Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259160 | RHN75408.1 | 72.603 | 73 | 12 | 3 | 188 | 252 | 86 | 158 | 7.07e-20 | 94.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259160 | sp|Q8LJS2|HDT1_SOYBN | 60.274 | 73 | 21 | 3 | 189 | 253 | 203 | 275 | 1.25e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259160 | A0A396JGD3 | 72.603 | 73 | 12 | 3 | 188 | 252 | 86 | 158 | 3.38e-20 | 94.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0259160 | 0.805097 | 1.573792e-49 | -8.615850e-47 |
| Msa0030280 | Msa0259160 | 0.802394 | 5.727960e-49 | -8.615850e-47 |
| Msa0033880 | Msa0259160 | 0.812855 | 3.437011e-51 | -8.615850e-47 |
| Msa0039250 | Msa0259160 | 0.803261 | 3.793142e-49 | -8.615850e-47 |
| Msa0047280 | Msa0259160 | 0.802202 | 6.273306e-49 | -8.615850e-47 |
| Msa0053240 | Msa0259160 | 0.801862 | 7.368786e-49 | -8.615850e-47 |
| Msa0070430 | Msa0259160 | 0.807264 | 5.503708e-50 | -8.615850e-47 |
| Msa0097850 | Msa0259160 | 0.802585 | 5.231109e-49 | -8.615850e-47 |
| Msa0100800 | Msa0259160 | 0.800700 | 1.274424e-48 | -8.615850e-47 |
| Msa0101180 | Msa0259160 | 0.811225 | 7.785407e-51 | -8.615850e-47 |
| Msa0108870 | Msa0259160 | 0.801155 | 1.028818e-48 | -8.615850e-47 |
| Msa0126770 | Msa0259160 | 0.821558 | 3.787070e-53 | -8.615850e-47 |
| Msa0127850 | Msa0259160 | 0.802742 | 4.855568e-49 | -8.615850e-47 |
| Msa0139990 | Msa0259160 | 0.800545 | 1.370860e-48 | -8.615850e-47 |
| Msa0147980 | Msa0259160 | 0.802631 | 5.118282e-49 | -8.615850e-47 |
| Msa0165950 | Msa0259160 | 0.800315 | 1.526528e-48 | -8.615850e-47 |
| Msa0171850 | Msa0259160 | 0.811069 | 8.419294e-51 | -8.615850e-47 |
| Msa0174000 | Msa0259160 | 0.809261 | 2.064904e-50 | -8.615850e-47 |
| Msa0180020 | Msa0259160 | 0.814213 | 1.727929e-51 | -8.615850e-47 |
| Msa0180790 | Msa0259160 | -0.805306 | 1.422915e-49 | -8.615850e-47 |
| Msa0183460 | Msa0259160 | 0.829518 | 4.922685e-55 | -8.615850e-47 |
| Msa0183870 | Msa0259160 | 0.808610 | 2.846354e-50 | -8.615850e-47 |
| Msa0186310 | Msa0259160 | 0.822452 | 2.351106e-53 | -8.615850e-47 |
| Msa0188890 | Msa0259160 | 0.801563 | 8.487986e-49 | -8.615850e-47 |
| Msa0193600 | Msa0259160 | 0.825125 | 5.558347e-54 | -8.615850e-47 |
| Msa0226460 | Msa0259160 | 0.817780 | 2.761310e-52 | -8.615850e-47 |
| Msa0242680 | Msa0259160 | 0.809176 | 2.153805e-50 | -8.615850e-47 |
| Msa0259160 | Msa0259170 | 0.851234 | 1.013229e-60 | -8.615850e-47 |
| Msa0259160 | Msa0259230 | 0.853600 | 2.147209e-61 | -8.615850e-47 |
| Msa0259160 | Msa0262480 | 0.811270 | 7.613814e-51 | -8.615850e-47 |
| Msa0259160 | Msa0273650 | 0.824154 | 9.413782e-54 | -8.615850e-47 |
| Msa0259160 | Msa0296250 | 0.808096 | 3.663037e-50 | -8.615850e-47 |
| Msa0259160 | Msa0299730 | 0.811784 | 5.888025e-51 | -8.615850e-47 |
| Msa0259160 | Msa0306710 | 0.809930 | 1.483227e-50 | -8.615850e-47 |
| Msa0259160 | Msa0310410 | 0.810964 | 8.869946e-51 | -8.615850e-47 |
| Msa0259160 | Msa0320590 | 0.815840 | 7.522074e-52 | -8.615850e-47 |
| Msa0259160 | Msa0335320 | -0.823770 | 1.158145e-53 | -8.615850e-47 |
| Msa0259160 | Msa0336300 | 0.852862 | 3.494967e-61 | -8.615850e-47 |
| Msa0259160 | Msa0337510 | 0.806064 | 9.861780e-50 | -8.615850e-47 |
| Msa0259160 | Msa0343190 | 0.801251 | 9.835079e-49 | -8.615850e-47 |
| Msa0259160 | Msa0346990 | 0.803515 | 3.360336e-49 | -8.615850e-47 |
| Msa0259160 | Msa0387880 | -0.804357 | 2.245503e-49 | -8.615850e-47 |
| Msa0259160 | Msa0392200 | 0.806882 | 6.627145e-50 | -8.615850e-47 |
| Msa0259160 | Msa0392940 | 0.806158 | 9.420709e-50 | -8.615850e-47 |
| Msa0259160 | Msa0419520 | 0.821476 | 3.957688e-53 | -8.615850e-47 |
| Msa0259160 | Msa0431770 | 0.828766 | 7.488371e-55 | -8.615850e-47 |
| Msa0259160 | Msa0439890 | 0.803976 | 2.695470e-49 | -8.615850e-47 |
| Msa0259160 | Msa0442310 | 0.807148 | 5.824054e-50 | -8.615850e-47 |
| Msa0259160 | Msa0455380 | 0.808972 | 2.381397e-50 | -8.615850e-47 |
| Msa0259160 | Msa0465550 | 0.811937 | 5.453345e-51 | -8.615850e-47 |
| Msa0259160 | Msa0484290 | 0.810243 | 1.270121e-50 | -8.615850e-47 |
| Msa0259160 | Msa0510290 | 0.813096 | 3.043485e-51 | -8.615850e-47 |
| Msa0259160 | Msa0547990 | 0.809700 | 1.662502e-50 | -8.615850e-47 |
| Msa0259160 | Msa0550570 | 0.807064 | 6.065232e-50 | -8.615850e-47 |
