Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262920 | XP_013465254.1 | 42.636 | 258 | 117 | 3 | 14 | 264 | 244 | 477 | 8.62e-33 | 138 |
| Msa0262920 | XP_013465254.1 | 81.787 | 291 | 32 | 2 | 1 | 277 | 277 | 560 | 1.04e-134 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262920 | A0A072VB92 | 42.636 | 258 | 117 | 3 | 14 | 264 | 244 | 477 | 4.12e-33 | 138 |
| Msa0262920 | A0A072VB92 | 81.787 | 291 | 32 | 2 | 1 | 277 | 277 | 560 | 4.96e-135 | 404 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221260 | Msa0262920 | 0.867698 | 1.130051e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262920 | MtrunA17_Chr2g0325231 | 60.197 | 304 | 85 | 4 | 12 | 283 | 420 | 719 | 4.32e-86 | 276 |
| Msa0262920 | MtrunA17_Chr2g0325231 | 47.917 | 240 | 79 | 3 | 2 | 199 | 470 | 705 | 1.94e-40 | 150 |
| Msa0262920 | MtrunA17_Chr2g0325231 | 44.364 | 275 | 128 | 3 | 1 | 264 | 248 | 508 | 1.77e-38 | 144 |
| Msa0262920 | MtrunA17_Chr2g0325231 | 45.382 | 249 | 119 | 3 | 14 | 255 | 215 | 453 | 4.51e-38 | 143 |
| Msa0262920 | MtrunA17_Chr2g0325231 | 39.863 | 291 | 146 | 6 | 2 | 264 | 138 | 427 | 1.84e-31 | 124 |
| Msa0262920 | MtrunA17_Chr2g0325691 | 56.169 | 308 | 103 | 4 | 1 | 277 | 418 | 724 | 8.77e-78 | 251 |
| Msa0262920 | MtrunA17_Chr2g0325691 | 46.199 | 342 | 112 | 4 | 1 | 270 | 250 | 591 | 1.04e-55 | 192 |
| Msa0262920 | MtrunA17_Chr2g0325691 | 51.037 | 241 | 114 | 1 | 28 | 264 | 217 | 457 | 4.53e-44 | 159 |
| Msa0262920 | MtrunA17_Chr2g0325691 | 39.560 | 273 | 120 | 6 | 2 | 255 | 118 | 364 | 3.63e-20 | 90.9 |
| Msa0262920 | MtrunA17_Chr2g0325701 | 51.815 | 303 | 103 | 5 | 2 | 276 | 137 | 424 | 5.24e-68 | 222 |
| Msa0262920 | MtrunA17_Chr2g0325701 | 40.397 | 151 | 90 | 0 | 1 | 151 | 261 | 411 | 1.11e-17 | 83.6 |
| Msa0262920 | MtrunA17_Chr2g0325751 | 78.065 | 155 | 24 | 2 | 136 | 290 | 2 | 146 | 1.69e-67 | 207 |
| Msa0262920 | MtrunA17_Chr2g0325751 | 47.059 | 119 | 56 | 1 | 53 | 171 | 3 | 114 | 1.18e-17 | 78.6 |
| Msa0262920 | MtrunA17_Chr2g0325751 | 44.355 | 124 | 62 | 1 | 1 | 117 | 7 | 130 | 4.04e-15 | 71.6 |
| Msa0262920 | MtrunA17_Chr2g0325751 | 40.945 | 127 | 68 | 1 | 15 | 141 | 7 | 126 | 2.03e-14 | 69.7 |
| Msa0262920 | MtrunA17_Chr2g0325751 | 39.231 | 130 | 72 | 1 | 29 | 158 | 7 | 129 | 2.98e-13 | 66.6 |
| Msa0262920 | MtrunA17_Chr2g0325641 | 55.957 | 277 | 101 | 4 | 1 | 277 | 57 | 312 | 8.19e-67 | 212 |
| Msa0262920 | MtrunA17_Chr2g0325641 | 42.791 | 215 | 102 | 1 | 43 | 257 | 1 | 194 | 6.09e-29 | 113 |
| Msa0262920 | MtrunA17_Chr2g0325641 | 38.509 | 161 | 97 | 1 | 127 | 287 | 1 | 159 | 3.93e-15 | 74.7 |
| Msa0262920 | MtrunA17_Chr2g0325641 | 44.000 | 125 | 49 | 2 | 1 | 104 | 190 | 314 | 2.80e-13 | 69.3 |
| Msa0262920 | MtrunA17_Chr5g0434751 | 52.465 | 284 | 121 | 2 | 1 | 277 | 1 | 277 | 1.95e-61 | 197 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 53.600 | 250 | 116 | 0 | 8 | 257 | 457 | 706 | 4.55e-61 | 209 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 46.667 | 315 | 105 | 2 | 1 | 252 | 492 | 806 | 3.56e-59 | 204 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 47.368 | 285 | 132 | 2 | 1 | 267 | 390 | 674 | 2.99e-51 | 181 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 45.421 | 273 | 131 | 1 | 1 | 255 | 334 | 606 | 3.29e-47 | 169 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 46.840 | 269 | 125 | 2 | 4 | 254 | 295 | 563 | 1.37e-44 | 162 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 41.319 | 288 | 109 | 3 | 28 | 255 | 263 | 550 | 6.51e-38 | 142 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 39.485 | 233 | 133 | 2 | 27 | 255 | 238 | 466 | 3.46e-24 | 102 |
| Msa0262920 | MtrunA17_Chr2g0325361 | 40.373 | 161 | 96 | 0 | 97 | 257 | 262 | 422 | 1.85e-16 | 80.1 |
| Msa0262920 | MtrunA17_Chr2g0325661 | 46.769 | 325 | 124 | 4 | 1 | 276 | 283 | 607 | 4.75e-60 | 205 |
| Msa0262920 | MtrunA17_Chr2g0325661 | 33.721 | 344 | 128 | 8 | 10 | 255 | 126 | 467 | 3.44e-22 | 97.1 |
| Msa0262920 | MtrunA17_Chr2g0325281 | 45.345 | 333 | 105 | 3 | 4 | 280 | 285 | 596 | 8.42e-57 | 193 |
| Msa0262920 | MtrunA17_Chr2g0325281 | 50.711 | 211 | 76 | 2 | 1 | 211 | 408 | 590 | 2.05e-37 | 140 |
| Msa0262920 | MtrunA17_Chr2g0325281 | 41.667 | 228 | 119 | 1 | 28 | 255 | 253 | 466 | 3.43e-34 | 131 |
| Msa0262920 | MtrunA17_Chr2g0325281 | 41.228 | 228 | 130 | 1 | 30 | 257 | 217 | 440 | 1.64e-31 | 123 |
| Msa0262920 | MtrunA17_Chr2g0325281 | 42.857 | 175 | 100 | 0 | 97 | 271 | 252 | 426 | 1.39e-25 | 106 |
| Msa0262920 | MtrunA17_Chr2g0325281 | 33.758 | 314 | 130 | 11 | 19 | 267 | 108 | 408 | 3.72e-13 | 69.7 |
| Msa0262920 | MtrunA17_Chr2g0325761 | 47.134 | 314 | 117 | 4 | 1 | 265 | 278 | 591 | 5.77e-56 | 192 |
| Msa0262920 | MtrunA17_Chr2g0325761 | 40.625 | 288 | 157 | 1 | 2 | 275 | 237 | 524 | 1.21e-36 | 138 |
| Msa0262920 | MtrunA17_Chr2g0325761 | 40.316 | 253 | 113 | 7 | 31 | 255 | 220 | 462 | 8.93e-27 | 110 |
