AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0259820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259820 MtrunA17_Chr2g0333551 84.431 167 20 1 1 161 136 302 1.31e-100 297
Msa0259820 MtrunA17_Chr2g0316951 31.655 139 85 4 10 145 9 140 2.26e-17 76.6
Msa0259820 MtrunA17_Chr3g0125131 30.216 139 87 2 10 147 130 259 3.64e-17 77.8
Msa0259820 MtrunA17_Chr4g0020841 30.935 139 86 4 10 145 156 287 3.04e-16 75.1
Msa0259820 MtrunA17_Chr4g0020821 30.935 139 86 4 10 145 333 464 3.49e-16 75.1
Msa0259820 MtrunA17_Chr2g0308441 29.496 139 88 3 10 145 165 296 9.30e-16 73.6
Msa0259820 MtrunA17_Chr3g0143411 26.582 158 101 3 12 163 179 327 1.52e-14 70.1
Msa0259820 MtrunA17_Chr1g0208371 31.333 150 91 4 8 154 153 293 3.03e-14 69.3
Msa0259820 MtrunA17_Chr7g0252871 30.769 143 88 4 7 147 199 332 2.23e-13 66.6
Msa0259820 MtrunA17_Chr3g0079211 29.600 125 77 3 9 131 128 243 2.47e-12 63.5
Msa0259820 MtrunA17_Chr8g0390041 29.577 142 90 3 14 154 147 279 3.13e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0259820 AT1G80550.1 57.143 161 64 3 1 161 107 262 2.66e-58 188
Msa0259820 AT3G15200.1 33.571 140 83 3 10 148 177 307 7.05e-16 74.3
Msa0259820 AT1G77360.2 30.714 140 87 3 10 148 131 261 9.23e-16 73.9
Msa0259820 AT1G77360.1 30.714 140 87 3 10 148 167 297 1.41e-15 73.6
Msa0259820 AT5G15010.1 36.054 147 83 4 1 145 187 324 1.60e-14 70.5
Msa0259820 AT1G20300.1 26.667 150 100 3 13 161 188 328 1.78e-13 67.4

Find 45 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTATTTCTTGGGCAAAT+TGG 0.181459 2_2:+57166399 Msa0259820:three_prime_UTR
GCTTCGTGGGTGGTATAAAT+TGG 0.252895 2_2:+57162002 Msa0259820:CDS
ACTGAAAATTGTCAAATAAA+TGG 0.270273 2_2:+57166430 Msa0259820:three_prime_UTR
GCATTCGTATTCAATTTATA+TGG 0.274776 2_2:+57162089 Msa0259820:CDS
GGAGTAAATGTTGGGAGTTT+TGG 0.278811 2_2:+57162031 Msa0259820:CDS
CTTTATTTCTTGGGCAAATT+GGG 0.291832 2_2:+57166400 Msa0259820:three_prime_UTR
AAGAAATAAAGATGAGAAAA+TGG 0.301898 2_2:-57166388 None:intergenic
TGTTCTTGAAGCTCAAGATT+TGG 0.339499 2_2:+57161882 Msa0259820:CDS
CTTCGTGGGTGGTATAAATT+GGG 0.339735 2_2:+57162003 Msa0259820:CDS
AACTCTGAAGGTGGTGTGAT+TGG 0.384447 2_2:-57161728 None:intergenic
CTTTAACTTGGAACGTTGAT+GGG 0.391343 2_2:+57161929 Msa0259820:CDS
ATCACCCTCACTTGGCTGTT+AGG 0.392014 2_2:-57166344 None:intergenic
ATATATCGTTGTAGATTCTC+TGG 0.392327 2_2:+57166306 Msa0259820:three_prime_UTR
ACTTTAACTTGGAACGTTGA+TGG 0.399647 2_2:+57161928 Msa0259820:CDS
GGGATGAAATGGATAGAAAA+GGG 0.413353 2_2:+57162052 Msa0259820:CDS
AACAGCCAAGTGAGGGTGAT+TGG 0.419020 2_2:+57166347 Msa0259820:three_prime_UTR
CTCAGAATAATCTTAATAGA+AGG 0.420876 2_2:+57166461 Msa0259820:three_prime_UTR
TGGAACGTTGATGGGGTTGA+TGG 0.438978 2_2:+57161937 Msa0259820:CDS
CGCATCAATGAGATTTGAAA+AGG 0.439093 2_2:-57161842 None:intergenic
TGGGATGAAATGGATAGAAA+AGG 0.448452 2_2:+57162051 Msa0259820:CDS
GGATAGAAAAGGGGTTGAAA+AGG 0.456377 2_2:+57162062 Msa0259820:CDS
AAAAGATTCAAACTTTAACT+TGG 0.465772 2_2:+57161917 Msa0259820:intron
AACAATTTCACAGCTTTCCA+TGG 0.487320 2_2:-57162135 None:intergenic
TCTTGCCAATCACCCTCACT+TGG 0.498777 2_2:-57166352 None:intergenic
CATCAGCAATTCAGCATACA+AGG 0.499879 2_2:-57166272 None:intergenic
GGAACGTTGATGGGGTTGAT+GGG 0.517245 2_2:+57161938 Msa0259820:CDS
TGTCGAAAGGTGGGAAGCCA+TGG 0.520310 2_2:+57162118 Msa0259820:CDS
TGGGGTGGTGGAGTAAATGT+TGG 0.520442 2_2:+57162022 Msa0259820:CDS
GTGTGATTGGGCAAAGAATG+AGG 0.525687 2_2:-57161715 None:intergenic
GGTGGTATAAATTGGGGTGG+TGG 0.528405 2_2:+57162010 Msa0259820:CDS
ACTCTGAAGGTGGTGTGATT+GGG 0.534848 2_2:-57161727 None:intergenic
GGGGTGGTGGAGTAAATGTT+GGG 0.561091 2_2:+57162023 Msa0259820:CDS
TGGCAGAATAAAGTCAACAT+TGG 0.572716 2_2:+57166127 Msa0259820:intron
TTAACATTGTGCTTCGTGGG+TGG 0.583064 2_2:+57161992 Msa0259820:CDS
TGTGATTGGGCAAAGAATGA+GGG 0.584620 2_2:-57161714 None:intergenic
GGATGAAATGGATAGAAAAG+GGG 0.592048 2_2:+57162053 Msa0259820:CDS
TTTAACTTGGAACGTTGATG+GGG 0.604968 2_2:+57161930 Msa0259820:CDS
TAATCTTAATAGAAGGAACA+TGG 0.610325 2_2:+57166468 Msa0259820:three_prime_UTR
AAAGACCTAACAGCCAAGTG+AGG 0.624525 2_2:+57166339 Msa0259820:three_prime_UTR
ACGTTTGAACATAACTCTGA+AGG 0.630901 2_2:-57161740 None:intergenic
AAGACCTAACAGCCAAGTGA+GGG 0.638524 2_2:+57166340 Msa0259820:three_prime_UTR
AGCGTCGTCGACACAATGAG+CGG 0.651441 2_2:-57161770 None:intergenic
GTGGGTGGTATAAATTGGGG+TGG 0.673179 2_2:+57162007 Msa0259820:CDS
TTTGAACATAACTCTGAAGG+TGG 0.682861 2_2:-57161737 None:intergenic
