AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0305390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305390 MtrunA17_Chr2g0333551 79.872 313 50 3 1 308 28 332 1.49e-171 485
Msa0305390 MtrunA17_Chr2g0333551 36.735 245 116 6 80 317 266 478 3.28e-33 128
Msa0305390 MtrunA17_Chr7g0252871 30.068 296 161 6 47 311 134 414 1.27e-35 135
Msa0305390 MtrunA17_Chr1g0208371 30.372 349 180 11 9 311 37 368 7.04e-34 130
Msa0305390 MtrunA17_Chr3g0125131 27.852 298 170 5 42 311 61 341 7.95e-33 127
Msa0305390 MtrunA17_Chr3g0143411 26.012 346 183 8 20 308 56 385 1.31e-30 121
Msa0305390 MtrunA17_Chr4g0020821 30.112 269 164 7 43 308 264 511 5.34e-29 117
Msa0305390 MtrunA17_Chr4g0020841 29.455 275 168 8 30 299 72 325 7.09e-29 115
Msa0305390 MtrunA17_Chr2g0308441 29.762 252 150 6 47 285 100 337 1.04e-28 115
Msa0305390 MtrunA17_Chr3g0118171 26.171 363 193 12 13 325 18 355 4.17e-26 108
Msa0305390 MtrunA17_Chr8g0369501 27.778 270 164 6 61 308 131 391 8.64e-25 105
Msa0305390 MtrunA17_Chr8g0390041 25.993 277 161 4 61 308 90 351 2.72e-22 97.4
Msa0305390 MtrunA17_Chr5g0394721 27.138 269 169 5 42 308 132 375 4.73e-22 96.7
Msa0305390 MtrunA17_Chr8g0387521 24.611 321 184 8 21 308 68 363 1.29e-20 92.4
Msa0305390 MtrunA17_Chr1g0176951 25.843 267 163 7 51 294 93 347 1.46e-20 92.0
Msa0305390 MtrunA17_Chr2g0284291 28.794 257 157 7 50 305 188 419 4.86e-20 90.9
Msa0305390 MtrunA17_Chr2g0316951 31.000 200 113 6 113 308 9 187 5.13e-20 88.2
Msa0305390 MtrunA17_Chr3g0079211 26.644 289 157 9 59 308 76 348 6.41e-20 90.1
Msa0305390 MtrunA17_Chr7g0225741 25.468 267 164 7 51 294 93 347 7.20e-20 90.1
Msa0305390 MtrunA17_Chr1g0194281 26.619 278 156 6 60 308 76 334 9.12e-19 87.0
Msa0305390 MtrunA17_Chr6g0471201 24.900 249 163 5 61 308 189 414 2.19e-18 85.9
Msa0305390 MtrunA17_Chr6g0482751 25.333 300 167 7 59 306 254 548 2.71e-18 85.5
Msa0305390 MtrunA17_Chr8g0368891 27.778 234 137 7 80 308 418 624 1.88e-17 83.2
Msa0305390 MtrunA17_Chr8g0368871 29.703 202 111 7 112 308 8 183 4.71e-17 79.0
Msa0305390 MtrunA17_Chr1g0148741 24.038 312 198 8 23 325 89 370 1.18e-16 80.9
Msa0305390 MtrunA17_Chr3g0093791 24.818 274 175 6 57 308 319 583 1.22e-16 80.9
Msa0305390 MtrunA17_Chr1g0203271 24.232 293 165 7 59 308 154 432 1.56e-16 80.1
Msa0305390 MtrunA17_Chr7g0276351 24.085 328 172 5 44 308 42 355 1.76e-16 79.7
Msa0305390 MtrunA17_Chr8g0391651 26.786 280 158 5 77 328 241 501 1.87e-16 80.1
Msa0305390 MtrunA17_Chr1g0210801 21.852 270 180 6 67 314 126 386 1.91e-16 80.1
Msa0305390 MtrunA17_Chr2g0330371 26.613 248 149 8 64 308 122 339 4.08e-16 79.0
Msa0305390 MtrunA17_Chr5g0446031 26.459 257 146 6 80 308 414 655 6.10e-16 79.0
Msa0305390 MtrunA17_Chr5g0446031 22.764 246 166 5 57 301 112 334 2.26e-11 65.1
Msa0305390 MtrunA17_Chr6g0473431 26.754 228 138 6 80 305 272 472 7.68e-16 78.2
Msa0305390 MtrunA17_Chr3g0111441 23.659 317 202 9 19 308 38 341 1.12e-15 77.4
Msa0305390 MtrunA17_Chr1g0171281 25.098 255 148 6 80 306 305 544 2.49e-15 76.6
Msa0305390 MtrunA17_Chr1g0171281 23.711 291 163 6 54 308 139 406 1.46e-11 65.1
Msa0305390 MtrunA17_Chr6g0473351 26.316 228 139 6 80 305 269 469 2.77e-15 76.6
Msa0305390 MtrunA17_Chr6g0480621 26.578 301 163 10 47 308 150 431 2.99e-15 76.6
Msa0305390 MtrunA17_Chr6g0482541 26.190 252 159 7 59 308 24 250 3.17e-15 75.9
Msa0305390 MtrunA17_Chr6g0482541 26.210 248 158 6 59 305 94 317 7.91e-15 74.7
Msa0305390 MtrunA17_Chr1g0147171 24.000 275 174 7 61 311 198 461 3.32e-15 76.3
Msa0305390 MtrunA17_Chr3g0136851 24.590 305 177 7 41 308 786 1074 4.01e-15 76.6
Msa0305390 MtrunA17_Chr3g0136851 22.590 332 171 8 61 308 219 548 8.11e-15 75.5
Msa0305390 MtrunA17_Chr4g0060641 24.000 300 192 8 49 325 11 297 5.78e-15 75.9
Msa0305390 MtrunA17_Chr4g0030691 24.762 315 189 12 20 321 25 304 6.26e-15 75.1
Msa0305390 MtrunA17_Chr6g0477511 26.087 276 164 9 59 308 231 492 8.62e-15 75.1
Msa0305390 MtrunA17_Chr6g0472611 26.201 229 145 5 80 307 275 480 9.20e-15 75.1
Msa0305390 MtrunA17_Chr1g0168761 27.381 252 152 7 61 308 173 397 1.28e-14 74.3
Msa0305390 MtrunA17_Chr1g0168761 28.287 251 145 10 80 306 296 535 3.35e-13 70.1
Msa0305390 MtrunA17_Chr8g0359551 24.324 296 181 10 42 308 104 385 1.63e-14 74.3
Msa0305390 MtrunA17_Chr1g0200211 26.887 212 127 5 112 322 209 393 2.54e-14 73.9
Msa0305390 MtrunA17_Chr6g0449581 25.658 304 176 9 47 308 107 402 2.75e-14 73.6
Msa0305390 MtrunA17_Chr2g0282801 24.046 262 172 7 51 308 21 259 3.40e-14 73.2
Msa0305390 MtrunA17_Chr6g0481991 25.564 266 171 7 43 305 267 508 4.20e-14 73.2
Msa0305390 MtrunA17_Chr6g0482921 23.793 290 143 7 80 306 12 286 5.41e-14 71.2
Msa0305390 MtrunA17_Chr6g0473031 25.991 227 144 5 80 305 283 486 7.36e-14 72.4
Msa0305390 MtrunA17_Chr6g0482611 26.295 251 160 6 59 308 190 416 8.34e-14 72.0
Msa0305390 MtrunA17_Chr6g0482611 23.661 224 125 4 113 306 347 554 3.55e-12 67.0
Msa0305390 MtrunA17_Chr7g0265721 21.639 305 210 8 19 308 135 425 8.99e-14 72.0
Msa0305390 MtrunA17_Chr6g0481971 25.439 228 116 7 113 306 335 542 1.16e-13 71.6
Msa0305390 MtrunA17_Chr2g0331911 23.053 321 191 7 41 308 228 545 1.63e-13 71.2
Msa0305390 MtrunA17_Chr7g0246931 24.314 255 169 5 58 311 261 492 2.11e-13 70.9
Msa0305390 MtrunA17_Chr6g0482571 26.693 251 153 8 59 305 112 335 2.90e-13 70.1
Msa0305390 MtrunA17_Chr6g0482571 26.119 268 157 8 59 308 24 268 9.47e-13 68.6
Msa0305390 MtrunA17_Chr7g0218641 24.891 229 148 5 80 307 271 476 3.26e-13 70.1
Msa0305390 MtrunA17_Chr8g0375231 25.694 288 172 8 40 308 93 357 3.30e-13 70.5
Msa0305390 MtrunA17_Chr3g0085871 23.899 318 197 10 37 327 114 413 3.55e-13 70.5
Msa0305390 MtrunA17_Chr6g0481621 25.498 251 162 7 59 308 207 433 4.35e-13 70.1
Msa0305390 MtrunA17_Chr6g0481621 24.125 257 148 5 80 306 332 571 1.97e-12 67.8
Msa0305390 MtrunA17_Chr6g0478291 25.301 249 159 7 59 305 256 479 5.24e-13 69.7
Msa0305390 MtrunA17_Chr6g0478291 25.862 232 144 6 78 306 344 550 2.23e-11 64.7
Msa0305390 MtrunA17_Chr8g0334641 30.818 159 88 3 150 308 236 372 5.57e-13 69.3
Msa0305390 MtrunA17_Chr6g0479541 26.087 230 146 5 80 308 367 573 7.85e-13 69.3
Msa0305390 MtrunA17_Chr2g0292711 27.439 164 93 3 147 308 394 533 8.72e-13 68.9
Msa0305390 MtrunA17_Chr7g0231941 25.185 270 178 7 42 308 83 331 1.32e-12 68.6
Msa0305390 MtrunA17_Chr3g0143851 24.424 217 140 6 93 308 401 594 1.78e-12 68.2
Msa0305390 MtrunA17_Chr4g0038401 24.670 227 143 5 89 314 687 886 2.20e-12 68.2
Msa0305390 MtrunA17_Chr4g0033981 23.904 251 160 6 80 308 359 600 2.28e-12 67.8
Msa0305390 MtrunA17_Chr4g0033981 25.862 232 139 8 59 285 409 612 3.92e-12 67.0
Msa0305390 MtrunA17_Chr6g0458411 24.359 234 151 7 77 308 303 512 2.51e-12 67.8
Msa0305390 MtrunA17_Chr6g0482821 25.100 251 163 6 59 308 188 414 3.15e-12 67.4
Msa0305390 MtrunA17_Chr6g0482821 23.279 305 167 8 59 306 258 552 3.42e-12 67.0
Msa0305390 MtrunA17_Chr6g0482601 25.100 251 163 6 59 308 97 323 3.42e-12 67.0
Msa0305390 MtrunA17_Chr6g0482601 23.279 305 167 8 59 306 167 461 4.29e-12 66.6
Msa0305390 MtrunA17_Chr6g0473151 25.287 261 150 8 80 306 224 473 3.46e-12 67.0
Msa0305390 MtrunA17_Chr6g0482791 26.768 198 116 5 112 305 299 471 3.56e-12 67.0
Msa0305390 MtrunA17_Chr5g0442231 29.362 235 131 8 112 325 268 488 4.62e-12 67.0
Msa0305390 MtrunA17_Chr6g0482561 24.885 217 133 6 112 306 180 388 4.90e-12 66.2