| Msa0262920 | MtrunA17_Chr2g0325761 | 32.271 | 251 | 128 | 6 | 22 | 265 | 166 | 381 | 1.24e-12 | 68.2 |
| Msa0262920 | MtrunA17_Chr2g0325861 | 40.806 | 397 | 139 | 5 | 1 | 301 | 295 | 691 | 2.88e-53 | 186 |
| Msa0262920 | MtrunA17_Chr2g0325861 | 38.462 | 338 | 134 | 4 | 3 | 270 | 259 | 592 | 7.69e-43 | 157 |
| Msa0262920 | MtrunA17_Chr2g0325861 | 36.066 | 305 | 150 | 4 | 4 | 270 | 225 | 522 | 8.29e-30 | 119 |
| Msa0262920 | MtrunA17_Chr2g0325861 | 37.768 | 233 | 115 | 6 | 52 | 264 | 210 | 432 | 9.56e-15 | 74.7 |
| Msa0262920 | MtrunA17_Chr2g0325221 | 48.110 | 291 | 119 | 3 | 13 | 275 | 311 | 597 | 5.21e-53 | 184 |
| Msa0262920 | MtrunA17_Chr2g0325221 | 37.751 | 249 | 110 | 6 | 30 | 264 | 275 | 492 | 1.43e-19 | 89.0 |
| Msa0262920 | MtrunA17_Chr2g0325221 | 33.447 | 293 | 156 | 7 | 2 | 255 | 177 | 469 | 6.03e-19 | 87.4 |
| Msa0262920 | MtrunA17_Chr2g0325321 | 48.322 | 298 | 98 | 3 | 4 | 245 | 285 | 582 | 8.41e-51 | 179 |
| Msa0262920 | MtrunA17_Chr2g0325321 | 42.647 | 272 | 114 | 1 | 28 | 257 | 253 | 524 | 1.01e-38 | 145 |
| Msa0262920 | MtrunA17_Chr2g0325321 | 49.537 | 216 | 81 | 2 | 1 | 216 | 408 | 595 | 2.73e-37 | 140 |
| Msa0262920 | MtrunA17_Chr2g0325321 | 37.354 | 257 | 140 | 3 | 25 | 267 | 212 | 461 | 2.31e-22 | 97.4 |
| Msa0262920 | MtrunA17_Chr2g0325321 | 36.471 | 255 | 139 | 4 | 23 | 254 | 169 | 423 | 3.51e-17 | 82.0 |
| Msa0262920 | MtrunA17_Chr2g0325711 | 44.828 | 290 | 150 | 1 | 1 | 280 | 279 | 568 | 1.11e-50 | 179 |
| Msa0262920 | MtrunA17_Chr2g0325711 | 35.357 | 280 | 162 | 3 | 3 | 264 | 152 | 430 | 1.76e-23 | 100 |
| Msa0262920 | MtrunA17_Chr2g0325351 | 49.231 | 260 | 102 | 4 | 16 | 250 | 147 | 401 | 6.40e-45 | 162 |
| Msa0262920 | MtrunA17_Chr2g0325351 | 44.670 | 197 | 106 | 1 | 13 | 209 | 223 | 416 | 7.39e-27 | 110 |
| Msa0262920 | MtrunA17_Chr2g0325351 | 37.759 | 241 | 140 | 4 | 18 | 258 | 137 | 367 | 2.34e-19 | 88.6 |
| Msa0262920 | MtrunA17_Chr2g0325351 | 45.399 | 163 | 78 | 1 | 1 | 152 | 253 | 415 | 7.40e-18 | 84.0 |
| Msa0262920 | MtrunA17_Chr2g0325611 | 58.696 | 184 | 67 | 2 | 90 | 273 | 144 | 318 | 2.71e-43 | 156 |
| Msa0262920 | MtrunA17_Chr2g0325611 | 45.399 | 163 | 70 | 2 | 65 | 208 | 147 | 309 | 1.93e-23 | 100 |
| Msa0262920 | MtrunA17_Chr2g0325611 | 41.436 | 181 | 97 | 2 | 20 | 200 | 144 | 315 | 6.58e-22 | 95.9 |
| Msa0262920 | MtrunA17_Chr2g0325611 | 40.506 | 158 | 75 | 2 | 1 | 139 | 153 | 310 | 8.90e-15 | 74.7 |
| Msa0262920 | MtrunA17_Chr2g0325611 | 40.000 | 150 | 83 | 1 | 1 | 143 | 179 | 328 | 5.56e-14 | 72.4 |
| Msa0262920 | MtrunA17_Chr2g0325621 | 54.211 | 190 | 73 | 1 | 87 | 276 | 223 | 398 | 5.16e-42 | 153 |
| Msa0262920 | MtrunA17_Chr2g0325621 | 41.935 | 155 | 90 | 0 | 3 | 157 | 223 | 377 | 4.40e-17 | 81.6 |
| Msa0262920 | MtrunA17_Chr2g0325621 | 36.723 | 177 | 98 | 2 | 31 | 200 | 223 | 392 | 2.84e-15 | 76.3 |
| Msa0262920 | MtrunA17_Chr2g0325621 | 34.839 | 155 | 87 | 1 | 1 | 141 | 249 | 403 | 5.22e-13 | 69.3 |
| Msa0262920 | MtrunA17_Chr6g0471251 | 48.249 | 257 | 123 | 1 | 30 | 276 | 242 | 498 | 1.76e-40 | 150 |
| Msa0262920 | MtrunA17_Chr6g0471251 | 39.450 | 218 | 104 | 2 | 6 | 195 | 270 | 487 | 6.41e-26 | 107 |
| Msa0262920 | MtrunA17_Chr6g0471251 | 40.000 | 185 | 83 | 1 | 1 | 157 | 293 | 477 | 3.36e-19 | 88.2 |
| Msa0262920 | MtrunA17_Chr6g0471251 | 32.830 | 265 | 164 | 3 | 16 | 270 | 162 | 422 | 3.12e-17 | 82.0 |
| Msa0262920 | MtrunA17_Chr2g0280141 | 39.506 | 324 | 164 | 5 | 1 | 294 | 252 | 573 | 4.37e-40 | 149 |
| Msa0262920 | MtrunA17_Chr2g0280141 | 36.994 | 346 | 155 | 10 | 4 | 302 | 283 | 612 | 2.77e-34 | 132 |
| Msa0262920 | MtrunA17_Chr2g0280141 | 36.686 | 169 | 101 | 1 | 1 | 163 | 406 | 574 | 1.10e-14 | 74.7 |
| Msa0262920 | MtrunA17_Chr2g0280141 | 34.404 | 218 | 76 | 3 | 105 | 255 | 191 | 408 | 1.18e-14 | 74.3 |
| Msa0262920 | MtrunA17_Chr2g0325811 | 39.482 | 309 | 150 | 4 | 5 | 285 | 285 | 584 | 1.81e-39 | 147 |
| Msa0262920 | MtrunA17_Chr2g0325241 | 37.162 | 296 | 164 | 4 | 22 | 306 | 120 | 404 | 7.29e-37 | 136 |
| Msa0262920 | MtrunA17_Chr2g0325241 | 37.915 | 211 | 92 | 3 | 7 | 182 | 119 | 325 | 1.06e-21 | 94.7 |
| Msa0262920 | MtrunA17_Chr7g0235901 | 40.840 | 262 | 124 | 4 | 19 | 251 | 52 | 311 | 5.05e-34 | 126 |
| Msa0262920 | MtrunA17_Chr7g0235901 | 46.907 | 194 | 93 | 1 | 15 | 208 | 127 | 310 | 1.86e-33 | 124 |
| Msa0262920 | MtrunA17_Chr7g0235901 | 52.695 | 167 | 65 | 1 | 1 | 167 | 159 | 311 | 2.10e-31 | 119 |
| Msa0262920 | MtrunA17_Chr7g0235901 | 33.884 | 242 | 121 | 8 | 41 | 255 | 44 | 273 | 2.01e-14 | 72.4 |
| Msa0262920 | MtrunA17_Chr2g0325651 | 53.125 | 160 | 65 | 2 | 34 | 186 | 227 | 383 | 2.89e-33 | 125 |
| Msa0262920 | MtrunA17_Chr2g0325651 | 40.385 | 260 | 114 | 6 | 20 | 255 | 140 | 382 | 1.45e-27 | 110 |
| Msa0262920 | MtrunA17_Chr2g0325651 | 48.921 | 139 | 61 | 2 | 1 | 132 | 250 | 385 | 1.84e-20 | 90.5 |