TTCGTGGGTGGTATAAATTG+GGG 0.738741 2_2:+57162004 Msa0259820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTTATAATACAATTATA+AGG + chr2_2:57162301-57162320 Msa0259820:intron 10.0%
!! TATAAAAAAAGTTAAACAAG+TGG - chr2_2:57163864-57163883 None:intergenic 15.0%
!! ATCAAACAAATAATATGTTT+GGG - chr2_2:57164195-57164214 None:intergenic 15.0%
!! AATCAAACAAATAATATGTT+TGG - chr2_2:57164196-57164215 None:intergenic 15.0%
!! CATCATAATATAATAATAAC+TGG - chr2_2:57164394-57164413 None:intergenic 15.0%
!! AAGTATCTTTAATAAAACAT+TGG + chr2_2:57166062-57166081 Msa0259820:intron 15.0%
!!! ATTTTTTTTTCCTTTCTAAT+TGG + chr2_2:57166107-57166126 Msa0259820:intron 15.0%
!! AAAAGATTCAAACTTTAACT+TGG + chr2_2:57161917-57161936 Msa0259820:intron 20.0%
!! GTGTGATAATTATAGATATA+AGG + chr2_2:57162329-57162348 Msa0259820:intron 20.0%
!! AACAACTCAATAATAAACTT+GGG - chr2_2:57162444-57162463 None:intergenic 20.0%
!! AAACAACTCAATAATAAACT+TGG - chr2_2:57162445-57162464 None:intergenic 20.0%
!!! TTTATTATTGAGTTGTTTGA+TGG + chr2_2:57162447-57162466 Msa0259820:intron 20.0%
!!! TTTTTTAGTTTGGAATAGAA+TGG + chr2_2:57162557-57162576 Msa0259820:intron 20.0%
!! AAATGAGAAGAAAATTTGTA+AGG - chr2_2:57163083-57163102 None:intergenic 20.0%
!!! CAAAGTTAGGTTTTATTAAT+TGG + chr2_2:57163264-57163283 Msa0259820:intron 20.0%
!!! TTTTCAATAAGAATTGCTTT+TGG + chr2_2:57163754-57163773 Msa0259820:intron 20.0%
!! AGTTCTATTTATTCTATTCA+TGG + chr2_2:57163883-57163902 Msa0259820:intron 20.0%
!! AATTGGAACTACAAAATTTA+TGG + chr2_2:57164851-57164870 Msa0259820:intron 20.0%
!!! CAGATGTAGTAAAATTTTTA+GGG + chr2_2:57164901-57164920 Msa0259820:intron 20.0%
!! TCTACATATTAGAATTAGAA+AGG - chr2_2:57165610-57165629 None:intergenic 20.0%
!! ATTCTAATATGTAGAATCAT+AGG + chr2_2:57165615-57165634 Msa0259820:intron 20.0%
!!! GATTTTGATTTTGATAGTAT+TGG + chr2_2:57165651-57165670 Msa0259820:intron 20.0%
!! TCTATAAATCAATTGTTTGT+AGG + chr2_2:57166020-57166039 Msa0259820:intron 20.0%
!!! GTTTTATTAAAGATACTTTC+AGG - chr2_2:57166060-57166079 None:intergenic 20.0%
!! ATCTATTAAAAAAGCAAAGT+GGG + chr2_2:57166207-57166226 Msa0259820:three_prime_UTR 20.0%
!! AAGAAATAAAGATGAGAAAA+TGG - chr2_2:57166391-57166410 None:intergenic 20.0%
!!! ATTTTCTCATCTTTATTTCT+TGG + chr2_2:57166390-57166409 Msa0259820:three_prime_UTR 20.0%
!!! TTTTCTCATCTTTATTTCTT+GGG + chr2_2:57166391-57166410 Msa0259820:three_prime_UTR 20.0%
!! ACTGAAAATTGTCAAATAAA+TGG + chr2_2:57166430-57166449 Msa0259820:three_prime_UTR 20.0%
! GCATTCGTATTCAATTTATA+TGG + chr2_2:57162089-57162108 Msa0259820:CDS 25.0%
!! TATATGGATATTTTGTCGAA+AGG + chr2_2:57162105-57162124 Msa0259820:CDS 25.0%
! GTATTATAAGTAACAACAGT+AGG - chr2_2:57162294-57162313 None:intergenic 25.0%
! ATAACATATGTATCCATAGT+AGG - chr2_2:57162495-57162514 None:intergenic 25.0%
!!! TTCGATTGGTTTTTTTAGTT+TGG + chr2_2:57162547-57162566 Msa0259820:intron 25.0%
!!! GAAAAGATATTCAAGTTTTG+TGG + chr2_2:57162802-57162821 Msa0259820:intron 25.0%
! AAAAACTGGCATTTCAAAAA+TGG - chr2_2:57162906-57162925 None:intergenic 25.0%
!!! ATTTTTGAAATGCCAGTTTT+TGG + chr2_2:57162905-57162924 Msa0259820:intron 25.0%
! TCATATAATAGTTGTTTGTG+TGG - chr2_2:57162959-57162978 None:intergenic 25.0%
! TAAAAGAAACAGATGAAGAA+GGG - chr2_2:57163241-57163260 None:intergenic 25.0%
!! GTTTCTTTTACTACAAAGTT+AGG + chr2_2:57163251-57163270 Msa0259820:intron 25.0%
! TGAAATACCAAGAAAATAAG+TGG - chr2_2:57163389-57163408 None:intergenic 25.0%
!!! AGTATTTGGTGATTTTCAAT+TGG + chr2_2:57163806-57163825 Msa0259820:intron 25.0%
! CTATAGATTATCAGAAAACA+TGG - chr2_2:57163924-57163943 None:intergenic 25.0%
!! CATGTTTTCTGATAATCTAT+AGG + chr2_2:57163922-57163941 Msa0259820:intron 25.0%
! AGAAAATGTTCAATCTCAAA+TGG - chr2_2:57164029-57164048 None:intergenic 25.0%
! AAACAAATAATATGTTTGGG+AGG - chr2_2:57164192-57164211 None:intergenic 25.0%
! GCTTTGATTGAATTCAAATT+TGG + chr2_2:57164217-57164236 Msa0259820:intron 25.0%
!! CCTAAAAATTTTACTACATC+TGG - chr2_2:57164903-57164922 None:intergenic 25.0%
!! CCAGATGTAGTAAAATTTTT+AGG + chr2_2:57164900-57164919 Msa0259820:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr2_2:57165168-57165187 Msa0259820:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr2_2:57165208-57165227 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr2_2:57165215-57165234 Msa0259820:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr2_2:57165350-57165369 None:intergenic 25.0%
!! AATCATAGGATTTTATATGC+AGG + chr2_2:57165629-57165648 Msa0259820:intron 25.0%
