Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262320 | GAU27116.1 | 48.744 | 876 | 245 | 20 | 1 | 749 | 1 | 799 | 0.0 | 661 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262320 | sp|O49453|Y4844_ARATH | 59.677 | 124 | 44 | 2 | 632 | 751 | 24 | 145 | 1.71e-36 | 137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262320 | A0A2Z6M561 | 48.744 | 876 | 245 | 20 | 1 | 749 | 1 | 799 | 0.0 | 661 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0225160 | Msa0262320 | 0.875425 | 3.113486e-68 | -8.615850e-47 |
Msa0262320 | Msa0300100 | 0.842884 | 1.968755e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262320 | MtrunA17_Chr2g0325231 | 45.714 | 490 | 189 | 9 | 214 | 630 | 164 | 649 | 7.32e-88 | 296 |
Msa0262320 | MtrunA17_Chr2g0325231 | 37.115 | 520 | 238 | 12 | 265 | 733 | 303 | 784 | 2.44e-60 | 219 |
Msa0262320 | MtrunA17_Chr2g0325231 | 43.350 | 406 | 159 | 8 | 300 | 636 | 153 | 556 | 7.34e-53 | 197 |
Msa0262320 | MtrunA17_Chr2g0325231 | 34.296 | 277 | 98 | 7 | 452 | 645 | 153 | 428 | 3.43e-17 | 86.3 |
Msa0262320 | MtrunA17_Chr2g0325691 | 43.797 | 532 | 207 | 8 | 200 | 648 | 151 | 673 | 2.15e-86 | 288 |
Msa0262320 | MtrunA17_Chr2g0325691 | 41.319 | 288 | 115 | 6 | 254 | 517 | 461 | 718 | 4.36e-31 | 130 |
Msa0262320 | MtrunA17_Chr2g0325861 | 43.886 | 458 | 210 | 5 | 209 | 633 | 154 | 597 | 1.91e-79 | 272 |
Msa0262320 | MtrunA17_Chr2g0325861 | 38.086 | 491 | 235 | 9 | 216 | 658 | 234 | 703 | 6.03e-58 | 212 |
Msa0262320 | MtrunA17_Chr2g0325281 | 41.901 | 463 | 219 | 7 | 203 | 629 | 118 | 566 | 2.02e-74 | 253 |
Msa0262320 | MtrunA17_Chr2g0325281 | 48.534 | 307 | 128 | 6 | 254 | 556 | 297 | 577 | 3.05e-52 | 192 |
Msa0262320 | MtrunA17_Chr2g0325281 | 39.316 | 234 | 130 | 3 | 411 | 632 | 210 | 443 | 3.23e-28 | 120 |
Msa0262320 | MtrunA17_Chr2g0325281 | 36.190 | 315 | 162 | 10 | 185 | 468 | 281 | 587 | 1.72e-24 | 108 |
Msa0262320 | MtrunA17_Chr2g0325361 | 37.688 | 597 | 275 | 12 | 215 | 728 | 318 | 900 | 9.02e-73 | 257 |
Msa0262320 | MtrunA17_Chr2g0325361 | 34.273 | 461 | 220 | 7 | 200 | 628 | 114 | 523 | 1.13e-42 | 167 |
Msa0262320 | MtrunA17_Chr2g0325321 | 40.605 | 463 | 225 | 6 | 203 | 629 | 118 | 566 | 1.98e-65 | 231 |
Msa0262320 | MtrunA17_Chr2g0325321 | 41.219 | 279 | 155 | 3 | 271 | 549 | 315 | 584 | 8.17e-34 | 139 |
Msa0262320 | MtrunA17_Chr2g0325321 | 32.722 | 327 | 146 | 6 | 388 | 648 | 189 | 507 | 4.87e-22 | 101 |
Msa0262320 | MtrunA17_Chr2g0325761 | 40.406 | 443 | 176 | 9 | 209 | 595 | 181 | 591 | 2.16e-59 | 213 |
Msa0262320 | MtrunA17_Chr2g0325661 | 35.702 | 577 | 247 | 15 | 213 | 730 | 190 | 701 | 6.36e-53 | 197 |
Msa0262320 | MtrunA17_Chr7g0235901 | 49.794 | 243 | 97 | 3 | 214 | 439 | 75 | 309 | 1.42e-50 | 179 |
Msa0262320 | MtrunA17_Chr7g0235901 | 47.791 | 249 | 111 | 6 | 389 | 621 | 64 | 309 | 3.24e-38 | 144 |
Msa0262320 | MtrunA17_Chr7g0235901 | 46.275 | 255 | 118 | 5 | 300 | 544 | 64 | 309 | 2.29e-37 | 142 |
Msa0262320 | MtrunA17_Chr7g0235901 | 35.246 | 244 | 102 | 8 | 448 | 643 | 18 | 253 | 1.05e-11 | 66.6 |
Msa0262320 | MtrunA17_Chr2g0325701 | 50.206 | 243 | 110 | 3 | 214 | 453 | 177 | 411 | 6.98e-49 | 182 |
Msa0262320 | MtrunA17_Chr2g0325701 | 38.491 | 265 | 151 | 4 | 284 | 537 | 148 | 411 | 1.00e-28 | 122 |
Msa0262320 | MtrunA17_Chr2g0325701 | 42.857 | 182 | 101 | 1 | 440 | 621 | 233 | 411 | 1.14e-23 | 106 |
Msa0262320 | MtrunA17_Chr2g0325701 | 34.058 | 276 | 150 | 8 | 342 | 604 | 165 | 421 | 6.01e-20 | 94.7 |
Msa0262320 | MtrunA17_Chr2g0325701 | 33.333 | 249 | 107 | 8 | 439 | 637 | 110 | 349 | 7.85e-14 | 75.1 |
Msa0262320 | MtrunA17_Chr2g0325721 | 41.555 | 373 | 167 | 4 | 200 | 530 | 137 | 500 | 4.66e-48 | 177 |
Msa0262320 | MtrunA17_Chr2g0325641 | 44.410 | 322 | 154 | 5 | 284 | 588 | 1 | 314 | 3.81e-47 | 170 |
Msa0262320 | MtrunA17_Chr2g0325641 | 46.290 | 283 | 132 | 3 | 373 | 635 | 1 | 283 | 4.10e-46 | 167 |
Msa0262320 | MtrunA17_Chr2g0325641 | 39.249 | 293 | 115 | 6 | 266 | 510 | 29 | 306 | 1.61e-30 | 123 |
Msa0262320 | MtrunA17_Chr2g0324821 | 68.333 | 120 | 38 | 0 | 632 | 751 | 14 | 133 | 9.54e-47 | 162 |
Msa0262320 | MtrunA17_Chr2g0325221 | 37.317 | 410 | 210 | 8 | 214 | 584 | 189 | 590 | 5.68e-46 | 175 |
Msa0262320 | MtrunA17_Chr2g0325221 | 37.456 | 283 | 132 | 5 | 271 | 516 | 318 | 592 | 2.57e-26 | 115 |
Msa0262320 | MtrunA17_Chr2g0325711 | 30.524 | 534 | 323 | 10 | 214 | 730 | 160 | 662 | 9.75e-44 | 169 |
Msa0262320 | MtrunA17_Chr2g0325711 | 31.852 | 405 | 194 | 12 | 283 | 628 | 114 | 495 | 3.90e-26 | 114 |
Msa0262320 | MtrunA17_Chr2g0280141 | 30.092 | 545 | 319 | 11 | 209 | 722 | 122 | 635 | 2.62e-40 | 159 |
Msa0262320 | MtrunA17_Chr2g0325351 | 38.182 | 330 | 145 | 5 | 203 | 527 | 160 | 435 | 3.22e-40 | 157 |
Msa0262320 | MtrunA17_Chr2g0325351 | 36.296 | 270 | 156 | 5 | 334 | 594 | 153 | 415 | 9.10e-24 | 107 |
Msa0262320 | MtrunA17_Chr2g0325351 | 28.132 | 423 | 232 | 13 | 370 | 730 | 101 | 513 | 3.74e-19 | 92.4 |
Msa0262320 | MtrunA17_Chr5g0416271 | 45.106 | 235 | 94 | 4 | 212 | 433 | 105 | 317 | 5.19e-39 | 151 |
Msa0262320 | MtrunA17_Chr5g0416271 | 33.791 | 364 | 165 | 11 | 369 | 730 | 121 | 410 | 1.31e-28 | 120 |
Msa0262320 | MtrunA17_Chr2g0325781 | 57.325 | 157 | 60 | 2 | 209 | 362 | 152 | 304 | 8.70e-37 | 140 |
Msa0262320 | MtrunA17_Chr2g0325781 | 44.595 | 148 | 74 | 2 | 308 | 448 | 156 | 302 | 6.69e-23 | 100 |
Msa0262320 | MtrunA17_Chr2g0325781 | 39.086 | 197 | 69 | 5 | 343 | 530 | 146 | 300 | 1.15e-19 | 90.5 |
Msa0262320 | MtrunA17_Chr2g0325781 | 55.682 | 88 | 35 | 1 | 533 | 616 | 215 | 302 | 2.69e-17 | 83.6 |
Msa0262320 | MtrunA17_Chr2g0325811 | 32.850 | 414 | 217 | 6 | 217 | 598 | 188 | 572 | 6.78e-36 | 145 |
Msa0262320 | MtrunA17_Chr2g0325811 | 38.783 | 263 | 137 | 2 | 385 | 623 | 307 | 569 | 3.37e-27 | 118 |
Msa0262320 | MtrunA17_Chr2g0325811 | 32.797 | 311 | 180 | 6 | 334 | 619 | 165 | 471 | 1.79e-19 | 93.6 |
Msa0262320 | MtrunA17_Chr5g0413571 | 55.970 | 134 | 55 | 2 | 618 | 751 | 1 | 130 | 1.78e-35 | 130 |
Msa0262320 | MtrunA17_Chr5g0434751 | 44.030 | 268 | 119 | 3 | 341 | 577 | 1 | 268 | 3.17e-35 | 135 |
Msa0262320 | MtrunA17_Chr5g0434751 | 43.600 | 250 | 120 | 2 | 387 | 629 | 1 | 236 | 2.09e-30 | 121 |
Msa0262320 | MtrunA17_Chr5g0434751 | 45.673 | 208 | 91 | 3 | 429 | 636 | 1 | 186 | 1.17e-25 | 107 |
