa0259170:CDS | 35.0% |
| CTGTGCTATATTAAGAAAGC+TGG | - | chr2_2:56031256-56031275 | Msa0259170:intron | 35.0% | |
| AATGTTTCAATCTAAGGGTG+AGG | + | chr2_2:56031295-56031314 | None:intergenic | 35.0% | |
| CAAATTACGGATGTAACAGA+AGG | + | chr2_2:56031410-56031429 | None:intergenic | 35.0% | |
| TTGTTAGATGGTAAGAAAGC+TGG | - | chr2_2:56031441-56031460 | Msa0259170:intron | 35.0% | |
| CAAAAAAAAGTCATTGGGCC+AGG | + | chr2_2:56029377-56029396 | None:intergenic | 40.0% | |
| !!! | CTGGCCCAATGACTTTTTTT+TGG | - | chr2_2:56029375-56029394 | Msa0259170:intron | 40.0% |
| GAATCAAGTCAAGAAAGCTG+TGG | - | chr2_2:56029970-56029989 | Msa0259170:intron | 40.0% | |
| ! | ATGTCTTTTCACATCCCATC+AGG | + | chr2_2:56030000-56030019 | None:intergenic | 40.0% |
| TGATGGGATGTGAAAAGACA+TGG | - | chr2_2:56029999-56030018 | Msa0259170:intron | 40.0% | |
| AAAGACATGGCCTTCAATCA+AGG | - | chr2_2:56030012-56030031 | Msa0259170:intron | 40.0% | |
| TTTGGCCTCTTGAATGGAAT+AGG | + | chr2_2:56030119-56030138 | None:intergenic | 40.0% | |
| TTCCATTCAAGAGGCCAAAT+TGG | - | chr2_2:56030120-56030139 | Msa0259170:intron | 40.0% | |
| ATCCAATTTGGCCTCTTGAA+TGG | + | chr2_2:56030125-56030144 | None:intergenic | 40.0% | |
| ATGGCCTGAGAAATCCAATT+TGG | + | chr2_2:56030137-56030156 | None:intergenic | 40.0% | |
| TTTCTCCTCGTTTGGATTCA+CGG | + | chr2_2:56030444-56030463 | None:intergenic | 40.0% | |
| TTCTGATGAGACTGTGAAGA+AGG | - | chr2_2:56030472-56030491 | Msa0259170:intron | 40.0% | |
| TGAGACTGTGAAGAAGGTAA+TGG | - | chr2_2:56030478-56030497 | Msa0259170:CDS | 40.0% | |
| AGATTGACAAGGGAAAGAAG+AGG | - | chr2_2:56030577-56030596 | Msa0259170:intron | 40.0% | |
| ! | TTGTTGCAGTCAAGTTTTCC+TGG | + | chr2_2:56031639-56031658 | None:intergenic | 40.0% |
| TTGACTGCAACAACATAGCA+AGG | - | chr2_2:56031646-56031665 | Msa0259170:five_prime_UTR | 40.0% | |
| CAAAAAAAAGTCATTGGGCC+AGG | + | chr2_2:56029377-56029396 | None:intergenic | 40.0% | |
| !!! | CTGGCCCAATGACTTTTTTT+TGG | - | chr2_2:56029375-56029394 | Msa0259170:intron | 40.0% |
| GAATCAAGTCAAGAAAGCTG+TGG | - | chr2_2:56029970-56029989 | Msa0259170:intron | 40.0% | |
| ! | ATGTCTTTTCACATCCCATC+AGG | + | chr2_2:56030000-56030019 | None:intergenic | 40.0% |
| TGATGGGATGTGAAAAGACA+TGG | - | chr2_2:56029999-56030018 | Msa0259170:intron | 40.0% | |
| AAAGACATGGCCTTCAATCA+AGG | - | chr2_2:56030012-56030031 | Msa0259170:intron | 40.0% | |
| TTTGGCCTCTTGAATGGAAT+AGG | + | chr2_2:56030119-56030138 | None:intergenic | 40.0% | |
| TTCCATTCAAGAGGCCAAAT+TGG | - | chr2_2:56030120-56030139 | Msa0259170:intron | 40.0% | |