Msa0305390 MtrunA17_Chr6g0482561 22.344 273 178 7 59 308 24 285 1.49e-11 64.7
Msa0305390 MtrunA17_Chr1g0166071 22.433 263 183 4 58 308 122 375 5.31e-12 67.0
Msa0305390 MtrunA17_Chr6g0473261 25.397 252 151 7 80 306 352 591 5.44e-12 66.6
Msa0305390 MtrunA17_Chr1g0170071 23.047 256 168 6 56 308 597 826 5.76e-12 66.6
Msa0305390 MtrunA17_Chr6g0482661 23.556 225 126 4 112 306 43 251 5.94e-12 64.7
Msa0305390 MtrunA17_Chr6g0471871 24.017 229 150 5 80 307 280 485 7.61e-12 66.2
Msa0305390 MtrunA17_Chr6g0471871 27.273 220 124 7 112 306 346 554 5.32e-11 63.5
Msa0305390 MtrunA17_Chr6g0482651 22.870 223 130 3 112 306 332 540 8.58e-12 65.9
Msa0305390 MtrunA17_Chr6g0478011 23.790 248 164 6 59 305 68 291 9.39e-12 65.1
Msa0305390 MtrunA17_Chr6g0471531 24.464 233 152 5 80 311 291 500 9.39e-12 65.9
Msa0305390 MtrunA17_Chr6g0473491 24.031 258 147 7 80 306 304 543 1.01e-11 65.9
Msa0305390 MtrunA17_Chr6g0482901 26.244 221 125 7 112 306 346 554 1.11e-11 65.5
Msa0305390 MtrunA17_Chr6g0482901 26.087 230 140 6 80 305 280 483 2.36e-11 64.7
Msa0305390 MtrunA17_Chr4g0058401 22.697 304 183 8 39 309 225 509 1.41e-11 65.5
Msa0305390 MtrunA17_Chr6g0478271 25.121 207 109 4 130 306 11 201 1.65e-11 62.8
Msa0305390 MtrunA17_Chr6g0473481 25.397 252 151 7 80 306 304 543 1.70e-11 65.1
Msa0305390 MtrunA17_Chr6g0473511 25.397 252 151 7 80 306 304 543 1.70e-11 65.1
Msa0305390 MtrunA17_Chr4g0050481 20.833 288 163 5 42 325 67 293 1.78e-11 64.7
Msa0305390 MtrunA17_Chr2g0285331 21.459 233 158 4 80 310 339 548 1.91e-11 65.1
Msa0305390 MtrunA17_Chr2g0285331 25.651 269 168 7 42 305 162 403 4.42e-11 63.9
Msa0305390 MtrunA17_Chr4g0019851 25.389 193 117 4 116 307 200 366 2.30e-11 64.7
Msa0305390 MtrunA17_Chr3g0138511 21.831 284 188 7 55 326 89 350 2.38e-11 64.3
Msa0305390 MtrunA17_Chr6g0473441 23.348 227 150 5 80 305 269 472 2.84e-11 64.3
Msa0305390 MtrunA17_Chr5g0417961 23.282 262 181 5 58 308 122 374 3.02e-11 64.3
Msa0305390 MtrunA17_Chr5g0417961 23.368 291 189 10 42 308 302 582 3.75e-11 64.3
Msa0305390 MtrunA17_Chr6g0473241 26.496 234 138 8 95 306 322 543 3.83e-11 63.9
Msa0305390 MtrunA17_Chr5g0418931 25.306 245 156 7 64 306 90 309 5.37e-11 63.5
Msa0305390 MtrunA17_Chr1g0176791 21.549 297 183 6 61 308 184 479 5.53e-11 63.9
Msa0305390 MtrunA17_Chr6g0471481 24.454 229 138 5 80 307 95 289 5.68e-11 62.4
Msa0305390 MtrunA17_Chr4g0059641 25.688 218 132 5 111 306 112 321 6.89e-11 62.4
Msa0305390 MtrunA17_Chr6g0477361 24.454 229 149 5 81 308 2 207 7.95e-11 62.4
Msa0305390 MtrunA17_Chr6g0482771 25.833 240 137 7 80 291 269 495 8.47e-11 62.8
Msa0305390 MtrunA17_Chr2g0296811 29.560 159 90 3 150 308 12 148 8.87e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0305390 AT1G80550.1 47.678 323 126 6 15 308 19 327 5.10e-97 294
Msa0305390 AT1G80550.1 33.333 150 70 2 196 318 293 439 6.85e-18 84.3
Msa0305390 AT5G15010.1 32.542 295 154 6 47 311 130 409 2.34e-34 132
Msa0305390 AT1G74900.1 27.778 288 175 7 44 308 56 333 3.58e-29 116
Msa0305390 AT1G77360.2 26.174 298 175 7 42 311 62 342 2.93e-26 108
Msa0305390 AT1G77360.1 26.174 298 175 7 42 311 98 378 4.91e-26 108
Msa0305390 AT1G71060.1 26.174 298 176 5 42 311 92 373 2.18e-24 103
Msa0305390 AT1G20300.1 26.087 299 171 7 40 304 107 389 6.16e-24 102
Msa0305390 AT3G15200.1 29.921 254 153 6 56 308 121 350 3.28e-23 100
Msa0305390 AT5G65820.1 24.765 319 196 6 19 308 87 390 7.07e-23 99.8
Msa0305390 AT1G52640.1 28.514 249 155 5 61 308 85 311 2.03e-22 98.2
Msa0305390 AT3G49730.1 25.397 315 200 10 19 308 71 375 5.17e-21 94.4
Msa0305390 AT4G01400.1 23.288 365 220 8 1 308 2 363 1.36e-20 92.4
Msa0305390 AT3G60050.2 26.019 319 188 10 12 308 65 357 1.59e-20 92.4
Msa0305390 AT3G60050.1 26.019 319 188 10 12 308 65 357 1.59e-20 92.4
Msa0305390 AT3G04130.1 27.719 285 170 8 47 307 90 362 2.70e-20 91.7
Msa0305390 AT3G04130.2 27.719 285 170 8 47 307 90 362 2.70e-20 91.7
Msa0305390 AT1G55630.1 25.472 318 191 10 12 308 68 360 7.68e-20 90.5
Msa0305390 AT3G22670.1 25.685 292 178 8 42 306 130 409 8.79e-19 87.4
Msa0305390 AT3G62470.1 25.000 260 169 5 50 308 167 401 7.84e-18 84.7
Msa0305390 AT1G18900.4 25.455 275 174 6 56 308 342 607 8.28e-18 84.7
Msa0305390 AT1G18900.2 25.455 275 174 6 56 308 342 607 8.28e-18 84.7
Msa0305390 AT1G18900.1 25.455 275 174 6 56 308 342 607 8.28e-18 84.7
Msa0305390 AT1G18900.3 25.455 275 174 6 56 308 342 607 8.84e-18 84.7
Msa0305390 AT3G62540.1 25.000 260 169 5 50 308 167 401 1.11e-17 84.3
Msa0305390 AT5G14820.1 25.000 260 169 5 50 308 166 400 1.77e-17 83.6
Msa0305390 AT1G80880.3 25.175 286 162 9 54 308 133 397 1.99e-17 83.6
Msa0305390 AT1G80880.2 25.175 286 162 9 54 308 133 397 1.99e-17 83.6
Msa0305390 AT1G80880.1 25.175 286 162 9 54 308 133 397 1.99e-17 83.6
Msa0305390 AT1G74750.2 24.910 277 173 6 56 308 337 602 3.86e-17 82.8
Msa0305390 AT1G74750.1 24.910 277 173 6 56 308 337 602 3.86e-17 82.8
Msa0305390 AT1G74750.4 24.910 277 173 6 56 308 337 602 3.86e-17 82.8
Msa0305390 AT1G74750.3 24.910 277 173 6 56 308 337 602 3.86e-17 82.8
Msa0305390 AT1G02420.1 26.619 278 157 5 60 308 90 349 6.23e-17 81.6
Msa0305390 AT1G77405.1 24.679 312 174 10 40 309 96 388 1.05e-16 80.9
Msa0305390 AT2G31400.2 25.000 240 156 6 70 308 366 582 1.01e-15 78.6
Msa0305390 AT2G31400.1 25.000 240 156 6 70 308 366 582 1.24e-15 78.2
Msa0305390 AT5G43820.1 27.236 246 154 7 64 308 137 358 1.31e-15 77.8
Msa0305390 AT1G79540.1 27.225 191 116 4 112 301 231 399 1.75e-15 77.8
Msa0305390 AT1G62720.1 23.297 279 185 8 31 308 62 312 2.72e-15 77.0
Msa0305390 AT2G35130.3 22.180 266 173 7 67 308 144 399 3.21e-15 77.0
Msa0305390 AT3G06920.2 23.643 258 152 6 80 308 393 634 3.30e-15 77.0
Msa0305390 AT3G06920.3 23.643 258 152 6 80 308 393 634 3.30e-15 77.0
Msa0305390 AT3G06920.1 23.643 258 152 6 80 308 379 620 3.54e-15 77.0
Msa0305390 AT2G35130.2 20.727 275 181 7 67 314 166 430 8.77e-15 75.5
Msa0305390 AT2G35130.1 21.190 269 175 7 67 308 144 402 8.91e-15 75.5
Msa0305390 AT5G11310.1 25.357 280 160 9 65 308 122 388 1.23e-14 75.1
Msa0305390 AT4G31850.1 26.437 261 143 8 80 308 822 1065 5.47e-14 73.6
Msa0305390 AT3G16010.1 24.907 269 177 5 42 308 91 336 8.44e-14 72.8
Msa0305390 AT4G20090.2 23.276 232 154 5 77 307 256 464 1.08e-13 72.4
Msa0305390 AT4G20090.2 23.887 247 163 6 80 325 329 551 1.34e-13 72.0
Msa0305390 AT4G20090.2 26.667 240 149 7 74 308 73 290 2.83e-13 70.9
Msa0305390 AT4G20090.1 23.276 232 154 5 77 307 256 464 1.08e-13 72.4
Msa0305390 AT4G20090.1 23.887 247 163 6 80 325 329 551 1.34e-13 72.0
Msa0305390 AT4G20090.1 26.667 240 149 7 74 308 73 290 2.83e-13 70.9
Msa0305390 AT3G61360.1 21.495 321 200 7 18 308 50 348 1.52e-13 71.6
Msa0305390 AT5G41170.3 23.305 236 154 6 70 301 139 351 1.97e-13 71.2
Msa0305390 AT3G07290.1 23.577 246 164 6 57 301 245 467 1.99e-13 71.6
Msa0305390 AT3G04760.2 25.106 235 147 6 80 308 160 371 2.07e-13 71.2
Msa0305390 AT1G03560.1 22.745 255 173 6 55 308 305 536 2.49e-13 71.2
Msa0305390 AT1G03560.1 20.921 239 165 5 71 308 180 395 2.99e-11 64.7
Msa0305390 AT5G41170.1 23.305 236 154 6 70 301 239 451 2.53e-13 70.9
Msa0305390 AT5G41170.2 23.305 236 154 6 70 301 239 451 3.46e-13 70.5
Msa0305390 AT3G04760.1 23.729 236 156 5 74 308 189 401 3.58e-13 70.5