| Msa0262920 | MtrunA17_Chr2g0325651 | 34.221 | 263 | 154 | 7 | 20 | 264 | 105 | 366 | 1.22e-14 | 73.9 |
| Msa0262920 | MtrunA17_Chr5g0416271 | 49.412 | 170 | 71 | 2 | 5 | 159 | 148 | 317 | 1.01e-30 | 120 |
| Msa0262920 | MtrunA17_Chr5g0416271 | 44.767 | 172 | 94 | 1 | 44 | 215 | 147 | 317 | 7.03e-28 | 112 |
| Msa0262920 | MtrunA17_Chr5g0416271 | 44.253 | 174 | 97 | 0 | 98 | 271 | 158 | 331 | 1.42e-24 | 103 |
| Msa0262920 | MtrunA17_Chr2g0325721 | 41.245 | 257 | 119 | 3 | 28 | 270 | 262 | 500 | 1.29e-29 | 117 |
| Msa0262920 | MtrunA17_Chr2g0325721 | 42.326 | 215 | 124 | 0 | 1 | 215 | 287 | 501 | 7.98e-25 | 103 |
| Msa0262920 | MtrunA17_Chr2g0325791 | 52.381 | 147 | 65 | 2 | 58 | 200 | 24 | 169 | 1.93e-28 | 111 |
| Msa0262920 | MtrunA17_Chr2g0325791 | 47.328 | 131 | 59 | 1 | 15 | 145 | 36 | 156 | 2.56e-18 | 84.0 |
| Msa0262920 | MtrunA17_Chr2g0325791 | 42.857 | 133 | 58 | 2 | 118 | 246 | 41 | 159 | 7.57e-13 | 68.2 |
| Msa0262920 | MtrunA17_Chr2g0332961 | 45.024 | 211 | 80 | 6 | 79 | 287 | 74 | 250 | 1.28e-22 | 96.3 |
| Msa0262920 | MtrunA17_Chr2g0333341 | 44.375 | 160 | 84 | 3 | 2 | 161 | 295 | 449 | 8.38e-21 | 92.8 |
| Msa0262920 | MtrunA17_Chr2g0333341 | 37.619 | 210 | 105 | 4 | 7 | 216 | 265 | 448 | 2.53e-20 | 91.3 |
| Msa0262920 | MtrunA17_Chr2g0333341 | 43.697 | 119 | 66 | 1 | 1 | 119 | 332 | 449 | 2.23e-12 | 67.4 |
| Msa0262920 | MtrunA17_Chr2g0333341 | 36.667 | 150 | 66 | 2 | 108 | 257 | 327 | 447 | 9.78e-12 | 65.5 |
| Msa0262920 | MtrunA17_Chr2g0325211 | 39.303 | 201 | 101 | 3 | 95 | 295 | 3 | 182 | 2.28e-18 | 81.3 |
| Msa0262920 | MtrunA17_Chr2g0325211 | 42.353 | 170 | 74 | 4 | 10 | 169 | 2 | 157 | 7.32e-16 | 74.3 |
| Msa0262920 | MtrunA17_Chr2g0325211 | 39.130 | 161 | 80 | 2 | 52 | 198 | 2 | 158 | 1.95e-15 | 73.2 |
| Msa0262920 | MtrunA17_Chr2g0325211 | 38.922 | 167 | 96 | 2 | 1 | 167 | 7 | 167 | 5.37e-14 | 69.3 |
| Msa0262920 | MtrunA17_Chr2g0325781 | 40.805 | 174 | 84 | 5 | 20 | 177 | 135 | 305 | 9.55e-16 | 76.3 |
| Msa0262920 | MtrunA17_Chr2g0325781 | 67.213 | 61 | 20 | 0 | 1 | 61 | 241 | 301 | 1.00e-14 | 73.2 |
| Msa0262920 | MtrunA17_Chr2g0325261 | 38.000 | 200 | 94 | 7 | 13 | 197 | 122 | 306 | 1.62e-15 | 75.5 |
| Msa0262920 | MtrunA17_Chr2g0325261 | 33.755 | 237 | 125 | 7 | 16 | 245 | 87 | 298 | 3.54e-11 | 62.8 |
| Msa0262920 | MtrunA17_Chr2g0325341 | 38.000 | 200 | 94 | 7 | 13 | 197 | 122 | 306 | 1.62e-15 | 75.5 |
| Msa0262920 | MtrunA17_Chr2g0325341 | 33.755 | 237 | 125 | 7 | 16 | 245 | 87 | 298 | 3.54e-11 | 62.8 |
| Msa0262920 | MtrunA17_Chr5g0434741 | 36.598 | 194 | 90 | 4 | 19 | 194 | 125 | 303 | 1.93e-15 | 75.5 |
| Msa0262920 | MtrunA17_Chr5g0434741 | 46.739 | 92 | 49 | 0 | 34 | 125 | 213 | 304 | 1.88e-11 | 63.9 |
| Msa0262920 | MtrunA17_Chr2g0325201 | 41.045 | 134 | 76 | 1 | 20 | 153 | 98 | 228 | 1.99e-15 | 73.9 |
| Msa0262920 | MtrunA17_Chr2g0325201 | 42.574 | 101 | 56 | 1 | 110 | 208 | 127 | 227 | 7.03e-11 | 61.2 |
| Msa0262920 | MtrunA17_Chr2g0325201 | 40.404 | 99 | 59 | 0 | 13 | 111 | 130 | 228 | 9.73e-11 | 60.8 |
| Msa0262920 | MtrunA17_Chr2g0325731 | 63.793 | 58 | 21 | 0 | 1 | 58 | 1 | 58 | 1.35e-14 | 67.8 |
| Msa0262920 | MtrunA17_Chr2g0325731 | 60.345 | 58 | 23 | 0 | 57 | 114 | 1 | 58 | 5.75e-13 | 63.2 |
| Msa0262920 | MtrunA17_Chr2g0325731 | 55.172 | 58 | 26 | 0 | 99 | 156 | 1 | 58 | 1.23e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGTCAAAATAGTTCATTAA+TGG | 0.190625 | 2_2:+61937942 | None:intergenic |
| TCAAAGCTTAATAAATTTGA+TGG | 0.323581 | 2_2:-61938005 | Msa0262920:CDS |
| TCAAAAGAGGAGGAGTTTAA+AGG | 0.367324 | 2_2:-61938257 | Msa0262920:CDS |
| TATAACACAACAAAACAATC+TGG | 0.368004 | 2_2:+61936815 | None:intergenic |
| TATAAAGAGAAGCAACTTGA+TGG | 0.408541 | 2_2:-61938551 | Msa0262920:CDS |
| AATTTATTAAGCTTTGACTC+TGG | 0.434556 | 2_2:+61938011 | None:intergenic |
| TTAAAAGACAAGCAATTTGA+AGG | 0.442022 | 2_2:-61938047 | Msa0262920:CDS |
| GAGAATAAGTTCAAAGTACT+AGG | 0.444546 | 2_2:-61938083 | Msa0262920:CDS |
| TTGATTCATGCTCCTTCACC+CGG | 0.446148 | 2_2:+61938696 | None:intergenic |
| CTGATTCCAACTCCTTCACT+CGG | 0.451492 | 2_2:+61938360 | None:intergenic |
| GAAGGAGGAATTCAAAGGTC+AGG | 0.471633 | 2_2:-61938210 | Msa0262920:CDS |
| ATCTCAGTTCTCAATTCAAT+AGG | 0.471979 | 2_2:+61936839 | None:intergenic |
| TCAAAAGAAAAGCAATTTGA+AGG | 0.472186 | 2_2:-61938299 | Msa0262920:CDS |
| TTGATTCAAACTCCTTTGCT+CGG | 0.482976 | 2_2:+61938402 | None:intergenic |
| GCAATTGAAAGGACAAGTTA+AGG | 0.485918 | 2_2:-61938582 | Msa0262920:CDS |
| AAAGCAGCAATTTGAAAGCC+AGG | 0.488186 | 2_2:-61938168 | Msa0262920:CDS |
| ATATAGGTGAGCAAGCTTCA+AGG | 0.494709 | 2_2:-61936889 | Msa0262920:intron |
| TAGAGAAGCAACGTGAAGGC+CGG | 0.495003 | 2_2:-61938715 | Msa0262920:CDS |
| GAAGGAGTTTGAATCAAAGA+AGG | 0.501648 | 2_2:-61938228 | Msa0262920:CDS |
| AGAGAAGCAACGTGAAGGCC+GGG | 0.511489 | 2_2:-61938714 | Msa0262920:CDS |