! AATGAAATAAGATGAATAGC+AGG - chr2_2:57165845-57165864 None:intergenic 25.0%
! TATCCATGTTATACTGTTTA+TGG + chr2_2:57165969-57165988 Msa0259820:intron 25.0%
! AAATCATTCAAGCAATATTG+CGG - chr2_2:57166091-57166110 None:intergenic 25.0%
!! TGTTTTCATACATTAGATGA+AGG + chr2_2:57166175-57166194 Msa0259820:exon 25.0%
! CATCTATTAAAAAAGCAAAG+TGG + chr2_2:57166206-57166225 Msa0259820:three_prime_UTR 25.0%
! TCTATTAAAAAAGCAAAGTG+GGG + chr2_2:57166208-57166227 Msa0259820:three_prime_UTR 25.0%
! CTCAGAATAATCTTAATAGA+AGG + chr2_2:57166461-57166480 Msa0259820:three_prime_UTR 25.0%
! TAATCTTAATAGAAGGAACA+TGG + chr2_2:57166468-57166487 Msa0259820:three_prime_UTR 25.0%
!!! AAGCTCAAGATTTGGTTTTT+GGG + chr2_2:57161890-57161909 Msa0259820:intron 30.0%
! ATTTTTAACATTGTGCTTCG+TGG + chr2_2:57161988-57162007 Msa0259820:CDS 30.0%
! TTTTTAACATTGTGCTTCGT+GGG + chr2_2:57161989-57162008 Msa0259820:CDS 30.0%
GAAAGCTGTGAAATTGTTTA+AGG + chr2_2:57162140-57162159 Msa0259820:intron 30.0%
TTTAAGGAGATGAAGAGAAA+AGG + chr2_2:57162156-57162175 Msa0259820:intron 30.0%
!!! AAGGTGTTGATTTTTCGATT+AGG + chr2_2:57162235-57162254 Msa0259820:intron 30.0%
TTTCGTGAAATGAAGGATTT+AGG + chr2_2:57162261-57162280 Msa0259820:intron 30.0%
CATTGATATGAAACAGCATT+AGG - chr2_2:57162399-57162418 None:intergenic 30.0%
TAGATGTAAACATTTCTGAC+AGG - chr2_2:57162859-57162878 None:intergenic 30.0%
! AATAGTTGTTTGTGTGGTTT+TGG - chr2_2:57162953-57162972 None:intergenic 30.0%
GTCATTGTCTCAAAATGTAA+AGG - chr2_2:57163027-57163046 None:intergenic 30.0%
CTCAACAATTGCATTAAGAT+GGG - chr2_2:57163166-57163185 None:intergenic 30.0%
TCTCAACAATTGCATTAAGA+TGG - chr2_2:57163167-57163186 None:intergenic 30.0%
GTAAAAGAAACAGATGAAGA+AGG - chr2_2:57163242-57163261 None:intergenic 30.0%
AATATCTGTGGCTTAAGTTT+GGG - chr2_2:57163356-57163375 None:intergenic 30.0%
TAATATCTGTGGCTTAAGTT+TGG - chr2_2:57163357-57163376 None:intergenic 30.0%
AAACTTAAGCCACAGATATT+AGG + chr2_2:57163356-57163375 Msa0259820:intron 30.0%
AACTTAAGCCACAGATATTA+GGG + chr2_2:57163357-57163376 Msa0259820:intron 30.0%
CATTGCAAGTTATAGACATA+GGG - chr2_2:57163421-57163440 None:intergenic 30.0%
! CTATGTCTATAACTTGCAAT+GGG + chr2_2:57163420-57163439 Msa0259820:intron 30.0%
TATCTGCACATCAATAATTC+TGG - chr2_2:57163497-57163516 None:intergenic 30.0%
AGAATTATTGATGTGCAGAT+AGG + chr2_2:57163496-57163515 Msa0259820:intron 30.0%
AAAGAAATTATCAACTACCC+AGG - chr2_2:57163737-57163756 None:intergenic 30.0%
AAAATCACCAAATACTTCGA+TGG - chr2_2:57163802-57163821 None:intergenic 30.0%
! TGGTGATTTTCAATTGGTAA+TGG + chr2_2:57163812-57163831 Msa0259820:intron 30.0%
!! GGTGATTTTCAATTGGTAAT+GGG + chr2_2:57163813-57163832 Msa0259820:intron 30.0%
AGATTATCAGAAAACATGGT+TGG - chr2_2:57163920-57163939 None:intergenic 30.0%
TTGCTCAAATTCTTCTTCTT+TGG - chr2_2:57164062-57164081 None:intergenic 30.0%
AAATGACATCATGCAATGTA+TGG - chr2_2:57164128-57164147 None:intergenic 30.0%
CTGAATGTTGATGTTGAATA+CGG + chr2_2:57164433-57164452 Msa0259820:intron 30.0%
CGTAGTCAAGTAAGTAAAAT+TGG + chr2_2:57164834-57164853 Msa0259820:intron 30.0%
CAACTACATTGGATCATTTA+GGG + chr2_2:57164930-57164949 Msa0259820:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr2_2:57165164-57165183 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr2_2:57165203-57165222 Msa0259820:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr2_2:57165225-57165244 Msa0259820:intron 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr2_2:57165283-57165302 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr2_2:57165284-57165303 Msa0259820:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr2_2:57165354-57165373 Msa0259820:intron 30.0%
AATGAATTTCCTTCTGGTAT+CGG + chr2_2:57165573-57165592 Msa0259820:intron 30.0%
CATATTAGAATTAGAAAGGC+AGG - chr2_2:57165606-57165625 None:intergenic 30.0%
!!! TGTGCTTTTTTAGTTGTATC+TGG + chr2_2:57165770-57165789 Msa0259820:intron 30.0%
ATAGCAGGATTTAAAGAAAC+AGG - chr2_2:57165830-57165849 None:intergenic 30.0%
AAGGATAAACATTCGAGAAA+TGG - chr2_2:57165899-57165918 None:intergenic 30.0%
ATGCCATAAACAGTATAACA+TGG - chr2_2:57165975-57165994 None:intergenic 30.0%
ATGTTATACTGTTTATGGCA+TGG + chr2_2:57165974-57165993 Msa0259820:intron 30.0%
! ATTGATTTATAGACTGAGAG+AGG - chr2_2:57166013-57166032 None:intergenic 30.0%
AAAGATACTTTCAGGAAGTT+GGG - chr2_2:57166052-57166071 None:intergenic 30.0%
TAAAGATACTTTCAGGAAGT+TGG - chr2_2:57166053-57166072 None:intergenic 30.0%