Msa0262320 | MtrunA17_Chr5g0434751 | 38.148 | 270 | 135 | 5 | 284 | 529 | 1 | 262 | 1.23e-22 | 99.0 |
Msa0262320 | MtrunA17_Chr5g0434751 | 41.699 | 259 | 109 | 8 | 272 | 510 | 35 | 271 | 3.38e-20 | 92.0 |
Msa0262320 | MtrunA17_Chr5g0434751 | 34.562 | 217 | 86 | 5 | 265 | 433 | 56 | 264 | 4.82e-13 | 70.5 |
Msa0262320 | MtrunA17_Chr2g0282661 | 55.303 | 132 | 57 | 1 | 622 | 751 | 14 | 145 | 4.78e-35 | 130 |
Msa0262320 | MtrunA17_Chr2g0325621 | 35.294 | 289 | 159 | 6 | 203 | 471 | 123 | 403 | 1.56e-25 | 112 |
Msa0262320 | MtrunA17_Chr2g0325621 | 39.151 | 212 | 116 | 3 | 408 | 613 | 173 | 377 | 9.54e-18 | 87.8 |
Msa0262320 | MtrunA17_Chr2g0325621 | 31.169 | 308 | 163 | 9 | 235 | 497 | 84 | 387 | 6.44e-14 | 75.5 |
Msa0262320 | MtrunA17_Chr2g0325621 | 43.571 | 140 | 79 | 0 | 428 | 567 | 248 | 387 | 2.29e-13 | 73.9 |
Msa0262320 | MtrunA17_Chr2g0325791 | 50.000 | 142 | 60 | 3 | 253 | 391 | 23 | 156 | 2.00e-25 | 107 |
Msa0262320 | MtrunA17_Chr2g0325791 | 44.444 | 135 | 74 | 1 | 342 | 476 | 24 | 157 | 4.28e-19 | 89.4 |
Msa0262320 | MtrunA17_Chr2g0325791 | 44.203 | 138 | 72 | 2 | 427 | 560 | 21 | 157 | 1.64e-16 | 81.6 |
Msa0262320 | MtrunA17_Chr2g0325791 | 42.748 | 131 | 70 | 2 | 388 | 514 | 24 | 153 | 1.19e-15 | 79.0 |
Msa0262320 | MtrunA17_Chr2g0325791 | 40.458 | 131 | 68 | 2 | 414 | 544 | 35 | 155 | 4.70e-13 | 71.2 |
Msa0262320 | MtrunA17_Chr2g0325791 | 38.346 | 133 | 77 | 2 | 472 | 600 | 24 | 155 | 1.15e-11 | 67.0 |
Msa0262320 | MtrunA17_Chr2g0325791 | 28.977 | 176 | 108 | 5 | 511 | 673 | 41 | 212 | 3.15e-11 | 65.5 |
Msa0262320 | MtrunA17_Chr2g0325651 | 50.000 | 152 | 58 | 2 | 372 | 505 | 235 | 386 | 2.70e-25 | 108 |
Msa0262320 | MtrunA17_Chr2g0325651 | 42.012 | 169 | 74 | 2 | 387 | 555 | 236 | 380 | 2.54e-20 | 94.0 |
Msa0262320 | MtrunA17_Chr2g0325651 | 37.402 | 254 | 126 | 6 | 376 | 602 | 138 | 385 | 4.29e-20 | 93.2 |
Msa0262320 | MtrunA17_Chr2g0325651 | 49.624 | 133 | 42 | 5 | 271 | 393 | 269 | 386 | 2.16e-16 | 82.0 |
Msa0262320 | MtrunA17_Chr2g0325651 | 40.385 | 156 | 64 | 3 | 485 | 633 | 236 | 369 | 3.10e-16 | 81.6 |
Msa0262320 | MtrunA17_Chr2g0325241 | 33.667 | 300 | 150 | 7 | 422 | 687 | 120 | 404 | 3.55e-25 | 109 |
Msa0262320 | MtrunA17_Chr2g0325241 | 39.738 | 229 | 119 | 4 | 372 | 595 | 110 | 324 | 5.57e-23 | 102 |
Msa0262320 | MtrunA17_Chr2g0325241 | 36.715 | 207 | 111 | 4 | 291 | 481 | 120 | 322 | 7.70e-16 | 80.5 |
Msa0262320 | MtrunA17_Chr2g0325741 | 50.794 | 126 | 37 | 2 | 214 | 325 | 193 | 307 | 1.07e-24 | 105 |
Msa0262320 | MtrunA17_Chr2g0325611 | 37.652 | 247 | 119 | 4 | 216 | 455 | 92 | 310 | 1.14e-24 | 109 |
Msa0262320 | MtrunA17_Chr2g0325611 | 42.697 | 178 | 89 | 2 | 334 | 511 | 146 | 310 | 3.97e-20 | 95.1 |
Msa0262320 | MtrunA17_Chr2g0325611 | 31.023 | 303 | 173 | 8 | 449 | 730 | 128 | 415 | 1.63e-17 | 87.0 |
Msa0262320 | MtrunA17_Chr6g0471251 | 39.677 | 310 | 167 | 6 | 213 | 511 | 187 | 487 | 1.66e-24 | 109 |
Msa0262320 | MtrunA17_Chr6g0471251 | 31.452 | 372 | 210 | 6 | 235 | 581 | 136 | 487 | 6.01e-24 | 107 |
Msa0262320 | MtrunA17_Chr6g0471251 | 34.661 | 251 | 136 | 5 | 397 | 621 | 195 | 443 | 1.04e-18 | 91.3 |
Msa0262320 | MtrunA17_Chr6g0471251 | 30.075 | 399 | 241 | 11 | 345 | 722 | 203 | 584 | 6.15e-17 | 85.5 |
Msa0262320 | MtrunA17_Chr2g0333341 | 35.769 | 260 | 129 | 6 | 212 | 448 | 204 | 448 | 8.93e-23 | 103 |
Msa0262320 | MtrunA17_Chr2g0333341 | 33.466 | 251 | 142 | 8 | 371 | 618 | 222 | 450 | 1.95e-16 | 83.6 |
Msa0262320 | MtrunA17_Chr2g0333341 | 31.835 | 267 | 152 | 8 | 249 | 491 | 189 | 449 | 3.87e-11 | 66.6 |
Msa0262320 | MtrunA17_Chr2g0333341 | 32.984 | 191 | 101 | 4 | 224 | 407 | 279 | 449 | 8.55e-11 | 65.5 |
Msa0262320 | MtrunA17_Chr6g0476691 | 55.844 | 77 | 34 | 0 | 675 | 751 | 17 | 93 | 6.90e-21 | 88.2 |
Msa0262320 | MtrunA17_Chr2g0325201 | 37.778 | 225 | 97 | 8 | 214 | 399 | 8 | 228 | 8.87e-20 | 89.0 |
Msa0262320 | MtrunA17_Chr8g0365411 | 39.552 | 134 | 44 | 1 | 618 | 751 | 1 | 97 | 1.47e-18 | 81.6 |
Msa0262320 | MtrunA17_Chr2g0325731 | 67.241 | 58 | 19 | 0 | 555 | 612 | 1 | 58 | 2.38e-16 | 74.3 |
Msa0262320 | MtrunA17_Chr2g0325731 | 56.452 | 62 | 27 | 0 | 471 | 532 | 1 | 62 | 1.76e-12 | 63.2 |
Msa0262320 | MtrunA17_Chr2g0325261 | 50.000 | 100 | 36 | 1 | 372 | 471 | 221 | 306 | 2.78e-15 | 77.4 |
Msa0262320 | MtrunA17_Chr2g0325261 | 31.955 | 266 | 148 | 9 | 127 | 387 | 69 | 306 | 2.94e-13 | 71.2 |
Msa0262320 | MtrunA17_Chr2g0325261 | 48.235 | 85 | 44 | 0 | 429 | 513 | 222 | 306 | 1.82e-12 | 68.9 |
Msa0262320 | MtrunA17_Chr2g0325261 | 38.235 | 136 | 60 | 3 | 423 | 555 | 192 | 306 | 4.17e-11 | 65.1 |
Msa0262320 | MtrunA17_Chr2g0325341 | 50.000 | 100 | 36 | 1 | 372 | 471 | 221 | 306 | 2.78e-15 | 77.4 |
Msa0262320 | MtrunA17_Chr2g0325341 | 31.955 | 266 | 148 | 9 | 127 | 387 | 69 | 306 | 2.94e-13 | 71.2 |
Msa0262320 | MtrunA17_Chr2g0325341 | 48.235 | 85 | 44 | 0 | 429 | 513 | 222 | 306 | 1.82e-12 | 68.9 |
Msa0262320 | MtrunA17_Chr2g0325341 | 38.235 | 136 | 60 | 3 | 423 | 555 | 192 | 306 | 4.17e-11 | 65.1 |
Msa0262320 | MtrunA17_Chr2g0325751 | 39.695 | 131 | 72 | 1 | 387 | 517 | 7 | 130 | 4.09e-15 | 73.6 |
Msa0262320 | MtrunA17_Chr2g0325751 | 44.094 | 127 | 64 | 1 | 415 | 541 | 7 | 126 | 1.08e-14 | 72.4 |
Msa0262320 | MtrunA17_Chr2g0325751 | 41.667 | 120 | 63 | 1 | 395 | 514 | 1 | 113 | 5.90e-14 | 70.1 |
Msa0262320 | MtrunA17_Chr2g0325751 | 40.909 | 132 | 71 | 1 | 499 | 630 | 7 | 131 | 9.01e-14 | 69.7 |
Msa0262320 | MtrunA17_Chr2g0325751 | 40.800 | 125 | 67 | 1 | 457 | 581 | 7 | 124 | 6.31e-13 | 67.4 |
Msa0262320 | MtrunA17_Chr2g0325751 | 44.355 | 124 | 58 | 2 | 341 | 457 | 7 | 126 | 1.12e-12 | 66.6 |
Msa0262320 | MtrunA17_Chr2g0325751 | 39.200 | 125 | 69 | 1 | 471 | 595 | 7 | 124 | 3.15e-12 | 65.1 |
Msa0262320 | MtrunA17_Chr2g0325751 | 37.500 | 128 | 73 | 1 | 439 | 566 | 3 | 123 | 6.14e-11 | 61.6 |
Msa0262320 | MtrunA17_Chr5g0438061 | 43.529 | 85 | 45 | 3 | 675 | 757 | 138 | 221 | 2.09e-12 | 67.4 |
Msa0262320 | MtrunA17_Chr2g0325211 | 35.165 | 182 | 100 | 2 | 395 | 576 | 1 | 164 | 1.66e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0262320 | AT4G28440.1 | 59.677 | 124 | 44 | 2 | 632 | 751 | 24 | 145 | 1.74e-37 | 137 |
Msa0262320 | AT2G33845.1 | 62.500 | 120 | 42 | 1 | 632 | 751 | 59 | 175 | 5.13e-36 | 134 |