| TCAAAAGAGGATGAATTTGA+AGG | 0.517933 | 2_2:-61938383 | Msa0262920:CDS |
| AAAAGAAGCATTTCGAGAGC+AGG | 0.517991 | 2_2:-61938337 | Msa0262920:CDS |
| TAGATTCCAGCTCCTTCACA+TGG | 0.519246 | 2_2:+61938486 | None:intergenic |
| TAAATTTGATGGACAAGTGA+AGG | 0.519927 | 2_2:-61937994 | Msa0262920:CDS |
| GTGATTTGAACTCCTCCACT+TGG | 0.520171 | 2_2:+61938612 | None:intergenic |
| GCAACGTGAAGGCCGGGTGA+AGG | 0.522564 | 2_2:-61938708 | Msa0262920:CDS |
| AGAACAGCGGAAAGAATTTG+AGG | 0.529889 | 2_2:-61938111 | Msa0262920:CDS |
| TATTGTTTCACTGTCAACTC+AGG | 0.532627 | 2_2:+61937969 | None:intergenic |
| TTTGACGAGGAAACAGAATC+GGG | 0.535253 | 2_2:-61937927 | Msa0262920:intron |
| CGAAGGCCATGTGAAGGAGC+TGG | 0.538482 | 2_2:-61938492 | Msa0262920:CDS |
| TATAGGTGAGCAAGCTTCAA+GGG | 0.544958 | 2_2:-61936888 | Msa0262920:intron |
| GGAGTTTGAATCAAAGAAGG+AGG | 0.550239 | 2_2:-61938225 | Msa0262920:CDS |
| TGAATTTGAAGGCCGAGTGA+AGG | 0.551409 | 2_2:-61938372 | Msa0262920:CDS |
| ATAACACAACAAAACAATCT+GGG | 0.552111 | 2_2:+61936816 | None:intergenic |
| AAAGGAGTTTGAATCAAAAG+AGG | 0.554492 | 2_2:-61938396 | Msa0262920:CDS |
| TGAAGAGCAAGTGAAGGAGC+TGG | 0.555980 | 2_2:-61938660 | Msa0262920:CDS |
| GAAAATCGATGGCCGAGCAA+AGG | 0.564000 | 2_2:-61938414 | Msa0262920:CDS |
| GCAATTTGAAGGACAAGTGA+AGG | 0.564315 | 2_2:-61938288 | Msa0262920:CDS |
| GCAATTTGAAGGACAAGTCA+AGG | 0.571346 | 2_2:-61938036 | Msa0262920:CDS |
| GGAGTTTAAAGGTCAAGTGA+AGG | 0.577732 | 2_2:-61938246 | Msa0262920:CDS |
| GAAGGAGTTCCAGTCAAAAG+AGG | 0.579907 | 2_2:-61938270 | Msa0262920:CDS |
| AGAATAAGTTCAAAGTACTA+GGG | 0.580517 | 2_2:-61938082 | Msa0262920:CDS |
| TCACAACAGAGGCAATTGAA+AGG | 0.580934 | 2_2:-61938593 | Msa0262920:CDS |
| GCATTTCGAGAGCAGGCTGA+AGG | 0.586547 | 2_2:-61938330 | Msa0262920:CDS |
| TGAAGGCCGAGTGAAGGAGT+TGG | 0.591089 | 2_2:-61938366 | Msa0262920:CDS |
| TCAAAGAAGGAGGAATTCAA+AGG | 0.609408 | 2_2:-61938215 | Msa0262920:CDS |
| TCAATAGAGAAGCAACGTGA+AGG | 0.616536 | 2_2:-61938719 | Msa0262920:CDS |
| GGAGTTCCAGTCAAAAGAGG+AGG | 0.632267 | 2_2:-61938267 | Msa0262920:CDS |
| TGTAAAGAGAAGAAAATCGA+TGG | 0.632784 | 2_2:-61938425 | Msa0262920:CDS |
| AGAATTCGAAGGCCATGTGA+AGG | 0.636837 | 2_2:-61938498 | Msa0262920:CDS |
| AGAAGCAATTTGAAGAACAG+CGG | 0.652301 | 2_2:-61938124 | Msa0262920:CDS |
| GAAGCAACTTGATGGACGAG+TGG | 0.655238 | 2_2:-61938543 | Msa0262920:CDS |
| AGGAGTTCAAATCACAACAG+AGG | 0.718141 | 2_2:-61938604 | Msa0262920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTAAAAAAACAATTC+AGG | + | chr2_2:61938606-61938625 | None:intergenic | 10.0% |
| !!! | TTTTGTTATGTTATATATAT+TGG | - | chr2_2:61938629-61938648 | Msa0262920:CDS | 10.0% |
| !!! | TTTGTTATGTTATATATATT+GGG | - | chr2_2:61938630-61938649 | Msa0262920:CDS | 10.0% |
| !! | AAAATTTAAAAAAACAATTC+AGG | + | chr2_2:61938606-61938625 | None:intergenic | 10.0% |
| !!! | TTTTGTTATGTTATATATAT+TGG | - | chr2_2:61938629-61938648 | Msa0262920:CDS | 10.0% |
| !!! | TTTGTTATGTTATATATATT+GGG | - | chr2_2:61938630-61938649 | Msa0262920:CDS | 10.0% |
| !! | TTGTTATGTTATATATATTG+GGG | - | chr2_2:61938631-61938650 | Msa0262920:CDS | 15.0% |
| !! | TTGTTATGTTATATATATTG+GGG | - | chr2_2:61938631-61938650 | Msa0262920:CDS | 15.0% |
| !! | TCAAAGCTTAATAAATTTGA+TGG | - | chr2_2:61937543-61937562 | Msa0262920:intron | 20.0% |
| !!! | CAATTATCCAAAGTATTTAA+AGG | - | chr2_2:61938283-61938302 | Msa0262920:CDS | 20.0% |
| !! | TCAAAGCTTAATAAATTTGA+TGG | - | chr2_2:61937543-61937562 | Msa0262920:intron | 20.0% |
| !!! | CAATTATCCAAAGTATTTAA+AGG | - | chr2_2:61938283-61938302 | Msa0262920:CDS | 20.0% |
| ! | TCAAAAAATAGAGAATTCGA+AGG | - | chr2_2:61937039-61937058 | Msa0262920:intron | 25.0% |
| ! | TCAAAAGAAAAGCAATTTGA+AGG | - | chr2_2:61937249-61937268 | Msa0262920:intron | 25.0% |
| !! | AGAATAAGTTCAAAGTACTA+GGG | - | chr2_2:61937466-61937485 | Msa0262920:intron | 25.0% |
| ! | TTAAAAGACAAGCAATTTGA+AGG | - | chr2_2:61937501-61937520 | Msa0262920:intron | 25.0% |
| !! | AATTTATTAAGCTTTGACTC+TGG | + | chr2_2:61937540-61937559 | None:intergenic | 25.0% |
| ! | TCGTCAAAATAGTTCATTAA+TGG | + | chr2_2:61937609-61937628 | None:intergenic | 25.0% |
| !!! | ATTAATGAACTATTTTGACG+AGG | - | chr2_2:61937608-61937627 | Msa0262920:intron | 25.0% |
| !!! | AAGTTTGTTATTTCCCTATT+TGG | - | chr2_2:61937929-61937948 | Msa0262920:CDS | 25.0% |
| ! | ACACAAAATATGAAAAAGCA+TGG | + | chr2_2:61937968-61937987 | None:intergenic | 25.0% |
| ! | ATACTTTGGATAATTGAGAA+GGG | + | chr2_2:61938279-61938298 | None:intergenic | 25.0% |
| ! | AATACTTTGGATAATTGAGA+AGG | + | chr2_2:61938280-61938299 | None:intergenic | 25.0% |
| ! | TCACATTCCTTTAAATACTT+TGG | + | chr2_2:61938293-61938312 | None:intergenic | 25.0% |
| ! | TAATTGCATCATTAATCAAG+AGG | + | chr2_2:61938381-61938400 | None:intergenic | 25.0% |
| ! | ATGATGCAATTACAAAGTAA+CGG | - | chr2_2:61938389-61938408 | Msa0262920:CDS | 25.0% |