| Msa0259160 | Msa0567240 | 0.808339 | 3.251014e-50 | -8.615850e-47 |
| Msa0259160 | Msa0571920 | 0.808749 | 2.658282e-50 | -8.615850e-47 |
| Msa0259160 | Msa0593700 | 0.808412 | 3.136632e-50 | -8.615850e-47 |
| Msa0259160 | Msa0609000 | 0.837351 | 5.471388e-57 | -8.615850e-47 |
| Msa0259160 | Msa0610390 | 0.823390 | 1.421149e-53 | -8.615850e-47 |
| Msa0259160 | Msa0614510 | 0.805533 | 1.275305e-49 | -8.615850e-47 |
| Msa0259160 | Msa0620990 | 0.809786 | 1.592665e-50 | -8.615850e-47 |
| Msa0259160 | Msa0644030 | 0.816857 | 4.454114e-52 | -8.615850e-47 |
| Msa0259160 | Msa0648940 | 0.806225 | 9.122795e-50 | -8.615850e-47 |
| Msa0259160 | Msa0650920 | 0.807385 | 5.187831e-50 | -8.615850e-47 |
| Msa0259160 | Msa0654870 | 0.818511 | 1.887245e-52 | -8.615850e-47 |
| Msa0259160 | Msa0659140 | 0.811455 | 6.941797e-51 | -8.615850e-47 |
| Msa0259160 | Msa0666230 | 0.805879 | 1.078472e-49 | -8.615850e-47 |
| Msa0259160 | Msa0677770 | 0.803290 | 3.741571e-49 | -8.615850e-47 |
| Msa0259160 | Msa0687230 | 0.842473 | 2.531310e-58 | -8.615850e-47 |
| Msa0259160 | Msa0691690 | 0.800912 | 1.153476e-48 | -8.615850e-47 |
| Msa0259160 | Msa0694990 | 0.817362 | 3.430065e-52 | -8.615850e-47 |
| Msa0259160 | Msa0704800 | 0.828866 | 7.082749e-55 | -8.615850e-47 |
| Msa0259160 | Msa0705600 | 0.819316 | 1.238227e-52 | -8.615850e-47 |
| Msa0259160 | Msa0706390 | 0.802926 | 4.449702e-49 | -8.615850e-47 |
| Msa0259160 | Msa0707390 | 0.813502 | 2.477785e-51 | -8.615850e-47 |
| Msa0259160 | Msa0734960 | 0.801112 | 1.049716e-48 | -8.615850e-47 |
| Msa0259160 | Msa0735310 | 0.827262 | 1.724240e-54 | -8.615850e-47 |
| Msa0259160 | Msa0742510 | 0.839680 | 1.370889e-57 | -8.615850e-47 |
| Msa0259160 | Msa0744090 | 0.808357 | 3.222219e-50 | -8.615850e-47 |
| Msa0259160 | Msa0750920 | 0.812521 | 4.066884e-51 | -8.615850e-47 |
| Msa0259160 | Msa0755150 | 0.802017 | 6.849538e-49 | -8.615850e-47 |
| Msa0259160 | Msa0756930 | 0.830144 | 3.465404e-55 | -8.615850e-47 |
| Msa0259160 | Msa0774750 | 0.815413 | 9.365158e-52 | -8.615850e-47 |
| Msa0259160 | Msa0779550 | 0.836064 | 1.164614e-56 | -8.615850e-47 |
| Msa0259160 | Msa0781270 | 0.808527 | 2.964688e-50 | -8.615850e-47 |
| Msa0259160 | Msa0785130 | 0.801749 | 7.773695e-49 | -8.615850e-47 |
| Msa0259160 | Msa0790610 | 0.801279 | 9.705949e-49 | -8.615850e-47 |
| Msa0259160 | Msa0794050 | 0.803550 | 3.303956e-49 | -8.615850e-47 |
| Msa0259160 | Msa0795660 | 0.812727 | 3.664513e-51 | -8.615850e-47 |
| Msa0259160 | Msa0805500 | 0.823286 | 1.503178e-53 | -8.615850e-47 |
| Msa0259160 | Msa0818170 | 0.803104 | 4.088409e-49 | -8.615850e-47 |
| Msa0259160 | Msa0818770 | 0.828841 | 7.184098e-55 | -8.615850e-47 |
| Msa0259160 | Msa0824640 | 0.819435 | 1.163386e-52 | -8.615850e-47 |
| Msa0259160 | Msa0825280 | 0.809632 | 1.719023e-50 | -8.615850e-47 |
| Msa0259160 | Msa0832820 | 0.802998 | 4.299251e-49 | -8.615850e-47 |
| Msa0259160 | Msa0836500 | 0.804067 | 2.581160e-49 | -8.615850e-47 |
| Msa0259160 | Msa0851470 | 0.800483 | 1.410867e-48 | -8.615850e-47 |
| Msa0259160 | Msa0862650 | 0.803121 | 4.054593e-49 | -8.615850e-47 |
| Msa0259160 | Msa0864010 | 0.815231 | 1.027725e-51 | -8.615850e-47 |
| Msa0259160 | Msa0888940 | 0.823873 | 1.095381e-53 | -8.615850e-47 |
| Msa0259160 | Msa0895310 | 0.815964 | 7.059113e-52 | -8.615850e-47 |
| Msa0259160 | Msa0928120 | 0.805762 | 1.141434e-49 | -8.615850e-47 |
| Msa0259160 | Msa0943170 | 0.807534 | 4.823311e-50 | -8.615850e-47 |
| Msa0259160 | Msa0947530 | -0.830775 | 2.429024e-55 | -8.615850e-47 |
| Msa0259160 | Msa0955190 | 0.823192 | 1.580975e-53 | -8.615850e-47 |
| Msa0259160 | Msa0957450 | -0.817658 | 2.942173e-52 | -8.615850e-47 |
| Msa0259160 | Msa0959840 | 0.803830 | 2.890782e-49 | -8.615850e-47 |
| Msa0259160 | Msa0960830 | 0.833696 | 4.596916e-56 | -8.615850e-47 |
| Msa0259160 | Msa0963020 | 0.823078 | 1.680768e-53 | -8.615850e-47 |
| Msa0259160 | Msa0973320 | 0.824754 | 6.799794e-54 | -8.615850e-47 |
| Msa0259160 | Msa0979810 | 0.823278 | 1.509584e-53 | -8.615850e-47 |
| Msa0259160 | Msa0980940 | 0.820112 | 8.148331e-53 | -8.615850e-47 |
| Msa0259160 | Msa1000930 | 0.805256 | 1.457228e-49 | -8.615850e-47 |
| Msa0259160 | Msa1011510 | 0.801500 | 8.744742e-49 | -8.615850e-47 |