Msa0262320 | AT1G03810.1 | 59.167 | 120 | 48 | 1 | 632 | 751 | 21 | 139 | 4.75e-35 | 130 |
Msa0262320 | AT1G23750.1 | 53.333 | 120 | 52 | 2 | 632 | 751 | 16 | 131 | 4.03e-34 | 127 |
Msa0262320 | AT1G23750.2 | 65.854 | 82 | 28 | 0 | 670 | 751 | 13 | 94 | 3.73e-31 | 117 |
Msa0262320 | AT1G10590.3 | 49.286 | 140 | 66 | 3 | 617 | 754 | 14 | 150 | 6.82e-30 | 116 |
Msa0262320 | AT1G10590.2 | 49.640 | 139 | 65 | 3 | 618 | 754 | 1 | 136 | 2.18e-29 | 114 |
Msa0262320 | AT1G10590.1 | 49.640 | 139 | 65 | 3 | 618 | 754 | 1 | 136 | 2.18e-29 | 114 |
Msa0262320 | AT2G01050.1 | 31.000 | 200 | 96 | 5 | 52 | 213 | 61 | 256 | 8.66e-21 | 97.1 |
Find 176 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCATCCGGTCTTCATTT+TGG | 0.147230 | 2_2:-61141472 | None:intergenic |
ACAATAACAGATATGGAAAA+TGG | 0.193888 | 2_2:+61140149 | Msa0262320:CDS |
AACACAAACTTCACAATTCT+TGG | 0.196723 | 2_2:+61140105 | Msa0262320:CDS |
ATGCAAAGATTAACCTGTTC+TGG | 0.253388 | 2_2:+61142984 | Msa0262320:CDS |
TGGTGTCGAATATTATGATT+AGG | 0.284068 | 2_2:+61140568 | Msa0262320:CDS |
CGGCTCCGGCACGGTTGATT+TGG | 0.295732 | 2_2:-61139890 | None:intergenic |
TTGATTTAAACTCCTTCATT+TGG | 0.300483 | 2_2:-61141883 | None:intergenic |
CGCCGGCGCCGGCTCCGGCA+CGG | 0.310798 | 2_2:-61139899 | None:intergenic |
TGCTTTCGGTGTGGTCAATA+TGG | 0.314123 | 2_2:+61140633 | Msa0262320:CDS |
TCATCAGTCAGTGGAATATC+TGG | 0.327468 | 2_2:-61139996 | None:intergenic |
TCAATACCAGCTCCTTCATT+TGG | 0.329113 | 2_2:-61141400 | None:intergenic |
TCTCTAACTTCAAAACTTGC+AGG | 0.345507 | 2_2:-61143058 | None:intergenic |
CATTTCTAAACAAAAGCATT+TGG | 0.354274 | 2_2:+61140842 | Msa0262320:CDS |
GTAATTGTTTGCGCCGGCGC+CGG | 0.360383 | 2_2:-61139910 | None:intergenic |
GTTTGCGCCGGCGCCGGCTC+CGG | 0.360997 | 2_2:-61139904 | None:intergenic |
GATAGATTTGGATGGATGTT+TGG | 0.365545 | 2_2:+61140548 | Msa0262320:CDS |
TTCCATATCTGTTATTGTAA+TGG | 0.369838 | 2_2:-61140144 | None:intergenic |
ATGGAAGAATGTGACGTTGC+AGG | 0.369944 | 2_2:+61139972 | Msa0262320:CDS |
GGTGTCGAATATTATGATTA+GGG | 0.380228 | 2_2:+61140569 | Msa0262320:CDS |
GTTGCGAGCTGTGAAGATTA+TGG | 0.381200 | 2_2:-61142092 | None:intergenic |
TCCTTTCAATTGCATCTCTT+CGG | 0.386064 | 2_2:-61141840 | None:intergenic |
AACCGTGCCGGAGCCGGCGC+CGG | 0.389709 | 2_2:+61139897 | Msa0262320:CDS |
TCCCGTCAAGTCCTTCATAT+TGG | 0.391697 | 2_2:-61140608 | None:intergenic |
TGAAAGCAAAATGAAGAAAC+TGG | 0.395480 | 2_2:+61141646 | Msa0262320:CDS |
AACGGCCTAAAAGCTCTGTT+AGG | 0.397459 | 2_2:+61139849 | Msa0262320:CDS |
CTTCACAGCTCGCAACGAAC+AGG | 0.397474 | 2_2:+61142099 | Msa0262320:CDS |
TCGACTCAAGTTCCTTCATT+CGG | 0.398246 | 2_2:-61141052 | None:intergenic |
GATAGATTTGGTGACTGATT+TGG | 0.398420 | 2_2:+61141004 | Msa0262320:CDS |
TGAGGCTGGCAGTTGATTGC+CGG | 0.400616 | 2_2:+61143014 | Msa0262320:CDS |
CGGATTTGAGCTCCTCCACC+TGG | 0.402176 | 2_2:-61141820 | None:intergenic |
TGAAGGTCAAGTGATAGATT+TGG | 0.402956 | 2_2:+61140992 | Msa0262320:CDS |
TTGAGTCATGCTCCTTCATC+CGG | 0.403682 | 2_2:-61141484 | None:intergenic |
TCGACTCAAGGTCCTTCATT+CGG | 0.407601 | 2_2:-61141190 | None:intergenic |
TGCCTAGTTGGAGACGAAAC+TGG | 0.409862 | 2_2:+61142067 | Msa0262320:CDS |
AACCATTACAATAACAGATA+TGG | 0.411252 | 2_2:+61140142 | Msa0262320:CDS |
AGAGTGTGTCCATCAGTTCC+TGG | 0.411282 | 2_2:-61141947 | None:intergenic |
GACTTGACGGGATATGCTTT+CGG | 0.414906 | 2_2:+61140619 | Msa0262320:CDS |
GCCTCATATGTCCCCAGAAC+AGG | 0.421872 | 2_2:-61142997 | None:intergenic |
TAATGTTGAAGGTTGATGAT+AGG | 0.428079 | 2_2:+61140493 | Msa0262320:intron |
GGAAGTAGAGCTATGTTTGA+TGG | 0.432924 | 2_2:+61140749 | Msa0262320:CDS |
TCAACTCAAACATCTTCATC+TGG | 0.434798 | 2_2:-61141694 | None:intergenic |
GGCATTCAGCGATGCGGGAG+GGG | 0.443427 | 2_2:-61142048 | None:intergenic |
TGCAAAGATTAACCTGTTCT+GGG | 0.444397 | 2_2:+61142985 | Msa0262320:CDS |
CATTCACCAGCTCCTTCACT+TGG | 0.448226 | 2_2:-61140869 | None:intergenic |
ATGCCCTCTACGACGGTCCT+TGG | 0.450755 | 2_2:+61140213 | Msa0262320:CDS |
CAAAGACCATTCATCGCGGC+AGG | 0.453871 | 2_2:-61142011 | None:intergenic |
CAATAACAGATATGGAAAAT+GGG | 0.455701 | 2_2:+61140150 | Msa0262320:CDS |
CGCATCGCTGAATGCCTAGT+TGG | 0.457979 | 2_2:+61142055 | Msa0262320:CDS |
CTCCAATATGAAGGACTTGA+CGG | 0.458749 | 2_2:+61140606 | Msa0262320:CDS |
CCTTTGTTTGGCCTTTGAGT+TGG | 0.459817 | 2_2:-61141598 | None:intergenic |
ACCTGTTCTGGGGACATATG+AGG | 0.469408 | 2_2:+61142996 | Msa0262320:CDS |
CAAATCAACCGTGCCGGAGC+CGG | 0.469913 | 2_2:+61139891 | Msa0262320:CDS |
TCGATTCATGCTCCTCTACC+CGG | 0.471523 | 2_2:-61141094 | None:intergenic |
TGAAAGTAAAGTGGAGGAGC+TGG | 0.471794 | 2_2:+61141772 | Msa0262320:CDS |
TGAAAGGCAAGTTAAGGAGT+TGG | 0.472552 | 2_2:+61141310 | Msa0262320:CDS |
AATATGTGTGGAGATAGATT+TGG | 0.473353 | 2_2:+61140536 | Msa0262320:CDS |
ATTGCATTTCTTTCGACTCA+AGG | 0.473853 | 2_2:-61141202 | None:intergenic |
AACTAGGCATTCAGCGATGC+GGG | 0.477868 | 2_2:-61142053 | None:intergenic |
TGAAGTTTGCGAGAAAATGC+AGG | 0.484103 | 2_2:+61140689 | Msa0262320:CDS |
GGACAAATTAAAGAATTTGA+AGG | 0.485990 | 2_2:+61141860 | Msa0262320:CDS |
GAGGCTGGCAGTTGATTGCC+GGG | 0.487781 | 2_2:+61143015 | Msa0262320:CDS |
GCAACATGAAGGCCGGGTAG+AGG | 0.489755 | 2_2:+61141082 | Msa0262320:CDS |
AGAATTTGAAGGCCAAATGA+AGG | 0.491861 | 2_2:+61141871 | Msa0262320:CDS |
TTGATCTGTGCTCCTTCACC+CGG | 0.492422 | 2_2:-61141232 | None:intergenic |
CGCAGAATTACAGTAGCACC+AGG | 0.493091 | 2_2:-61142959 | None:intergenic |
CCACCTGAGGGTTGTGTCAA+CGG | 0.499119 | 2_2:+61139942 | Msa0262320:CDS |
GCAATTCGAGAGCGGAATGA+AGG | 0.499417 | 2_2:+61140911 | Msa0262320:CDS |
TAGAGAATTTGAAAGTAAAG+TGG | 0.505463 | 2_2:+61141763 | Msa0262320:CDS |
AAGAAATGCAATATGAAGGC+CGG | 0.508601 | 2_2:+61141213 | Msa0262320:CDS |
CACAAGAAAGGTAATTGTGT+TGG | 0.509056 | 2_2:+61140657 | Msa0262320:CDS |
CTGGTTTCAGATCTATCACT+CGG | 0.510842 | 2_2:-61141928 | None:intergenic |
TTCGCTAACTGCGAAACAAA+GGG | 0.512242 | 2_2:+61140283 | Msa0262320:CDS |
TGGAAGAATGTGACGTTGCA+GGG | 0.512738 | 2_2:+61139973 | Msa0262320:CDS |
GAAGGAGCTGGTGAATGAAT+TGG | 0.514445 | 2_2:+61140875 | Msa0262320:CDS |
AAGAGAAGCAACATGAAGGC+CGG | 0.515329 | 2_2:+61141075 | Msa0262320:CDS |
AGAGAAGCAACATGAAGGTC+GGG | 0.518749 | 2_2:+61141718 | Msa0262320:CDS |