| ! | CTTAAGGAACATAAATTTAG+AGG | + | chr2_2:61938460-61938479 | None:intergenic | 25.0% |
| !!! | GTTCCTTAAGTTTTTGTTTT+TGG | - | chr2_2:61938470-61938489 | Msa0262920:CDS | 25.0% |
| ! | AAGCCAAAAACAAAAACTTA+AGG | + | chr2_2:61938476-61938495 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGGCTTTTAGAA+TGG | - | chr2_2:61938482-61938501 | Msa0262920:CDS | 25.0% |
| ! | AATAAAACAGAACTCATGAT+GGG | + | chr2_2:61938542-61938561 | None:intergenic | 25.0% |
| ! | AAATAAAACAGAACTCATGA+TGG | + | chr2_2:61938543-61938562 | None:intergenic | 25.0% |
| ! | ATAACACAACAAAACAATCT+GGG | + | chr2_2:61938735-61938754 | None:intergenic | 25.0% |
| ! | TATAACACAACAAAACAATC+TGG | + | chr2_2:61938736-61938755 | None:intergenic | 25.0% |
| ! | TCAAAAAATAGAGAATTCGA+AGG | - | chr2_2:61937039-61937058 | Msa0262920:intron | 25.0% |
| ! | TCAAAAGAAAAGCAATTTGA+AGG | - | chr2_2:61937249-61937268 | Msa0262920:intron | 25.0% |
| !! | AGAATAAGTTCAAAGTACTA+GGG | - | chr2_2:61937466-61937485 | Msa0262920:intron | 25.0% |
| ! | TTAAAAGACAAGCAATTTGA+AGG | - | chr2_2:61937501-61937520 | Msa0262920:intron | 25.0% |
| !! | AATTTATTAAGCTTTGACTC+TGG | + | chr2_2:61937540-61937559 | None:intergenic | 25.0% |
| ! | TCGTCAAAATAGTTCATTAA+TGG | + | chr2_2:61937609-61937628 | None:intergenic | 25.0% |
| !!! | ATTAATGAACTATTTTGACG+AGG | - | chr2_2:61937608-61937627 | Msa0262920:intron | 25.0% |
| !!! | AAGTTTGTTATTTCCCTATT+TGG | - | chr2_2:61937929-61937948 | Msa0262920:CDS | 25.0% |
| ! | ACACAAAATATGAAAAAGCA+TGG | + | chr2_2:61937968-61937987 | None:intergenic | 25.0% |
| ! | ATACTTTGGATAATTGAGAA+GGG | + | chr2_2:61938279-61938298 | None:intergenic | 25.0% |
| ! | AATACTTTGGATAATTGAGA+AGG | + | chr2_2:61938280-61938299 | None:intergenic | 25.0% |
| ! | TCACATTCCTTTAAATACTT+TGG | + | chr2_2:61938293-61938312 | None:intergenic | 25.0% |
| ! | TAATTGCATCATTAATCAAG+AGG | + | chr2_2:61938381-61938400 | None:intergenic | 25.0% |
| ! | ATGATGCAATTACAAAGTAA+CGG | - | chr2_2:61938389-61938408 | Msa0262920:CDS | 25.0% |
| ! | CTTAAGGAACATAAATTTAG+AGG | + | chr2_2:61938460-61938479 | None:intergenic | 25.0% |
| !!! | GTTCCTTAAGTTTTTGTTTT+TGG | - | chr2_2:61938470-61938489 | Msa0262920:CDS | 25.0% |
| ! | AAGCCAAAAACAAAAACTTA+AGG | + | chr2_2:61938476-61938495 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGGCTTTTAGAA+TGG | - | chr2_2:61938482-61938501 | Msa0262920:CDS | 25.0% |
| ! | AATAAAACAGAACTCATGAT+GGG | + | chr2_2:61938542-61938561 | None:intergenic | 25.0% |
| ! | AAATAAAACAGAACTCATGA+TGG | + | chr2_2:61938543-61938562 | None:intergenic | 25.0% |
| ! | ATAACACAACAAAACAATCT+GGG | + | chr2_2:61938735-61938754 | None:intergenic | 25.0% |
| ! | TATAACACAACAAAACAATC+TGG | + | chr2_2:61938736-61938755 | None:intergenic | 25.0% |
| TATAAAGAGAAGCAACTTGA+TGG | - | chr2_2:61936997-61937016 | Msa0262920:intron | 30.0% | |
| !!! | GTGTTTTGAAAGTCAAGTTA+AGG | - | chr2_2:61937092-61937111 | Msa0262920:intron | 30.0% |
| TGTAAAGAGAAGAAAATCGA+TGG | - | chr2_2:61937123-61937142 | Msa0262920:intron | 30.0% | |
| AAAGGAGTTTGAATCAAAAG+AGG | - | chr2_2:61937152-61937171 | Msa0262920:intron | 30.0% | |
| TCAAAAGAGGATGAATTTGA+AGG | - | chr2_2:61937165-61937184 | Msa0262920:intron | 30.0% | |
| !! | TTGATTTTAAGTACTCAACC+TGG | + | chr2_2:61937401-61937420 | None:intergenic | 30.0% |
| ! | GAGAATAAGTTCAAAGTACT+AGG | - | chr2_2:61937465-61937484 | Msa0262920:intron | 30.0% |
| ! | TAAATTTGATGGACAAGTGA+AGG | - | chr2_2:61937554-61937573 | Msa0262920:intron | 30.0% |
| ATCAGTGGATATATAGTCAT+CGG | + | chr2_2:61937868-61937887 | None:intergenic | 30.0% | |
| CAAACAACAGAATCCAAATA+GGG | + | chr2_2:61937945-61937964 | None:intergenic | 30.0% | |
| CACATGATTTCTTCTATTTC+AGG | - | chr2_2:61938226-61938245 | Msa0262920:CDS | 30.0% | |
| ! | TGATTTCTTCTATTTCAGGT+TGG | - | chr2_2:61938230-61938249 | Msa0262920:CDS | 30.0% |
| TTAGAATGGTTAATTCACTC+TGG | - | chr2_2:61938496-61938515 | Msa0262920:CDS | 30.0% | |
| ATATATTGGGGCCTTAATAT+AGG | - | chr2_2:61938643-61938662 | Msa0262920:CDS | 30.0% | |
| ATCTCAGTTCTCAATTCAAT+AGG | + | chr2_2:61938712-61938731 | None:intergenic | 30.0% | |
| TATAAAGAGAAGCAACTTGA+TGG | - | chr2_2:61936997-61937016 | Msa0262920:intron | 30.0% | |
| !!! | GTGTTTTGAAAGTCAAGTTA+AGG | - | chr2_2:61937092-61937111 | Msa0262920:intron | 30.0% |
| TGTAAAGAGAAGAAAATCGA+TGG | - | chr2_2:61937123-61937142 | Msa0262920:intron | 30.0% | |
| AAAGGAGTTTGAATCAAAAG+AGG | - | chr2_2:61937152-61937171 | Msa0262920:intron | 30.0% | |
| TCAAAAGAGGATGAATTTGA+AGG | - | chr2_2:61937165-61937184 | Msa0262920:intron | 30.0% | |
| !! | TTGATTTTAAGTACTCAACC+TGG | + | chr2_2:61937401-61937420 | None:intergenic | 30.0% |
| ! | GAGAATAAGTTCAAAGTACT+AGG | - | chr2_2:61937465-61937484 | Msa0262920:intron | 30.0% |
| ! | TAAATTTGATGGACAAGTGA+AGG | - | chr2_2:61937554-61937573 | Msa0262920:intron | 30.0% |