| ATCCAATTTGGCCTCTTGAA+TGG | + | chr2_2:56030125-56030144 | None:intergenic | 40.0% | |
| ATGGCCTGAGAAATCCAATT+TGG | + | chr2_2:56030137-56030156 | None:intergenic | 40.0% | |
| TTTCTCCTCGTTTGGATTCA+CGG | + | chr2_2:56030444-56030463 | None:intergenic | 40.0% | |
| TTCTGATGAGACTGTGAAGA+AGG | - | chr2_2:56030472-56030491 | Msa0259170:intron | 40.0% | |
| TGAGACTGTGAAGAAGGTAA+TGG | - | chr2_2:56030478-56030497 | Msa0259170:CDS | 40.0% | |
| AGATTGACAAGGGAAAGAAG+AGG | - | chr2_2:56030577-56030596 | Msa0259170:intron | 40.0% | |
| ! | TTGTTGCAGTCAAGTTTTCC+TGG | + | chr2_2:56031639-56031658 | None:intergenic | 40.0% |
| TTGACTGCAACAACATAGCA+AGG | - | chr2_2:56031646-56031665 | Msa0259170:five_prime_UTR | 40.0% | |
| !!! | GGTGGGTGTGAGTTTTAGAA+AGG | - | chr2_2:56029337-56029356 | Msa0259170:intron | 45.0% |
| AGTCATTGGGCCAGGTTATT+GGG | + | chr2_2:56029369-56029388 | None:intergenic | 45.0% | |
| AAGTCATTGGGCCAGGTTAT+TGG | + | chr2_2:56029370-56029389 | None:intergenic | 45.0% | |
| GGGTTTGAATACGAACCTAG+CGG | + | chr2_2:56029503-56029522 | None:intergenic | 45.0% | |
| ! | TGACGAATGTGAGAGGCTTT+TGG | - | chr2_2:56029838-56029857 | Msa0259170:intron | 45.0% |
| !! | GTGAGAGGCTTTTGGAGATA+AGG | - | chr2_2:56029846-56029865 | Msa0259170:intron | 45.0% |
| CATTGTGGTCATTTCAAGCC+AGG | + | chr2_2:56029933-56029952 | None:intergenic | 45.0% | |
| AAAGCTGTGGATGACCTGAT+GGG | - | chr2_2:56029983-56030002 | Msa0259170:intron | 45.0% | |
| !! | TGAAAACGCTCCTTGCTGTT+GGG | + | chr2_2:56030079-56030098 | None:intergenic | 45.0% |
| !! | AGCGTTTTCAGGAGATTGTG+AGG | - | chr2_2:56030089-56030108 | Msa0259170:intron | 45.0% |
| GCTGACCTATTCCATTCAAG+AGG | - | chr2_2:56030111-56030130 | Msa0259170:intron | 45.0% | |
| GAGGCCAAATTGGATTTCTC+AGG | - | chr2_2:56030130-56030149 | Msa0259170:intron | 45.0% | |
| ACCACTCTTGAGAAAACTGC+TGG | - | chr2_2:56030651-56030670 | Msa0259170:intron | 45.0% | |
| ! | ACCAGCAGTTTTCTCAAGAG+TGG | + | chr2_2:56030655-56030674 | None:intergenic | 45.0% |
| CAGTCTTTCCACCTTCCTTA+GGG | + | chr2_2:56031485-56031504 | None:intergenic | 45.0% | |
| TCAGTCTTTCCACCTTCCTT+AGG | + | chr2_2:56031486-56031505 | None:intergenic | 45.0% | |
| !!! | GGTGGGTGTGAGTTTTAGAA+AGG | - | chr2_2:56029337-56029356 | Msa0259170:intron | 45.0% |
| AGTCATTGGGCCAGGTTATT+GGG | + | chr2_2:56029369-56029388 | None:intergenic | 45.0% | |
| AAGTCATTGGGCCAGGTTAT+TGG | + | chr2_2:56029370-56029389 | None:intergenic | 45.0% | |
| GGGTTTGAATACGAACCTAG+CGG | + | chr2_2:56029503-56029522 | None:intergenic | 45.0% | |
| ! | TGACGAATGTGAGAGGCTTT+TGG | - | chr2_2:56029838-56029857 | Msa0259170:intron | 45.0% |