TTGTGTCAACGGCGGCGAGA+TGG | 0.519174 | 2_2:+61139953 | Msa0262320:CDS |
CGAGTTAATCTCCAATATGA+AGG | 0.519768 | 2_2:+61140597 | Msa0262320:CDS |
AAGGTTGATGATAGGCTAAG+TGG | 0.520158 | 2_2:+61140501 | Msa0262320:intron |
TCAAAGAAGCGAGAATTTGA+AGG | 0.520665 | 2_2:+61141503 | Msa0262320:CDS |
TTCCAGTTTCGTCTCCAACT+AGG | 0.523242 | 2_2:-61142069 | None:intergenic |
TGTTTGATGGAGGACTTGAT+TGG | 0.525108 | 2_2:+61140762 | Msa0262320:CDS |
CCAACTTGTAAGTAAAATGA+AGG | 0.525826 | 2_2:+61141346 | Msa0262320:CDS |
AGAGAAGCAGCATGAAGGTC+GGG | 0.525926 | 2_2:+61140947 | Msa0262320:CDS |
GCTGTTTGAAAGGCAAGTTA+AGG | 0.528403 | 2_2:+61141304 | Msa0262320:CDS |
CTTATCTCTTGTTACAACGT+TGG | 0.532972 | 2_2:+61140249 | Msa0262320:CDS |
CCAAAATGAAGACCGGATGA+AGG | 0.534699 | 2_2:+61141472 | Msa0262320:CDS |
AGGCATTCAGCGATGCGGGA+GGG | 0.535234 | 2_2:-61142049 | None:intergenic |
TCTGTTAGGGTTTGTCACGC+CGG | 0.535311 | 2_2:+61139863 | Msa0262320:CDS |
TTGACTCAAACAGTTTGACT+TGG | 0.537417 | 2_2:-61141568 | None:intergenic |
GATCTGAAACCAGGAACTGA+TGG | 0.538419 | 2_2:+61141938 | Msa0262320:CDS |
GAAGGTTGGTTGCTGTTCAT+CGG | 0.538772 | 2_2:+61141976 | Msa0262320:CDS |
CTACGACGGTCCTTGGACGG+TGG | 0.538986 | 2_2:+61140220 | Msa0262320:CDS |
AGAAATGCAATATGAAGGCC+GGG | 0.540036 | 2_2:+61141214 | Msa0262320:CDS |
TTTCGCTAACTGCGAAACAA+AGG | 0.543685 | 2_2:+61140282 | Msa0262320:CDS |
AGAATTCGAAAGCCAAATGA+AGG | 0.543820 | 2_2:+61141388 | Msa0262320:CDS |
TCGAAAGAAATGCAATATGA+AGG | 0.546034 | 2_2:+61141209 | Msa0262320:CDS |
TAAGAATCACCCACCGTCCA+AGG | 0.546893 | 2_2:-61140230 | None:intergenic |
TACGACGGTCCTTGGACGGT+GGG | 0.548132 | 2_2:+61140221 | Msa0262320:CDS |
CTAAACAGAAGCTGTTTGAA+AGG | 0.550931 | 2_2:+61141294 | Msa0262320:CDS |
ACGGCCTAAAAGCTCTGTTA+GGG | 0.551361 | 2_2:+61139850 | Msa0262320:CDS |
TTTGTGTTGTAGTGTTTGAA+AGG | 0.551559 | 2_2:-61140090 | None:intergenic |
ACAATGAGAGTGTGTTTCCA+TGG | 0.554396 | 2_2:-61140041 | None:intergenic |
TCCAATATGAAGGACTTGAC+GGG | 0.554496 | 2_2:+61140607 | Msa0262320:CDS |
CCGCCGTTGACACAACCCTC+AGG | 0.554650 | 2_2:-61139945 | None:intergenic |
CGAAAGCCAAATGAAGGAGC+TGG | 0.557116 | 2_2:+61141394 | Msa0262320:CDS |
CTGATGAAGAAATGTCTCAC+TGG | 0.557162 | 2_2:+61140012 | Msa0262320:CDS |
AGAATTTGAATGTCAAGTGA+AGG | 0.557857 | 2_2:+61141262 | Msa0262320:CDS |
AAGACCATTCATCGCGGCAG+GGG | 0.558425 | 2_2:-61142009 | None:intergenic |
CTGTGAGCTGTATACATCCC+CGG | 0.558440 | 2_2:-61143033 | None:intergenic |
GCATTTCGAAAGTCGAATGA+AGG | 0.559949 | 2_2:+61141430 | Msa0262320:CDS |
TCAAATTATAACCAACTCAA+AGG | 0.560582 | 2_2:+61141587 | Msa0262320:CDS |
AGAGAAGCAACATGAAGGCC+GGG | 0.561927 | 2_2:+61141076 | Msa0262320:CDS |
AAGAGAACCAAAATGAAGAC+CGG | 0.565006 | 2_2:+61141465 | Msa0262320:CDS |
CAATGAGAGTGTGTTTCCAT+GGG | 0.565284 | 2_2:-61140040 | None:intergenic |
GCAATATGAAGGCCGGGTGA+AGG | 0.567231 | 2_2:+61141220 | Msa0262320:CDS |
AGGACTTGATTGGAGAGTGC+AGG | 0.568670 | 2_2:+61140772 | Msa0262320:CDS |
AGGTTGATGATAGGCTAAGT+GGG | 0.570548 | 2_2:+61140502 | Msa0262320:intron |
CGAGTGATAGATCTGAAACC+AGG | 0.572545 | 2_2:+61141929 | Msa0262320:CDS |
TCCGAAGAGATGCAATTGAA+AGG | 0.572726 | 2_2:+61141839 | Msa0262320:CDS |
CGTCCAAGGACCGTCGTAGA+GGG | 0.572976 | 2_2:-61140216 | None:intergenic |
CTTGATTGGAGAGTGCAGGC+AGG | 0.579042 | 2_2:+61140776 | Msa0262320:CDS |
GCAACATGAAGGTCGGGTGA+AGG | 0.579309 | 2_2:+61141724 | Msa0262320:CDS |
TAAGATTGAAGAGTTTGTCG+AGG | 0.580976 | 2_2:+61140713 | Msa0262320:CDS |
AAAGACCATTCATCGCGGCA+GGG | 0.582404 | 2_2:-61142010 | None:intergenic |
GGTCAATATGGACACAAGAA+AGG | 0.584743 | 2_2:+61140645 | Msa0262320:CDS |
CCGTCCAAGGACCGTCGTAG+AGG | 0.585215 | 2_2:-61140217 | None:intergenic |
TTGACACAACCCTCAGGTGG+TGG | 0.589533 | 2_2:-61139939 | None:intergenic |
TCGAAAGAGAAGCAACATGA+AGG | 0.592048 | 2_2:+61141071 | Msa0262320:CDS |
AAGAGAAGCAACATGAAGGT+CGG | 0.592279 | 2_2:+61141717 | Msa0262320:CDS |
GATGGAGCTTTATCAAGTCA+TGG | 0.592913 | 2_2:+61140815 | Msa0262320:CDS |
GTGTCGAATATTATGATTAG+GGG | 0.593607 | 2_2:+61140570 | Msa0262320:CDS |
TTGAAAGAGAAGCAACATGA+AGG | 0.594016 | 2_2:+61141713 | Msa0262320:CDS |
AGGTGAGATTTCGTTCAGCA+AGG | 0.594024 | 2_2:-61140070 | None:intergenic |
CCTCTACGACGGTCCTTGGA+CGG | 0.594478 | 2_2:+61140217 | Msa0262320:CDS |
GTTCTGGGGACATATGAGGC+TGG | 0.595747 | 2_2:+61143000 | Msa0262320:CDS |
GGAAAGCCAAGTGAAGGAGC+TGG | 0.596353 | 2_2:+61140863 | Msa0262320:CDS |
AGACCATTCATCGCGGCAGG+GGG | 0.596553 | 2_2:-61142008 | None:intergenic |
TATGCTGTAATTGTTTGCGC+CGG | 0.596627 | 2_2:-61139916 | None:intergenic |
AACTGATGGACACACTCTGA+CGG | 0.596699 | 2_2:+61141952 | Msa0262320:CDS |
AGAATTTGAAGGTCAAGTGA+AGG | 0.598860 | 2_2:+61141514 | Msa0262320:CDS |
AGAATTTGAAAGTAAAGTGG+AGG | 0.600864 | 2_2:+61141766 | Msa0262320:CDS |
TGTCTCACTGGTCAAACCCA+TGG | 0.603369 | 2_2:+61140024 | Msa0262320:CDS |
GAAAACCAAATCAACCGTGC+CGG | 0.605156 | 2_2:+61139885 | Msa0262320:CDS |
GAAGTTTGCGAGAAAATGCA+GGG | 0.605272 | 2_2:+61140690 | Msa0262320:CDS |
TAGGCATTCAGCGATGCGGG+AGG | 0.606084 | 2_2:-61142050 | None:intergenic |
AAATCACTCTTCAACGACAT+CGG | 0.606854 | 2_2:-61143123 | None:intergenic |
AAGAGAAGCAGCATGAAGGT+CGG | 0.608292 | 2_2:+61140946 | Msa0262320:CDS |
GCATTTGGAAAGCCAAGTGA+AGG | 0.609390 | 2_2:+61140857 | Msa0262320:CDS |
TTAAAAGAGAAGCAGCATGA+AGG | 0.610849 | 2_2:+61140942 | Msa0262320:CDS |
GACATTTCTTCATCAGTCAG+TGG | 0.612296 | 2_2:-61140005 | None:intergenic |
TTCACAGCTCGCAACGAACA+GGG | 0.612349 | 2_2:+61142100 | Msa0262320:CDS |
CACACTCTGACGGTGAAGGT+TGG | 0.613932 | 2_2:+61141962 | Msa0262320:CDS |
CAGTAGCACCAGGTTTCATG+AGG | 0.614066 | 2_2:-61142949 | None:intergenic |
TGAGAAAACAAAATGACTAA+CGG | 0.615023 | 2_2:+61139831 | None:intergenic |
AGAATTTAAAGATCATGTGA+CGG | 0.619537 | 2_2:+61141124 | Msa0262320:CDS |
TGAATGTCAAGTGAAGGAGC+AGG | 0.620944 | 2_2:+61141268 | Msa0262320:CDS |
TTACAGCATACCACCACCTG+AGG | 0.624168 | 2_2:+61139929 | Msa0262320:CDS |
TGGACACACTCTGACGGTGA+AGG | 0.634126 | 2_2:+61141958 | Msa0262320:CDS |
TACAATCATGCCCTCTACGA+CGG | 0.635617 | 2_2:+61140206 | Msa0262320:CDS |
GCAGTGGACCTCATGAAACC+TGG | 0.636118 | 2_2:+61142941 | Msa0262320:intron |
CAACTAGGCATTCAGCGATG+CGG | 0.638058 | 2_2:-61142054 | None:intergenic |