Msa0305390 AT1G12300.1 23.404 282 177 8 36 311 156 404 4.18e-13 70.5
Msa0305390 AT4G11690.1 22.677 269 178 7 61 328 113 352 4.79e-13 70.1
Msa0305390 AT5G39980.1 24.409 254 159 7 49 298 126 350 7.93e-13 69.7
Msa0305390 AT5G39980.1 23.506 251 167 6 57 306 240 466 8.94e-12 66.6
Msa0305390 AT1G62680.1 25.110 227 146 6 80 305 122 325 1.24e-12 68.9
Msa0305390 AT1G62680.2 25.110 227 146 6 80 305 122 325 1.24e-12 68.9
Msa0305390 AT5G64320.1 23.377 231 151 6 80 308 426 632 1.87e-12 68.6
Msa0305390 AT1G02060.1 23.504 234 162 5 80 310 246 465 2.54e-12 68.2
Msa0305390 AT2G39230.1 24.000 250 166 5 60 308 572 798 2.63e-12 68.2
Msa0305390 AT1G26500.1 25.000 288 183 8 28 306 54 317 2.67e-12 67.8
Msa0305390 AT5G59900.1 24.314 255 155 8 63 308 350 575 3.67e-12 67.8
Msa0305390 AT3G16710.2 25.126 199 124 6 112 308 151 326 4.20e-12 67.0
Msa0305390 AT5G04810.1 23.137 255 171 6 55 308 602 832 5.20e-12 67.4
Msa0305390 AT3G16710.1 25.126 199 124 6 112 308 151 326 5.20e-12 67.0
Msa0305390 AT4G11690.2 25.806 186 112 4 143 328 166 325 8.53e-12 66.2
Msa0305390 AT5G18475.1 22.581 279 184 9 36 311 230 479 8.88e-12 66.2
Msa0305390 AT5G12100.1 24.123 228 149 5 80 306 356 560 9.42e-12 66.6
Msa0305390 AT2G17670.1 28.431 204 118 7 109 308 189 368 1.16e-11 65.9
Msa0305390 AT4G26680.2 23.123 333 191 10 42 328 79 392 2.41e-11 65.1
Msa0305390 AT4G26680.1 23.123 333 191 10 42 328 79 392 2.41e-11 65.1
Msa0305390 AT5G42310.1 22.581 217 144 5 93 308 424 617 3.50e-11 64.7
Msa0305390 AT1G63330.3 24.567 289 183 10 43 325 77 336 3.99e-11 64.3
Msa0305390 AT1G63330.1 24.567 289 183 10 43 325 77 336 3.99e-11 64.3
Msa0305390 AT1G63330.2 24.567 289 183 10 43 325 77 336 3.99e-11 64.3
Msa0305390 AT3G09060.2 23.490 298 171 7 50 308 113 392 7.58e-11 63.5
Msa0305390 AT3G09060.1 23.490 298 171 7 50 308 113 392 7.58e-11 63.5
Msa0305390 AT1G53330.1 24.400 250 164 6 60 308 101 326 9.75e-11 63.2

Find 101 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTATTTCTTGGGCAAAT+TGG 0.181459 2_3:-63039893 Msa0305390:three_prime_UTR
ACTTTCTCATCTTTATTTCT+TGG 0.185616 2_3:-63039902 Msa0305390:three_prime_UTR
GAAAGCTGTGAAATTGTTTA+AGG 0.193437 2_3:-63044137 Msa0305390:CDS
GCTTCGTGGGTGGTATAAAT+TGG 0.252895 2_3:-63044275 Msa0305390:CDS
TCCACGAAGGAAATTGAATT+AGG 0.264056 2_3:+63044778 None:intergenic
ACTGAAAATTGTCAAATAAA+TGG 0.270273 2_3:-63039862 Msa0305390:three_prime_UTR
ATGGAATGCTCACTAGTTAA+TGG 0.270434 2_3:-63039805 Msa0305390:three_prime_UTR
GCATTCGTATTCAATTTATA+TGG 0.274776 2_3:-63044188 Msa0305390:CDS
GGAGTAAATGTTGGGAGTTT+TGG 0.278811 2_3:-63044246 Msa0305390:CDS
CTTTATTTCTTGGGCAAATT+GGG 0.291832 2_3:-63039892 Msa0305390:three_prime_UTR
CTTTCTCATCTTTATTTCTT+GGG 0.295074 2_3:-63039901 Msa0305390:three_prime_UTR
AAGGAAATTGAATTAGGGTT+AGG 0.311622 2_3:+63044784 None:intergenic
AACCTTGTACTCGACATTCT+TGG 0.328917 2_3:-63044640 Msa0305390:CDS
TGTTCTTGAAGCTCAAGATT+TGG 0.339499 2_3:-63044395 Msa0305390:CDS
CTTCGTGGGTGGTATAAATT+GGG 0.339735 2_3:-63044274 Msa0305390:CDS
TAGGGTTGCACGAACGGTTG+TGG 0.360712 2_3:+63044753 None:intergenic
CCCTAATTCAATTTCCTTCG+TGG 0.365686 2_3:-63044779 Msa0305390:CDS
AATCGTTGTTGAAGGAGGTT+AGG 0.374081 2_3:+63044734 None:intergenic
AGGGTTGCACGAACGGTTGT+GGG 0.381064 2_3:+63044754 None:intergenic
AACTCTGAAGGTGGTGTGAT+TGG 0.384447 2_3:+63044549 None:intergenic
GCGCTTTAGAATTCTTCAAT+TGG 0.387897 2_3:-63044705 Msa0305390:CDS
CTTTAACTTGGAACGTTGAT+GGG 0.391343 2_3:-63044348 Msa0305390:CDS
ATCACCCTCACTTGGCTGTT+AGG 0.392014 2_3:+63039956 None:intergenic
ATATATCGTTGTAGATTCTC+TGG 0.392327 2_3:-63039994 Msa0305390:three_prime_UTR
CGCTTTAGAATTCTTCAATT+GGG 0.394998 2_3:-63044704 Msa0305390:CDS
ACTTTAACTTGGAACGTTGA+TGG 0.399647 2_3:-63044349 Msa0305390:CDS
GGAGTGTTGGAATTTATATT+CGG 0.401622 2_3:+63044675 None:intergenic
GGGATGAAATGGATAGAAAA+GGG 0.413353 2_3:-63044225 Msa0305390:CDS
GGAGAAGGGGTTGATAGATA+TGG 0.413810 2_3:-63043639 Msa0305390:CDS
TGGCGAGCTGAAAGGAGAAT+TGG 0.415488 2_3:+63044874 None:intergenic
AACAGCCAAGTGAGGGTGAT+TGG 0.419020 2_3:-63039953 Msa0305390:three_prime_UTR
CTCAGAATAATCTTAATAGA+AGG 0.420876 2_3:-63039831 Msa0305390:three_prime_UTR
AGGAAATTGAATTAGGGTTA+GGG 0.422089 2_3:+63044785 None:intergenic
CCACGAAGGAAATTGAATTA+GGG 0.423046 2_3:+63044779 None:intergenic
TGCTTTGATTGATGCTCTTG+TGG 0.430396 2_3:-63043660 Msa0305390:CDS
TGGAACGTTGATGGGGTTGA+TGG 0.438978 2_3:-63044340 Msa0305390:CDS
CGCATCAATGAGATTTGAAA+AGG 0.439093 2_3:+63044435 None:intergenic
GGGTTTGGAAAGGGAGAAAA+CGG 0.445927 2_3:+63044842 None:intergenic
TGGGATGAAATGGATAGAAA+AGG 0.448452 2_3:-63044226 Msa0305390:CDS
GATTGATGCTCTTGTGGAGA+AGG 0.449206 2_3:-63043654 Msa0305390:CDS
GAATCAAGTTCCAACATTGT+TGG 0.449479 2_3:+63044602 None:intergenic
GGATAGAAAAGGGGTTGAAA+AGG 0.456377 2_3:-63044215 Msa0305390:CDS
TTTAAGGAGATGAAGAGAAA+AGG 0.459913 2_3:-63044121 Msa0305390:intron
ATCGTTGTTGAAGGAGGTTA+GGG 0.462194 2_3:+63044735 None:intergenic
TGGAATAGAATGGAAGAACT+TGG 0.465600 2_3:-63043710 Msa0305390:CDS
AAAAGATTCAAACTTTAACT+TGG 0.465772 2_3:-63044360 Msa0305390:CDS
TTTGTCCCCAACTCTTTCCT+CGG 0.476927 2_3:+63043569 None:intergenic
CCTAAGCCGAGGAAAGAGTT+GGG 0.478100 2_3:-63043575 Msa0305390:CDS
ATGAGGAAAGGGTTTGGAAA+GGG 0.478719 2_3:+63044833 None:intergenic
TGTGATATGAGGAAAGGGTT+TGG 0.479525 2_3:+63044827 None:intergenic
GAAGTATGATGAAGAGATGT+TGG 0.481068 2_3:-63043612 Msa0305390:CDS
TACCAAGAATGTCGAGTACA+AGG 0.483008 2_3:+63044638 None:intergenic
AACAATTTCACAGCTTTCCA+TGG 0.487320 2_3:+63044142 None:intergenic
GCGTTTGTAATCGTTGTTGA+AGG 0.491407 2_3:+63044726 None:intergenic
TCTTGCCAATCACCCTCACT+TGG 0.498777 2_3:+63039948 None:intergenic
CATCAGCAATTCAGCATACA+AGG 0.499879 2_3:+63040028 None:intergenic
ATTGATGCTCTTGTGGAGAA+GGG 0.503547 2_3:-63043653 Msa0305390:CDS
AGGGGTTGATAGATATGGCT+AGG 0.509627 2_3:-63043634 Msa0305390:CDS
GCATTGTAAGCAGACGCATC+AGG 0.511446 2_3:+63043680 None:intergenic
GGAACGTTGATGGGGTTGAT+GGG 0.517245 2_3:-63044339 Msa0305390:CDS
TGTCGAAAGGTGGGAAGCCA+TGG 0.520310 2_3:-63044159 Msa0305390:CDS
TGGGGTGGTGGAGTAAATGT+TGG 0.520442 2_3:-63044255 Msa0305390:CDS
GGAGGTTAGGGTTGCACGAA+CGG 0.521029 2_3:+63044747 None:intergenic
GTGTGATTGGGCAAAGAATG+AGG 0.525687 2_3:+63044562 None:intergenic
GGTGGTATAAATTGGGGTGG+TGG 0.528405 2_3:-63044267 Msa0305390:CDS
GCCTAAGCCGAGGAAAGAGT+TGG 0.531132 2_3:-63043576 Msa0305390:CDS
GGAGAAAACGGAATCGGAGA+TGG 0.533090 2_3:+63044854 None:intergenic
ACTCTGAAGGTGGTGTGATT+GGG 0.534848 2_3:+63044550 None:intergenic
TTTGTAATCGTTGTTGAAGG+AGG 0.544827 2_3:+63044729 None:intergenic
TGTATGTTTCAGTGGAGTGT+TGG 0.547132 2_3:+63044662 None:intergenic
GGAAAGGGAGAAAACGGAAT+CGG 0.551828 2_3:+63044848 None:intergenic
GGGGTGGTGGAGTAAATGTT+GGG 0.561091 2_3:-63044254 Msa0305390:CDS
TGTGGTGAAGGTGTGATATG+AGG 0.561253 2_3:+63044816 None:intergenic
GATGAAGAGATGTTGGCTAA+AGG 0.566201 2_3:-63043605 Msa0305390:CDS
CCCAACTCTTTCCTCGGCTT+AGG 0.568658 2_3:+63043575 None:intergenic
TACAAGGTTGTATGTTTCAG+TGG 0.570952 2_3:+63044654 None:intergenic
TGGCAGAATAAAGTCAACAT+TGG 0.572716 2_3:-63040173 Msa0305390:intron
ATCGGAGATGGCGAGCTGAA+AGG 0.577764 2_3:+63044866 None:intergenic
GAAGGTGTGATATGAGGAAA+GGG 0.582886 2_3:+63044822 None:intergenic
TTAACATTGTGCTTCGTGGG+TGG 0.583064 2_3:-63044285 Msa0305390:CDS