CTTTATTCTGCCAATTAGAA+AGG - chr2_2:57166120-57166139 None:intergenic 30.0%
CTATTAAAAAAGCAAAGTGG+GGG + chr2_2:57166209-57166228 Msa0259820:three_prime_UTR 30.0%
ATATATCGTTGTAGATTCTC+TGG + chr2_2:57166306-57166325 Msa0259820:three_prime_UTR 30.0%
! TCTTTATTTCTTGGGCAAAT+TGG + chr2_2:57166399-57166418 Msa0259820:three_prime_UTR 30.0%
! CTTTATTTCTTGGGCAAATT+GGG + chr2_2:57166400-57166419 Msa0259820:three_prime_UTR 30.0%
! TTTGAACATAACTCTGAAGG+TGG - chr2_2:57161740-57161759 None:intergenic 35.0%
ACGTTTGAACATAACTCTGA+AGG - chr2_2:57161743-57161762 None:intergenic 35.0%
CGCATCAATGAGATTTGAAA+AGG - chr2_2:57161845-57161864 None:intergenic 35.0%
TGTTCTTGAAGCTCAAGATT+TGG + chr2_2:57161882-57161901 Msa0259820:CDS 35.0%
!!! GAAGCTCAAGATTTGGTTTT+TGG + chr2_2:57161889-57161908 Msa0259820:intron 35.0%
!!! AGCTCAAGATTTGGTTTTTG+GGG + chr2_2:57161891-57161910 Msa0259820:intron 35.0%
!! ACTTTAACTTGGAACGTTGA+TGG + chr2_2:57161928-57161947 Msa0259820:CDS 35.0%
!! CTTTAACTTGGAACGTTGAT+GGG + chr2_2:57161929-57161948 Msa0259820:CDS 35.0%
!! TTTAACTTGGAACGTTGATG+GGG + chr2_2:57161930-57161949 Msa0259820:CDS 35.0%
! GAGTAAATGTTGGGAGTTTT+GGG + chr2_2:57162032-57162051 Msa0259820:CDS 35.0%
TGGGATGAAATGGATAGAAA+AGG + chr2_2:57162051-57162070 Msa0259820:CDS 35.0%
GGGATGAAATGGATAGAAAA+GGG + chr2_2:57162052-57162071 Msa0259820:CDS 35.0%
GGATGAAATGGATAGAAAAG+GGG + chr2_2:57162053-57162072 Msa0259820:CDS 35.0%
! ATGGATATTTTGTCGAAAGG+TGG + chr2_2:57162108-57162127 Msa0259820:CDS 35.0%
! TGGATATTTTGTCGAAAGGT+GGG + chr2_2:57162109-57162128 Msa0259820:CDS 35.0%
AACAATTTCACAGCTTTCCA+TGG - chr2_2:57162138-57162157 None:intergenic 35.0%
AACATTGTGATTAGAGCCAT+TGG + chr2_2:57162204-57162223 Msa0259820:intron 35.0%
! TAGGTTGTTTCGTGAAATGA+AGG + chr2_2:57162254-57162273 Msa0259820:intron 35.0%
! TTTGATGGTATGATTGAGAG+TGG + chr2_2:57162462-57162481 Msa0259820:intron 35.0%
! TTGATGGTATGATTGAGAGT+GGG + chr2_2:57162463-57162482 Msa0259820:intron 35.0%
TGGAATAGAATGGAAGAACT+TGG + chr2_2:57162567-57162586 Msa0259820:intron 35.0%
GAAGTATGATGAAGAGATGT+TGG + chr2_2:57162665-57162684 Msa0259820:intron 35.0%
TGAAACCACACAAGAGATTT+CGG + chr2_2:57162768-57162787 Msa0259820:intron 35.0%
TGGAAGAAATCAATGGTGTT+AGG - chr2_2:57162933-57162952 None:intergenic 35.0%
!!! GTGGTTTTGGAAGAAATCAA+TGG - chr2_2:57162940-57162959 None:intergenic 35.0%
TGACAAAAATTGCATCAGGA+TGG - chr2_2:57162982-57163001 None:intergenic 35.0%
! TTTGTCACTGCATTGCTATT+AGG + chr2_2:57162995-57163014 Msa0259820:intron 35.0%
TATTGTGGAAACTGGAAACA+GGG - chr2_2:57163112-57163131 None:intergenic 35.0%
TTCAAATCTGCACAGTATTG+TGG - chr2_2:57163127-57163146 None:intergenic 35.0%
AATACTGTGCAGATTTGAAC+TGG + chr2_2:57163128-57163147 Msa0259820:intron 35.0%
CAAGTTTGAACAGTAATCAC+TGG - chr2_2:57163304-57163323 None:intergenic 35.0%
CAGTGATTACTGTTCAAACT+TGG + chr2_2:57163302-57163321 Msa0259820:intron 35.0%
! TGGATTGATAACTTAGACAC+AGG + chr2_2:57163322-57163341 Msa0259820:intron 35.0%
!! GAGGATTCCACTTATTTTCT+TGG + chr2_2:57163379-57163398 Msa0259820:intron 35.0%
CCATTGCAAGTTATAGACAT+AGG - chr2_2:57163422-57163441 None:intergenic 35.0%
! CCTATGTCTATAACTTGCAA+TGG + chr2_2:57163419-57163438 Msa0259820:intron 35.0%
ACTGTTGCCTTTGGATATAT+CGG - chr2_2:57163635-57163654 None:intergenic 35.0%
TATCCAAAGGCAACAGTTAT+CGG + chr2_2:57163638-57163657 Msa0259820:intron 35.0%
!! GCTAGTTTCCTAATGCTTTT+TGG + chr2_2:57163686-57163705 Msa0259820:intron 35.0%
!! ATCAACTGCCAAAAAGCATT+AGG - chr2_2:57163697-57163716 None:intergenic 35.0%
AATACTTCGATGGCTAAGTA+AGG - chr2_2:57163792-57163811 None:intergenic 35.0%
! TACTTAGCCATCGAAGTATT+TGG + chr2_2:57163792-57163811 Msa0259820:intron 35.0%
CTCTGCACACACAAATATAA+TGG + chr2_2:57163969-57163988 Msa0259820:intron 35.0%
TCAAATGGACAAACATGCAT+TGG - chr2_2:57164014-57164033 None:intergenic 35.0%
CAGAATCAAAGGCAAAAGTA+AGG - chr2_2:57164319-57164338 None:intergenic 35.0%
GAGGAGAATAACAGAATCAA+AGG - chr2_2:57164330-57164349 None:intergenic 35.0%
! ATGTTGAATACGGTGTGTTT+TGG + chr2_2:57164443-57164462 Msa0259820:intron 35.0%
! TATAGTGTCATTAGCAATCC+AGG + chr2_2:57164532-57164551 Msa0259820:intron 35.0%
TGTTGTGATTGTTGCTGAAT+TGG - chr2_2:57164583-57164602 None:intergenic 35.0%
ATTCAGCAACAATCACAACA+AGG + chr2_2:57164583-57164602 Msa0259820:intron 35.0%
ACCAACTATATTAAGCACAG+TGG + chr2_2:57164621-57164640 Msa0259820:intron 35.0%
ACCACTGTGCTTAATATAGT+TGG - chr2_2:57164625-57164644 None:intergenic 35.0%