AACTGCGAAACAAAGGGTTG+CGG | 0.639446 | 2_2:+61140289 | Msa0262320:CDS |
AGTAGAGCTATGTTTGATGG+AGG | 0.642585 | 2_2:+61140752 | Msa0262320:CDS |
CCGTTGACACAACCCTCAGG+TGG | 0.651219 | 2_2:-61139942 | None:intergenic |
GACGGGATATGCTTTCGGTG+TGG | 0.660721 | 2_2:+61140624 | Msa0262320:CDS |
GCAAAGATTAACCTGTTCTG+GGG | 0.661250 | 2_2:+61142986 | Msa0262320:CDS |
TGTCGAATATTATGATTAGG+GGG | 0.661343 | 2_2:+61140571 | Msa0262320:CDS |
AGACAAAAGCAATTCGAGAG+CGG | 0.666493 | 2_2:+61140903 | Msa0262320:CDS |
GAAATACGCGAGAATATGTG+TGG | 0.672119 | 2_2:+61140524 | Msa0262320:CDS |
TGTGTGGAGATAGATTTGGA+TGG | 0.680421 | 2_2:+61140540 | Msa0262320:CDS |
TACAGCATACCACCACCTGA+GGG | 0.681679 | 2_2:+61139930 | Msa0262320:CDS |
CCAACTCAAAGGCCAAACAA+AGG | 0.684873 | 2_2:+61141598 | Msa0262320:CDS |
AGGCTGGCAGTTGATTGCCG+GGG | 0.718353 | 2_2:+61143016 | Msa0262320:CDS |
CCTGAGGGTTGTGTCAACGG+CGG | 0.743947 | 2_2:+61139945 | Msa0262320:CDS |
CTATCAAAGACCATTCATCG+CGG | 0.806711 | 2_2:-61142015 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAAAAATAGAGAATTTGA+AGG | + | chr2_2:61140975-61140994 | Msa0262320:CDS | 20.0% |
!!! | TAAAACTCGTTGATTTTATA+TGG | + | chr2_2:61142361-61142380 | Msa0262320:intron | 20.0% |
!!! | ACCTAATTTTATGCATATTA+TGG | + | chr2_2:61142418-61142437 | Msa0262320:intron | 20.0% |
!! | TCCATAATATGCATAAAATT+AGG | - | chr2_2:61142422-61142441 | None:intergenic | 20.0% |
!!! | AACATATGGGTTTAATTTAT+CGG | + | chr2_2:61142712-61142731 | Msa0262320:intron | 20.0% |
! | AACCATTACAATAACAGATA+TGG | + | chr2_2:61140142-61140161 | Msa0262320:CDS | 25.0% |
! | TTCCATATCTGTTATTGTAA+TGG | - | chr2_2:61140147-61140166 | None:intergenic | 25.0% |
! | ACAATAACAGATATGGAAAA+TGG | + | chr2_2:61140149-61140168 | Msa0262320:CDS | 25.0% |
! | CAATAACAGATATGGAAAAT+GGG | + | chr2_2:61140150-61140169 | Msa0262320:CDS | 25.0% |
!!! | CATTTCTAAACAAAAGCATT+TGG | + | chr2_2:61140842-61140861 | Msa0262320:CDS | 25.0% |
! | AGAATTTAAAGATCATGTGA+CGG | + | chr2_2:61141124-61141143 | Msa0262320:CDS | 25.0% |
! | TCAAATTATAACCAACTCAA+AGG | + | chr2_2:61141587-61141606 | Msa0262320:CDS | 25.0% |
! | TTAAAAAGAACTCCTTTGTT+TGG | - | chr2_2:61141613-61141632 | None:intergenic | 25.0% |
! | TAGAGAATTTGAAAGTAAAG+TGG | + | chr2_2:61141763-61141782 | Msa0262320:CDS | 25.0% |
! | GGACAAATTAAAGAATTTGA+AGG | + | chr2_2:61141860-61141879 | Msa0262320:CDS | 25.0% |
! | TTGATTTAAACTCCTTCATT+TGG | - | chr2_2:61141886-61141905 | None:intergenic | 25.0% |
! | ATGTTCAATTTAAGTGCTAT+TGG | + | chr2_2:61142169-61142188 | Msa0262320:intron | 25.0% |
!!! | GATATGTAATTTGTTGACTT+GGG | + | chr2_2:61142191-61142210 | Msa0262320:intron | 25.0% |
!!! | AAGACTTGAAAGTGTTTTTA+AGG | + | chr2_2:61142254-61142273 | Msa0262320:intron | 25.0% |
! | TACATTTACACAATCAATGA+AGG | - | chr2_2:61142321-61142340 | None:intergenic | 25.0% |
!! | TTCATTGATTGTGTAAATGT+AGG | + | chr2_2:61142320-61142339 | Msa0262320:intron | 25.0% |
! | TATTATTACTGCATTCAAGT+AGG | + | chr2_2:61142451-61142470 | Msa0262320:intron | 25.0% |
! | TAAAGAGTGATATTGTCTTA+TGG | + | chr2_2:61142490-61142509 | Msa0262320:intron | 25.0% |
! | TATTCAGCAGTTAAACATAT+GGG | + | chr2_2:61142699-61142718 | Msa0262320:intron | 25.0% |
!! | TTTAATTTATCGGATGGTAT+AGG | + | chr2_2:61142722-61142741 | Msa0262320:intron | 25.0% |
! | AAAGAACAAAATATGTGCTA+AGG | - | chr2_2:61142852-61142871 | None:intergenic | 25.0% |
!!! | ATTCATTTACTTTTATGCAG+TGG | + | chr2_2:61142925-61142944 | Msa0262320:intron | 25.0% |
TTTGTGTTGTAGTGTTTGAA+AGG | - | chr2_2:61140093-61140112 | None:intergenic | 30.0% | |
AACACAAACTTCACAATTCT+TGG | + | chr2_2:61140105-61140124 | Msa0262320:CDS | 30.0% | |
!! | TAATGTTGAAGGTTGATGAT+AGG | + | chr2_2:61140493-61140512 | Msa0262320:intron | 30.0% |
AATATGTGTGGAGATAGATT+TGG | + | chr2_2:61140536-61140555 | Msa0262320:CDS | 30.0% | |
! | TGGTGTCGAATATTATGATT+AGG | + | chr2_2:61140568-61140587 | Msa0262320:CDS | 30.0% |
! | GGTGTCGAATATTATGATTA+GGG | + | chr2_2:61140569-61140588 | Msa0262320:CDS | 30.0% |
GTGTCGAATATTATGATTAG+GGG | + | chr2_2:61140570-61140589 | Msa0262320:CDS | 30.0% | |
TGTCGAATATTATGATTAGG+GGG | + | chr2_2:61140571-61140590 | Msa0262320:CDS | 30.0% | |
GGAATTTGAGAAAAAAGAGA+TGG | + | chr2_2:61140797-61140816 | Msa0262320:CDS | 30.0% | |
TCGAAAGAAATGCAATATGA+AGG | + | chr2_2:61141209-61141228 | Msa0262320:CDS | 30.0% | |
AGAATTTGAATGTCAAGTGA+AGG | + | chr2_2:61141262-61141281 | Msa0262320:CDS | 30.0% | |
! | CCTTCATTTTACTTACAAGT+TGG | - | chr2_2:61141349-61141368 | None:intergenic | 30.0% |
CCAACTTGTAAGTAAAATGA+AGG | + | chr2_2:61141346-61141365 | Msa0262320:CDS | 30.0% | |
!! | AGGAGTTCTTTTTAAAAGAG+AGG | + | chr2_2:61141618-61141637 | Msa0262320:CDS | 30.0% |
!! | GGAGTTCTTTTTAAAAGAGA+GGG | + | chr2_2:61141619-61141638 | Msa0262320:CDS | 30.0% |
TGAAAGCAAAATGAAGAAAC+TGG | + | chr2_2:61141646-61141665 | Msa0262320:CDS | 30.0% | |
AGAATTTGAAAGTAAAGTGG+AGG | + | chr2_2:61141766-61141785 | Msa0262320:CDS | 30.0% | |
AAACACAATGCAACAGTTAA+AGG | - | chr2_2:61142149-61142168 | None:intergenic | 30.0% | |
!! | GGATATGTAATTTGTTGACT+TGG | + | chr2_2:61142190-61142209 | Msa0262320:intron | 30.0% |
AAGTCTTAACTGCTTAGAAA+TGG | - | chr2_2:61142241-61142260 | None:intergenic | 30.0% | |
TATGCATAAAATTAGGTCCA+GGG | - | chr2_2:61142415-61142434 | None:intergenic | 30.0% | |
ATATGCATAAAATTAGGTCC+AGG | - | chr2_2:61142416-61142435 | None:intergenic | 30.0% | |
! | CTGGATAAGCTTTATGTAAT+GGG | + | chr2_2:61142555-61142574 | Msa0262320:intron | 30.0% |
TCAATGACATCTAACGAATA+TGG | - | chr2_2:61142671-61142690 | None:intergenic | 30.0% | |
CATATGTTTAACTGCTGAAT+AGG | - | chr2_2:61142700-61142719 | None:intergenic | 30.0% | |
CTATTCAGCAGTTAAACATA+TGG | + | chr2_2:61142698-61142717 | Msa0262320:intron | 30.0% | |
! | TATGGGTTTAATTTATCGGA+TGG | + | chr2_2:61142716-61142735 | Msa0262320:intron | 30.0% |
AAGATAAAATGTAACAGCCA+GGG | - | chr2_2:61142819-61142838 | None:intergenic | 30.0% | |
ACAAAATATGTGCTAAGGAA+TGG | - | chr2_2:61142847-61142866 | None:intergenic | 30.0% | |
!!! | CTTGTTTTTGAAGAGGATAT+CGG | + | chr2_2:61142894-61142913 | Msa0262320:intron | 30.0% |
CACAATTCTTGGAGCAAAAA+TGG | + | chr2_2:61140116-61140135 | Msa0262320:CDS | 35.0% | |