TGTGATTGGGCAAAGAATGA+GGG 0.584620 2_3:+63044563 None:intergenic
GGATGAAATGGATAGAAAAG+GGG 0.592048 2_3:-63044224 Msa0305390:CDS
TCAGTCAGTCAGTCTGAGGA+AGG 0.602455 2_3:+63044928 None:intergenic
TTTAACTTGGAACGTTGATG+GGG 0.604968 2_3:-63044347 Msa0305390:CDS
TCAGTCAGTCAGTCAGTCTG+AGG 0.608218 2_3:+63044924 None:intergenic
TTGATGCTCTTGTGGAGAAG+GGG 0.608572 2_3:-63043652 Msa0305390:CDS
TAATCTTAATAGAAGGAACA+TGG 0.610325 2_3:-63039824 Msa0305390:three_prime_UTR
TATGAGGAAAGGGTTTGGAA+AGG 0.619065 2_3:+63044832 None:intergenic
AAAGACCTAACAGCCAAGTG+AGG 0.624525 2_3:-63039961 Msa0305390:three_prime_UTR
GAGGAAAGAGTTGGGGACAA+AGG 0.626798 2_3:-63043567 Msa0305390:intron
ACGTTTGAACATAACTCTGA+AGG 0.630901 2_3:+63044537 None:intergenic
AAGGACTTTCGCCTAAGCCG+AGG 0.631425 2_3:-63043586 Msa0305390:CDS
TGAAGGTGTGATATGAGGAA+AGG 0.636127 2_3:+63044821 None:intergenic
AAGACCTAACAGCCAAGTGA+GGG 0.638524 2_3:-63039960 Msa0305390:three_prime_UTR
GGGTTGCACGAACGGTTGTG+GGG 0.645695 2_3:+63044755 None:intergenic
AGCGTCGTCGACACAATGAG+CGG 0.651441 2_3:+63044507 None:intergenic
CTAAGCCGAGGAAAGAGTTG+GGG 0.660047 2_3:-63043574 Msa0305390:CDS
AACGGTTGTGGGGTCCACGA+AGG 0.660250 2_3:+63044765 None:intergenic
GTGGGTGGTATAAATTGGGG+TGG 0.673179 2_3:-63044270 Msa0305390:CDS
TTTGAACATAACTCTGAAGG+TGG 0.682861 2_3:+63044540 None:intergenic
TTCGTGGGTGGTATAAATTG+GGG 0.738741 2_3:-63044273 Msa0305390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACTTATAATACAATTATA+AGG - chr2_3:63040743-63040762 Msa0305390:intron 10.0%
!! TATAAAAAAAGTTAAACAAG+TGG + chr2_3:63042306-63042325 None:intergenic 15.0%
!! ATCAAACAAATAATATGTTT+GGG + chr2_3:63042637-63042656 None:intergenic 15.0%
!! AATCAAACAAATAATATGTT+TGG + chr2_3:63042638-63042657 None:intergenic 15.0%
!! CATCATAATATAATAATAAC+TGG + chr2_3:63042830-63042849 None:intergenic 15.0%
!!! AATAATATTTTCACATGTTT+TGG - chr2_3:63042853-63042872 Msa0305390:intron 15.0%
!! AAGTATCTTTAATAAAACAT+TGG - chr2_3:63044481-63044500 Msa0305390:CDS 15.0%
!!! ATTTTTTTTTCCTTTCTAAT+TGG - chr2_3:63044526-63044545 Msa0305390:CDS 15.0%
!! AAAAGATTCAAACTTTAACT+TGG - chr2_3:63040359-63040378 Msa0305390:intron 20.0%
!! GTGTGATAATTATAGATATA+AGG - chr2_3:63040771-63040790 Msa0305390:intron 20.0%
!! AACAACTCAATAATAAACTT+GGG + chr2_3:63040886-63040905 None:intergenic 20.0%
!! AAACAACTCAATAATAAACT+TGG + chr2_3:63040887-63040906 None:intergenic 20.0%
!!! TTTATTATTGAGTTGTTTGA+TGG - chr2_3:63040889-63040908 Msa0305390:intron 20.0%
!!! TTTTTTAGTTTGGAATAGAA+TGG - chr2_3:63040999-63041018 Msa0305390:intron 20.0%
!! AAATGAGAAGAAAATTTGTA+AGG + chr2_3:63041525-63041544 None:intergenic 20.0%
!!! CAAAGTTAGGTTTTATTAAT+TGG - chr2_3:63041706-63041725 Msa0305390:intron 20.0%
!!! TTTTCAATAAGAATTGCTTT+TGG - chr2_3:63042196-63042215 Msa0305390:intron 20.0%
!! AGTTCTATTTATTCTATTCA+TGG - chr2_3:63042325-63042344 Msa0305390:intron 20.0%
!! AATTGGAACTACAAAATTTA+TGG - chr2_3:63043261-63043280 Msa0305390:intron 20.0%
!!! CAGATGTAGTAAAATTTTTA+GGG - chr2_3:63043311-63043330 Msa0305390:intron 20.0%
!! TCTACATATTAGAATTAGAA+AGG + chr2_3:63044029-63044048 None:intergenic 20.0%
!! ATTCTAATATGTAGAATCAT+AGG - chr2_3:63044034-63044053 Msa0305390:intron 20.0%
!!! GATTTTGATTTTGATAGTAT+TGG - chr2_3:63044070-63044089 Msa0305390:intron 20.0%
!! TCTATAAATCAATTGTTTGT+AGG - chr2_3:63044439-63044458 Msa0305390:CDS 20.0%
!!! GTTTTATTAAAGATACTTTC+AGG + chr2_3:63044479-63044498 None:intergenic 20.0%
!! ATCTATTAAAAAAGCAAAGT+GGG - chr2_3:63044626-63044645 Msa0305390:CDS 20.0%
!! ACTGAAAATTGTCAAATAAA+TGG - chr2_3:63044857-63044876 Msa0305390:CDS 20.0%
!! TTTTTGAATTCCAACAATGT+TGG - chr2_3:63040107-63040126 Msa0305390:three_prime_UTR 25.0%
! GCATTCGTATTCAATTTATA+TGG - chr2_3:63040531-63040550 Msa0305390:intron 25.0%
!! TATATGGATATTTTGTCGAA+AGG - chr2_3:63040547-63040566 Msa0305390:intron 25.0%
! GTATTATAAGTAACAACAGT+AGG + chr2_3:63040736-63040755 None:intergenic 25.0%
! ATAACATATGTATCCATAGT+AGG + chr2_3:63040937-63040956 None:intergenic 25.0%
!!! TTCGATTGGTTTTTTTAGTT+TGG - chr2_3:63040989-63041008 Msa0305390:intron 25.0%
!!! GAAAAGATATTCAAGTTTTG+TGG - chr2_3:63041244-63041263 Msa0305390:intron 25.0%
! AAAAACTGGCATTTCAAAAA+TGG + chr2_3:63041348-63041367 None:intergenic 25.0%
!!! ATTTTTGAAATGCCAGTTTT+TGG - chr2_3:63041347-63041366 Msa0305390:intron 25.0%
! TCATATAATAGTTGTTTGTG+TGG + chr2_3:63041401-63041420 None:intergenic 25.0%
! TAAAAGAAACAGATGAAGAA+GGG + chr2_3:63041683-63041702 None:intergenic 25.0%
!! GTTTCTTTTACTACAAAGTT+AGG - chr2_3:63041693-63041712 Msa0305390:intron 25.0%
! TGAAATACCAAGAAAATAAG+TGG + chr2_3:63041831-63041850 None:intergenic 25.0%
!!! AGTATTTGGTGATTTTCAAT+TGG - chr2_3:63042248-63042267 Msa0305390:intron 25.0%
! CTATAGATTATCAGAAAACA+TGG + chr2_3:63042366-63042385 None:intergenic 25.0%
!! CATGTTTTCTGATAATCTAT+AGG - chr2_3:63042364-63042383 Msa0305390:intron 25.0%
! AGAAAATGTTCAATCTCAAA+TGG + chr2_3:63042471-63042490 None:intergenic 25.0%
! AAACAAATAATATGTTTGGG+AGG + chr2_3:63042634-63042653 None:intergenic 25.0%
! GCTTTGATTGAATTCAAATT+TGG - chr2_3:63042659-63042678 Msa0305390:intron 25.0%
!! CCTAAAAATTTTACTACATC+TGG + chr2_3:63043313-63043332 None:intergenic 25.0%
!! CCAGATGTAGTAAAATTTTT+AGG - chr2_3:63043310-63043329 Msa0305390:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - chr2_3:63043587-63043606 Msa0305390:CDS 25.0%
! AACCATTAGAAAAGATTTAG+AGG + chr2_3:63043627-63043646 None:intergenic 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG - chr2_3:63043634-63043653 Msa0305390:CDS 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + chr2_3:63043769-63043788 None:intergenic 25.0%
!! AATCATAGGATTTTATATGC+AGG - chr2_3:63044048-63044067 Msa0305390:intron 25.0%
! AATGAAATAAGATGAATAGC+AGG + chr2_3:63044264-63044283 None:intergenic 25.0%
! TATCCATGTTATACTGTTTA+TGG - chr2_3:63044388-63044407 Msa0305390:CDS 25.0%
! AAATCATTCAAGCAATATTG+CGG + chr2_3:63044510-63044529 None:intergenic 25.0%
!! TGTTTTCATACATTAGATGA+AGG - chr2_3:63044594-63044613 Msa0305390:CDS 25.0%
! CATCTATTAAAAAAGCAAAG+TGG - chr2_3:63044625-63044644 Msa0305390:CDS 25.0%
! TCTATTAAAAAAGCAAAGTG+GGG - chr2_3:63044627-63044646 Msa0305390:CDS 25.0%
!! ACTTTCTCATCTTTATTTCT+TGG - chr2_3:63044817-63044836 Msa0305390:CDS 25.0%
!! CTTTCTCATCTTTATTTCTT+GGG - chr2_3:63044818-63044837 Msa0305390:CDS 25.0%
! CTCAGAATAATCTTAATAGA+AGG - chr2_3:63044888-63044907 Msa0305390:exon 25.0%
! TAATCTTAATAGAAGGAACA+TGG - chr2_3:63044895-63044914 Msa0305390:exon 25.0%
! TCACTAGTTAATGGAAAAAA+TGG - chr2_3:63044923-63044942 Msa0305390:five_prime_UTR 25.0%
AGGAAATTGAATTAGGGTTA+GGG + chr2_3:63039937-63039956 None:intergenic 30.0%
AAGGAAATTGAATTAGGGTT+AGG + chr2_3:63039938-63039957 None:intergenic 30.0%
!! CGCTTTAGAATTCTTCAATT+GGG - chr2_3:63040015-63040034 Msa0305390:three_prime_UTR 30.0%
!! GGAGTGTTGGAATTTATATT+CGG + chr2_3:63040047-63040066 None:intergenic 30.0%
!!! AAGCTCAAGATTTGGTTTTT+GGG - chr2_3:63040332-63040351 Msa0305390:intron 30.0%
! ATTTTTAACATTGTGCTTCG+TGG - chr2_3:63040430-63040449 Msa0305390:intron 30.0%
! TTTTTAACATTGTGCTTCGT+GGG - chr2_3:63040431-63040450 Msa0305390:intron 30.0%
GAAAGCTGTGAAATTGTTTA+AGG - chr2_3:63040582-63040601 Msa0305390:intron 30.0%