| ATCAGTGGATATATAGTCAT+CGG | + | chr2_2:61937868-61937887 | None:intergenic | 30.0% | |
| CAAACAACAGAATCCAAATA+GGG | + | chr2_2:61937945-61937964 | None:intergenic | 30.0% | |
| CACATGATTTCTTCTATTTC+AGG | - | chr2_2:61938226-61938245 | Msa0262920:CDS | 30.0% | |
| ! | TGATTTCTTCTATTTCAGGT+TGG | - | chr2_2:61938230-61938249 | Msa0262920:CDS | 30.0% |
| TTAGAATGGTTAATTCACTC+TGG | - | chr2_2:61938496-61938515 | Msa0262920:CDS | 30.0% | |
| ATATATTGGGGCCTTAATAT+AGG | - | chr2_2:61938643-61938662 | Msa0262920:CDS | 30.0% | |
| ATCTCAGTTCTCAATTCAAT+AGG | + | chr2_2:61938712-61938731 | None:intergenic | 30.0% | |
| !! | AGATTTTGAAGAGCAAGTGA+AGG | - | chr2_2:61936882-61936901 | Msa0262920:CDS | 35.0% |
| GCAATTGAAAGGACAAGTTA+AGG | - | chr2_2:61936966-61936985 | Msa0262920:intron | 35.0% | |
| TTGATTCAAACTCCTTTGCT+CGG | + | chr2_2:61937149-61937168 | None:intergenic | 35.0% | |
| TCAAAAGAGGAGGAGTTTAA+AGG | - | chr2_2:61937291-61937310 | Msa0262920:intron | 35.0% | |
| GAAGGAGTTTGAATCAAAGA+AGG | - | chr2_2:61937320-61937339 | Msa0262920:intron | 35.0% | |
| TCAAAGAAGGAGGAATTCAA+AGG | - | chr2_2:61937333-61937352 | Msa0262920:intron | 35.0% | |
| AGAAGCAATTTGAAGAACAG+CGG | - | chr2_2:61937424-61937443 | Msa0262920:intron | 35.0% | |
| TATTGTTTCACTGTCAACTC+AGG | + | chr2_2:61937582-61937601 | None:intergenic | 35.0% | |
| ! | TTTTGACGAGGAAACAGAAT+CGG | - | chr2_2:61937620-61937639 | Msa0262920:intron | 35.0% |
| TAACCTGATCTACACATATG+AGG | - | chr2_2:61937717-61937736 | Msa0262920:intron | 35.0% | |
| AACCTGATCTACACATATGA+GGG | - | chr2_2:61937718-61937737 | Msa0262920:intron | 35.0% | |
| ! | CCAAGTTCACACAGATATTT+TGG | + | chr2_2:61937766-61937785 | None:intergenic | 35.0% |
| CCAAAATATCTGTGTGAACT+TGG | - | chr2_2:61937763-61937782 | Msa0262920:intron | 35.0% | |
| TCCACTGATGAAATGATACA+TGG | - | chr2_2:61937879-61937898 | Msa0262920:intron | 35.0% | |
| ACCATGTATCATTTCATCAG+TGG | + | chr2_2:61937883-61937902 | None:intergenic | 35.0% | |
| GCAAACAACAGAATCCAAAT+AGG | + | chr2_2:61937946-61937965 | None:intergenic | 35.0% | |
| TTGAATGTAATCACACGTGT+CGG | - | chr2_2:61938078-61938097 | Msa0262920:CDS | 35.0% | |
| GAGGTTATGACTCATTTCAT+TGG | - | chr2_2:61938163-61938182 | Msa0262920:CDS | 35.0% | |
| ! | TTCATTGGTACTCATTTTGC+TGG | - | chr2_2:61938178-61938197 | Msa0262920:CDS | 35.0% |
| ! | TCATTGGTACTCATTTTGCT+GGG | - | chr2_2:61938179-61938198 | Msa0262920:CDS | 35.0% |
| TCAAGAGGTCAAAATGAACA+CGG | + | chr2_2:61938366-61938385 | None:intergenic | 35.0% | |
| ! | AAGCTTGCTCACCTATATTA+AGG | + | chr2_2:61938657-61938676 | None:intergenic | 35.0% |
| !! | AGATTTTGAAGAGCAAGTGA+AGG | - | chr2_2:61936882-61936901 | Msa0262920:CDS | 35.0% |
| GCAATTGAAAGGACAAGTTA+AGG | - | chr2_2:61936966-61936985 | Msa0262920:intron | 35.0% | |
| TTGATTCAAACTCCTTTGCT+CGG | + | chr2_2:61937149-61937168 | None:intergenic | 35.0% | |
| TCAAAAGAGGAGGAGTTTAA+AGG | - | chr2_2:61937291-61937310 | Msa0262920:intron | 35.0% | |
| GAAGGAGTTTGAATCAAAGA+AGG | - | chr2_2:61937320-61937339 | Msa0262920:intron | 35.0% | |
| TCAAAGAAGGAGGAATTCAA+AGG | - | chr2_2:61937333-61937352 | Msa0262920:intron | 35.0% | |
| AGAAGCAATTTGAAGAACAG+CGG | - | chr2_2:61937424-61937443 | Msa0262920:intron | 35.0% | |
| TATTGTTTCACTGTCAACTC+AGG | + | chr2_2:61937582-61937601 | None:intergenic | 35.0% | |
| ! | TTTTGACGAGGAAACAGAAT+CGG | - | chr2_2:61937620-61937639 | Msa0262920:intron | 35.0% |
| TAACCTGATCTACACATATG+AGG | - | chr2_2:61937717-61937736 | Msa0262920:intron | 35.0% | |
| AACCTGATCTACACATATGA+GGG | - | chr2_2:61937718-61937737 | Msa0262920:intron | 35.0% | |
| ! | CCAAGTTCACACAGATATTT+TGG | + | chr2_2:61937766-61937785 | None:intergenic | 35.0% |
| CCAAAATATCTGTGTGAACT+TGG | - | chr2_2:61937763-61937782 | Msa0262920:intron | 35.0% | |
| TCCACTGATGAAATGATACA+TGG | - | chr2_2:61937879-61937898 | Msa0262920:intron | 35.0% | |
| ACCATGTATCATTTCATCAG+TGG | + | chr2_2:61937883-61937902 | None:intergenic | 35.0% | |
| GCAAACAACAGAATCCAAAT+AGG | + | chr2_2:61937946-61937965 | None:intergenic | 35.0% | |
| TTGAATGTAATCACACGTGT+CGG | - | chr2_2:61938078-61938097 | Msa0262920:CDS | 35.0% | |
| GAGGTTATGACTCATTTCAT+TGG | - | chr2_2:61938163-61938182 | Msa0262920:CDS | 35.0% | |
| ! | TTCATTGGTACTCATTTTGC+TGG | - | chr2_2:61938178-61938197 | Msa0262920:CDS | 35.0% |
| ! | TCATTGGTACTCATTTTGCT+GGG | - | chr2_2:61938179-61938198 | Msa0262920:CDS | 35.0% |
| TCAAGAGGTCAAAATGAACA+CGG | + | chr2_2:61938366-61938385 | None:intergenic | 35.0% | |
| ! | AAGCTTGCTCACCTATATTA+AGG | + | chr2_2:61938657-61938676 | None:intergenic | 35.0% |
| TCAATAGAGAAGCAACGTGA+AGG | - | chr2_2:61936829-61936848 | Msa0262920:CDS | 40.0% | |
| !! | GAAGAGTTTTGATAGCCAAG+TGG | - | chr2_2:61936921-61936940 | Msa0262920:intron | 40.0% |
| AGGAGTTCAAATCACAACAG+AGG | - | chr2_2:61936944-61936963 | Msa0262920:intron | 40.0% | |