AATTCTTGGAGCAAAAATGG+TGG | + | chr2_2:61140119-61140138 | Msa0262320:CDS | 35.0% | |
CTTATCTCTTGTTACAACGT+TGG | + | chr2_2:61140249-61140268 | Msa0262320:CDS | 35.0% | |
TTTCGCAGTTAGCGAAAAAA+GGG | - | chr2_2:61140279-61140298 | None:intergenic | 35.0% | |
CTATCCTTGAGAGAAAAGAT+GGG | - | chr2_2:61140458-61140477 | None:intergenic | 35.0% | |
TCAAGGATAGGATCAACTTT+GGG | + | chr2_2:61140468-61140487 | Msa0262320:intron | 35.0% | |
GATAGATTTGGATGGATGTT+TGG | + | chr2_2:61140548-61140567 | Msa0262320:CDS | 35.0% | |
CGAGTTAATCTCCAATATGA+AGG | + | chr2_2:61140597-61140616 | Msa0262320:CDS | 35.0% | |
CACAAGAAAGGTAATTGTGT+TGG | + | chr2_2:61140657-61140676 | Msa0262320:CDS | 35.0% | |
TAAGATTGAAGAGTTTGTCG+AGG | + | chr2_2:61140713-61140732 | Msa0262320:CDS | 35.0% | |
TTAAAAGAGAAGCAGCATGA+AGG | + | chr2_2:61140942-61140961 | Msa0262320:CDS | 35.0% | |
TGAAGGTCAAGTGATAGATT+TGG | + | chr2_2:61140992-61141011 | Msa0262320:CDS | 35.0% | |
!! | GATAGATTTGGTGACTGATT+TGG | + | chr2_2:61141004-61141023 | Msa0262320:CDS | 35.0% |
ATTGCATTTCTTTCGACTCA+AGG | - | chr2_2:61141205-61141224 | None:intergenic | 35.0% | |
AAGAAATGCAATATGAAGGC+CGG | + | chr2_2:61141213-61141232 | Msa0262320:CDS | 35.0% | |
CTAAACAGAAGCTGTTTGAA+AGG | + | chr2_2:61141294-61141313 | Msa0262320:CDS | 35.0% | |
AGAATTCGAAAGCCAAATGA+AGG | + | chr2_2:61141388-61141407 | Msa0262320:CDS | 35.0% | |
AAGAGAACCAAAATGAAGAC+CGG | + | chr2_2:61141465-61141484 | Msa0262320:CDS | 35.0% | |
TCAAAGAAGCGAGAATTTGA+AGG | + | chr2_2:61141503-61141522 | Msa0262320:CDS | 35.0% | |
AGAATTTGAAGGTCAAGTGA+AGG | + | chr2_2:61140986-61141005 | Msa0262320:CDS | 35.0% | |
TTGACTCAAACAGTTTGACT+TGG | - | chr2_2:61141571-61141590 | None:intergenic | 35.0% | |
! | GTGAAAAAGAGACGTTTTGA+AGG | + | chr2_2:61141671-61141690 | Msa0262320:CDS | 35.0% |
TCAACTCAAACATCTTCATC+TGG | - | chr2_2:61141697-61141716 | None:intergenic | 35.0% | |
TTGAAAGAGAAGCAACATGA+AGG | + | chr2_2:61141713-61141732 | Msa0262320:CDS | 35.0% | |
!! | AAAGATGCATTTTGAAAGCC+AGG | + | chr2_2:61141802-61141821 | Msa0262320:CDS | 35.0% |
TCCTTTCAATTGCATCTCTT+CGG | - | chr2_2:61141843-61141862 | None:intergenic | 35.0% | |
AGAATTTGAAGGCCAAATGA+AGG | + | chr2_2:61141871-61141890 | Msa0262320:CDS | 35.0% | |
! | AAAGCGAGAGAATTTTCTGA+AGG | + | chr2_2:61141905-61141924 | Msa0262320:CDS | 35.0% |
TGAAGGACAAAACGTAATCA+TGG | - | chr2_2:61142304-61142323 | None:intergenic | 35.0% | |
TTATGGTTTCTGCCAATGTT+AGG | + | chr2_2:61142507-61142526 | Msa0262320:intron | 35.0% | |
CCATTACATAAAGCTTATCC+AGG | - | chr2_2:61142557-61142576 | None:intergenic | 35.0% | |
! | CCTGGATAAGCTTTATGTAA+TGG | + | chr2_2:61142554-61142573 | Msa0262320:intron | 35.0% |
AACGAATATGGTTAACGCTA+TGG | - | chr2_2:61142659-61142678 | None:intergenic | 35.0% | |
! | ACTATACACCAGCTTTTAAG+TGG | - | chr2_2:61142790-61142809 | None:intergenic | 35.0% |
GAAGATAAAATGTAACAGCC+AGG | - | chr2_2:61142820-61142839 | None:intergenic | 35.0% | |
ATATGTGCTAAGGAATGGAT+TGG | - | chr2_2:61142842-61142861 | None:intergenic | 35.0% | |
!!! | TGTCTTGCTTGTTTTTGAAG+AGG | + | chr2_2:61142887-61142906 | Msa0262320:intron | 35.0% |
ATGCAAAGATTAACCTGTTC+TGG | + | chr2_2:61142984-61143003 | Msa0262320:CDS | 35.0% | |
TGCAAAGATTAACCTGTTCT+GGG | + | chr2_2:61142985-61143004 | Msa0262320:CDS | 35.0% | |
TCTCTAACTTCAAAACTTGC+AGG | - | chr2_2:61143061-61143080 | None:intergenic | 35.0% | |
!!! | TGCAAGTTTTGAAGTTAGAG+AGG | + | chr2_2:61143060-61143079 | Msa0262320:CDS | 35.0% |
! | CAAACCCTAACAGAGCTTTT+AGG | - | chr2_2:61139857-61139876 | None:intergenic | 40.0% |
TATGCTGTAATTGTTTGCGC+CGG | - | chr2_2:61139919-61139938 | None:intergenic | 40.0% | |
TCATCAGTCAGTGGAATATC+TGG | - | chr2_2:61139999-61140018 | None:intergenic | 40.0% | |
GACATTTCTTCATCAGTCAG+TGG | - | chr2_2:61140008-61140027 | None:intergenic | 40.0% | |
CTGATGAAGAAATGTCTCAC+TGG | + | chr2_2:61140012-61140031 | Msa0262320:CDS | 40.0% | |
! | CAATGAGAGTGTGTTTCCAT+GGG | - | chr2_2:61140043-61140062 | None:intergenic | 40.0% |
! | ACAATGAGAGTGTGTTTCCA+TGG | - | chr2_2:61140044-61140063 | None:intergenic | 40.0% |
TTCGCAGTTAGCGAAAAAAG+GGG | - | chr2_2:61140278-61140297 | None:intergenic | 40.0% | |
GTTTCGCAGTTAGCGAAAAA+AGG | - | chr2_2:61140280-61140299 | None:intergenic | 40.0% | |
TTTCGCTAACTGCGAAACAA+AGG | + | chr2_2:61140282-61140301 | Msa0262320:CDS | 40.0% | |
TTCGCTAACTGCGAAACAAA+GGG | + | chr2_2:61140283-61140302 | Msa0262320:CDS | 40.0% | |
!! | GATGGGTTACAAAGTTCCAT+CGG | - | chr2_2:61140441-61140460 | None:intergenic | 40.0% |
! | GTAACCCATCTTTTCTCTCA+AGG | + | chr2_2:61140451-61140470 | Msa0262320:intron | 40.0% |
CCTATCCTTGAGAGAAAAGA+TGG | - | chr2_2:61140459-61140478 | None:intergenic | 40.0% | |
! | CCATCTTTTCTCTCAAGGAT+AGG | + | chr2_2:61140456-61140475 | Msa0262320:intron | 40.0% |
CTCAAGGATAGGATCAACTT+TGG | + | chr2_2:61140467-61140486 | Msa0262320:intron | 40.0% | |
CAAGGATAGGATCAACTTTG+GGG | + | chr2_2:61140469-61140488 | Msa0262320:intron | 40.0% | |
AAGGATAGGATCAACTTTGG+GGG | + | chr2_2:61140470-61140489 | Msa0262320:intron | 40.0% | |
! | AACTTTGGGGGTAATGTTGA+AGG | + | chr2_2:61140482-61140501 | Msa0262320:intron | 40.0% |
!! | AAGGTTGATGATAGGCTAAG+TGG | + | chr2_2:61140501-61140520 | Msa0262320:intron | 40.0% |
!! | AGGTTGATGATAGGCTAAGT+GGG | + | chr2_2:61140502-61140521 | Msa0262320:intron | 40.0% |
GAAATACGCGAGAATATGTG+TGG | + | chr2_2:61140524-61140543 | Msa0262320:CDS | 40.0% | |
TGTGTGGAGATAGATTTGGA+TGG | + | chr2_2:61140540-61140559 | Msa0262320:CDS | 40.0% | |
CTCCAATATGAAGGACTTGA+CGG | + | chr2_2:61140606-61140625 | Msa0262320:CDS | 40.0% | |
TCCAATATGAAGGACTTGAC+GGG | + | chr2_2:61140607-61140626 | Msa0262320:CDS | 40.0% | |
GGTCAATATGGACACAAGAA+AGG | + | chr2_2:61140645-61140664 | Msa0262320:CDS | 40.0% | |
TGAAGTTTGCGAGAAAATGC+AGG | + | chr2_2:61140689-61140708 | Msa0262320:CDS | 40.0% | |
GAAGTTTGCGAGAAAATGCA+GGG | + | chr2_2:61140690-61140709 | Msa0262320:CDS | 40.0% | |
GGAAGTAGAGCTATGTTTGA+TGG | + | chr2_2:61140749-61140768 | Msa0262320:CDS | 40.0% | |
AGTAGAGCTATGTTTGATGG+AGG | + | chr2_2:61140752-61140771 | Msa0262320:CDS | 40.0% | |
TGTTTGATGGAGGACTTGAT+TGG | + | chr2_2:61140762-61140781 | Msa0262320:CDS | 40.0% | |