| Msa0259160 | Msa1019240 | 0.800643 | 1.309192e-48 | -8.615850e-47 |
| Msa0259160 | Msa1023170 | -0.807094 | 5.978063e-50 | -8.615850e-47 |
| Msa0259160 | Msa1025940 | 0.821317 | 4.305986e-53 | -8.615850e-47 |
| Msa0259160 | Msa1029970 | 0.817575 | 3.071492e-52 | -8.615850e-47 |
| Msa0259160 | Msa1030930 | 0.825850 | 3.742613e-54 | -8.615850e-47 |
| Msa0259160 | Msa1033970 | 0.819040 | 1.431184e-52 | -8.615850e-47 |
| Msa0259160 | Msa1069820 | 0.808689 | 2.737822e-50 | -8.615850e-47 |
| Msa0259160 | Msa1070050 | 0.816094 | 6.600505e-52 | -8.615850e-47 |
| Msa0259160 | Msa1070390 | 0.826698 | 2.351661e-54 | -8.615850e-47 |
| Msa0259160 | Msa1073830 | 0.818370 | 2.030561e-52 | -8.615850e-47 |
| Msa0259160 | Msa1083880 | 0.803293 | 3.735426e-49 | -8.615850e-47 |
| Msa0259160 | Msa1087510 | -0.812770 | 3.585951e-51 | -8.615850e-47 |
| Msa0259160 | Msa1111700 | 0.813384 | 2.629979e-51 | -8.615850e-47 |
| Msa0259160 | Msa1123350 | 0.802686 | 4.986725e-49 | -8.615850e-47 |
| Msa0259160 | Msa1126850 | 0.815665 | 8.227880e-52 | -8.615850e-47 |
| Msa0259160 | Msa1128990 | 0.829425 | 5.185026e-55 | -8.615850e-47 |
| Msa0259160 | Msa1131170 | 0.805260 | 1.454759e-49 | -8.615850e-47 |
| Msa0259160 | Msa1131560 | 0.813927 | 1.998035e-51 | -8.615850e-47 |
| Msa0259160 | Msa1154490 | 0.801894 | 7.257545e-49 | -8.615850e-47 |
| Msa0259160 | Msa1158230 | 0.805608 | 1.229799e-49 | -8.615850e-47 |
| Msa0259160 | Msa1166870 | 0.809759 | 1.614121e-50 | -8.615850e-47 |
| Msa0259160 | Msa1174100 | 0.800631 | 1.316669e-48 | -8.615850e-47 |
| Msa0259160 | Msa1176980 | 0.812861 | 3.425980e-51 | -8.615850e-47 |
| Msa0259160 | Msa1183660 | 0.804194 | 2.428241e-49 | -8.615850e-47 |
| Msa0259160 | Msa1184370 | 0.803600 | 3.227031e-49 | -8.615850e-47 |
| Msa0259160 | Msa1186530 | 0.842325 | 2.771290e-58 | -8.615850e-47 |
| Msa0259160 | Msa1188560 | 0.819676 | 1.025067e-52 | -8.615850e-47 |
| Msa0259160 | Msa1190970 | 0.800406 | 1.463279e-48 | -8.615850e-47 |
| Msa0259160 | Msa1192850 | 0.840067 | 1.086603e-57 | -8.615850e-47 |
| Msa0259160 | Msa1198530 | 0.801350 | 9.386607e-49 | -8.615850e-47 |
| Msa0259160 | Msa1199290 | 0.812884 | 3.387242e-51 | -8.615850e-47 |
| Msa0259160 | Msa1199710 | 0.817911 | 2.578788e-52 | -8.615850e-47 |
| Msa0259160 | Msa1201810 | 0.848924 | 4.495111e-60 | -8.615850e-47 |
| Msa0259160 | Msa1201830 | 0.819230 | 1.295047e-52 | -8.615850e-47 |
| Msa0259160 | Msa1211050 | -0.824920 | 6.214548e-54 | -8.615850e-47 |
| Msa0259160 | Msa1227690 | 0.812508 | 4.093061e-51 | -8.615850e-47 |
| Msa0259160 | Msa1253400 | 0.811523 | 6.708565e-51 | -8.615850e-47 |
| Msa0259160 | Msa1253810 | 0.812623 | 3.861929e-51 | -8.615850e-47 |
| Msa0259160 | Msa1270620 | 0.800742 | 1.249451e-48 | -8.615850e-47 |
| Msa0259160 | Msa1275070 | 0.811541 | 6.648394e-51 | -8.615850e-47 |
| Msa0259160 | Msa1294840 | 0.813001 | 3.191924e-51 | -8.615850e-47 |
| Msa0259160 | Msa1296300 | 0.823825 | 1.124424e-53 | -8.615850e-47 |
| Msa0259160 | Msa1323990 | 0.827537 | 1.481138e-54 | -8.615850e-47 |
| Msa0259160 | Msa1327490 | 0.835874 | 1.301307e-56 | -8.615850e-47 |
| Msa0259160 | Msa1329450 | 0.809909 | 1.498740e-50 | -8.615850e-47 |
| Msa0259160 | Msa1343290 | 0.807723 | 4.398287e-50 | -8.615850e-47 |
| Msa0259160 | Msa1372310 | 0.804719 | 1.887165e-49 | -8.615850e-47 |
| Msa0259160 | Msa1380970 | 0.814406 | 1.565955e-51 | -8.615850e-47 |
| Msa0259160 | Msa1390680 | 0.852393 | 4.755178e-61 | -8.615850e-47 |
| Msa0259160 | Msa1392890 | 0.852307 | 5.029963e-61 | -8.615850e-47 |
| Msa0259160 | Msa1397940 | 0.816993 | 4.151387e-52 | -8.615850e-47 |
| Msa0259160 | Msa1423910 | 0.806622 | 7.520804e-50 | -8.615850e-47 |
| Msa0259160 | Msa1438050 | 0.821802 | 3.326528e-53 | -8.615850e-47 |
| Msa0259160 | Msa1438640 | 0.806356 | 8.559429e-50 | -8.615850e-47 |
| Msa0259160 | Msa1461490 | 0.818044 | 2.407436e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0259160 | MtrunA17_Chr2g0320884 | 72.603 | 73 | 12 | 3 | 188 | 252 | 238 | 310 | 2.13e-23 | 96.7 |
| Msa0259160 | MtrunA17_Chr2g0322011 | 76.190 | 42 | 8 | 1 | 160 | 199 | 17 | 58 | 2.37e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCCAGACTTGGGAGATT+TGG | 0.246379 | 2_2:+56018501 | None:intergenic |
| CCATGGCATGTTTAGCCTTC+AGG | 0.278877 | 2_2:+56019702 | None:intergenic |