| !! | GTGAGAGGCTTTTGGAGATA+AGG | - | chr2_2:56029846-56029865 | Msa0259170:intron | 45.0% |
| CATTGTGGTCATTTCAAGCC+AGG | + | chr2_2:56029933-56029952 | None:intergenic | 45.0% | |
| AAAGCTGTGGATGACCTGAT+GGG | - | chr2_2:56029983-56030002 | Msa0259170:intron | 45.0% | |
| !! | TGAAAACGCTCCTTGCTGTT+GGG | + | chr2_2:56030079-56030098 | None:intergenic | 45.0% |
| !! | AGCGTTTTCAGGAGATTGTG+AGG | - | chr2_2:56030089-56030108 | Msa0259170:intron | 45.0% |
| GCTGACCTATTCCATTCAAG+AGG | - | chr2_2:56030111-56030130 | Msa0259170:intron | 45.0% | |
| GAGGCCAAATTGGATTTCTC+AGG | - | chr2_2:56030130-56030149 | Msa0259170:intron | 45.0% | |
| ACCACTCTTGAGAAAACTGC+TGG | - | chr2_2:56030651-56030670 | Msa0259170:intron | 45.0% | |
| ! | ACCAGCAGTTTTCTCAAGAG+TGG | + | chr2_2:56030655-56030674 | None:intergenic | 45.0% |
| CAGTCTTTCCACCTTCCTTA+GGG | + | chr2_2:56031485-56031504 | None:intergenic | 45.0% | |
| TCAGTCTTTCCACCTTCCTT+AGG | + | chr2_2:56031486-56031505 | None:intergenic | 45.0% | |
| !!! | AATTTTTATTTCATTTTTTA+TGG | - | chr2_2:56029671-56029690 | Msa0259170:intron | 5.0% |
| !!! | AATTTTTATTTCATTTTTTA+TGG | - | chr2_2:56029671-56029690 | Msa0259170:intron | 5.0% |
| AAGGTCAGACCCCAATAACC+TGG | - | chr2_2:56029356-56029375 | Msa0259170:intron | 50.0% | |
| GTCATTGGGCCAGGTTATTG+GGG | + | chr2_2:56029368-56029387 | None:intergenic | 50.0% | |
| GCGTATCATCTGTATGCTGC+CGG | - | chr2_2:56029881-56029900 | Msa0259170:intron | 50.0% | |
| GTTGTCTTCACCGGAACATC+CGG | + | chr2_2:56029903-56029922 | None:intergenic | 50.0% | |
| TGGTCATTTCAAGCCAGGAG+GGG | + | chr2_2:56029928-56029947 | None:intergenic | 50.0% | |
| GTGGTCATTTCAAGCCAGGA+GGG | + | chr2_2:56029929-56029948 | None:intergenic | 50.0% | |
| TGTGGTCATTTCAAGCCAGG+AGG | + | chr2_2:56029930-56029949 | None:intergenic | 50.0% | |
| GAAAGCTGTGGATGACCTGA+TGG | - | chr2_2:56029982-56030001 | Msa0259170:intron | 50.0% | |
| ! | CTGAAAACGCTCCTTGCTGT+TGG | + | chr2_2:56030080-56030099 | None:intergenic | 50.0% |
| !!! | CAACAGCAAGGAGCGTTTTC+AGG | - | chr2_2:56030078-56030097 | Msa0259170:intron | 50.0% |
| ! | TCAGAAGAGGCGATCCGTTT+TGG | - | chr2_2:56030167-56030186 | Msa0259170:intron | 50.0% |
| ! | CAGAAGAGGCGATCCGTTTT+GGG | - | chr2_2:56030168-56030187 | Msa0259170:intron | 50.0% |
| TTCTGCAGGTGCAGCATTCA+TGG | + | chr2_2:56030420-56030439 | None:intergenic | 50.0% | |
| TTTGGATTCACGGCTTCTGC+AGG | + | chr2_2:56030434-56030453 | None:intergenic | 50.0% | |
| AGAAGCCGTGAATCCAAACG+AGG | - | chr2_2:56030436-56030455 | Msa0259170:intron | 50.0% | |