TTTAAGGAGATGAAGAGAAA+AGG - chr2_3:63040598-63040617 Msa0305390:intron 30.0%
!!! AAGGTGTTGATTTTTCGATT+AGG - chr2_3:63040677-63040696 Msa0305390:intron 30.0%
TTTCGTGAAATGAAGGATTT+AGG - chr2_3:63040703-63040722 Msa0305390:intron 30.0%
CATTGATATGAAACAGCATT+AGG + chr2_3:63040841-63040860 None:intergenic 30.0%
TAGATGTAAACATTTCTGAC+AGG + chr2_3:63041301-63041320 None:intergenic 30.0%
! AATAGTTGTTTGTGTGGTTT+TGG + chr2_3:63041395-63041414 None:intergenic 30.0%
GTCATTGTCTCAAAATGTAA+AGG + chr2_3:63041469-63041488 None:intergenic 30.0%
CTCAACAATTGCATTAAGAT+GGG + chr2_3:63041608-63041627 None:intergenic 30.0%
TCTCAACAATTGCATTAAGA+TGG + chr2_3:63041609-63041628 None:intergenic 30.0%
GTAAAAGAAACAGATGAAGA+AGG + chr2_3:63041684-63041703 None:intergenic 30.0%
AATATCTGTGGCTTAAGTTT+GGG + chr2_3:63041798-63041817 None:intergenic 30.0%
TAATATCTGTGGCTTAAGTT+TGG + chr2_3:63041799-63041818 None:intergenic 30.0%
AAACTTAAGCCACAGATATT+AGG - chr2_3:63041798-63041817 Msa0305390:intron 30.0%
AACTTAAGCCACAGATATTA+GGG - chr2_3:63041799-63041818 Msa0305390:intron 30.0%
CATTGCAAGTTATAGACATA+GGG + chr2_3:63041863-63041882 None:intergenic 30.0%
! CTATGTCTATAACTTGCAAT+GGG - chr2_3:63041862-63041881 Msa0305390:intron 30.0%
TATCTGCACATCAATAATTC+TGG + chr2_3:63041939-63041958 None:intergenic 30.0%
AGAATTATTGATGTGCAGAT+AGG - chr2_3:63041938-63041957 Msa0305390:intron 30.0%
AAAGAAATTATCAACTACCC+AGG + chr2_3:63042179-63042198 None:intergenic 30.0%
AAAATCACCAAATACTTCGA+TGG + chr2_3:63042244-63042263 None:intergenic 30.0%
! TGGTGATTTTCAATTGGTAA+TGG - chr2_3:63042254-63042273 Msa0305390:intron 30.0%
!! GGTGATTTTCAATTGGTAAT+GGG - chr2_3:63042255-63042274 Msa0305390:intron 30.0%
AGATTATCAGAAAACATGGT+TGG + chr2_3:63042362-63042381 None:intergenic 30.0%
TTGCTCAAATTCTTCTTCTT+TGG + chr2_3:63042504-63042523 None:intergenic 30.0%
AAATGACATCATGCAATGTA+TGG + chr2_3:63042570-63042589 None:intergenic 30.0%
CGTAGTCAAGTAAGTAAAAT+TGG - chr2_3:63043244-63043263 Msa0305390:intron 30.0%
CAACTACATTGGATCATTTA+GGG - chr2_3:63043340-63043359 Msa0305390:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + chr2_3:63043583-63043602 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - chr2_3:63043622-63043641 Msa0305390:CDS 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - chr2_3:63043644-63043663 Msa0305390:CDS 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + chr2_3:63043702-63043721 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG - chr2_3:63043703-63043722 Msa0305390:CDS 30.0%
! TCTACCAACTTTTCTACTAT+AGG - chr2_3:63043773-63043792 Msa0305390:intron 30.0%
AATGAATTTCCTTCTGGTAT+CGG - chr2_3:63043992-63044011 Msa0305390:intron 30.0%
CATATTAGAATTAGAAAGGC+AGG + chr2_3:63044025-63044044 None:intergenic 30.0%
!!! TGTGCTTTTTTAGTTGTATC+TGG - chr2_3:63044189-63044208 Msa0305390:CDS 30.0%
ATAGCAGGATTTAAAGAAAC+AGG + chr2_3:63044249-63044268 None:intergenic 30.0%
AAGGATAAACATTCGAGAAA+TGG + chr2_3:63044318-63044337 None:intergenic 30.0%
ATGCCATAAACAGTATAACA+TGG + chr2_3:63044394-63044413 None:intergenic 30.0%
ATGTTATACTGTTTATGGCA+TGG - chr2_3:63044393-63044412 Msa0305390:CDS 30.0%
! ATTGATTTATAGACTGAGAG+AGG + chr2_3:63044432-63044451 None:intergenic 30.0%
AAAGATACTTTCAGGAAGTT+GGG + chr2_3:63044471-63044490 None:intergenic 30.0%
TAAAGATACTTTCAGGAAGT+TGG + chr2_3:63044472-63044491 None:intergenic 30.0%
CTTTATTCTGCCAATTAGAA+AGG + chr2_3:63044539-63044558 None:intergenic 30.0%
CTATTAAAAAAGCAAAGTGG+GGG - chr2_3:63044628-63044647 Msa0305390:CDS 30.0%
ATATATCGTTGTAGATTCTC+TGG - chr2_3:63044725-63044744 Msa0305390:CDS 30.0%
! TCTTTATTTCTTGGGCAAAT+TGG - chr2_3:63044826-63044845 Msa0305390:CDS 30.0%
! CTTTATTTCTTGGGCAAATT+GGG - chr2_3:63044827-63044846 Msa0305390:CDS 30.0%
CCACGAAGGAAATTGAATTA+GGG + chr2_3:63039943-63039962 None:intergenic 35.0%
TCCACGAAGGAAATTGAATT+AGG + chr2_3:63039944-63039963 None:intergenic 35.0%
TTTGTAATCGTTGTTGAAGG+AGG + chr2_3:63039993-63040012 None:intergenic 35.0%
!! GCGCTTTAGAATTCTTCAAT+TGG - chr2_3:63040014-63040033 Msa0305390:three_prime_UTR 35.0%
TACAAGGTTGTATGTTTCAG+TGG + chr2_3:63040068-63040087 None:intergenic 35.0%
GAATCAAGTTCCAACATTGT+TGG + chr2_3:63040120-63040139 None:intergenic 35.0%
! TTTGAACATAACTCTGAAGG+TGG + chr2_3:63040182-63040201 None:intergenic 35.0%
ACGTTTGAACATAACTCTGA+AGG + chr2_3:63040185-63040204 None:intergenic 35.0%
CGCATCAATGAGATTTGAAA+AGG + chr2_3:63040287-63040306 None:intergenic 35.0%
TGTTCTTGAAGCTCAAGATT+TGG - chr2_3:63040324-63040343 Msa0305390:intron 35.0%
!!! GAAGCTCAAGATTTGGTTTT+TGG - chr2_3:63040331-63040350 Msa0305390:intron 35.0%
!!! AGCTCAAGATTTGGTTTTTG+GGG - chr2_3:63040333-63040352 Msa0305390:intron 35.0%
!! ACTTTAACTTGGAACGTTGA+TGG - chr2_3:63040370-63040389 Msa0305390:intron 35.0%
!! CTTTAACTTGGAACGTTGAT+GGG - chr2_3:63040371-63040390 Msa0305390:intron 35.0%
!! TTTAACTTGGAACGTTGATG+GGG - chr2_3:63040372-63040391 Msa0305390:intron 35.0%
! GAGTAAATGTTGGGAGTTTT+GGG - chr2_3:63040474-63040493 Msa0305390:intron 35.0%
TGGGATGAAATGGATAGAAA+AGG - chr2_3:63040493-63040512 Msa0305390:intron 35.0%
GGGATGAAATGGATAGAAAA+GGG - chr2_3:63040494-63040513 Msa0305390:intron 35.0%
GGATGAAATGGATAGAAAAG+GGG - chr2_3:63040495-63040514 Msa0305390:intron 35.0%
! ATGGATATTTTGTCGAAAGG+TGG - chr2_3:63040550-63040569 Msa0305390:intron 35.0%
! TGGATATTTTGTCGAAAGGT+GGG - chr2_3:63040551-63040570 Msa0305390:intron 35.0%
AACAATTTCACAGCTTTCCA+TGG + chr2_3:63040580-63040599 None:intergenic 35.0%
AACATTGTGATTAGAGCCAT+TGG - chr2_3:63040646-63040665 Msa0305390:intron 35.0%
! TAGGTTGTTTCGTGAAATGA+AGG - chr2_3:63040696-63040715 Msa0305390:intron 35.0%
! TTTGATGGTATGATTGAGAG+TGG - chr2_3:63040904-63040923 Msa0305390:intron 35.0%
! TTGATGGTATGATTGAGAGT+GGG - chr2_3:63040905-63040924 Msa0305390:intron 35.0%
TGGAATAGAATGGAAGAACT+TGG - chr2_3:63041009-63041028 Msa0305390:intron 35.0%
GAAGTATGATGAAGAGATGT+TGG - chr2_3:63041107-63041126 Msa0305390:intron 35.0%
TGAAACCACACAAGAGATTT+CGG - chr2_3:63041210-63041229 Msa0305390:intron 35.0%
TGGAAGAAATCAATGGTGTT+AGG + chr2_3:63041375-63041394 None:intergenic 35.0%
!!! GTGGTTTTGGAAGAAATCAA+TGG + chr2_3:63041382-63041401 None:intergenic 35.0%
TGACAAAAATTGCATCAGGA+TGG + chr2_3:63041424-63041443 None:intergenic 35.0%
! TTTGTCACTGCATTGCTATT+AGG - chr2_3:63041437-63041456 Msa0305390:intron 35.0%
TATTGTGGAAACTGGAAACA+GGG + chr2_3:63041554-63041573 None:intergenic 35.0%
TTCAAATCTGCACAGTATTG+TGG + chr2_3:63041569-63041588 None:intergenic 35.0%
AATACTGTGCAGATTTGAAC+TGG - chr2_3:63041570-63041589 Msa0305390:intron 35.0%
CAAGTTTGAACAGTAATCAC+TGG + chr2_3:63041746-63041765 None:intergenic 35.0%
CAGTGATTACTGTTCAAACT+TGG - chr2_3:63041744-63041763 Msa0305390:intron 35.0%
! TGGATTGATAACTTAGACAC+AGG - chr2_3:63041764-63041783 Msa0305390:intron 35.0%
!! GAGGATTCCACTTATTTTCT+TGG - chr2_3:63041821-63041840 Msa0305390:intron 35.0%
CCATTGCAAGTTATAGACAT+AGG + chr2_3:63041864-63041883 None:intergenic 35.0%
! CCTATGTCTATAACTTGCAA+TGG - chr2_3:63041861-63041880 Msa0305390:intron 35.0%
ACTGTTGCCTTTGGATATAT+CGG + chr2_3:63042077-63042096 None:intergenic 35.0%
TATCCAAAGGCAACAGTTAT+CGG - chr2_3:63042080-63042099 Msa0305390:intron 35.0%
!! GCTAGTTTCCTAATGCTTTT+TGG - chr2_3:63042128-63042147 Msa0305390:intron 35.0%