TATATTAAGCACAGTGGTCA+GGG + chr2_2:57164627-57164646 Msa0259820:intron 35.0%
! TGGGTTTTCAATGAGATATG+TGG + chr2_2:57164717-57164736 Msa0259820:intron 35.0%
TACTTACTTGACTACGTTTC+TGG - chr2_2:57164830-57164849 None:intergenic 35.0%
AATGATCCAATGTAGTTGGT+AGG - chr2_2:57164928-57164947 None:intergenic 35.0%
CCTAAATGATCCAATGTAGT+TGG - chr2_2:57164932-57164951 None:intergenic 35.0%
CCAACTACATTGGATCATTT+AGG + chr2_2:57164929-57164948 Msa0259820:intron 35.0%
ATTTGTGCCCTAATTAAGCT+TGG + chr2_2:57165017-57165036 Msa0259820:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr2_2:57165184-57165203 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr2_2:57165196-57165215 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr2_2:57165280-57165299 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr2_2:57165336-57165355 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr2_2:57165341-57165360 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr2_2:57165361-57165380 None:intergenic 35.0%
! ACAATTTTCCCTTCAAGAGT+GGG - chr2_2:57165387-57165406 None:intergenic 35.0%
! AACAATTTTCCCTTCAAGAG+TGG - chr2_2:57165388-57165407 None:intergenic 35.0%
ACTCTTGAAGGGAAAATTGT+TGG + chr2_2:57165387-57165406 Msa0259820:intron 35.0%
TGTTGGAATTCAAGTGTTAG+TGG + chr2_2:57165404-57165423 Msa0259820:intron 35.0%
!!! TAGGAATGGAGGTTTTGAAA+AGG + chr2_2:57165443-57165462 Msa0259820:intron 35.0%
! GATGCCAATTCCAAGATTTT+CGG + chr2_2:57165482-57165501 Msa0259820:intron 35.0%
! ATGCCAATTCCAAGATTTTC+GGG + chr2_2:57165483-57165502 Msa0259820:intron 35.0%
AATCCCGAAAATCTTGGAAT+TGG - chr2_2:57165489-57165508 None:intergenic 35.0%
!! AATTCCAAGATTTTCGGGAT+TGG + chr2_2:57165488-57165507 Msa0259820:intron 35.0%
CAGAAGAATGAATTTCCTTC+TGG + chr2_2:57165567-57165586 Msa0259820:intron 35.0%
ATGAATTTCCTTCTGGTATC+GGG + chr2_2:57165574-57165593 Msa0259820:intron 35.0%
ATTAGAATTAGAAAGGCAGG+AGG - chr2_2:57165603-57165622 None:intergenic 35.0%
TTTCTTTGCAAGTGTTTGTC+AGG - chr2_2:57165703-57165722 None:intergenic 35.0%
GACAAACACTTGCAAAGAAA+AGG + chr2_2:57165703-57165722 Msa0259820:intron 35.0%
!! ACTTCCAAAAGCATTAAGAC+GGG - chr2_2:57165932-57165951 None:intergenic 35.0%
!! GACTTCCAAAAGCATTAAGA+CGG - chr2_2:57165933-57165952 None:intergenic 35.0%
!! TAATGCTTTTGGAAGTCATC+TGG + chr2_2:57165936-57165955 Msa0259820:intron 35.0%
TGGCAGAATAAAGTCAACAT+TGG + chr2_2:57166127-57166146 Msa0259820:intron 35.0%
GCATACAAGGCTAAAAAATG+TGG - chr2_2:57166262-57166281 None:intergenic 35.0%
TGTGATTGGGCAAAGAATGA+GGG - chr2_2:57161717-57161736 None:intergenic 40.0%
CTTCGTGGGTGGTATAAATT+GGG + chr2_2:57162003-57162022 Msa0259820:CDS 40.0%
TTCGTGGGTGGTATAAATTG+GGG + chr2_2:57162004-57162023 Msa0259820:CDS 40.0%
! GGAGTAAATGTTGGGAGTTT+TGG + chr2_2:57162031-57162050 Msa0259820:CDS 40.0%
!!! TTGGGAGTTTTGGGATGAAA+TGG + chr2_2:57162041-57162060 Msa0259820:CDS 40.0%
GGATAGAAAAGGGGTTGAAA+AGG + chr2_2:57162062-57162081 Msa0259820:CDS 40.0%
AACACCTTGAGAAACACCAA+TGG - chr2_2:57162223-57162242 None:intergenic 40.0%
TGATGGTATGATTGAGAGTG+GGG + chr2_2:57162464-57162483 Msa0259820:intron 40.0%
TGCTTTGATTGATGCTCTTG+TGG + chr2_2:57162617-57162636 Msa0259820:intron 40.0%
ATTGATGCTCTTGTGGAGAA+GGG + chr2_2:57162624-57162643 Msa0259820:intron 40.0%
! GATGAAGAGATGTTGGCTAA+AGG + chr2_2:57162672-57162691 Msa0259820:intron 40.0%
TAAGACCGAAATCTCTTGTG+TGG - chr2_2:57162776-57162795 None:intergenic 40.0%
! TGGTGTTAGGATCCAAAAAC+TGG - chr2_2:57162920-57162939 None:intergenic 40.0%
GCAGTGACAAAAATTGCATC+AGG - chr2_2:57162986-57163005 None:intergenic 40.0%
GTATTGTGGAAACTGGAAAC+AGG - chr2_2:57163113-57163132 None:intergenic 40.0%
! ATCAGTTTTGCAGTTCACTC+TGG - chr2_2:57163195-57163214 None:intergenic 40.0%
ATCTCACACATGCTGTGTAA+TGG + chr2_2:57163213-57163232 Msa0259820:intron 40.0%
TAACTTAGACACAGGCCAAT+TGG + chr2_2:57163330-57163349 Msa0259820:intron 40.0%
TTAAGCCACAGATATTAGGG+AGG + chr2_2:57163360-57163379 Msa0259820:intron 40.0%
! TGTCTATAACTTGCAATGGG+AGG + chr2_2:57163423-57163442 Msa0259820:intron 40.0%
! GTCTATAACTTGCAATGGGA+GGG + chr2_2:57163424-57163443 Msa0259820:intron 40.0%
GATAGGAGTTCAACATCCAA+AGG + chr2_2:57163513-57163532 Msa0259820:intron 40.0%
AGTTCAACATCCAAAGGCAA+CGG + chr2_2:57163519-57163538 Msa0259820:intron 40.0%
! GCTAGTTTCCTGATTCTTCT+TGG + chr2_2:57163574-57163593 Msa0259820:intron 40.0%
ATCAACTGCCAAGAAGAATC+AGG - chr2_2:57163585-57163604 None:intergenic 40.0%
TGATTCTTCTTGGCAGTTGA+TGG + chr2_2:57163584-57163603 Msa0259820:intron 40.0%