| TCTTCATCTTTCTCCTCGTT+TGG | 0.289702 | 2_2:+56019548 | None:intergenic |
| TCAGTCTTTCCACCTTCCTT+AGG | 0.293756 | 2_2:+56018526 | None:intergenic |
| AATCTAAACACAATGAATTT+AGG | 0.299808 | 2_2:+56018152 | None:intergenic |
| TTATGCTGTTTGAGCTATAT+AGG | 0.310620 | 2_2:-56018097 | Msa0259160:three_prime_UTR |
| TTCTGCAGGTGCAGCATTCA+TGG | 0.329326 | 2_2:+56019589 | None:intergenic |
| AGTTGTGGTATGACATGATT+TGG | 0.360649 | 2_2:-56018207 | Msa0259160:three_prime_UTR |
| TGCCATGGCTTCCGCTGAAA+TGG | 0.377967 | 2_2:+56020852 | None:intergenic |
| GTAGTATGGTGAGTATTCTA+AGG | 0.381259 | 2_2:-56018277 | Msa0259160:three_prime_UTR |
| GTTCTTGAAATGATGGATCT+TGG | 0.386844 | 2_2:-56020267 | Msa0259160:CDS |
| TTTAGCACTGACGGGAGCTT+TGG | 0.391957 | 2_2:-56020166 | Msa0259160:CDS |
| GTGAGTATTCTAAGGATGTT+AGG | 0.404376 | 2_2:-56018269 | Msa0259160:three_prime_UTR |
| CAGTCTTTCCACCTTCCTTA+GGG | 0.410326 | 2_2:+56018527 | None:intergenic |
| ACGAGCTTTATCAGAAGATT+AGG | 0.413583 | 2_2:-56020137 | Msa0259160:intron |
| TGGAAGCTATTTGACTTTGA+TGG | 0.416909 | 2_2:-56018187 | Msa0259160:three_prime_UTR |
| AATGAAAACAGCCTTGTCAT+TGG | 0.425093 | 2_2:+56020194 | None:intergenic |
| GTTTCTGCAGCAGATTCATT+AGG | 0.439807 | 2_2:+56019397 | None:intergenic |
| GAGGATTGTTCTTGAAATGA+TGG | 0.442370 | 2_2:-56020274 | Msa0259160:CDS |
| TTCGTCAATGTACAGCTGTT+GGG | 0.442872 | 2_2:+56020302 | None:intergenic |
| GATGCCAAATCTCCCAAGTC+TGG | 0.449028 | 2_2:-56018505 | Msa0259160:CDS |
| TTGTTAGATGGTAAGAAAGC+TGG | 0.456417 | 2_2:-56018568 | Msa0259160:intron |
| CTTCGTCAATGTACAGCTGT+TGG | 0.459677 | 2_2:+56020301 | None:intergenic |
| ATCTCCCAAGTCTGGAGGAC+AGG | 0.468232 | 2_2:-56018497 | Msa0259160:CDS |
| ACTGTCCTGTCCTCCAGACT+TGG | 0.471440 | 2_2:+56018492 | None:intergenic |
| AAATGATGGATCTTGGAGGC+TGG | 0.479023 | 2_2:-56020260 | Msa0259160:CDS |
| TTTATTAATGTTTAGGCTTG+AGG | 0.483159 | 2_2:-56019735 | Msa0259160:intron |
| ACTTCACTTAGCAGCATGCT+TGG | 0.492494 | 2_2:+56018340 | None:intergenic |
| ACGTGCACGTGGACGTGAGC+TGG | 0.497525 | 2_2:-56019648 | Msa0259160:CDS |
| TTCTGATGAGACTGTGAAGA+AGG | 0.500279 | 2_2:-56019525 | Msa0259160:intron |
| ACAACCTTCACTTCTTCTGC+AGG | 0.504350 | 2_2:+56019575 | None:intergenic |
| GGAAGCTATTTGACTTTGAT+GGG | 0.505710 | 2_2:-56018186 | Msa0259160:three_prime_UTR |
| TCTTGGAGGCTGGGATGCTA+TGG | 0.515882 | 2_2:-56020250 | Msa0259160:CDS |
| TTTCCACCTTCCTTAGGGTG+AGG | 0.518153 | 2_2:+56018532 | None:intergenic |
| AAAACCGATCCTGAGAAAAC+CGG | 0.531933 | 2_2:-56019358 | Msa0259160:intron |
| ACGTGCACGTTCAGCCTCCA+TGG | 0.532243 | 2_2:+56019685 | None:intergenic |
| CTTGAAATGATGGATCTTGG+AGG | 0.537283 | 2_2:-56020264 | Msa0259160:CDS |
| ACGTGCAAGTGCAGCCTCCA+TGG | 0.541146 | 2_2:+56019613 | None:intergenic |
| GGCTGAACGTGCACGTGACA+TGG | 0.544596 | 2_2:-56019678 | Msa0259160:CDS |
| TTCCATTTCAGCGGAAGCCA+TGG | 0.550292 | 2_2:-56020854 | Msa0259160:exon |
| TGCTCCACTTGAAGATGCCA+TGG | 0.552042 | 2_2:+56020837 | None:intergenic |
| GACTGGACTCGAAGAGGACA+AGG | 0.563356 | 2_2:-56020370 | Msa0259160:CDS |
| GCACTGACGGGAGCTTTGGA+AGG | 0.570184 | 2_2:-56020162 | Msa0259160:CDS |
| CTGTCCTGTCCTCCAGACTT+GGG | 0.571955 | 2_2:+56018493 | None:intergenic |
| AATGATGGATCTTGGAGGCT+GGG | 0.575002 | 2_2:-56020259 | Msa0259160:CDS |
| GCATCTTCAAGTGGAGCAGT+AGG | 0.581947 | 2_2:-56020832 | Msa0259160:intron |
| TGAGGCTGATCGTGACCTGA+AGG | 0.582410 | 2_2:-56019717 | Msa0259160:CDS |
| CCTGAAGGCTAAACATGCCA+TGG | 0.583814 | 2_2:-56019702 | Msa0259160:CDS |
| TACAGCAATTCCTCACCCTA+AGG | 0.585173 | 2_2:-56018542 | Msa0259160:CDS |
| GCTGGAGGCTAAACGTGCCA+TGG | 0.595058 | 2_2:-56019630 | Msa0259160:CDS |
| TCGTTTGATAAATCTTCTTG+AGG | 0.607052 | 2_2:-56020415 | Msa0259160:CDS |
| ATTCCTCACCCTAAGGAAGG+TGG | 0.612537 | 2_2:-56018535 | Msa0259160:CDS |
| TTGACTGCAACAACATAGCA+AGG | 0.626889 | 2_2:-56018363 | Msa0259160:exon |
| GCAATTCCTCACCCTAAGGA+AGG | 0.627632 | 2_2:-56018538 | Msa0259160:CDS |
| GAAGCCATGGCATCTTCAAG+TGG | 0.639878 | 2_2:-56020841 | Msa0259160:exon |
| GCCAAATCTCCCAAGTCTGG+AGG | 0.652249 | 2_2:-56018502 | Msa0259160:CDS |
| TTGCTTAGTGAATACTATCG+AGG | 0.654655 | 2_2:-56020457 | Msa0259160:intron |
| TGCACGTGGACGTGAGCTGG+AGG | 0.658184 | 2_2:-56019645 | Msa0259160:CDS |