!! ATCAACTGCCAAAAAGCATT+AGG + chr2_3:63042139-63042158 None:intergenic 35.0%
AATACTTCGATGGCTAAGTA+AGG + chr2_3:63042234-63042253 None:intergenic 35.0%
! TACTTAGCCATCGAAGTATT+TGG - chr2_3:63042234-63042253 Msa0305390:intron 35.0%
CTCTGCACACACAAATATAA+TGG - chr2_3:63042411-63042430 Msa0305390:intron 35.0%
TCAAATGGACAAACATGCAT+TGG + chr2_3:63042456-63042475 None:intergenic 35.0%
CAGAATCAAAGGCAAAAGTA+AGG + chr2_3:63042755-63042774 None:intergenic 35.0%
GAGGAGAATAACAGAATCAA+AGG + chr2_3:63042766-63042785 None:intergenic 35.0%
! TATAGTGTCATTAGCAATCC+AGG - chr2_3:63042942-63042961 Msa0305390:intron 35.0%
TGTTGTGATTGTTGCTGAAT+TGG + chr2_3:63042993-63043012 None:intergenic 35.0%
ATTCAGCAACAATCACAACA+AGG - chr2_3:63042993-63043012 Msa0305390:intron 35.0%
ACCAACTATATTAAGCACAG+TGG - chr2_3:63043031-63043050 Msa0305390:intron 35.0%
ACCACTGTGCTTAATATAGT+TGG + chr2_3:63043035-63043054 None:intergenic 35.0%
TATATTAAGCACAGTGGTCA+GGG - chr2_3:63043037-63043056 Msa0305390:intron 35.0%
! TGGGTTTTCAATGAGATATG+TGG - chr2_3:63043127-63043146 Msa0305390:intron 35.0%
TACTTACTTGACTACGTTTC+TGG + chr2_3:63043240-63043259 None:intergenic 35.0%
AATGATCCAATGTAGTTGGT+AGG + chr2_3:63043338-63043357 None:intergenic 35.0%
CCTAAATGATCCAATGTAGT+TGG + chr2_3:63043342-63043361 None:intergenic 35.0%
CCAACTACATTGGATCATTT+AGG - chr2_3:63043339-63043358 Msa0305390:intron 35.0%
ATTTGTGCCCTAATTAAGCT+TGG - chr2_3:63043427-63043446 Msa0305390:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + chr2_3:63043603-63043622 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + chr2_3:63043615-63043634 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG + chr2_3:63043699-63043718 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG + chr2_3:63043755-63043774 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + chr2_3:63043760-63043779 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr2_3:63043780-63043799 None:intergenic 35.0%
! ACAATTTTCCCTTCAAGAGT+GGG + chr2_3:63043806-63043825 None:intergenic 35.0%
! AACAATTTTCCCTTCAAGAG+TGG + chr2_3:63043807-63043826 None:intergenic 35.0%
ACTCTTGAAGGGAAAATTGT+TGG - chr2_3:63043806-63043825 Msa0305390:intron 35.0%
TGTTGGAATTCAAGTGTTAG+TGG - chr2_3:63043823-63043842 Msa0305390:intron 35.0%
!!! TAGGAATGGAGGTTTTGAAA+AGG - chr2_3:63043862-63043881 Msa0305390:intron 35.0%
! GATGCCAATTCCAAGATTTT+CGG - chr2_3:63043901-63043920 Msa0305390:intron 35.0%
! ATGCCAATTCCAAGATTTTC+GGG - chr2_3:63043902-63043921 Msa0305390:intron 35.0%
AATCCCGAAAATCTTGGAAT+TGG + chr2_3:63043908-63043927 None:intergenic 35.0%
!! AATTCCAAGATTTTCGGGAT+TGG - chr2_3:63043907-63043926 Msa0305390:intron 35.0%
CAGAAGAATGAATTTCCTTC+TGG - chr2_3:63043986-63044005 Msa0305390:intron 35.0%
ATGAATTTCCTTCTGGTATC+GGG - chr2_3:63043993-63044012 Msa0305390:intron 35.0%
ATTAGAATTAGAAAGGCAGG+AGG + chr2_3:63044022-63044041 None:intergenic 35.0%
TTTCTTTGCAAGTGTTTGTC+AGG + chr2_3:63044122-63044141 None:intergenic 35.0%
GACAAACACTTGCAAAGAAA+AGG - chr2_3:63044122-63044141 Msa0305390:CDS 35.0%
!! ACTTCCAAAAGCATTAAGAC+GGG + chr2_3:63044351-63044370 None:intergenic 35.0%
!! GACTTCCAAAAGCATTAAGA+CGG + chr2_3:63044352-63044371 None:intergenic 35.0%
!! TAATGCTTTTGGAAGTCATC+TGG - chr2_3:63044355-63044374 Msa0305390:CDS 35.0%
TGGCAGAATAAAGTCAACAT+TGG - chr2_3:63044546-63044565 Msa0305390:CDS 35.0%
GCATACAAGGCTAAAAAATG+TGG + chr2_3:63044681-63044700 None:intergenic 35.0%
ATGGAATGCTCACTAGTTAA+TGG - chr2_3:63044914-63044933 Msa0305390:five_prime_UTR 35.0%
ATGAGGAAAGGGTTTGGAAA+GGG + chr2_3:63039889-63039908 None:intergenic 40.0%
TATGAGGAAAGGGTTTGGAA+AGG + chr2_3:63039890-63039909 None:intergenic 40.0%
TGTGATATGAGGAAAGGGTT+TGG + chr2_3:63039895-63039914 None:intergenic 40.0%
! GAAGGTGTGATATGAGGAAA+GGG + chr2_3:63039900-63039919 None:intergenic 40.0%
! TGAAGGTGTGATATGAGGAA+AGG + chr2_3:63039901-63039920 None:intergenic 40.0%
CCCTAATTCAATTTCCTTCG+TGG - chr2_3:63039940-63039959 Msa0305390:three_prime_UTR 40.0%
ATCGTTGTTGAAGGAGGTTA+GGG + chr2_3:63039987-63040006 None:intergenic 40.0%
AATCGTTGTTGAAGGAGGTT+AGG + chr2_3:63039988-63040007 None:intergenic 40.0%
GCGTTTGTAATCGTTGTTGA+AGG + chr2_3:63039996-63040015 None:intergenic 40.0%
TGTATGTTTCAGTGGAGTGT+TGG + chr2_3:63040060-63040079 None:intergenic 40.0%
AACCTTGTACTCGACATTCT+TGG - chr2_3:63040079-63040098 Msa0305390:three_prime_UTR 40.0%
TACCAAGAATGTCGAGTACA+AGG + chr2_3:63040084-63040103 None:intergenic 40.0%
TGTGATTGGGCAAAGAATGA+GGG + chr2_3:63040159-63040178 None:intergenic 40.0%
CTTCGTGGGTGGTATAAATT+GGG - chr2_3:63040445-63040464 Msa0305390:intron 40.0%
TTCGTGGGTGGTATAAATTG+GGG - chr2_3:63040446-63040465 Msa0305390:intron 40.0%
! GGAGTAAATGTTGGGAGTTT+TGG - chr2_3:63040473-63040492 Msa0305390:intron 40.0%
!!! TTGGGAGTTTTGGGATGAAA+TGG - chr2_3:63040483-63040502 Msa0305390:intron 40.0%
GGATAGAAAAGGGGTTGAAA+AGG - chr2_3:63040504-63040523 Msa0305390:intron 40.0%
AACACCTTGAGAAACACCAA+TGG + chr2_3:63040665-63040684 None:intergenic 40.0%
TGATGGTATGATTGAGAGTG+GGG - chr2_3:63040906-63040925 Msa0305390:intron 40.0%
TGCTTTGATTGATGCTCTTG+TGG - chr2_3:63041059-63041078 Msa0305390:intron 40.0%
ATTGATGCTCTTGTGGAGAA+GGG - chr2_3:63041066-63041085 Msa0305390:intron 40.0%
! GATGAAGAGATGTTGGCTAA+AGG - chr2_3:63041114-63041133 Msa0305390:intron 40.0%
TAAGACCGAAATCTCTTGTG+TGG + chr2_3:63041218-63041237 None:intergenic 40.0%
! TGGTGTTAGGATCCAAAAAC+TGG + chr2_3:63041362-63041381 None:intergenic 40.0%
GCAGTGACAAAAATTGCATC+AGG + chr2_3:63041428-63041447 None:intergenic 40.0%
GTATTGTGGAAACTGGAAAC+AGG + chr2_3:63041555-63041574 None:intergenic 40.0%
! ATCAGTTTTGCAGTTCACTC+TGG + chr2_3:63041637-63041656 None:intergenic 40.0%
ATCTCACACATGCTGTGTAA+TGG - chr2_3:63041655-63041674 Msa0305390:intron 40.0%
TAACTTAGACACAGGCCAAT+TGG - chr2_3:63041772-63041791 Msa0305390:intron 40.0%
TTAAGCCACAGATATTAGGG+AGG - chr2_3:63041802-63041821 Msa0305390:intron 40.0%
! TGTCTATAACTTGCAATGGG+AGG - chr2_3:63041865-63041884 Msa0305390:intron 40.0%
! GTCTATAACTTGCAATGGGA+GGG - chr2_3:63041866-63041885 Msa0305390:intron 40.0%
GATAGGAGTTCAACATCCAA+AGG - chr2_3:63041955-63041974 Msa0305390:intron 40.0%
AGTTCAACATCCAAAGGCAA+CGG - chr2_3:63041961-63041980 Msa0305390:intron 40.0%
! GCTAGTTTCCTGATTCTTCT+TGG - chr2_3:63042016-63042035 Msa0305390:intron 40.0%
ATCAACTGCCAAGAAGAATC+AGG + chr2_3:63042027-63042046 None:intergenic 40.0%
TGATTCTTCTTGGCAGTTGA+TGG - chr2_3:63042026-63042045 Msa0305390:intron 40.0%
GATTCTTCTTGGCAGTTGAT+GGG - chr2_3:63042027-63042046 Msa0305390:intron 40.0%
TTGGCATCCGATATATCCAA+AGG - chr2_3:63042067-63042086 Msa0305390:intron 40.0%
CAAAAGCAACAGAATCAACG+AGG + chr2_3:63042785-63042804 None:intergenic 40.0%
!!! CTCGTTGATTCTGTTGCTTT+TGG - chr2_3:63042783-63042802 Msa0305390:intron 40.0%
GCTGAATTGGATTCTTCGAT+TGG + chr2_3:63042980-63042999 None:intergenic 40.0%
CTATATTAAGCACAGTGGTC+AGG - chr2_3:63043036-63043055 Msa0305390:intron 40.0%
TTCAATCTCATCCTGCACAA+TGG - chr2_3:63043094-63043113 Msa0305390:intron 40.0%
TCAATCTCATCCTGCACAAT+GGG - chr2_3:63043095-63043114 Msa0305390:intron 40.0%
AGATATGTGGCAAATGCTTC+AGG - chr2_3:63043140-63043159 Msa0305390:intron 40.0%
GATTGTTGAAGTAAGGAACC+CGG + chr2_3:63043168-63043187 None:intergenic 40.0%