! | GATGGAGCTTTATCAAGTCA+TGG | + | chr2_2:61140815-61140834 | Msa0262320:CDS | 40.0% |
AGACAAAAGCAATTCGAGAG+CGG | + | chr2_2:61140903-61140922 | Msa0262320:CDS | 40.0% | |
!! | GCTGCTTCTCTTTTAACTCA+AGG | - | chr2_2:61140938-61140957 | None:intergenic | 40.0% |
!! | GCATTTTGAAAGCCGAATGA+AGG | + | chr2_2:61141040-61141059 | Msa0262320:CDS | 40.0% |
TCGACTCAAGTTCCTTCATT+CGG | - | chr2_2:61141055-61141074 | None:intergenic | 40.0% | |
TCGAAAGAGAAGCAACATGA+AGG | + | chr2_2:61141071-61141090 | Msa0262320:CDS | 40.0% | |
!! | GCTTTTTGAAAGCCGAATGA+AGG | + | chr2_2:61141178-61141197 | Msa0262320:CDS | 40.0% |
AGAAATGCAATATGAAGGCC+GGG | + | chr2_2:61141214-61141233 | Msa0262320:CDS | 40.0% | |
GCTGTTTGAAAGGCAAGTTA+AGG | + | chr2_2:61141304-61141323 | Msa0262320:CDS | 40.0% | |
TGAAAGGCAAGTTAAGGAGT+TGG | + | chr2_2:61141310-61141329 | Msa0262320:CDS | 40.0% | |
TCAATACCAGCTCCTTCATT+TGG | - | chr2_2:61141403-61141422 | None:intergenic | 40.0% | |
GCATTTCGAAAGTCGAATGA+AGG | + | chr2_2:61141430-61141449 | Msa0262320:CDS | 40.0% | |
AAGAGAAGCAACATGAAGGT+CGG | + | chr2_2:61141717-61141736 | Msa0262320:CDS | 40.0% | |
TCCGAAGAGATGCAATTGAA+AGG | + | chr2_2:61141839-61141858 | Msa0262320:CDS | 40.0% | |
CTGGTTTCAGATCTATCACT+CGG | - | chr2_2:61141931-61141950 | None:intergenic | 40.0% | |
CTATCAAAGACCATTCATCG+CGG | - | chr2_2:61142018-61142037 | None:intergenic | 40.0% | |
CTCACTCAGAATTTAAACCC+TGG | + | chr2_2:61142395-61142414 | Msa0262320:intron | 40.0% | |
TATCCAGGAAAGCTTCAGTT+AGG | - | chr2_2:61142542-61142561 | None:intergenic | 40.0% | |
TTTGCACACCACTTAAAAGC+TGG | + | chr2_2:61142779-61142798 | Msa0262320:intron | 40.0% | |
GCAAAGATTAACCTGTTCTG+GGG | + | chr2_2:61142986-61143005 | Msa0262320:CDS | 40.0% | |
AACGGCCTAAAAGCTCTGTT+AGG | + | chr2_2:61139849-61139868 | Msa0262320:CDS | 45.0% | |
ACGGCCTAAAAGCTCTGTTA+GGG | + | chr2_2:61139850-61139869 | Msa0262320:CDS | 45.0% | |
!!! | GCACGGTTGATTTGGTTTTC+CGG | - | chr2_2:61139885-61139904 | None:intergenic | 45.0% |
GAAAACCAAATCAACCGTGC+CGG | + | chr2_2:61139885-61139904 | Msa0262320:CDS | 45.0% | |
ATGGAAGAATGTGACGTTGC+AGG | + | chr2_2:61139972-61139991 | Msa0262320:CDS | 45.0% | |
TGGAAGAATGTGACGTTGCA+GGG | + | chr2_2:61139973-61139992 | Msa0262320:CDS | 45.0% | |
AGGTGAGATTTCGTTCAGCA+AGG | - | chr2_2:61140073-61140092 | None:intergenic | 45.0% | |
TACAATCATGCCCTCTACGA+CGG | + | chr2_2:61140206-61140225 | Msa0262320:CDS | 45.0% | |
AACTGCGAAACAAAGGGTTG+CGG | + | chr2_2:61140289-61140308 | Msa0262320:CDS | 45.0% | |
AACAAAGGGTTGCGGTAGTT+TGG | + | chr2_2:61140297-61140316 | Msa0262320:intron | 45.0% | |
TCCCGTCAAGTCCTTCATAT+TGG | - | chr2_2:61140611-61140630 | None:intergenic | 45.0% | |
GACTTGACGGGATATGCTTT+CGG | + | chr2_2:61140619-61140638 | Msa0262320:CDS | 45.0% | |
! | TGCTTTCGGTGTGGTCAATA+TGG | + | chr2_2:61140633-61140652 | Msa0262320:CDS | 45.0% |
! | TGTCGAGGATTTTGTAGCGA+AGG | + | chr2_2:61140728-61140747 | Msa0262320:CDS | 45.0% |
GCATTTGGAAAGCCAAGTGA+AGG | + | chr2_2:61140857-61140876 | Msa0262320:CDS | 45.0% | |
GAAGGAGCTGGTGAATGAAT+TGG | + | chr2_2:61140875-61140894 | Msa0262320:CDS | 45.0% | |
AAGAGAAGCAGCATGAAGGT+CGG | + | chr2_2:61140946-61140965 | Msa0262320:CDS | 45.0% | |
AAGAGAAGCAACATGAAGGC+CGG | + | chr2_2:61141075-61141094 | Msa0262320:CDS | 45.0% | |
TCGACTCAAGGTCCTTCATT+CGG | - | chr2_2:61141193-61141212 | None:intergenic | 45.0% | |
TGAATGTCAAGTGAAGGAGC+AGG | + | chr2_2:61141268-61141287 | Msa0262320:CDS | 45.0% | |
! | CCTTCATCCGGTCTTCATTT+TGG | - | chr2_2:61141475-61141494 | None:intergenic | 45.0% |
CCAAAATGAAGACCGGATGA+AGG | + | chr2_2:61141472-61141491 | Msa0262320:CDS | 45.0% | |
TTGAGTCATGCTCCTTCATC+CGG | - | chr2_2:61141487-61141506 | None:intergenic | 45.0% | |
! | CCTTTGTTTGGCCTTTGAGT+TGG | - | chr2_2:61141601-61141620 | None:intergenic | 45.0% |
CCAACTCAAAGGCCAAACAA+AGG | + | chr2_2:61141598-61141617 | Msa0262320:CDS | 45.0% | |
AGAGAAGCAACATGAAGGTC+GGG | + | chr2_2:61141718-61141737 | Msa0262320:CDS | 45.0% | |
TGAAAGTAAAGTGGAGGAGC+TGG | + | chr2_2:61141772-61141791 | Msa0262320:CDS | 45.0% | |
!! | GATGCATTTTGAAAGCCAGG+TGG | + | chr2_2:61141805-61141824 | Msa0262320:CDS | 45.0% |
! | CGAGTGATAGATCTGAAACC+AGG | + | chr2_2:61141929-61141948 | Msa0262320:CDS | 45.0% |
! | GATCTGAAACCAGGAACTGA+TGG | + | chr2_2:61141938-61141957 | Msa0262320:CDS | 45.0% |
! | AACTGATGGACACACTCTGA+CGG | + | chr2_2:61141952-61141971 | Msa0262320:CDS | 45.0% |
! | GAAGGTTGGTTGCTGTTCAT+CGG | + | chr2_2:61141976-61141995 | Msa0262320:CDS | 45.0% |
TTCCAGTTTCGTCTCCAACT+AGG | - | chr2_2:61142072-61142091 | None:intergenic | 45.0% | |
GTTGCGAGCTGTGAAGATTA+TGG | - | chr2_2:61142095-61142114 | None:intergenic | 45.0% | |
CTGCATTCAAGTAGGATGTG+AGG | + | chr2_2:61142459-61142478 | Msa0262320:intron | 45.0% | |
CAAGTAGGATGTGAGGAACT+AGG | + | chr2_2:61142466-61142485 | Msa0262320:intron | 45.0% | |
AGGACACTGAGTCCTAACAT+TGG | - | chr2_2:61142522-61142541 | None:intergenic | 45.0% | |
TGTCCTAACTGAAGCTTTCC+TGG | + | chr2_2:61142536-61142555 | Msa0262320:intron | 45.0% | |
CCTGCAGCTGGGATATATAT+GGG | - | chr2_2:61142621-61142640 | None:intergenic | 45.0% | |
CCATATATATCCCAGCTGCA+GGG | + | chr2_2:61142619-61142638 | Msa0262320:intron | 45.0% | |
TGGTTAACGCTATGGATGCA+TGG | - | chr2_2:61142651-61142670 | None:intergenic | 45.0% | |
TGGTGTATAGTAAGTTGCCC+TGG | + | chr2_2:61142799-61142818 | Msa0262320:intron | 45.0% | |
TCTGTTAGGGTTTGTCACGC+CGG | + | chr2_2:61139863-61139882 | Msa0262320:CDS | 50.0% | |
TTACAGCATACCACCACCTG+AGG | + | chr2_2:61139929-61139948 | Msa0262320:CDS | 50.0% | |
TACAGCATACCACCACCTGA+GGG | + | chr2_2:61139930-61139949 | Msa0262320:CDS | 50.0% | |
TGTCTCACTGGTCAAACCCA+TGG | + | chr2_2:61140024-61140043 | Msa0262320:CDS | 50.0% | |
TAAGAATCACCCACCGTCCA+AGG | - | chr2_2:61140233-61140252 | None:intergenic | 50.0% | |
! | AGGACTTGATTGGAGAGTGC+AGG | + | chr2_2:61140772-61140791 | Msa0262320:CDS | 50.0% |
CATTCACCAGCTCCTTCACT+TGG | - | chr2_2:61140872-61140891 | None:intergenic | 50.0% | |
GCAATTCGAGAGCGGAATGA+AGG | + | chr2_2:61140911-61140930 | Msa0262320:CDS | 50.0% | |
AGAGAAGCAGCATGAAGGTC+GGG | + | chr2_2:61140947-61140966 | Msa0262320:CDS | 50.0% | |