| ATTGTCTGAAGCCAATGACA+AGG | 0.668592 | 2_2:-56020205 | Msa0259160:CDS |
| GGAGGCTAAACGTGCCATGG+AGG | 0.669867 | 2_2:-56019627 | Msa0259160:CDS |
| TGCACCTGCAGAAGAAGTGA+AGG | 0.670652 | 2_2:-56019579 | Msa0259160:CDS |
| GAAGGCTAAACATGCCATGG+AGG | 0.681550 | 2_2:-56019699 | Msa0259160:CDS |
| GTAAACATGAGGGAAAGTTG+TGG | 0.687191 | 2_2:-56018222 | Msa0259160:three_prime_UTR |
| AAGTCTGGAGGACAGGACAG+TGG | 0.693625 | 2_2:-56018490 | Msa0259160:CDS |
| ATTTATCAAACGATCCTCAG+TGG | 0.697750 | 2_2:+56020425 | None:intergenic |
| TGAACGTGCACGTGACATGG+AGG | 0.706451 | 2_2:-56019675 | Msa0259160:CDS |
| ATGGAGGCTATACGTGCACG+TGG | 0.711324 | 2_2:-56019659 | Msa0259160:CDS |
| TGTACATTGACGAAGTAACG+AGG | 0.717475 | 2_2:-56020293 | Msa0259160:CDS |
| GAAGGTTGTTGATCCAAACG+AGG | 0.741295 | 2_2:-56019561 | Msa0259160:CDS |
| AGGTTGACAAGGGAAAGAAG+AGG | 0.755319 | 2_2:-56019420 | Msa0259160:CDS |
| CGAGGAAGTGAACACCACTG+AGG | 0.780816 | 2_2:-56020439 | Msa0259160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATGTTATAATTGTTA+TGG | - | chr2_2:56019473-56019492 | Msa0259160:intron | 10.0% |
| !! | AAAAATTTAAACACAAATTA+CGG | + | chr2_2:56020362-56020381 | None:intergenic | 10.0% |
| !!! | CTATTTTGAATTATATTTTT+TGG | - | chr2_2:56020874-56020893 | Msa0259160:five_prime_UTR | 10.0% |
| !! | AAATGTAAAAATGAAAATGT+AGG | + | chr2_2:56018075-56018094 | None:intergenic | 15.0% |
| !! | TTAAATTACAGAAGATTATA+GGG | + | chr2_2:56018154-56018173 | None:intergenic | 15.0% |
| !! | ATTAAATTACAGAAGATTAT+AGG | + | chr2_2:56018155-56018174 | None:intergenic | 15.0% |
| !! | TTAAAAATTAAAGAATCTAG+TGG | + | chr2_2:56018357-56018376 | None:intergenic | 15.0% |
| !!! | AATTTTACGATAATCAATAT+AGG | - | chr2_2:56018427-56018446 | Msa0259160:intron | 15.0% |
| !!! | ATTTTACGATAATCAATATA+GGG | - | chr2_2:56018428-56018447 | Msa0259160:intron | 15.0% |
| !!! | TTAATTTTTTTACATGTCAT+TGG | - | chr2_2:56019121-56019140 | Msa0259160:intron | 15.0% |
| !! | AGGATATATAAATCTATATA+TGG | + | chr2_2:56020122-56020141 | None:intergenic | 15.0% |
| !! | AGGATATATAAATCTATATA+TGG | + | chr2_2:56020122-56020141 | None:intergenic | 15.0% |
| !!! | ATATGTTTATTACTTTTAGA+TGG | - | chr2_2:56020515-56020534 | Msa0259160:intron | 15.0% |
| !!! | TATGTTTATTACTTTTAGAT+GGG | - | chr2_2:56020516-56020535 | Msa0259160:intron | 15.0% |
| !! | CAAAAATCAATGAATTGAAT+TGG | + | chr2_2:56018245-56018264 | None:intergenic | 20.0% |
| !! | TAATATGATATCCATTCTTA+AGG | - | chr2_2:56018963-56018982 | Msa0259160:intron | 20.0% |
| !!! | ATCTTGTCTTTTAATTTTGA+AGG | - | chr2_2:56019508-56019527 | Msa0259160:intron | 20.0% |
| !! | TTACAATAGATAATACAACT+TGG | + | chr2_2:56019621-56019640 | None:intergenic | 20.0% |
| !! | GTAGAAAGATATAAACAATA+CGG | + | chr2_2:56019789-56019808 | None:intergenic | 20.0% |
| !! | TTTACAGATGTATAGTATTA+CGG | + | chr2_2:56020155-56020174 | None:intergenic | 20.0% |
| !!! | GTGTTTAAATTTTTGTTAGA+TGG | - | chr2_2:56020368-56020387 | Msa0259160:CDS | 20.0% |
| !! | TAAAGACAACAAAAAAAGAA+AGG | + | chr2_2:56020552-56020571 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTCATTTGTAGTA+TGG | - | chr2_2:56020657-56020676 | Msa0259160:intron | 20.0% |
| !! | AATCTAAACACAATGAATTT+AGG | + | chr2_2:56020799-56020818 | None:intergenic | 20.0% |
| !!! | TGAATTATATTTTTTGGTTG+AGG | - | chr2_2:56020880-56020899 | Msa0259160:five_prime_UTR | 20.0% |
| !! | TTTTACATTTTCCATTTCAG+CGG | - | chr2_2:56018085-56018104 | Msa0259160:three_prime_UTR | 25.0% |
| !!! | ATTTTTCAAAGTTGACTGTT+AGG | - | chr2_2:56018622-56018641 | Msa0259160:intron | 25.0% |
| ! | GACAACTATAAAATATCACT+AGG | + | chr2_2:56018994-56019013 | None:intergenic | 25.0% |
| ! | TAAACATTAATAAACTAGGG+AGG | + | chr2_2:56019207-56019226 | None:intergenic | 25.0% |
| ! | TCCCTAGTTTATTAATGTTT+AGG | - | chr2_2:56019206-56019225 | Msa0259160:intron | 25.0% |
| ! | GCCTAAACATTAATAAACTA+GGG | + | chr2_2:56019210-56019229 | None:intergenic | 25.0% |
| ! | AGCCTAAACATTAATAAACT+AGG | + | chr2_2:56019211-56019230 | None:intergenic | 25.0% |
| ! | TTTATTAATGTTTAGGCTTG+AGG | - | chr2_2:56019213-56019232 | Msa0259160:intron | 25.0% |
| !!! | TTTAATTTTGAAGGTTGACA+AGG | - | chr2_2:56019517-56019536 | Msa0259160:intron | 25.0% |