GGGTTCCTTACTTCAACAAT+CGG - chr2_3:63043167-63043186 Msa0305390:intron 40.0%
GGTTCCTTACTTCAACAATC+GGG - chr2_3:63043168-63043187 Msa0305390:intron 40.0%
AACACCCGATTGTTGAAGTA+AGG + chr2_3:63043175-63043194 None:intergenic 40.0%
! ACTTGACTACGTTTCTGGAA+GGG + chr2_3:63043235-63043254 None:intergenic 40.0%
! TACTTGACTACGTTTCTGGA+AGG + chr2_3:63043236-63043255 None:intergenic 40.0%
! ATTGTGAGAGCGTACAGTTA+AGG - chr2_3:63043374-63043393 Msa0305390:intron 40.0%
TTCTGTTTGTCTCCAACAAG+AGG - chr2_3:63043403-63043422 Msa0305390:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + chr2_3:63043674-63043693 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG - chr2_3:63043712-63043731 Msa0305390:CDS 40.0%
! AATTTTCCCTTCAAGAGTGG+GGG + chr2_3:63043804-63043823 None:intergenic 40.0%
! CAATTTTCCCTTCAAGAGTG+GGG + chr2_3:63043805-63043824 None:intergenic 40.0%
TCCCAATGATTCTATGTGCT+CGG - chr2_3:63043943-63043962 Msa0305390:intron 40.0%
TCCGAGCACATAGAATCATT+GGG + chr2_3:63043947-63043966 None:intergenic 40.0%
ATCCGAGCACATAGAATCAT+TGG + chr2_3:63043948-63043967 None:intergenic 40.0%
!! CATTCTTCTGAGATTGTGCA+TGG + chr2_3:63043976-63043995 None:intergenic 40.0%
TAAGACGGGGAAAAACTTGA+AGG + chr2_3:63044337-63044356 None:intergenic 40.0%
! TTTCCCCGTCTTAATGCTTT+TGG - chr2_3:63044344-63044363 Msa0305390:CDS 40.0%
!! CTTCCAAAAGCATTAAGACG+GGG + chr2_3:63044350-63044369 None:intergenic 40.0%
ACTGTTTATGGCATGGCATA+AGG - chr2_3:63044400-63044419 Msa0305390:CDS 40.0%
CATCAGCAATTCAGCATACA+AGG + chr2_3:63044694-63044713 None:intergenic 40.0%
GGAAAGGGAGAAAACGGAAT+CGG + chr2_3:63039874-63039893 None:intergenic 45.0%
GGGTTTGGAAAGGGAGAAAA+CGG + chr2_3:63039880-63039899 None:intergenic 45.0%
! TGTGGTGAAGGTGTGATATG+AGG + chr2_3:63039906-63039925 None:intergenic 45.0%
!!! AGGGTTTTGTTGTGTGGTGA+AGG + chr2_3:63039918-63039937 None:intergenic 45.0%
!!! AGGGTTAGGGTTTTGTTGTG+TGG + chr2_3:63039924-63039943 None:intergenic 45.0%
GTGTGATTGGGCAAAGAATG+AGG + chr2_3:63040160-63040179 None:intergenic 45.0%
! ACTCTGAAGGTGGTGTGATT+GGG + chr2_3:63040172-63040191 None:intergenic 45.0%
! AACTCTGAAGGTGGTGTGAT+TGG + chr2_3:63040173-63040192 None:intergenic 45.0%
TTAACATTGTGCTTCGTGGG+TGG - chr2_3:63040434-63040453 Msa0305390:intron 45.0%
GCTTCGTGGGTGGTATAAAT+TGG - chr2_3:63040444-63040463 Msa0305390:intron 45.0%
! AGAGCCATTGGTGTTTCTCA+AGG - chr2_3:63040658-63040677 Msa0305390:intron 45.0%
TGCTTCTCAAGAAGTTTGCG+AGG - chr2_3:63040956-63040975 Msa0305390:intron 45.0%
TTCTCAAGAAGTTTGCGAGG+TGG - chr2_3:63040959-63040978 Msa0305390:intron 45.0%
TCTCAAGAAGTTTGCGAGGT+GGG - chr2_3:63040960-63040979 Msa0305390:intron 45.0%
GATTGATGCTCTTGTGGAGA+AGG - chr2_3:63041065-63041084 Msa0305390:intron 45.0%
TTGATGCTCTTGTGGAGAAG+GGG - chr2_3:63041067-63041086 Msa0305390:intron 45.0%
!! GGAGAAGGGGTTGATAGATA+TGG - chr2_3:63041080-63041099 Msa0305390:intron 45.0%
!! AGGGGTTGATAGATATGGCT+AGG - chr2_3:63041085-63041104 Msa0305390:intron 45.0%
TTTGTCCCCAACTCTTTCCT+CGG + chr2_3:63041153-63041172 None:intergenic 45.0%
TACGAACACGACTGAATGTG+AGG + chr2_3:63041501-63041520 None:intergenic 45.0%
CTGCACAGTATTGTGGAAAC+TGG + chr2_3:63041562-63041581 None:intergenic 45.0%
CTGTGCAGATTTGAACTGGT+TGG - chr2_3:63041574-63041593 Msa0305390:intron 45.0%
TGGCTTAAGTTTGGGCCAAT+TGG + chr2_3:63041790-63041809 None:intergenic 45.0%
GGAATCCTCCCTAATATCTG+TGG + chr2_3:63041810-63041829 None:intergenic 45.0%
! TCACTGTGCATTTTGTGCAC+TGG - chr2_3:63041900-63041919 Msa0305390:intron 45.0%
CATCCAAAGGCAACGGTTAT+CGG - chr2_3:63041968-63041987 Msa0305390:intron 45.0%
!! GCAGTTGATGGGAGTTTAAC+TGG - chr2_3:63042038-63042057 Msa0305390:intron 45.0%
! GTTGATGGGAGTTTAACTGG+TGG - chr2_3:63042041-63042060 Msa0305390:intron 45.0%
! GGAGTTTAACTGGTGGATGT+TGG - chr2_3:63042048-63042067 Msa0305390:intron 45.0%
TAGCTTCAGTAAGTGCTACC+TGG - chr2_3:63042158-63042177 Msa0305390:intron 45.0%
AGCTTCAGTAAGTGCTACCT+GGG - chr2_3:63042159-63042178 Msa0305390:intron 45.0%
! CAGAAAACATGGTTGGTGCA+TGG + chr2_3:63042355-63042374 None:intergenic 45.0%
TGTGGCATTAATTGCTGCTG+TGG + chr2_3:63043072-63043091 None:intergenic 45.0%
GCAGGATGAGATTGAATCTG+TGG + chr2_3:63043090-63043109 None:intergenic 45.0%
!! ATTTGCTGTTCCCATTGTGC+AGG + chr2_3:63043108-63043127 None:intergenic 45.0%
TGCACAATGGGAACAGCAAA+TGG - chr2_3:63043107-63043126 Msa0305390:intron 45.0%
GCACAATGGGAACAGCAAAT+GGG - chr2_3:63043108-63043127 Msa0305390:intron 45.0%
! CTTGACTACGTTTCTGGAAG+GGG + chr2_3:63043234-63043253 None:intergenic 45.0%
TAGGGTCCTACCAACTACAT+TGG - chr2_3:63043329-63043348 Msa0305390:intron 45.0%
TGTGCCCTAATTAAGCTTGG+TGG - chr2_3:63043430-63043449 Msa0305390:intron 45.0%
GTGCCCTAATTAAGCTTGGT+GGG - chr2_3:63043431-63043450 Msa0305390:intron 45.0%
! TGCCCTAATTAAGCTTGGTG+GGG - chr2_3:63043432-63043451 Msa0305390:intron 45.0%
TCCCCCACCAAGCTTAATTA+GGG + chr2_3:63043437-63043456 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr2_3:63043533-63043552 Msa0305390:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr2_3:63043534-63043553 Msa0305390:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + chr2_3:63043680-63043699 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + chr2_3:63043690-63043709 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG - chr2_3:63043713-63043732 Msa0305390:CDS 45.0%
! TGGTTAGTCCCACATTGACT+AGG - chr2_3:63043843-63043862 Msa0305390:intron 45.0%
! AGTCCCACATTGACTAGGAA+TGG - chr2_3:63043848-63043867 Msa0305390:intron 45.0%
CCTCCATTCCTAGTCAATGT+GGG + chr2_3:63043854-63043873 None:intergenic 45.0%
ACCTCCATTCCTAGTCAATG+TGG + chr2_3:63043855-63043874 None:intergenic 45.0%
CCAACCAATCCCGAAAATCT+TGG + chr2_3:63043914-63043933 None:intergenic 45.0%
!! CCAAGATTTTCGGGATTGGT+TGG - chr2_3:63043911-63043930 Msa0305390:intron 45.0%
! CAGGAGAAGCGCATAAATCA+AGG + chr2_3:63044230-63044249 None:intergenic 45.0%
GGAAGTCATCTGGATGTATG+TGG - chr2_3:63044365-63044384 Msa0305390:CDS 45.0%
! TTATAGACTGAGAGAGGCAC+AGG + chr2_3:63044426-63044445 None:intergenic 45.0%
AAAGACCTAACAGCCAAGTG+AGG - chr2_3:63044758-63044777 Msa0305390:CDS 45.0%
AAGACCTAACAGCCAAGTGA+GGG - chr2_3:63044759-63044778 Msa0305390:CDS 45.0%
TCAGTCAGTCAGTCTGAGGA+AGG + chr2_3:63039794-63039813 None:intergenic 50.0%
TCAGTCAGTCAGTCAGTCTG+AGG + chr2_3:63039798-63039817 None:intergenic 50.0%
TGGCGAGCTGAAAGGAGAAT+TGG + chr2_3:63039848-63039867 None:intergenic 50.0%
GGAGAAAACGGAATCGGAGA+TGG + chr2_3:63039868-63039887 None:intergenic 50.0%
! TGGAACGTTGATGGGGTTGA+TGG - chr2_3:63040379-63040398 Msa0305390:intron 50.0%
! GGAACGTTGATGGGGTTGAT+GGG - chr2_3:63040380-63040399 Msa0305390:intron 50.0%
GTGGGTGGTATAAATTGGGG+TGG - chr2_3:63040449-63040468 Msa0305390:intron 50.0%
GGTGGTATAAATTGGGGTGG+TGG - chr2_3:63040452-63040471 Msa0305390:intron 50.0%
!! TGGGGTGGTGGAGTAAATGT+TGG - chr2_3:63040464-63040483 Msa0305390:intron 50.0%
!! GGGGTGGTGGAGTAAATGTT+GGG - chr2_3:63040465-63040484 Msa0305390:intron 50.0%
CTAAGAACCATGCGTCGTGA+TGG - chr2_3:63040808-63040827 Msa0305390:intron 50.0%
AGAACAACCATCACGACGCA+TGG + chr2_3:63040818-63040837 None:intergenic 50.0%
CTCAAGAAGTTTGCGAGGTG+GGG - chr2_3:63040961-63040980 Msa0305390:intron 50.0%
TCAAGAAGTTTGCGAGGTGG+GGG - chr2_3:63040962-63040981 Msa0305390:intron 50.0%