| TCACAACAGAGGCAATTGAA+AGG | - | chr2_2:61936955-61936974 | Msa0262920:intron | 40.0% | |
| !! | AAAAGAAGCATTTCGAGAGC+AGG | - | chr2_2:61937211-61937230 | Msa0262920:intron | 40.0% |
| GCAATTTGAAGGACAAGTGA+AGG | - | chr2_2:61937260-61937279 | Msa0262920:intron | 40.0% | |
| ! | TAAACTCCTCCTCTTTTGAC+TGG | + | chr2_2:61937290-61937309 | None:intergenic | 40.0% |
| GGAGTTTAAAGGTCAAGTGA+AGG | - | chr2_2:61937302-61937321 | Msa0262920:intron | 40.0% | |
| GGAGTTTGAATCAAAGAAGG+AGG | - | chr2_2:61937323-61937342 | Msa0262920:intron | 40.0% | |
| AAAGCAGCAATTTGAAAGCC+AGG | - | chr2_2:61937380-61937399 | Msa0262920:intron | 40.0% | |
| AGAACAGCGGAAAGAATTTG+AGG | - | chr2_2:61937437-61937456 | Msa0262920:intron | 40.0% | |
| GCAATTTGAAGGACAAGTCA+AGG | - | chr2_2:61937512-61937531 | Msa0262920:intron | 40.0% | |
| TTTGACGAGGAAACAGAATC+GGG | - | chr2_2:61937621-61937640 | Msa0262920:intron | 40.0% | |
| ACACATATGAGGGAGCTTAA+AGG | - | chr2_2:61937728-61937747 | Msa0262920:intron | 40.0% | |
| ATATGAGGGAGCTTAAAGGT+AGG | - | chr2_2:61937732-61937751 | Msa0262920:intron | 40.0% | |
| AATGATACATGGTCTCTGTC+TGG | - | chr2_2:61937890-61937909 | Msa0262920:intron | 40.0% | |
| AAGAGGTCAAAATGAACACG+GGG | + | chr2_2:61938364-61938383 | None:intergenic | 40.0% | |
| CAAGAGGTCAAAATGAACAC+GGG | + | chr2_2:61938365-61938384 | None:intergenic | 40.0% | |
| ATATAGGTGAGCAAGCTTCA+AGG | - | chr2_2:61938659-61938678 | Msa0262920:CDS | 40.0% | |
| TATAGGTGAGCAAGCTTCAA+GGG | - | chr2_2:61938660-61938679 | Msa0262920:CDS | 40.0% | |
| TCAATAGAGAAGCAACGTGA+AGG | - | chr2_2:61936829-61936848 | Msa0262920:CDS | 40.0% | |
| !! | GAAGAGTTTTGATAGCCAAG+TGG | - | chr2_2:61936921-61936940 | Msa0262920:intron | 40.0% |
| AGGAGTTCAAATCACAACAG+AGG | - | chr2_2:61936944-61936963 | Msa0262920:intron | 40.0% | |
| TCACAACAGAGGCAATTGAA+AGG | - | chr2_2:61936955-61936974 | Msa0262920:intron | 40.0% | |
| !! | AAAAGAAGCATTTCGAGAGC+AGG | - | chr2_2:61937211-61937230 | Msa0262920:intron | 40.0% |
| GCAATTTGAAGGACAAGTGA+AGG | - | chr2_2:61937260-61937279 | Msa0262920:intron | 40.0% | |
| ! | TAAACTCCTCCTCTTTTGAC+TGG | + | chr2_2:61937290-61937309 | None:intergenic | 40.0% |
| GGAGTTTAAAGGTCAAGTGA+AGG | - | chr2_2:61937302-61937321 | Msa0262920:intron | 40.0% | |
| GGAGTTTGAATCAAAGAAGG+AGG | - | chr2_2:61937323-61937342 | Msa0262920:intron | 40.0% | |
| AAAGCAGCAATTTGAAAGCC+AGG | - | chr2_2:61937380-61937399 | Msa0262920:intron | 40.0% | |
| AGAACAGCGGAAAGAATTTG+AGG | - | chr2_2:61937437-61937456 | Msa0262920:intron | 40.0% | |
| GCAATTTGAAGGACAAGTCA+AGG | - | chr2_2:61937512-61937531 | Msa0262920:intron | 40.0% | |
| TTTGACGAGGAAACAGAATC+GGG | - | chr2_2:61937621-61937640 | Msa0262920:intron | 40.0% | |
| ACACATATGAGGGAGCTTAA+AGG | - | chr2_2:61937728-61937747 | Msa0262920:intron | 40.0% | |
| ATATGAGGGAGCTTAAAGGT+AGG | - | chr2_2:61937732-61937751 | Msa0262920:intron | 40.0% | |
| AATGATACATGGTCTCTGTC+TGG | - | chr2_2:61937890-61937909 | Msa0262920:intron | 40.0% | |
| AAGAGGTCAAAATGAACACG+GGG | + | chr2_2:61938364-61938383 | None:intergenic | 40.0% | |
| CAAGAGGTCAAAATGAACAC+GGG | + | chr2_2:61938365-61938384 | None:intergenic | 40.0% | |
| ATATAGGTGAGCAAGCTTCA+AGG | - | chr2_2:61938659-61938678 | Msa0262920:CDS | 40.0% | |
| TATAGGTGAGCAAGCTTCAA+GGG | - | chr2_2:61938660-61938679 | Msa0262920:CDS | 40.0% | |
| TTGATTCATGCTCCTTCACC+CGG | + | chr2_2:61936855-61936874 | None:intergenic | 45.0% | |
| !! | GAGTTTTGATAGCCAAGTGG+AGG | - | chr2_2:61936924-61936943 | Msa0262920:intron | 45.0% |
| GTGATTTGAACTCCTCCACT+TGG | + | chr2_2:61936939-61936958 | None:intergenic | 45.0% | |
| AGAATTCGAAGGCCATGTGA+AGG | - | chr2_2:61937050-61937069 | Msa0262920:intron | 45.0% | |
| TAGATTCCAGCTCCTTCACA+TGG | + | chr2_2:61937065-61937084 | None:intergenic | 45.0% | |
| TGAATTTGAAGGCCGAGTGA+AGG | - | chr2_2:61937176-61937195 | Msa0262920:intron | 45.0% | |
| CTGATTCCAACTCCTTCACT+CGG | + | chr2_2:61937191-61937210 | None:intergenic | 45.0% | |
| GAAGGAGTTCCAGTCAAAAG+AGG | - | chr2_2:61937278-61937297 | Msa0262920:intron | 45.0% | |
| GAAGGAGGAATTCAAAGGTC+AGG | - | chr2_2:61937338-61937357 | Msa0262920:intron | 45.0% | |
| CTCCCTCATATGTGTAGATC+AGG | + | chr2_2:61937723-61937742 | None:intergenic | 45.0% | |
| TCTGATGCTTGTGTCTGTGT+TGG | + | chr2_2:61938009-61938028 | None:intergenic | 45.0% | |
| GTCCAGTGTTCAACATGTGT+CGG | + | chr2_2:61938113-61938132 | None:intergenic | 45.0% | |
| GCCTTTGATCACAAGTGTCA+GGG | - | chr2_2:61938135-61938154 | Msa0262920:CDS | 45.0% | |
| ! | TCATTTTGCTGGGACTGTTG+TGG | - | chr2_2:61938189-61938208 | Msa0262920:CDS | 45.0% |
| CAAGATCAATCAGTCACTGC+AGG | + | chr2_2:61938568-61938587 | None:intergenic | 45.0% | |
| TTGATTCATGCTCCTTCACC+CGG | + | chr2_2:61936855-61936874 | None:intergenic | 45.0% | |
