AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0263530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263530 MtrunA17_Chr2g0326581 97.168 565 15 1 1 565 1 564 0.0 1111
Msa0263530 MtrunA17_Chr4g0029181 72.535 568 133 5 16 565 21 583 0.0 791
Msa0263530 MtrunA17_Chr2g0331681 34.305 446 290 2 84 527 67 511 4.89e-95 300
Msa0263530 MtrunA17_Chr3g0124851 36.239 436 256 13 81 501 35 463 5.76e-75 247
Msa0263530 MtrunA17_Chr3g0124851 42.735 117 61 4 74 184 372 488 2.04e-17 85.5
Msa0263530 MtrunA17_Chr2g0326131 34.562 217 141 1 311 527 10 225 9.15e-44 155
Msa0263530 MtrunA17_Chr1g0200731 29.971 347 210 11 72 401 87 417 9.09e-25 107
Msa0263530 MtrunA17_Chr7g0271721 41.667 168 82 6 80 232 25 191 8.94e-24 103
Msa0263530 MtrunA17_Chr7g0271721 34.807 181 106 6 81 258 144 315 4.70e-18 85.9
Msa0263530 MtrunA17_Chr7g0271721 34.054 185 105 6 320 502 56 225 9.90e-17 82.0
Msa0263530 MtrunA17_Chr7g0271721 35.345 116 70 3 418 531 25 137 1.44e-14 75.5
Msa0263530 MtrunA17_Chr1g0194961 37.297 185 103 5 320 502 61 234 4.30e-23 101
Msa0263530 MtrunA17_Chr1g0194961 35.119 168 89 4 84 232 34 200 1.42e-20 93.6
Msa0263530 MtrunA17_Chr1g0194961 35.185 108 65 3 426 531 38 142 1.99e-13 72.0
Msa0263530 MtrunA17_Chr5g0438731 41.600 125 65 4 56 175 167 288 1.16e-18 89.0
Msa0263530 MtrunA17_Chr5g0438731 50.602 83 38 2 81 161 61 142 2.54e-16 81.6
Msa0263530 MtrunA17_Chr5g0438731 27.670 206 131 6 323 520 96 291 6.78e-13 70.9
Msa0263530 MtrunA17_Chr2g0287471 45.361 97 50 3 81 175 30 125 9.02e-14 72.8
Msa0263530 MtrunA17_Chr4g0041801 30.909 110 59 2 84 176 146 255 8.72e-12 67.4
Msa0263530 MtrunA17_Chr3g0125821 33.654 104 66 3 80 181 69 171 9.06e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263530 AT5G60640.1 70.077 518 143 3 59 565 81 597 0.0 756
Msa0263530 AT3G54960.1 61.594 552 190 7 29 565 35 579 0.0 687
Msa0263530 AT5G60640.2 71.175 451 128 1 59 507 81 531 0.0 684
Msa0263530 AT3G54960.2 61.099 473 168 4 29 486 35 506 0.0 601
Msa0263530 AT5G60640.3 56.923 520 144 8 59 565 81 533 0.0 563
Msa0263530 AT3G16110.1 34.633 436 281 3 78 510 74 508 1.10e-92 294
Msa0263530 AT1G52260.1 33.716 436 285 3 78 510 76 510 5.05e-91 290
Msa0263530 AT1G21750.2 38.972 467 251 18 81 526 32 485 1.33e-85 274
Msa0263530 AT1G21750.1 38.961 462 251 17 81 524 32 480 9.33e-85 273
Msa0263530 AT1G77510.1 36.566 495 273 19 81 553 31 506 7.06e-79 257
Msa0263530 AT1G77510.1 42.478 113 63 2 73 183 367 479 1.06e-16 83.6
Msa0263530 AT2G47470.2 31.169 231 117 8 84 284 28 246 3.51e-21 94.0
Msa0263530 AT2G47470.2 34.054 185 109 5 320 502 55 228 5.87e-21 93.2
Msa0263530 AT2G47470.2 33.333 111 67 3 432 540 37 142 4.21e-13 70.1
Msa0263530 AT2G47470.3 34.054 185 109 5 320 502 55 228 9.25e-21 94.0
Msa0263530 AT2G47470.3 31.169 231 117 8 84 284 28 246 1.35e-20 93.6
Msa0263530 AT2G47470.3 34.579 107 63 3 436 540 41 142 5.48e-13 70.9