GATTCTTCTTGGCAGTTGAT+GGG + chr2_2:57163585-57163604 Msa0259820:intron 40.0%
TTGGCATCCGATATATCCAA+AGG + chr2_2:57163625-57163644 Msa0259820:intron 40.0%
CAAAAGCAACAGAATCAACG+AGG - chr2_2:57164349-57164368 None:intergenic 40.0%
!!! CTCGTTGATTCTGTTGCTTT+TGG + chr2_2:57164347-57164366 Msa0259820:intron 40.0%
GCTGAATTGGATTCTTCGAT+TGG - chr2_2:57164570-57164589 None:intergenic 40.0%
CTATATTAAGCACAGTGGTC+AGG + chr2_2:57164626-57164645 Msa0259820:intron 40.0%
TTCAATCTCATCCTGCACAA+TGG + chr2_2:57164684-57164703 Msa0259820:intron 40.0%
TCAATCTCATCCTGCACAAT+GGG + chr2_2:57164685-57164704 Msa0259820:intron 40.0%
AGATATGTGGCAAATGCTTC+AGG + chr2_2:57164730-57164749 Msa0259820:intron 40.0%
GATTGTTGAAGTAAGGAACC+CGG - chr2_2:57164758-57164777 None:intergenic 40.0%
GGGTTCCTTACTTCAACAAT+CGG + chr2_2:57164757-57164776 Msa0259820:intron 40.0%
GGTTCCTTACTTCAACAATC+GGG + chr2_2:57164758-57164777 Msa0259820:intron 40.0%
AACACCCGATTGTTGAAGTA+AGG - chr2_2:57164765-57164784 None:intergenic 40.0%
! ACTTGACTACGTTTCTGGAA+GGG - chr2_2:57164825-57164844 None:intergenic 40.0%
! TACTTGACTACGTTTCTGGA+AGG - chr2_2:57164826-57164845 None:intergenic 40.0%
! ATTGTGAGAGCGTACAGTTA+AGG + chr2_2:57164964-57164983 Msa0259820:intron 40.0%
TTCTGTTTGTCTCCAACAAG+AGG + chr2_2:57164993-57165012 Msa0259820:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr2_2:57165255-57165274 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr2_2:57165293-57165312 Msa0259820:intron 40.0%
! AATTTTCCCTTCAAGAGTGG+GGG - chr2_2:57165385-57165404 None:intergenic 40.0%
! CAATTTTCCCTTCAAGAGTG+GGG - chr2_2:57165386-57165405 None:intergenic 40.0%
TCCCAATGATTCTATGTGCT+CGG + chr2_2:57165524-57165543 Msa0259820:intron 40.0%
TCCGAGCACATAGAATCATT+GGG - chr2_2:57165528-57165547 None:intergenic 40.0%
ATCCGAGCACATAGAATCAT+TGG - chr2_2:57165529-57165548 None:intergenic 40.0%
!! CATTCTTCTGAGATTGTGCA+TGG - chr2_2:57165557-57165576 None:intergenic 40.0%
TAAGACGGGGAAAAACTTGA+AGG - chr2_2:57165918-57165937 None:intergenic 40.0%
! TTTCCCCGTCTTAATGCTTT+TGG + chr2_2:57165925-57165944 Msa0259820:intron 40.0%
!! CTTCCAAAAGCATTAAGACG+GGG - chr2_2:57165931-57165950 None:intergenic 40.0%
ACTGTTTATGGCATGGCATA+AGG + chr2_2:57165981-57166000 Msa0259820:intron 40.0%
CATCAGCAATTCAGCATACA+AGG - chr2_2:57166275-57166294 None:intergenic 40.0%
GTGTGATTGGGCAAAGAATG+AGG - chr2_2:57161718-57161737 None:intergenic 45.0%
! ACTCTGAAGGTGGTGTGATT+GGG - chr2_2:57161730-57161749 None:intergenic 45.0%
! AACTCTGAAGGTGGTGTGAT+TGG - chr2_2:57161731-57161750 None:intergenic 45.0%
TTAACATTGTGCTTCGTGGG+TGG + chr2_2:57161992-57162011 Msa0259820:CDS 45.0%
GCTTCGTGGGTGGTATAAAT+TGG + chr2_2:57162002-57162021 Msa0259820:CDS 45.0%
! AGAGCCATTGGTGTTTCTCA+AGG + chr2_2:57162216-57162235 Msa0259820:intron 45.0%
TGCTTCTCAAGAAGTTTGCG+AGG + chr2_2:57162514-57162533 Msa0259820:intron 45.0%
TTCTCAAGAAGTTTGCGAGG+TGG + chr2_2:57162517-57162536 Msa0259820:intron 45.0%
TCTCAAGAAGTTTGCGAGGT+GGG + chr2_2:57162518-57162537 Msa0259820:intron 45.0%
GATTGATGCTCTTGTGGAGA+AGG + chr2_2:57162623-57162642 Msa0259820:intron 45.0%
TTGATGCTCTTGTGGAGAAG+GGG + chr2_2:57162625-57162644 Msa0259820:intron 45.0%
!! GGAGAAGGGGTTGATAGATA+TGG + chr2_2:57162638-57162657 Msa0259820:intron 45.0%
!! AGGGGTTGATAGATATGGCT+AGG + chr2_2:57162643-57162662 Msa0259820:intron 45.0%
TTTGTCCCCAACTCTTTCCT+CGG - chr2_2:57162711-57162730 None:intergenic 45.0%
TACGAACACGACTGAATGTG+AGG - chr2_2:57163059-57163078 None:intergenic 45.0%
CTGCACAGTATTGTGGAAAC+TGG - chr2_2:57163120-57163139 None:intergenic 45.0%
CTGTGCAGATTTGAACTGGT+TGG + chr2_2:57163132-57163151 Msa0259820:intron 45.0%
TGGCTTAAGTTTGGGCCAAT+TGG - chr2_2:57163348-57163367 None:intergenic 45.0%
GGAATCCTCCCTAATATCTG+TGG - chr2_2:57163368-57163387 None:intergenic 45.0%
! TCACTGTGCATTTTGTGCAC+TGG + chr2_2:57163458-57163477 Msa0259820:intron 45.0%
CATCCAAAGGCAACGGTTAT+CGG + chr2_2:57163526-57163545 Msa0259820:intron 45.0%
!! GCAGTTGATGGGAGTTTAAC+TGG + chr2_2:57163596-57163615 Msa0259820:intron 45.0%
! GTTGATGGGAGTTTAACTGG+TGG + chr2_2:57163599-57163618 Msa0259820:intron 45.0%
! GGAGTTTAACTGGTGGATGT+TGG + chr2_2:57163606-57163625 Msa0259820:intron 45.0%
TAGCTTCAGTAAGTGCTACC+TGG + chr2_2:57163716-57163735 Msa0259820:intron 45.0%
AGCTTCAGTAAGTGCTACCT+GGG + chr2_2:57163717-57163736 Msa0259820:intron 45.0%
! CAGAAAACATGGTTGGTGCA+TGG - chr2_2:57163913-57163932 None:intergenic 45.0%