| !!! | TTAATTTTGAAGGTTGACAA+GGG | - | chr2_2:56019518-56019537 | Msa0259160:intron | 25.0% |
| !! | CTGTTTTCATTTTGTCTAAT+TGG | - | chr2_2:56019657-56019676 | Msa0259160:CDS | 25.0% |
| ! | AACACAATAACTTAAGAACT+TGG | + | chr2_2:56019730-56019749 | None:intergenic | 25.0% |
| ! | CAAACAATGTTTCAATCTAA+GGG | + | chr2_2:56020239-56020258 | None:intergenic | 25.0% |
| ! | TCAAACAATGTTTCAATCTA+AGG | + | chr2_2:56020240-56020259 | None:intergenic | 25.0% |
| ! | TTTACTAGATCAAAAAGCAA+GGG | + | chr2_2:56020711-56020730 | None:intergenic | 25.0% |
| !! | TTTTTGATCTAGTAAACATG+AGG | - | chr2_2:56020715-56020734 | Msa0259160:intron | 25.0% |
| !! | TTTTGATCTAGTAAACATGA+GGG | - | chr2_2:56020716-56020735 | Msa0259160:intron | 25.0% |
| TCATTTCATAGAACACAACA+AGG | - | chr2_2:56018284-56018303 | Msa0259160:three_prime_UTR | 30.0% | |
| TAGCGAATAGTATAGTGAAT+TGG | + | chr2_2:56018381-56018400 | None:intergenic | 30.0% | |
| ATCGTAAAATTACGAGAGAA+TGG | + | chr2_2:56018418-56018437 | None:intergenic | 30.0% | |
| TCGTTTGATAAATCTTCTTG+AGG | - | chr2_2:56018533-56018552 | Msa0259160:CDS | 30.0% | |
| ! | AACTTTGAAAAATCACGTTC+AGG | + | chr2_2:56018615-56018634 | None:intergenic | 30.0% |
| !! | CATTGAAATTTTAGCACTGA+CGG | - | chr2_2:56018773-56018792 | Msa0259160:intron | 30.0% |
| !!! | ATTGAAATTTTAGCACTGAC+GGG | - | chr2_2:56018774-56018793 | Msa0259160:intron | 30.0% |
| TTGTAAATAAACTTTCCCCT+CGG | - | chr2_2:56019026-56019045 | Msa0259160:intron | 30.0% | |
| !!! | AATTTTTCAAGAAGTACCGA+GGG | + | chr2_2:56019045-56019064 | None:intergenic | 30.0% |
| !! | TAATGGTACATTTGCTATCA+CGG | - | chr2_2:56019446-56019465 | Msa0259160:intron | 30.0% |
| TAACTTAAGAACTTGGCAAA+TGG | + | chr2_2:56019723-56019742 | None:intergenic | 30.0% | |
| ! | ATTGTGTTGTTGATAGATCA+TGG | - | chr2_2:56019742-56019761 | Msa0259160:intron | 30.0% |
| !!! | GTCAATTCTGAAGTTTTAGT+TGG | - | chr2_2:56019859-56019878 | Msa0259160:intron | 30.0% |
| !!! | ATTCTGAAGTTTTAGTTGGT+TGG | - | chr2_2:56019863-56019882 | Msa0259160:intron | 30.0% |
| !! | AATGTAGCTTGTTTGTATCA+TGG | - | chr2_2:56019986-56020005 | Msa0259160:intron | 30.0% |
| ! | CATGTCAATGCTGAAATTTT+AGG | - | chr2_2:56020266-56020285 | Msa0259160:CDS | 30.0% |
| !! | TTTTTGTTGTCTTTATTGCC+AGG | - | chr2_2:56020557-56020576 | Msa0259160:intron | 30.0% |
| GTTTACTAGATCAAAAAGCA+AGG | + | chr2_2:56020712-56020731 | None:intergenic | 30.0% | |
| ! | TTATGCTGTTTGAGCTATAT+AGG | - | chr2_2:56020851-56020870 | Msa0259160:exon | 30.0% |
| TTGCTTAGTGAATACTATCG+AGG | - | chr2_2:56018491-56018510 | Msa0259160:CDS | 35.0% | |
| ATTTATCAAACGATCCTCAG+TGG | + | chr2_2:56018526-56018545 | None:intergenic | 35.0% | |
| !! | GCAATTTCCATTTTTCAGAC+TGG | - | chr2_2:56018561-56018580 | Msa0259160:CDS | 35.0% |
| GAAAAATCACGTTCAGGATA+AGG | + | chr2_2:56018609-56018628 | None:intergenic | 35.0% | |
| GAGGATTGTTCTTGAAATGA+TGG | - | chr2_2:56018674-56018693 | Msa0259160:intron | 35.0% | |
| !! | GTTCTTGAAATGATGGATCT+TGG | - | chr2_2:56018681-56018700 | Msa0259160:intron | 35.0% |
| ! | AATGAAAACAGCCTTGTCAT+TGG | + | chr2_2:56018757-56018776 | None:intergenic | 35.0% |
| ! | ACGAGCTTTATCAGAAGATT+AGG | - | chr2_2:56018811-56018830 | Msa0259160:intron | 35.0% |
| !!! | ATTTTTCAAGAAGTACCGAG+GGG | + | chr2_2:56019044-56019063 | None:intergenic | 35.0% |
| !!! | CAATTTTTCAAGAAGTACCG+AGG | + | chr2_2:56019046-56019065 | None:intergenic | 35.0% |
| AAACTAGGGAGGTTTATTAC+AGG | + | chr2_2:56019196-56019215 | None:intergenic | 35.0% | |
| ATAATACAACTTGGTCTCAC+CGG | + | chr2_2:56019612-56019631 | None:intergenic | 35.0% | |
| AGTATTACGGATGTAACAGA+AGG | + | chr2_2:56020142-56020161 | None:intergenic | 35.0% | |
| AATGTTTCAATCTAAGGGTG+AGG | + | chr2_2:56020234-56020253 | None:intergenic | 35.0% | |
| CAAATTACGGATGTAACAGA+AGG | + | chr2_2:56020349-56020368 | None:intergenic | 35.0% | |
| TTGTTAGATGGTAAGAAAGC+TGG | - | chr2_2:56020380-56020399 | Msa0259160:CDS | 35.0% | |
| GTAGTATGGTGAGTATTCTA+AGG | - | chr2_2:56020671-56020690 | Msa0259160:intron | 35.0% | |
| ! | GTGAGTATTCTAAGGATGTT+AGG | - | chr2_2:56020679-56020698 | Msa0259160:intron | 35.0% |
| AGTTGTGGTATGACATGATT+TGG | - | chr2_2:56020741-56020760 | Msa0259160:intron | 35.0% | |
| ! | TGGAAGCTATTTGACTTTGA+TGG | - | chr2_2:56020761-56020780 | Msa0259160:intron | 35.0% |