Msa0263530 AT2G47470.4 34.054 185 109 5 320 502 55 228 1.09e-20 94.0
Msa0263530 AT2G47470.4 31.169 231 117 8 84 284 28 246 1.52e-20 93.6
Msa0263530 AT2G47470.4 34.579 107 63 3 436 540 41 142 4.42e-13 71.2
Msa0263530 AT2G47470.1 34.239 184 108 5 321 502 56 228 1.21e-20 94.4
Msa0263530 AT2G47470.1 31.169 231 117 8 84 284 28 246 1.78e-20 93.6
Msa0263530 AT2G47470.1 35.714 98 59 2 436 531 41 136 4.71e-13 71.2
Msa0263530 AT1G35620.1 28.829 222 136 7 81 291 34 244 9.58e-19 89.4
Msa0263530 AT1G04980.1 29.018 224 133 9 82 283 170 389 2.10e-17 85.5
Msa0263530 AT1G04980.1 44.330 97 51 3 81 175 34 129 1.38e-16 82.8
Msa0263530 AT1G04980.1 27.488 211 134 5 321 520 66 268 8.44e-15 77.4
Msa0263530 AT2G32920.1 46.465 99 45 4 82 175 165 260 3.24e-17 84.7
Msa0263530 AT2G32920.1 42.308 104 57 3 81 182 32 134 1.59e-16 82.8
Msa0263530 AT2G32920.1 27.670 206 133 5 323 520 66 263 1.34e-13 73.6
Msa0263530 AT4G27080.1 32.283 127 68 3 79 188 141 266 4.40e-13 72.0
Msa0263530 AT4G27080.2 32.283 127 68 3 79 188 193 318 5.41e-13 72.0

Find 138 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATGAGTATTTAGAATTT+TGG 0.029623 2_2:-62970880 Msa0263530:three_prime_UTR
ATCAAATAGCTTACACTTTC+AGG 0.073604 2_2:+62971954 None:intergenic
TAGGAGTTGAGGCTGGTTTC+TGG 0.153170 2_2:+62971144 None:intergenic
AACTAAATACCCGAAATAAA+TGG 0.200568 2_2:+62970832 None:intergenic
GAAATTGCTCCCAGTATTTC+AGG 0.203282 2_2:-62972860 Msa0263530:CDS
GAAGAAAAGCTCAACCATTT+TGG 0.206003 2_2:-62973240 Msa0263530:intron
ACATCAGAGCTCTCTGATTT+AGG 0.211013 2_2:+62971125 None:intergenic
GTCGCAGCGGCGGCGTATTC+TGG 0.211215 2_2:+62974537 None:intergenic
TTCTGAGACCAAAGTTGTTT+TGG 0.212145 2_2:-62974177 Msa0263530:CDS
TGCTCAGAAATTTGATGTTC+AGG 0.255407 2_2:-62974454 Msa0263530:CDS
TAGCTTACACTTTCAGGAAT+TGG 0.267348 2_2:+62971960 None:intergenic
ATAATTACCTGTTTCTTGAT+TGG 0.283200 2_2:+62973023 None:intergenic
TTGAAAAGCTTTGCAACTTC+AGG 0.285270 2_2:+62973312 None:intergenic
TTTGATGCTTCCTGAAATAC+TGG 0.295344 2_2:+62972850 None:intergenic
GTTGCTACTTTGGTTCTCTT+TGG 0.295651 2_2:+62971085 None:intergenic
TATACATAACATTACTTCAT+TGG 0.319759 2_2:-62974222 Msa0263530:CDS
GTGGTGGTTTCACCAGCTTC+TGG 0.328568 2_2:+62974771 None:intergenic
AGAAATTAAACAAACCAAAA+TGG 0.339530 2_2:+62973226 None:intergenic
CTGCTTGAGGAACTTGTAAA+AGG 0.346354 2_2:+62971190 None:intergenic
AGCTTACACTTTCAGGAATT+GGG 0.357347 2_2:+62971961 None:intergenic
GCTGGTTTCTGGAGCTTGAA+TGG 0.364344 2_2:+62971155 None:intergenic
ACTAAATACCCGAAATAAAT+GGG 0.365943 2_2:+62970833 None:intergenic
GGTGACTATTGACAGAATTA+AGG 0.380026 2_2:-62972173 Msa0263530:intron
CTGGTTTCTGGAGCTTGAAT+GGG 0.380359 2_2:+62971156 None:intergenic
CTCCTCCAACAAGATTCCTT+TGG 0.388801 2_2:-62973090 Msa0263530:CDS
AAGGATCAACGCAGGGCGTT+TGG 0.389545 2_2:+62973275 None:intergenic
CTCATTGTGAATGAAATTTG+CGG 0.402021 2_2:+62974900 None:intergenic