| TACAGCAACTCCTCACCCTA+AGG | - | chr2_2:56031467-56031486 | Msa0259170:exon | 50.0% | |
| TTTCCACCTTCCTTAGGGTG+AGG | + | chr2_2:56031480-56031499 | None:intergenic | 50.0% | |
| GATGCCAAATCTCCCAAGTC+TGG | - | chr2_2:56031504-56031523 | Msa0259170:five_prime_UTR | 50.0% | |
| TCCTCCAGACTTGGGAGATT+TGG | + | chr2_2:56031511-56031530 | None:intergenic | 50.0% | |
| AAGGTCAGACCCCAATAACC+TGG | - | chr2_2:56029356-56029375 | Msa0259170:intron | 50.0% | |
| GTCATTGGGCCAGGTTATTG+GGG | + | chr2_2:56029368-56029387 | None:intergenic | 50.0% | |
| GCGTATCATCTGTATGCTGC+CGG | - | chr2_2:56029881-56029900 | Msa0259170:intron | 50.0% | |
| GTTGTCTTCACCGGAACATC+CGG | + | chr2_2:56029903-56029922 | None:intergenic | 50.0% | |
| TGGTCATTTCAAGCCAGGAG+GGG | + | chr2_2:56029928-56029947 | None:intergenic | 50.0% | |
| GTGGTCATTTCAAGCCAGGA+GGG | + | chr2_2:56029929-56029948 | None:intergenic | 50.0% | |
| TGTGGTCATTTCAAGCCAGG+AGG | + | chr2_2:56029930-56029949 | None:intergenic | 50.0% | |
| GAAAGCTGTGGATGACCTGA+TGG | - | chr2_2:56029982-56030001 | Msa0259170:intron | 50.0% | |
| ! | CTGAAAACGCTCCTTGCTGT+TGG | + | chr2_2:56030080-56030099 | None:intergenic | 50.0% |
| !!! | CAACAGCAAGGAGCGTTTTC+AGG | - | chr2_2:56030078-56030097 | Msa0259170:intron | 50.0% |
| ! | TCAGAAGAGGCGATCCGTTT+TGG | - | chr2_2:56030167-56030186 | Msa0259170:intron | 50.0% |
| ! | CAGAAGAGGCGATCCGTTTT+GGG | - | chr2_2:56030168-56030187 | Msa0259170:intron | 50.0% |
| TTCTGCAGGTGCAGCATTCA+TGG | + | chr2_2:56030420-56030439 | None:intergenic | 50.0% | |
| TTTGGATTCACGGCTTCTGC+AGG | + | chr2_2:56030434-56030453 | None:intergenic | 50.0% | |
| AGAAGCCGTGAATCCAAACG+AGG | - | chr2_2:56030436-56030455 | Msa0259170:intron | 50.0% | |
| TACAGCAACTCCTCACCCTA+AGG | - | chr2_2:56031467-56031486 | Msa0259170:exon | 50.0% | |
| TTTCCACCTTCCTTAGGGTG+AGG | + | chr2_2:56031480-56031499 | None:intergenic | 50.0% | |
| GATGCCAAATCTCCCAAGTC+TGG | - | chr2_2:56031504-56031523 | Msa0259170:five_prime_UTR | 50.0% | |
| TCCTCCAGACTTGGGAGATT+TGG | + | chr2_2:56031511-56031530 | None:intergenic | 50.0% | |
| CTGTATGCTGCCGGATGTTC+CGG | - | chr2_2:56029890-56029909 | Msa0259170:intron | 55.0% | |
| TCATTTCAAGCCAGGAGGGG+GGG | + | chr2_2:56029925-56029944 | None:intergenic | 55.0% | |
| GTCATTTCAAGCCAGGAGGG+GGG | + | chr2_2:56029926-56029945 | None:intergenic | 55.0% | |
| GGTCATTTCAAGCCAGGAGG+GGG | + | chr2_2:56029927-56029946 | None:intergenic | 55.0% | |
| CTATGTTCCGCCCAACAGCA+AGG | - | chr2_2:56030066-56030085 | Msa0259170:intron | 55.0% | |
| !! | AAACGCTCCTTGCTGTTGGG+CGG | + | chr2_2:56030076-56030095 | None:intergenic | 55.0% |