TGTGGCATTAATTGCTGCTG+TGG - chr2_2:57164662-57164681 None:intergenic 45.0%
GCAGGATGAGATTGAATCTG+TGG - chr2_2:57164680-57164699 None:intergenic 45.0%
!! ATTTGCTGTTCCCATTGTGC+AGG - chr2_2:57164698-57164717 None:intergenic 45.0%
TGCACAATGGGAACAGCAAA+TGG + chr2_2:57164697-57164716 Msa0259820:intron 45.0%
GCACAATGGGAACAGCAAAT+GGG + chr2_2:57164698-57164717 Msa0259820:intron 45.0%
! CTTGACTACGTTTCTGGAAG+GGG - chr2_2:57164824-57164843 None:intergenic 45.0%
TAGGGTCCTACCAACTACAT+TGG + chr2_2:57164919-57164938 Msa0259820:intron 45.0%
TGTGCCCTAATTAAGCTTGG+TGG + chr2_2:57165020-57165039 Msa0259820:intron 45.0%
GTGCCCTAATTAAGCTTGGT+GGG + chr2_2:57165021-57165040 Msa0259820:intron 45.0%
! TGCCCTAATTAAGCTTGGTG+GGG + chr2_2:57165022-57165041 Msa0259820:intron 45.0%
TCCCCCACCAAGCTTAATTA+GGG - chr2_2:57165027-57165046 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr2_2:57165114-57165133 Msa0259820:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr2_2:57165115-57165134 Msa0259820:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr2_2:57165261-57165280 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr2_2:57165271-57165290 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr2_2:57165294-57165313 Msa0259820:intron 45.0%
! TGGTTAGTCCCACATTGACT+AGG + chr2_2:57165424-57165443 Msa0259820:intron 45.0%
! AGTCCCACATTGACTAGGAA+TGG + chr2_2:57165429-57165448 Msa0259820:intron 45.0%
CCTCCATTCCTAGTCAATGT+GGG - chr2_2:57165435-57165454 None:intergenic 45.0%
ACCTCCATTCCTAGTCAATG+TGG - chr2_2:57165436-57165455 None:intergenic 45.0%
CCAACCAATCCCGAAAATCT+TGG - chr2_2:57165495-57165514 None:intergenic 45.0%
!! CCAAGATTTTCGGGATTGGT+TGG + chr2_2:57165492-57165511 Msa0259820:intron 45.0%
! CAGGAGAAGCGCATAAATCA+AGG - chr2_2:57165811-57165830 None:intergenic 45.0%
GGAAGTCATCTGGATGTATG+TGG + chr2_2:57165946-57165965 Msa0259820:intron 45.0%
! TTATAGACTGAGAGAGGCAC+AGG - chr2_2:57166007-57166026 None:intergenic 45.0%
AAAGACCTAACAGCCAAGTG+AGG + chr2_2:57166339-57166358 Msa0259820:three_prime_UTR 45.0%
AAGACCTAACAGCCAAGTGA+GGG + chr2_2:57166340-57166359 Msa0259820:three_prime_UTR 45.0%
! TGGAACGTTGATGGGGTTGA+TGG + chr2_2:57161937-57161956 Msa0259820:CDS 50.0%
! GGAACGTTGATGGGGTTGAT+GGG + chr2_2:57161938-57161957 Msa0259820:CDS 50.0%
GTGGGTGGTATAAATTGGGG+TGG + chr2_2:57162007-57162026 Msa0259820:CDS 50.0%
GGTGGTATAAATTGGGGTGG+TGG + chr2_2:57162010-57162029 Msa0259820:CDS 50.0%
!! TGGGGTGGTGGAGTAAATGT+TGG + chr2_2:57162022-57162041 Msa0259820:CDS 50.0%
!! GGGGTGGTGGAGTAAATGTT+GGG + chr2_2:57162023-57162042 Msa0259820:CDS 50.0%
CTAAGAACCATGCGTCGTGA+TGG + chr2_2:57162366-57162385 Msa0259820:intron 50.0%
AGAACAACCATCACGACGCA+TGG - chr2_2:57162376-57162395 None:intergenic 50.0%
CTCAAGAAGTTTGCGAGGTG+GGG + chr2_2:57162519-57162538 Msa0259820:intron 50.0%
TCAAGAAGTTTGCGAGGTGG+GGG + chr2_2:57162520-57162539 Msa0259820:intron 50.0%
GCATTGTAAGCAGACGCATC+AGG - chr2_2:57162600-57162619 None:intergenic 50.0%
CCTAAGCCGAGGAAAGAGTT+GGG + chr2_2:57162702-57162721 Msa0259820:intron 50.0%
CTAAGCCGAGGAAAGAGTTG+GGG + chr2_2:57162703-57162722 Msa0259820:intron 50.0%
GAGGAAAGAGTTGGGGACAA+AGG + chr2_2:57162710-57162729 Msa0259820:intron 50.0%
AGAGTTGGGGACAAAGGTTC+TGG + chr2_2:57162716-57162735 Msa0259820:intron 50.0%
GAGTTGGGGACAAAGGTTCT+GGG + chr2_2:57162717-57162736 Msa0259820:intron 50.0%
AATGCACAGTGAAGCCCTTC+AGG - chr2_2:57163450-57163469 None:intergenic 50.0%
!! TGTGCATTTTGTGCACTGGC+AGG + chr2_2:57163462-57163481 Msa0259820:intron 50.0%
!! ATTTTGTGCACTGGCAGGCA+GGG + chr2_2:57163467-57163486 Msa0259820:intron 50.0%
! GTTATCGGCTGCAGAAGACA+AGG + chr2_2:57163541-57163560 Msa0259820:intron 50.0%
CAGCCGATAACTGTTGCCTT+TGG - chr2_2:57163644-57163663 None:intergenic 50.0%
! GTTATCGGCTGCAGAAGACA+AGG + chr2_2:57163541-57163560 Msa0259820:intron 50.0%
TTTGGGAGGTTCTGCTGAGT+TGG - chr2_2:57164178-57164197 None:intergenic 50.0%
!! GGATTCTTCGATTGGCTCGT+CGG - chr2_2:57164562-57164581 None:intergenic 50.0%
AATTGCTGCTGTGGAGCTTG+TGG - chr2_2:57164653-57164672 None:intergenic 50.0%
AGGGCACAAATGCCTCTTGT+TGG - chr2_2:57165008-57165027 None:intergenic 50.0%
! GCCCTAATTAAGCTTGGTGG+GGG + chr2_2:57165023-57165042 Msa0259820:intron 50.0%
CTCCCCCACCAAGCTTAATT+AGG - chr2_2:57165028-57165047 None:intergenic 50.0%
! AATTAAGCTTGGTGGGGGAG+CGG + chr2_2:57165028-57165047 Msa0259820:intron 50.0%
GTGGATCCTAGTGTGGATCA+AGG + chr2_2:57165053-57165072 Msa0259820:intron 50.0%