| !! | GAGTTTTGATAGCCAAGTGG+AGG | - | chr2_2:61936924-61936943 | Msa0262920:intron | 45.0% |
| GTGATTTGAACTCCTCCACT+TGG | + | chr2_2:61936939-61936958 | None:intergenic | 45.0% | |
| AGAATTCGAAGGCCATGTGA+AGG | - | chr2_2:61937050-61937069 | Msa0262920:intron | 45.0% | |
| TAGATTCCAGCTCCTTCACA+TGG | + | chr2_2:61937065-61937084 | None:intergenic | 45.0% | |
| TGAATTTGAAGGCCGAGTGA+AGG | - | chr2_2:61937176-61937195 | Msa0262920:intron | 45.0% | |
| CTGATTCCAACTCCTTCACT+CGG | + | chr2_2:61937191-61937210 | None:intergenic | 45.0% | |
| GAAGGAGTTCCAGTCAAAAG+AGG | - | chr2_2:61937278-61937297 | Msa0262920:intron | 45.0% | |
| GAAGGAGGAATTCAAAGGTC+AGG | - | chr2_2:61937338-61937357 | Msa0262920:intron | 45.0% | |
| CTCCCTCATATGTGTAGATC+AGG | + | chr2_2:61937723-61937742 | None:intergenic | 45.0% | |
| TCTGATGCTTGTGTCTGTGT+TGG | + | chr2_2:61938009-61938028 | None:intergenic | 45.0% | |
| GTCCAGTGTTCAACATGTGT+CGG | + | chr2_2:61938113-61938132 | None:intergenic | 45.0% | |
| GCCTTTGATCACAAGTGTCA+GGG | - | chr2_2:61938135-61938154 | Msa0262920:CDS | 45.0% | |
| ! | TCATTTTGCTGGGACTGTTG+TGG | - | chr2_2:61938189-61938208 | Msa0262920:CDS | 45.0% |
| CAAGATCAATCAGTCACTGC+AGG | + | chr2_2:61938568-61938587 | None:intergenic | 45.0% | |
| TAGAGAAGCAACGTGAAGGC+CGG | - | chr2_2:61936833-61936852 | Msa0262920:CDS | 50.0% | |
| TGAAGAGCAAGTGAAGGAGC+TGG | - | chr2_2:61936888-61936907 | Msa0262920:intron | 50.0% | |
| ! | GAAGCAACTTGATGGACGAG+TGG | - | chr2_2:61937005-61937024 | Msa0262920:intron | 50.0% |
| GAAAATCGATGGCCGAGCAA+AGG | - | chr2_2:61937134-61937153 | Msa0262920:intron | 50.0% | |
| GGAGTTCCAGTCAAAAGAGG+AGG | - | chr2_2:61937281-61937300 | Msa0262920:intron | 50.0% | |
| CACCGACACATGTTGAACAC+TGG | - | chr2_2:61938108-61938127 | Msa0262920:CDS | 50.0% | |
| CGCCTTTGATCACAAGTGTC+AGG | - | chr2_2:61938134-61938153 | Msa0262920:CDS | 50.0% | |
| GCCCTGACACTTGTGATCAA+AGG | + | chr2_2:61938139-61938158 | None:intergenic | 50.0% | |
| CACAAGTGTCAGGGCTATAG+AGG | - | chr2_2:61938144-61938163 | Msa0262920:CDS | 50.0% | |
| TAGAGAAGCAACGTGAAGGC+CGG | - | chr2_2:61936833-61936852 | Msa0262920:CDS | 50.0% | |
| TGAAGAGCAAGTGAAGGAGC+TGG | - | chr2_2:61936888-61936907 | Msa0262920:intron | 50.0% | |
| ! | GAAGCAACTTGATGGACGAG+TGG | - | chr2_2:61937005-61937024 | Msa0262920:intron | 50.0% |
| GAAAATCGATGGCCGAGCAA+AGG | - | chr2_2:61937134-61937153 | Msa0262920:intron | 50.0% | |
| GGAGTTCCAGTCAAAAGAGG+AGG | - | chr2_2:61937281-61937300 | Msa0262920:intron | 50.0% | |
| CACCGACACATGTTGAACAC+TGG | - | chr2_2:61938108-61938127 | Msa0262920:CDS | 50.0% | |
| CGCCTTTGATCACAAGTGTC+AGG | - | chr2_2:61938134-61938153 | Msa0262920:CDS | 50.0% | |
| GCCCTGACACTTGTGATCAA+AGG | + | chr2_2:61938139-61938158 | None:intergenic | 50.0% | |
| CACAAGTGTCAGGGCTATAG+AGG | - | chr2_2:61938144-61938163 | Msa0262920:CDS | 50.0% | |
| AGAGAAGCAACGTGAAGGCC+GGG | - | chr2_2:61936834-61936853 | Msa0262920:CDS | 55.0% | |
| TGAAGGCCGAGTGAAGGAGT+TGG | - | chr2_2:61937182-61937201 | Msa0262920:intron | 55.0% | |
| GCATTTCGAGAGCAGGCTGA+AGG | - | chr2_2:61937218-61937237 | Msa0262920:intron | 55.0% | |
| TGAGTTTGAGCCACTGCAGC+TGG | - | chr2_2:61938334-61938353 | Msa0262920:CDS | 55.0% | |
| AGAGAAGCAACGTGAAGGCC+GGG | - | chr2_2:61936834-61936853 | Msa0262920:CDS | 55.0% | |
| TGAAGGCCGAGTGAAGGAGT+TGG | - | chr2_2:61937182-61937201 | Msa0262920:intron | 55.0% | |
| GCATTTCGAGAGCAGGCTGA+AGG | - | chr2_2:61937218-61937237 | Msa0262920:intron | 55.0% | |
| TGAGTTTGAGCCACTGCAGC+TGG | - | chr2_2:61938334-61938353 | Msa0262920:CDS | 55.0% | |
| CGAAGGCCATGTGAAGGAGC+TGG | - | chr2_2:61937056-61937075 | Msa0262920:intron | 60.0% | |
| ACGGGGATTTCCAGCTGCAG+TGG | + | chr2_2:61938347-61938366 | None:intergenic | 60.0% | |
| CGAAGGCCATGTGAAGGAGC+TGG | - | chr2_2:61937056-61937075 | Msa0262920:intron | 60.0% | |
| ACGGGGATTTCCAGCTGCAG+TGG | + | chr2_2:61938347-61938366 | None:intergenic | 60.0% | |
| GCAACGTGAAGGCCGGGTGA+AGG | - | chr2_2:61936840-61936859 | Msa0262920:CDS | 65.0% | |
| GCAACGTGAAGGCCGGGTGA+AGG | - | chr2_2:61936840-61936859 | Msa0262920:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 61936814 | 61938756 | 61936814 | ID=Msa0262920;Name=Msa0262920 |
| chr2_2 | mRNA | 61936814 | 61938756 | 61936814 | ID=Msa0262920-mRNA-1;Parent=Msa0262920;Name=Msa0262920-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.5|1|0.5|2|0|306 |
| chr2_2 | exon | 61937928 | 61938756 | 61937928 | ID=Msa0262920-mRNA-1:exon:19077;Parent=Msa0262920-mRNA-1 |
| chr2_2 | exon | 61936814 | 61936905 | 61936814 | ID=Msa0262920-mRNA-1:exon:19076;Parent=Msa0262920-mRNA-1 |
| chr2_2 | CDS | 61937928 | 61938756 | 61937928 | ID=Msa0262920-mRNA-1:cds;Parent=Msa0262920-mRNA-1 |
| chr2_2 | CDS | 61936814 | 61936905 | 61936814 | ID=Msa0262920-mRNA-1:cds;Parent=Msa0262920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