| ! | GGAAGCTATTTGACTTTGAT+GGG | - | chr2_2:56020762-56020781 | Msa0259160:intron | 35.0% |
| TTCGAGTCCAGTCTGAAAAA+TGG | + | chr2_2:56018571-56018590 | None:intergenic | 40.0% | |
| TTCGTCAATGTACAGCTGTT+GGG | + | chr2_2:56018649-56018668 | None:intergenic | 40.0% | |
| TGTACATTGACGAAGTAACG+AGG | - | chr2_2:56018655-56018674 | Msa0259160:intron | 40.0% | |
| !! | CTTGAAATGATGGATCTTGG+AGG | - | chr2_2:56018684-56018703 | Msa0259160:intron | 40.0% |
| ! | ATTGTCTGAAGCCAATGACA+AGG | - | chr2_2:56018743-56018762 | Msa0259160:intron | 40.0% |
| ACTAGGACACACCTTAAGAA+TGG | + | chr2_2:56018977-56018996 | None:intergenic | 40.0% | |
| TCTTCATCTTTCTCCTCGTT+TGG | + | chr2_2:56019403-56019422 | None:intergenic | 40.0% | |
| TTCTGATGAGACTGTGAAGA+AGG | - | chr2_2:56019423-56019442 | Msa0259160:intron | 40.0% | |
| TGAGACTGTGAAGAAGGTAA+TGG | - | chr2_2:56019429-56019448 | Msa0259160:intron | 40.0% | |
| GTTTCTGCAGCAGATTCATT+AGG | + | chr2_2:56019554-56019573 | None:intergenic | 40.0% | |
| ! | TCGGTTTTCTTGGAAGAAAC+TGG | + | chr2_2:56019578-56019597 | None:intergenic | 40.0% |
| !! | TTTCTCAGGATCGGTTTTCT+TGG | + | chr2_2:56019588-56019607 | None:intergenic | 40.0% |
| AAAACCGATCCTGAGAAAAC+CGG | - | chr2_2:56019590-56019609 | Msa0259160:CDS | 40.0% | |
| CTGTGCTATATTAAGAGAGC+TGG | - | chr2_2:56020195-56020214 | Msa0259160:CDS | 40.0% | |
| ! | TTGTTGCAGTCAAGTTTTCC+TGG | + | chr2_2:56020578-56020597 | None:intergenic | 40.0% |
| TTGACTGCAACAACATAGCA+AGG | - | chr2_2:56020585-56020604 | Msa0259160:intron | 40.0% | |
| GTAAACATGAGGGAAAGTTG+TGG | - | chr2_2:56020726-56020745 | Msa0259160:intron | 40.0% | |
| ! | TTTTCAGACTGGACTCGAAG+AGG | - | chr2_2:56018572-56018591 | Msa0259160:intron | 45.0% |
| CTTCGTCAATGTACAGCTGT+TGG | + | chr2_2:56018650-56018669 | None:intergenic | 45.0% | |
| !! | AAATGATGGATCTTGGAGGC+TGG | - | chr2_2:56018688-56018707 | Msa0259160:intron | 45.0% |
| !! | AATGATGGATCTTGGAGGCT+GGG | - | chr2_2:56018689-56018708 | Msa0259160:intron | 45.0% |
| ATAAGCCTGCTGCAGCTTTA+GGG | + | chr2_2:56018882-56018901 | None:intergenic | 45.0% | |
| AATAAGCCTGCTGCAGCTTT+AGG | + | chr2_2:56018883-56018902 | None:intergenic | 45.0% | |
| ACAACCTTCACTTCTTCTGC+AGG | + | chr2_2:56019376-56019395 | None:intergenic | 45.0% | |
| GAAGGTTGTTGATCCAAACG+AGG | - | chr2_2:56019387-56019406 | Msa0259160:CDS | 45.0% | |
| AGGTTGACAAGGGAAAGAAG+AGG | - | chr2_2:56019528-56019547 | Msa0259160:CDS | 45.0% | |
| TACAGCAATTCCTCACCCTA+AGG | - | chr2_2:56020406-56020425 | Msa0259160:CDS | 45.0% | |
| CAGTCTTTCCACCTTCCTTA+GGG | + | chr2_2:56020424-56020443 | None:intergenic | 45.0% | |
| TCAGTCTTTCCACCTTCCTT+AGG | + | chr2_2:56020425-56020444 | None:intergenic | 45.0% | |
| ACTTCACTTAGCAGCATGCT+TGG | + | chr2_2:56020611-56020630 | None:intergenic | 45.0% | |
| TTCCATTTCAGCGGAAGCCA+TGG | - | chr2_2:56018094-56018113 | Msa0259160:three_prime_UTR | 50.0% | |
| GAAGCCATGGCATCTTCAAG+TGG | - | chr2_2:56018107-56018126 | Msa0259160:three_prime_UTR | 50.0% | |
| TGCTCCACTTGAAGATGCCA+TGG | + | chr2_2:56018114-56018133 | None:intergenic | 50.0% | |
| GCATCTTCAAGTGGAGCAGT+AGG | - | chr2_2:56018116-56018135 | Msa0259160:three_prime_UTR | 50.0% | |
| !! | TTTAGCACTGACGGGAGCTT+TGG | - | chr2_2:56018782-56018801 | Msa0259160:intron | 50.0% |
| ! | TAAGCCTGCTGCAGCTTTAG+GGG | + | chr2_2:56018881-56018900 | None:intergenic | 50.0% |
| ! | CCATGGCATGTTTAGCCTTC+AGG | + | chr2_2:56019249-56019268 | None:intergenic | 50.0% |
| CCTGAAGGCTAAACATGCCA+TGG | - | chr2_2:56019246-56019265 | Msa0259160:intron | 50.0% | |
| GAAGGCTAAACATGCCATGG+AGG | - | chr2_2:56019249-56019268 | Msa0259160:intron | 50.0% | |
| TTCTGCAGGTGCAGCATTCA+TGG | + | chr2_2:56019362-56019381 | None:intergenic | 50.0% | |
| TGCACCTGCAGAAGAAGTGA+AGG | - | chr2_2:56019369-56019388 | Msa0259160:CDS | 50.0% | |
| !!! | CTCACCGGTTTTCTCAGGAT+CGG | + | chr2_2:56019597-56019616 | None:intergenic | 50.0% |
| !!! | TTGGTCTCACCGGTTTTCTC+AGG | + | chr2_2:56019602-56019621 | None:intergenic | 50.0% |
| GCAATTCCTCACCCTAAGGA+AGG | - | chr2_2:56020410-56020429 | Msa0259160:CDS | 50.0% | |
| ATTCCTCACCCTAAGGAAGG+TGG | - | chr2_2:56020413-56020432 | Msa0259160:CDS | 50.0% | |
| TTTCCACCTTCCTTAGGGTG+AGG | + | chr2_2:56020419-56020438 | None:intergenic | 50.0% | |