| CTCTTCTGAGCGCAAGCTGA+TGG | + | chr2_2:56030156-56030175 | None:intergenic | 55.0% | |
| CATCAGCTTGCGCTCAGAAG+AGG | - | chr2_2:56030154-56030173 | Msa0259170:intron | 55.0% | |
| CGTACACGTGCAGCATAGCT+AGG | + | chr2_2:56030389-56030408 | None:intergenic | 55.0% | |
| GCAACTCCTCACCCTAAGGA+AGG | - | chr2_2:56031471-56031490 | Msa0259170:exon | 55.0% | |
| ACTCCTCACCCTAAGGAAGG+TGG | - | chr2_2:56031474-56031493 | Msa0259170:exon | 55.0% | |
| GCCAAATCTCCCAAGTCTGG+AGG | - | chr2_2:56031507-56031526 | Msa0259170:five_prime_UTR | 55.0% | |
| ATCTCCCAAGTCTGGAGGAC+AGG | - | chr2_2:56031512-56031531 | Msa0259170:five_prime_UTR | 55.0% | |
| CTGTCCTGTCCTCCAGACTT+GGG | + | chr2_2:56031519-56031538 | None:intergenic | 55.0% | |
| ACTGTCCTGTCCTCCAGACT+TGG | + | chr2_2:56031520-56031539 | None:intergenic | 55.0% | |
| CTGTATGCTGCCGGATGTTC+CGG | - | chr2_2:56029890-56029909 | Msa0259170:intron | 55.0% | |
| TCATTTCAAGCCAGGAGGGG+GGG | + | chr2_2:56029925-56029944 | None:intergenic | 55.0% | |
| GTCATTTCAAGCCAGGAGGG+GGG | + | chr2_2:56029926-56029945 | None:intergenic | 55.0% | |
| GGTCATTTCAAGCCAGGAGG+GGG | + | chr2_2:56029927-56029946 | None:intergenic | 55.0% | |
| CTATGTTCCGCCCAACAGCA+AGG | - | chr2_2:56030066-56030085 | Msa0259170:intron | 55.0% | |
| !! | AAACGCTCCTTGCTGTTGGG+CGG | + | chr2_2:56030076-56030095 | None:intergenic | 55.0% |
| CTCTTCTGAGCGCAAGCTGA+TGG | + | chr2_2:56030156-56030175 | None:intergenic | 55.0% | |
| CATCAGCTTGCGCTCAGAAG+AGG | - | chr2_2:56030154-56030173 | Msa0259170:intron | 55.0% | |
| CGTACACGTGCAGCATAGCT+AGG | + | chr2_2:56030389-56030408 | None:intergenic | 55.0% | |
| GCAACTCCTCACCCTAAGGA+AGG | - | chr2_2:56031471-56031490 | Msa0259170:exon | 55.0% | |
| ACTCCTCACCCTAAGGAAGG+TGG | - | chr2_2:56031474-56031493 | Msa0259170:exon | 55.0% | |
| GCCAAATCTCCCAAGTCTGG+AGG | - | chr2_2:56031507-56031526 | Msa0259170:five_prime_UTR | 55.0% | |
| ATCTCCCAAGTCTGGAGGAC+AGG | - | chr2_2:56031512-56031531 | Msa0259170:five_prime_UTR | 55.0% | |
| CTGTCCTGTCCTCCAGACTT+GGG | + | chr2_2:56031519-56031538 | None:intergenic | 55.0% | |
| ACTGTCCTGTCCTCCAGACT+TGG | + | chr2_2:56031520-56031539 | None:intergenic | 55.0% | |
| CCATGACGCTTCCGCTGGAA+TGG | + | chr2_2:56029475-56029494 | None:intergenic | 60.0% | |
| !! | CCATTCCAGCGGAAGCGTCA+TGG | - | chr2_2:56029472-56029491 | Msa0259170:CDS | 60.0% |
| TGTTGCCATGACGCTTCCGC+TGG | + | chr2_2:56029480-56029499 | None:intergenic | 60.0% | |
| AGCGTCATGGCAACACCGCT+AGG | - | chr2_2:56029485-56029504 | Msa0259170:CDS | 60.0% | |