!! CACTAGCCTTGATCCACACT+AGG - chr2_2:57165062-57165081 None:intergenic 50.0%
GTGGATCAAGGCTAGTGATG+TGG + chr2_2:57165065-57165084 Msa0259820:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr2_2:57165116-57165135 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr2_2:57165113-57165132 Msa0259820:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2_2:57165119-57165138 Msa0259820:intron 50.0%
! CCCACATTGACTAGGAATGG+AGG + chr2_2:57165432-57165451 Msa0259820:intron 50.0%
ATCACCCTCACTTGGCTGTT+AGG - chr2_2:57166347-57166366 None:intergenic 50.0%
AACAGCCAAGTGAGGGTGAT+TGG + chr2_2:57166347-57166366 Msa0259820:three_prime_UTR 50.0%
TCTTGCCAATCACCCTCACT+TGG - chr2_2:57166355-57166374 None:intergenic 50.0%
AGCGTCGTCGACACAATGAG+CGG - chr2_2:57161773-57161792 None:intergenic 55.0%
TGTCGAAAGGTGGGAAGCCA+TGG + chr2_2:57162118-57162137 Msa0259820:CDS 55.0%
GAGTGGGGTTCGTCCTACTA+TGG + chr2_2:57162479-57162498 Msa0259820:intron 55.0%
GAGGTGGGGGTTTCTTCGAT+TGG + chr2_2:57162533-57162552 Msa0259820:intron 55.0%
AAGGACTTTCGCCTAAGCCG+AGG + chr2_2:57162691-57162710 Msa0259820:intron 55.0%
GCCTAAGCCGAGGAAAGAGT+TGG + chr2_2:57162701-57162720 Msa0259820:intron 55.0%
CCCAACTCTTTCCTCGGCTT+AGG - chr2_2:57162705-57162724 None:intergenic 55.0%
!! TTGGGGACAAAGGTTCTGGG+AGG + chr2_2:57162720-57162739 Msa0259820:intron 55.0%
TCTGGGAGGAGAATCTGTCG+AGG + chr2_2:57162734-57162753 Msa0259820:intron 55.0%
TTGCAATGGGAGGGCCTGAA+GGG + chr2_2:57163433-57163452 Msa0259820:intron 55.0%
!! CATTTTGTGCACTGGCAGGC+AGG + chr2_2:57163466-57163485 Msa0259820:intron 55.0%
CAGCCGATAACCGTTGCCTT+TGG - chr2_2:57163532-57163551 None:intergenic 55.0%
GTGGCAAATGCTTCAGGCAC+CGG + chr2_2:57164736-57164755 Msa0259820:intron 55.0%
TGGCAAATGCTTCAGGCACC+GGG + chr2_2:57164737-57164756 Msa0259820:intron 55.0%
! ATTAAGCTTGGTGGGGGAGC+GGG + chr2_2:57165029-57165048 Msa0259820:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr2_2:57165121-57165140 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2_2:57165127-57165146 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr2_2:57165128-57165147 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr2_2:57165127-57165146 Msa0259820:intron 55.0%
GTGCTACCCCCACTCTTGAA+GGG + chr2_2:57165376-57165395 Msa0259820:intron 55.0%
CTTGCAATGGGAGGGCCTGA+AGG + chr2_2:57163432-57163451 Msa0259820:intron 60.0%
AGCGGGAGTGGATCCTAGTG+TGG + chr2_2:57165046-57165065 Msa0259820:intron 60.0%
! GGTGCTACCCCCACTCTTGA+AGG + chr2_2:57165375-57165394 Msa0259820:intron 60.0%
!! GGAGGCATCCCGATACCAGA+AGG - chr2_2:57165585-57165604 None:intergenic 60.0%
!! GATTGGCTCGTCGGCACGCC+TGG - chr2_2:57164553-57164572 None:intergenic 70.0%
! GCTTGGTGGGGGAGCGGGAG+TGG + chr2_2:57165034-57165053 Msa0259820:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 57161703 57166497 57161703 ID=Msa0259820;Name=Msa0259820
chr2_2 mRNA 57161703 57166497 57161703 ID=Msa0259820-mRNA-1;Parent=Msa0259820;Name=Msa0259820-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0|0.33|1|0|0|3|307|163
chr2_2 exon 57161703 57161903 57161703 ID=Msa0259820-mRNA-1:exon:17313;Parent=Msa0259820-mRNA-1
chr2_2 exon 57161922 57162154 57161922 ID=Msa0259820-mRNA-1:exon:17314;Parent=Msa0259820-mRNA-1
chr2_2 exon 57166133 57166497 57166133 ID=Msa0259820-mRNA-1:exon:17315;Parent=Msa0259820-mRNA-1
chr2_2 CDS 57161703 57161903 57161703 ID=Msa0259820-mRNA-1:cds;Parent=Msa0259820-mRNA-1
chr2_2 CDS 57161922 57162154 57161922 ID=Msa0259820-mRNA-1:cds;Parent=Msa0259820-mRNA-1
chr2_2 CDS 57166133 57166190 57166133 ID=Msa0259820-mRNA-1:cds;Parent=Msa0259820-mRNA-1
chr2_2 three_prime_UTR 57166191 57166497 57166191 ID=Msa0259820-mRNA-1:three_prime_utr;Parent=Msa0259820-mRNA-1
Gene Sequence

>Msa0259820

ATGCGTCAAAACCCTCATTCTTTGCCCAATCACACCACCTTCAGAGTTATGTTCAAACGTTACGTATCCGCTCATTGTGTCGACGACGCTGTTAGCACTTTTCAACGTCTCAATGAGTTCAATTTGAAAGATGAAACTTCCTTTTCAAATCTCATTGATGCGCTTTGTGAGTATAAACATGTTCTTGAAGCTCAAGATTTGATTCAAACTTTAACTTGGAACGTTGATGGGGTTGATGGGTTTGTTGTGAGTTGTAAAAATACTAAAATTTTTAACATTGTGCTTCGTGGGTGGTATAAATTGGGGTGGTGGAGTAAATGTTGGGAGTTTTGGGATGAAATGGATAGAAAAGGGGTTGAAAAGGATTTGCATTCGTATTCAATTTATATGGATATTTTGTCGAAAGGTGGGAAGCCATGGAAAGCTGTGAAATTAATAAAGTCAACATTGGAAGCTGCAGTATTGCTTGAATCAATTGTTTTCATACATTAG
Protein sequence

>Msa0259820

MRQNPHSLPNHTTFRVMFKRYVSAHCVDDAVSTFQRLNEFNLKDETSFSNLIDALCEYKHVLEAQDLIQTLTWNVDGVDGFVVSCKNTKIFNIVLRGWYKLGWWSKCWEFWDEMDRKGVEKDLHSYSIYMDILSKGGKPWKAVKLIKSTLEAAVLLESIVFIH*