| GATGCCAAATCTCCCAAGTC+TGG | - | chr2_2:56020443-56020462 | Msa0259160:CDS | 50.0% | |
| TCCTCCAGACTTGGGAGATT+TGG | + | chr2_2:56020450-56020469 | None:intergenic | 50.0% | |
| TGCCATGGCTTCCGCTGAAA+TGG | + | chr2_2:56018099-56018118 | None:intergenic | 55.0% | |
| CGAGGAAGTGAACACCACTG+AGG | - | chr2_2:56018509-56018528 | Msa0259160:CDS | 55.0% | |
| GACTGGACTCGAAGAGGACA+AGG | - | chr2_2:56018578-56018597 | Msa0259160:intron | 55.0% | |
| TCTTGGAGGCTGGGATGCTA+TGG | - | chr2_2:56018698-56018717 | Msa0259160:intron | 55.0% | |
| !! | AAGCCTGCTGCAGCTTTAGG+GGG | + | chr2_2:56018880-56018899 | None:intergenic | 55.0% |
| TGAGGCTGATCGTGACCTGA+AGG | - | chr2_2:56019231-56019250 | Msa0259160:intron | 55.0% | |
| TGAACGTGCACGTGACATGG+AGG | - | chr2_2:56019273-56019292 | Msa0259160:intron | 55.0% | |
| ATGGAGGCTATACGTGCACG+TGG | - | chr2_2:56019289-56019308 | Msa0259160:intron | 55.0% | |
| GCCAAATCTCCCAAGTCTGG+AGG | - | chr2_2:56020446-56020465 | Msa0259160:CDS | 55.0% | |
| ATCTCCCAAGTCTGGAGGAC+AGG | - | chr2_2:56020451-56020470 | Msa0259160:CDS | 55.0% | |
| CTGTCCTGTCCTCCAGACTT+GGG | + | chr2_2:56020458-56020477 | None:intergenic | 55.0% | |
| ACTGTCCTGTCCTCCAGACT+TGG | + | chr2_2:56020459-56020478 | None:intergenic | 55.0% | |
| AAGTCTGGAGGACAGGACAG+TGG | - | chr2_2:56020458-56020477 | Msa0259160:intron | 55.0% | |
| !! | GCACTGACGGGAGCTTTGGA+AGG | - | chr2_2:56018786-56018805 | Msa0259160:intron | 60.0% |
| ACGTGCACGTTCAGCCTCCA+TGG | + | chr2_2:56019266-56019285 | None:intergenic | 60.0% | |
| GGCTGAACGTGCACGTGACA+TGG | - | chr2_2:56019270-56019289 | Msa0259160:intron | 60.0% | |
| GCTGGAGGCTAAACGTGCCA+TGG | - | chr2_2:56019318-56019337 | Msa0259160:intron | 60.0% | |
| GGAGGCTAAACGTGCCATGG+AGG | - | chr2_2:56019321-56019340 | Msa0259160:intron | 60.0% | |
| ACGTGCAAGTGCAGCCTCCA+TGG | + | chr2_2:56019338-56019357 | None:intergenic | 60.0% | |
| !! | CCTGCTGCAGCTTTAGGGGG+AGG | + | chr2_2:56018877-56018896 | None:intergenic | 65.0% |
| CCTCCCCCTAAAGCTGCAGC+AGG | - | chr2_2:56018874-56018893 | Msa0259160:intron | 65.0% | |
| ACGTGCACGTGGACGTGAGC+TGG | - | chr2_2:56019300-56019319 | Msa0259160:intron | 65.0% | |
| TGCACGTGGACGTGAGCTGG+AGG | - | chr2_2:56019303-56019322 | Msa0259160:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 56018065 | 56020905 | 56018065 | ID=Msa0259160;Name=Msa0259160 |
| chr2_2 | mRNA | 56018065 | 56020905 | 56018065 | ID=Msa0259160-mRNA-1;Parent=Msa0259160;Name=Msa0259160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=48|0.83|0.71|1|0.83|0.71|7|317|254 |
| chr2_2 | exon | 56018065 | 56018391 | 56018065 | ID=Msa0259160-mRNA-1:exon:16922;Parent=Msa0259160-mRNA-1 |
| chr2_2 | exon | 56018481 | 56018583 | 56018481 | ID=Msa0259160-mRNA-1:exon:16921;Parent=Msa0259160-mRNA-1 |
| chr2_2 | exon | 56019359 | 56019440 | 56019359 | ID=Msa0259160-mRNA-1:exon:16920;Parent=Msa0259160-mRNA-1 |
| chr2_2 | exon | 56019526 | 56019742 | 56019526 | ID=Msa0259160-mRNA-1:exon:16919;Parent=Msa0259160-mRNA-1 |
| chr2_2 | exon | 56020138 | 56020227 | 56020138 | ID=Msa0259160-mRNA-1:exon:16918;Parent=Msa0259160-mRNA-1 |
| chr2_2 | exon | 56020234 | 56020471 | 56020234 | ID=Msa0259160-mRNA-1:exon:16917;Parent=Msa0259160-mRNA-1 |
| chr2_2 | exon | 56020833 | 56020905 | 56020833 | ID=Msa0259160-mRNA-1:exon:16916;Parent=Msa0259160-mRNA-1 |
| chr2_2 | five_prime_UTR | 56020858 | 56020905 | 56020858 | ID=Msa0259160-mRNA-1:five_prime_utr;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56020833 | 56020857 | 56020833 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56020234 | 56020471 | 56020234 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56020138 | 56020227 | 56020138 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56019526 | 56019742 | 56019526 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56019359 | 56019440 | 56019359 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56018481 | 56018583 | 56018481 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | CDS | 56018382 | 56018391 | 56018382 | ID=Msa0259160-mRNA-1:cds;Parent=Msa0259160-mRNA-1 |
| chr2_2 | three_prime_UTR | 56018065 | 56018381 | 56018065 | ID=Msa0259160-mRNA-1:three_prime_utr;Parent=Msa0259160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