| CCATGACGCTTCCGCTGGAA+TGG | + | chr2_2:56029475-56029494 | None:intergenic | 60.0% | |
| !! | CCATTCCAGCGGAAGCGTCA+TGG | - | chr2_2:56029472-56029491 | Msa0259170:CDS | 60.0% |
| TGTTGCCATGACGCTTCCGC+TGG | + | chr2_2:56029480-56029499 | None:intergenic | 60.0% | |
| AGCGTCATGGCAACACCGCT+AGG | - | chr2_2:56029485-56029504 | Msa0259170:CDS | 60.0% | |
| GGAGGGGGGGTTGTCTTCAC+CGG | + | chr2_2:56029912-56029931 | None:intergenic | 65.0% | |
| GTGAAGACAACCCCCCCTCC+TGG | - | chr2_2:56029912-56029931 | Msa0259170:intron | 65.0% | |
| GGAGGGGGGGTTGTCTTCAC+CGG | + | chr2_2:56029912-56029931 | None:intergenic | 65.0% | |
| GTGAAGACAACCCCCCCTCC+TGG | - | chr2_2:56029912-56029931 | Msa0259170:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 56029285 | 56031686 | 56029285 | ID=Msa0259170;Name=Msa0259170 |
| chr2_2 | mRNA | 56029285 | 56031686 | 56029285 | ID=Msa0259170-mRNA-1;Parent=Msa0259170;Name=Msa0259170-mRNA-1;_AED=0.19;_eAED=0.19;_QI=206|0.33|0.14|0.57|0.83|0.57|7|0|242 |
| chr2_2 | exon | 56029285 | 56029331 | 56029285 | ID=Msa0259170-mRNA-1:exon:16929;Parent=Msa0259170-mRNA-1 |
| chr2_2 | exon | 56029434 | 56029523 | 56029434 | ID=Msa0259170-mRNA-1:exon:16928;Parent=Msa0259170-mRNA-1 |
| chr2_2 | exon | 56030299 | 56030392 | 56030299 | ID=Msa0259170-mRNA-1:exon:16927;Parent=Msa0259170-mRNA-1 |
| chr2_2 | exon | 56030478 | 56030588 | 56030478 | ID=Msa0259170-mRNA-1:exon:16926;Parent=Msa0259170-mRNA-1 |
| chr2_2 | exon | 56030782 | 56030988 | 56030782 | ID=Msa0259170-mRNA-1:exon:16925;Parent=Msa0259170-mRNA-1 |
| chr2_2 | exon | 56030995 | 56031155 | 56030995 | ID=Msa0259170-mRNA-1:exon:16924;Parent=Msa0259170-mRNA-1 |
| chr2_2 | exon | 56031465 | 56031686 | 56031465 | ID=Msa0259170-mRNA-1:exon:16923;Parent=Msa0259170-mRNA-1 |
| chr2_2 | five_prime_UTR | 56031481 | 56031686 | 56031481 | ID=Msa0259170-mRNA-1:five_prime_utr;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56031465 | 56031480 | 56031465 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56030995 | 56031155 | 56030995 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56030782 | 56030988 | 56030782 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56030478 | 56030588 | 56030478 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56030299 | 56030392 | 56030299 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56029434 | 56029523 | 56029434 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| chr2_2 | CDS | 56029285 | 56029331 | 56029285 | ID=Msa0259170-mRNA-1:cds;Parent=Msa0259170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