AGAGAAGCAACATGAAGGCC+GGG | + | chr2_2:61141076-61141095 | Msa0262320:CDS | 50.0% | |
TCGATTCATGCTCCTCTACC+CGG | - | chr2_2:61141097-61141116 | None:intergenic | 50.0% | |
TTGATCTGTGCTCCTTCACC+CGG | - | chr2_2:61141235-61141254 | None:intergenic | 50.0% | |
CGAAAGCCAAATGAAGGAGC+TGG | + | chr2_2:61141394-61141413 | Msa0262320:CDS | 50.0% | |
!! | GCATTTTGAAAGCCAGGTGG+AGG | + | chr2_2:61141808-61141827 | Msa0262320:CDS | 50.0% |
AGAGTGTGTCCATCAGTTCC+TGG | - | chr2_2:61141950-61141969 | None:intergenic | 50.0% | |
AAAGACCATTCATCGCGGCA+GGG | - | chr2_2:61142013-61142032 | None:intergenic | 50.0% | |
AACTAGGCATTCAGCGATGC+GGG | - | chr2_2:61142056-61142075 | None:intergenic | 50.0% | |
CAACTAGGCATTCAGCGATG+CGG | - | chr2_2:61142057-61142076 | None:intergenic | 50.0% | |
TGCCTAGTTGGAGACGAAAC+TGG | + | chr2_2:61142067-61142086 | Msa0262320:CDS | 50.0% | |
TTCACAGCTCGCAACGAACA+GGG | + | chr2_2:61142100-61142119 | Msa0262320:CDS | 50.0% | |
CCCATATATATCCCAGCTGC+AGG | + | chr2_2:61142618-61142637 | Msa0262320:intron | 50.0% | |
CCCTGCAGCTGGGATATATA+TGG | - | chr2_2:61142622-61142641 | None:intergenic | 50.0% | |
CAGTAGCACCAGGTTTCATG+AGG | - | chr2_2:61142952-61142971 | None:intergenic | 50.0% | |
CGCAGAATTACAGTAGCACC+AGG | - | chr2_2:61142962-61142981 | None:intergenic | 50.0% | |
!! | ACCTGTTCTGGGGACATATG+AGG | + | chr2_2:61142996-61143015 | Msa0262320:CDS | 50.0% |
CTGTGAGCTGTATACATCCC+CGG | - | chr2_2:61143036-61143055 | None:intergenic | 50.0% | |
TTGACACAACCCTCAGGTGG+TGG | - | chr2_2:61139942-61139961 | None:intergenic | 55.0% | |
CCACCTGAGGGTTGTGTCAA+CGG | + | chr2_2:61139942-61139961 | Msa0262320:CDS | 55.0% | |
GACGGGATATGCTTTCGGTG+TGG | + | chr2_2:61140624-61140643 | Msa0262320:CDS | 55.0% | |
! | CTTGATTGGAGAGTGCAGGC+AGG | + | chr2_2:61140776-61140795 | Msa0262320:CDS | 55.0% |
GGAAAGCCAAGTGAAGGAGC+TGG | + | chr2_2:61140863-61140882 | Msa0262320:CDS | 55.0% | |
GCAATATGAAGGCCGGGTGA+AGG | + | chr2_2:61141220-61141239 | Msa0262320:CDS | 55.0% | |
GCAACATGAAGGTCGGGTGA+AGG | + | chr2_2:61141724-61141743 | Msa0262320:CDS | 55.0% | |
TGGACACACTCTGACGGTGA+AGG | + | chr2_2:61141958-61141977 | Msa0262320:CDS | 55.0% | |
CACACTCTGACGGTGAAGGT+TGG | + | chr2_2:61141962-61141981 | Msa0262320:CDS | 55.0% | |
AAGACCATTCATCGCGGCAG+GGG | - | chr2_2:61142012-61142031 | None:intergenic | 55.0% | |
CAAAGACCATTCATCGCGGC+AGG | - | chr2_2:61142014-61142033 | None:intergenic | 55.0% | |
CGCATCGCTGAATGCCTAGT+TGG | + | chr2_2:61142055-61142074 | Msa0262320:CDS | 55.0% | |
CTTCACAGCTCGCAACGAAC+AGG | + | chr2_2:61142099-61142118 | Msa0262320:CDS | 55.0% | |
ATGGTTGCAACCCTGCAGCT+GGG | - | chr2_2:61142632-61142651 | None:intergenic | 55.0% | |
GCAGTGGACCTCATGAAACC+TGG | + | chr2_2:61142941-61142960 | Msa0262320:intron | 55.0% | |
GCCTCATATGTCCCCAGAAC+AGG | - | chr2_2:61143000-61143019 | None:intergenic | 55.0% | |
!! | GTTCTGGGGACATATGAGGC+TGG | + | chr2_2:61143000-61143019 | Msa0262320:CDS | 55.0% |
TGAGGCTGGCAGTTGATTGC+CGG | + | chr2_2:61143014-61143033 | Msa0262320:CDS | 55.0% | |
CAAATCAACCGTGCCGGAGC+CGG | + | chr2_2:61139891-61139910 | Msa0262320:CDS | 60.0% | |
! | GTAATTGTTTGCGCCGGCGC+CGG | - | chr2_2:61139913-61139932 | None:intergenic | 60.0% |
CCGTTGACACAACCCTCAGG+TGG | - | chr2_2:61139945-61139964 | None:intergenic | 60.0% | |
CCTGAGGGTTGTGTCAACGG+CGG | + | chr2_2:61139945-61139964 | Msa0262320:CDS | 60.0% | |
TTGTGTCAACGGCGGCGAGA+TGG | + | chr2_2:61139953-61139972 | Msa0262320:CDS | 60.0% | |
ATGCCCTCTACGACGGTCCT+TGG | + | chr2_2:61140213-61140232 | Msa0262320:CDS | 60.0% | |
CGTCCAAGGACCGTCGTAGA+GGG | - | chr2_2:61140219-61140238 | None:intergenic | 60.0% | |
CCTCTACGACGGTCCTTGGA+CGG | + | chr2_2:61140217-61140236 | Msa0262320:CDS | 60.0% | |
TACGACGGTCCTTGGACGGT+GGG | + | chr2_2:61140221-61140240 | Msa0262320:CDS | 60.0% | |
GCAACATGAAGGCCGGGTAG+AGG | + | chr2_2:61141082-61141101 | Msa0262320:CDS | 60.0% | |
CGGATTTGAGCTCCTCCACC+TGG | - | chr2_2:61141823-61141842 | None:intergenic | 60.0% | |
AGACCATTCATCGCGGCAGG+GGG | - | chr2_2:61142011-61142030 | None:intergenic | 60.0% | |
AGGCATTCAGCGATGCGGGA+GGG | - | chr2_2:61142052-61142071 | None:intergenic | 60.0% | |
TAGGCATTCAGCGATGCGGG+AGG | - | chr2_2:61142053-61142072 | None:intergenic | 60.0% | |
CATGGTTGCAACCCTGCAGC+TGG | - | chr2_2:61142633-61142652 | None:intergenic | 60.0% | |
GAGGCTGGCAGTTGATTGCC+GGG | + | chr2_2:61143015-61143034 | Msa0262320:CDS | 60.0% | |
AGGCTGGCAGTTGATTGCCG+GGG | + | chr2_2:61143016-61143035 | Msa0262320:CDS | 60.0% | |
CGGCTCCGGCACGGTTGATT+TGG | - | chr2_2:61139893-61139912 | None:intergenic | 65.0% | |
CCGCCGTTGACACAACCCTC+AGG | - | chr2_2:61139948-61139967 | None:intergenic | 65.0% | |
CCGTCCAAGGACCGTCGTAG+AGG | - | chr2_2:61140220-61140239 | None:intergenic | 65.0% | |
CTACGACGGTCCTTGGACGG+TGG | + | chr2_2:61140220-61140239 | Msa0262320:CDS | 65.0% | |
TTGCCCCCTGCCGCGATGAA+TGG | + | chr2_2:61142005-61142024 | Msa0262320:CDS | 65.0% | |
GGCATTCAGCGATGCGGGAG+GGG | - | chr2_2:61142051-61142070 | None:intergenic | 65.0% | |
! | AACCGTGCCGGAGCCGGCGC+CGG | + | chr2_2:61139897-61139916 | Msa0262320:CDS | 80.0% |
!!! | GTTTGCGCCGGCGCCGGCTC+CGG | - | chr2_2:61139907-61139926 | None:intergenic | 80.0% |
!!! | CGCCGGCGCCGGCTCCGGCA+CGG | - | chr2_2:61139902-61139921 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 61139843 | 61143135 | 61139843 | ID=Msa0262320;Name=Msa0262320 |
chr2_2 | mRNA | 61139843 | 61143135 | 61139843 | ID=Msa0262320-mRNA-1;Parent=Msa0262320;Name=Msa0262320-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.5|0|1|1|1|3|0|758 |
chr2_2 | exon | 61139843 | 61140310 | 61139843 | ID=Msa0262320-mRNA-1:exon:18828;Parent=Msa0262320-mRNA-1 |
chr2_2 | exon | 61140504 | 61142121 | 61140504 | ID=Msa0262320-mRNA-1:exon:18829;Parent=Msa0262320-mRNA-1 |
chr2_2 | exon | 61142945 | 61143135 | 61142945 | ID=Msa0262320-mRNA-1:exon:18830;Parent=Msa0262320-mRNA-1 |
chr2_2 | CDS | 61139843 | 61140310 | 61139843 | ID=Msa0262320-mRNA-1:cds;Parent=Msa0262320-mRNA-1 |
chr2_2 | CDS | 61140504 | 61142121 | 61140504 | ID=Msa0262320-mRNA-1:cds;Parent=Msa0262320-mRNA-1 |
chr2_2 | CDS | 61142945 | 61143135 | 61142945 | ID=Msa0262320-mRNA-1:cds;Parent=Msa0262320-mRNA-1 |
Gene Sequence |
Protein sequence |