GCATTGTAAGCAGACGCATC+AGG + chr2_3:63041042-63041061 None:intergenic 50.0%
CCTAAGCCGAGGAAAGAGTT+GGG - chr2_3:63041144-63041163 Msa0305390:intron 50.0%
CTAAGCCGAGGAAAGAGTTG+GGG - chr2_3:63041145-63041164 Msa0305390:intron 50.0%
GAGGAAAGAGTTGGGGACAA+AGG - chr2_3:63041152-63041171 Msa0305390:intron 50.0%
AGAGTTGGGGACAAAGGTTC+TGG - chr2_3:63041158-63041177 Msa0305390:intron 50.0%
GAGTTGGGGACAAAGGTTCT+GGG - chr2_3:63041159-63041178 Msa0305390:intron 50.0%
AATGCACAGTGAAGCCCTTC+AGG + chr2_3:63041892-63041911 None:intergenic 50.0%
!! TGTGCATTTTGTGCACTGGC+AGG - chr2_3:63041904-63041923 Msa0305390:intron 50.0%
!! ATTTTGTGCACTGGCAGGCA+GGG - chr2_3:63041909-63041928 Msa0305390:intron 50.0%
! GTTATCGGCTGCAGAAGACA+AGG - chr2_3:63041983-63042002 Msa0305390:intron 50.0%
CAGCCGATAACTGTTGCCTT+TGG + chr2_3:63042086-63042105 None:intergenic 50.0%
! GTTATCGGCTGCAGAAGACA+AGG - chr2_3:63041983-63042002 Msa0305390:intron 50.0%
TTTGGGAGGTTCTGCTGAGT+TGG + chr2_3:63042620-63042639 None:intergenic 50.0%
!! GGATTCTTCGATTGGCTCGT+CGG + chr2_3:63042972-63042991 None:intergenic 50.0%
AATTGCTGCTGTGGAGCTTG+TGG + chr2_3:63043063-63043082 None:intergenic 50.0%
AGGGCACAAATGCCTCTTGT+TGG + chr2_3:63043418-63043437 None:intergenic 50.0%
! GCCCTAATTAAGCTTGGTGG+GGG - chr2_3:63043433-63043452 Msa0305390:intron 50.0%
CTCCCCCACCAAGCTTAATT+AGG + chr2_3:63043438-63043457 None:intergenic 50.0%
! AATTAAGCTTGGTGGGGGAG+CGG - chr2_3:63043438-63043457 Msa0305390:intron 50.0%
GTGGATCCTAGTGTGGATCA+AGG - chr2_3:63043463-63043482 Msa0305390:intron 50.0%
!! CACTAGCCTTGATCCACACT+AGG + chr2_3:63043472-63043491 None:intergenic 50.0%
GTGGATCAAGGCTAGTGATG+TGG - chr2_3:63043475-63043494 Msa0305390:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr2_3:63043535-63043554 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr2_3:63043532-63043551 Msa0305390:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr2_3:63043538-63043557 Msa0305390:intron 50.0%
! CCCACATTGACTAGGAATGG+AGG - chr2_3:63043851-63043870 Msa0305390:intron 50.0%
ATCACCCTCACTTGGCTGTT+AGG + chr2_3:63044766-63044785 None:intergenic 50.0%
AACAGCCAAGTGAGGGTGAT+TGG - chr2_3:63044766-63044785 Msa0305390:CDS 50.0%
TCTTGCCAATCACCCTCACT+TGG + chr2_3:63044774-63044793 None:intergenic 50.0%
ATCGGAGATGGCGAGCTGAA+AGG + chr2_3:63039856-63039875 None:intergenic 55.0%
AGGGTTGCACGAACGGTTGT+GGG + chr2_3:63039968-63039987 None:intergenic 55.0%
TAGGGTTGCACGAACGGTTG+TGG + chr2_3:63039969-63039988 None:intergenic 55.0%
GGAGGTTAGGGTTGCACGAA+CGG + chr2_3:63039975-63039994 None:intergenic 55.0%
AGCGTCGTCGACACAATGAG+CGG + chr2_3:63040215-63040234 None:intergenic 55.0%
TGTCGAAAGGTGGGAAGCCA+TGG - chr2_3:63040560-63040579 Msa0305390:intron 55.0%
GAGTGGGGTTCGTCCTACTA+TGG - chr2_3:63040921-63040940 Msa0305390:intron 55.0%
GAGGTGGGGGTTTCTTCGAT+TGG - chr2_3:63040975-63040994 Msa0305390:intron 55.0%
AAGGACTTTCGCCTAAGCCG+AGG - chr2_3:63041133-63041152 Msa0305390:intron 55.0%
GCCTAAGCCGAGGAAAGAGT+TGG - chr2_3:63041143-63041162 Msa0305390:intron 55.0%
CCCAACTCTTTCCTCGGCTT+AGG + chr2_3:63041147-63041166 None:intergenic 55.0%
!! TTGGGGACAAAGGTTCTGGG+AGG - chr2_3:63041162-63041181 Msa0305390:intron 55.0%
TCTGGGAGGAGAATCTGTCG+AGG - chr2_3:63041176-63041195 Msa0305390:intron 55.0%
TTGCAATGGGAGGGCCTGAA+GGG - chr2_3:63041875-63041894 Msa0305390:intron 55.0%
!! CATTTTGTGCACTGGCAGGC+AGG - chr2_3:63041908-63041927 Msa0305390:intron 55.0%
CAGCCGATAACCGTTGCCTT+TGG + chr2_3:63041974-63041993 None:intergenic 55.0%
GTGGCAAATGCTTCAGGCAC+CGG - chr2_3:63043146-63043165 Msa0305390:intron 55.0%
TGGCAAATGCTTCAGGCACC+GGG - chr2_3:63043147-63043166 Msa0305390:intron 55.0%
! ATTAAGCTTGGTGGGGGAGC+GGG - chr2_3:63043439-63043458 Msa0305390:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr2_3:63043540-63043559 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr2_3:63043546-63043565 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr2_3:63043547-63043566 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr2_3:63043546-63043565 Msa0305390:intron 55.0%
GTGCTACCCCCACTCTTGAA+GGG - chr2_3:63043795-63043814 Msa0305390:intron 55.0%
AACGGTTGTGGGGTCCACGA+AGG + chr2_3:63039957-63039976 None:intergenic 60.0%
GGGTTGCACGAACGGTTGTG+GGG + chr2_3:63039967-63039986 None:intergenic 60.0%
CTTGCAATGGGAGGGCCTGA+AGG - chr2_3:63041874-63041893 Msa0305390:intron 60.0%
AGCGGGAGTGGATCCTAGTG+TGG - chr2_3:63043456-63043475 Msa0305390:intron 60.0%
! GGTGCTACCCCCACTCTTGA+AGG - chr2_3:63043794-63043813 Msa0305390:intron 60.0%
!! GGAGGCATCCCGATACCAGA+AGG + chr2_3:63044004-63044023 None:intergenic 60.0%
!! GATTGGCTCGTCGGCACGCC+TGG + chr2_3:63042963-63042982 None:intergenic 70.0%
! GCTTGGTGGGGGAGCGGGAG+TGG - chr2_3:63043444-63043463 Msa0305390:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 63039781 63044960 63039781 ID=Msa0305390;Name=Msa0305390
chr2_3 mRNA 63039781 63044960 63039781 ID=Msa0305390-mRNA-1;Parent=Msa0305390;Name=Msa0305390-mRNA-1;_AED=0.26;_eAED=0.26;_QI=55|0|0.66|1|1|1|3|373|328
chr2_3 exon 63039781 63040189 63039781 ID=Msa0305390-mRNA-1:exon:21084;Parent=Msa0305390-mRNA-1
chr2_3 exon 63043568 63043734 63043568 ID=Msa0305390-mRNA-1:exon:21083;Parent=Msa0305390-mRNA-1
chr2_3 exon 63044122 63044960 63044122 ID=Msa0305390-mRNA-1:exon:21082;Parent=Msa0305390-mRNA-1
chr2_3 five_prime_UTR 63044906 63044960 63044906 ID=Msa0305390-mRNA-1:five_prime_utr;Parent=Msa0305390-mRNA-1
chr2_3 CDS 63044122 63044905 63044122 ID=Msa0305390-mRNA-1:cds;Parent=Msa0305390-mRNA-1
chr2_3 CDS 63043568 63043734 63043568 ID=Msa0305390-mRNA-1:cds;Parent=Msa0305390-mRNA-1
chr2_3 CDS 63040154 63040189 63040154 ID=Msa0305390-mRNA-1:cds;Parent=Msa0305390-mRNA-1
chr2_3 three_prime_UTR 63039781 63040153 63039781 ID=Msa0305390-mRNA-1:three_prime_utr;Parent=Msa0305390-mRNA-1
Gene Sequence

>Msa0305390

ATGCGTTGTCCAATTCTCCTTTCAGCTCGCCATCTCCGATTCCGTTTTCTCCCTTTCCAAACCCTTTCCTCATATCACACCTTCACCACACAACAAAACCCTAACCCTAATTCAATTTCCTTCGTGGACCCCACAACCGTTCGTGCAACCCTAACCTCCTTCAACAACGATTACAAACGCGCTTTAGAATTCTTCAATTGGGTCGAAACCGAATATAAATTCCAACACTCCACTGAAACATACAACCTTGTACTCGACATTCTTGGTAAATTTTTTGAATTCCAACAATGTTGGAACTTGATTCATCGTATGCGTCAAAACCCTCATTCTTTGCCCAATCACACCACCTTCAGAGTTATGTTCAAACGTTACGTATCCGCTCATTGTGTCGACGACGCTGTTAGCACTTTTCAACGTCTCAATGAGTTCAATTTGAAAGATGAAACTTCCTTTTCAAATCTCATTGATGCGCTTTGTGAGTATAAACATGTTCTTGAAGCTCAAGATTTGGTTTTTGGGGACAAAAAGATTCAAACTTTAACTTGGAACGTTGATGGGGTTGATGGGTTTGTTGTGAGTTGTAAAAATACTAAAATTTTTAACATTGTGCTTCGTGGGTGGTATAAATTGGGGTGGTGGAGTAAATGTTGGGAGTTTTGGGATGAAATGGATAGAAAAGGGGTTGAAAAGGATTTGCATTCGTATTCAATTTATATGGATATTTTGTCGAAAGGTGGGAAGCCATGGAAAGCTGTGAAATTGTTTAAGGAGATGAAGAGAAAAGTTTGGAATAGAATGGAAGAACTTGGATGTAGTCCTGATGCGTCTGCTTACAATGCTTTGATTGATGCTCTTGTGGAGAAGGGGTTGATAGATATGGCTAGGAAGTATGATGAAGAGATGTTGGCTAAAGGACTTTCGCCTAAGCCGAGGAAAGAGTTGGGGACAAAGAATAAAGTCAACATTGGAAGCTGCAGTATTGCTTGA
Protein sequence

>Msa0305390

MRCPILLSARHLRFRFLPFQTLSSYHTFTTQQNPNPNSISFVDPTTVRATLTSFNNDYKRALEFFNWVETEYKFQHSTETYNLVLDILGKFFEFQQCWNLIHRMRQNPHSLPNHTTFRVMFKRYVSAHCVDDAVSTFQRLNEFNLKDETSFSNLIDALCEYKHVLEAQDLVFGDKKIQTLTWNVDGVDGFVVSCKNTKIFNIVLRGWYKLGWWSKCWEFWDEMDRKGVEKDLHSYSIYMDILSKGGKPWKAVKLFKEMKRKVWNRMEELGCSPDASAYNALIDALVEKGLIDMARKYDEEMLAKGLSPKPRKELGTKNKVNIGSCSIA*