TGAAAATCCAATCAAGAAAC+AGG 0.402093 2_2:-62973030 Msa0263530:intron
AAGAGGTAAAGGAGGGGAAA+AGG 0.409703 2_2:-62970936 Msa0263530:three_prime_UTR
TGACATCGCTGTTGCTACTT+TGG 0.410750 2_2:+62971075 None:intergenic
TTTGCAAGCTTGTTGTATAT+CGG 0.417814 2_2:+62971649 None:intergenic
AGTTTCTGAATCTTCGTAAC+CGG 0.422776 2_2:+62974695 None:intergenic
CGCCGCTGCGACGGAATTGA+AGG 0.425076 2_2:-62974526 Msa0263530:CDS
ATTTGGGTTTACCTTTGCCC+TGG 0.431662 2_2:+62971564 None:intergenic
ATACCGAAGTAATCTGAAAC+AGG 0.440539 2_2:+62972392 None:intergenic
GTGTGGCCATTGCCAACATT+TGG 0.443950 2_2:-62971674 Msa0263530:CDS
TCAGATTACTTCGGTATTAG+TGG 0.447352 2_2:-62972386 Msa0263530:CDS
TGTTACCAAAGGAATCTTGT+TGG 0.449876 2_2:+62973085 None:intergenic
CTTGGGGAGAGAAGAATTAG+TGG 0.450627 2_2:+62970966 None:intergenic
GAGAAAACCCAAAACAACTT+TGG 0.451359 2_2:+62974169 None:intergenic
CAACTTCAGGATCCACAGTC+TGG 0.454592 2_2:+62973325 None:intergenic
GGAAGAAAATTTGTGTTTGA+AGG 0.454888 2_2:-62972199 Msa0263530:CDS
GCAGCTAGCTCCTCACTCTC+AGG 0.456501 2_2:+62973381 None:intergenic
TCAATGAAGAAAAGAATAGT+AGG 0.456548 2_2:+62974426 None:intergenic
CGGAATCATCGCCGTGGTGG+TGG 0.460227 2_2:+62974742 None:intergenic
TGAAGGAGGAGAAGAAGAGA+AGG 0.463950 2_2:+62974850 None:intergenic
GCTCAGAAATTTGATGTTCA+GGG 0.464833 2_2:-62974453 Msa0263530:CDS
AGAGAAGGGTAGTGAGGGAA+AGG 0.466754 2_2:+62974865 None:intergenic
GGAAGCATCAAAGTCTTTCA+AGG 0.466842 2_2:-62972839 Msa0263530:CDS
GTGGTGGTGGTGTGTGGTGG+TGG 0.471773 2_2:+62974755 None:intergenic
AGAAGAAGAGAAGGGTAGTG+AGG 0.473537 2_2:+62974859 None:intergenic
TGTATATCGGTTCCAAATGT+TGG 0.475373 2_2:+62971662 None:intergenic
ATGTTCACTTTGCAGTCTGA+TGG 0.480322 2_2:-62971438 Msa0263530:intron
AAAATTTGTGTTTGAAGGAG+AGG 0.487863 2_2:-62972194 Msa0263530:CDS
AGGTAAAGGAGGGGAAAAGG+TGG 0.487891 2_2:-62970933 Msa0263530:three_prime_UTR
ACTCTTCTCTTCTTCCCAGC+AGG 0.489317 2_2:-62971408 Msa0263530:CDS
TTTGGGTTTACCTTTGCCCT+GGG 0.490545 2_2:+62971565 None:intergenic
AGCATAGATTATTATTTGCA+AGG 0.496484 2_2:+62970802 None:intergenic
CTCTCTTGTAATAGCCAAGA+TGG 0.503883 2_2:-62971608 Msa0263530:CDS
CAAGCCTATAAAAGAGGTAA+AGG 0.505464 2_2:-62970947 Msa0263530:three_prime_UTR
TTTCTTCCTCTTTCTTGACA+AGG 0.508368 2_2:+62973256 None:intergenic
GAAGAAGAGAAGGGTAGTGA+GGG 0.508802 2_2:+62974860 None:intergenic
GTGTGACTGTGATGTGAGAA+TGG 0.509620 2_2:+62974972 None:intergenic
TCTGATTTAGGAGTTGAGGC+TGG 0.514207 2_2:+62971137 None:intergenic
CAGATTACTTCGGTATTAGT+GGG 0.514292 2_2:-62972385 Msa0263530:CDS
GAACACAAAATGAGCATCCC+AGG 0.515907 2_2:-62971582 Msa0263530:CDS
ATCAAAGTCTTTCAAGGGAA+AGG 0.517288 2_2:-62972833 Msa0263530:intron
GGTGATGTGAAAATAGTTGT+TGG 0.517934 2_2:-62971855 Msa0263530:CDS
ACCACCACACACCACCACCA+CGG 0.523167 2_2:-62974753 Msa0263530:CDS
GTCTTCTTCGAGATCGGCGT+CGG 0.526121 2_2:+62974722 None:intergenic
AGAATTCGACTAAAACGAAT+CGG 0.526308 2_2:+62974595 None:intergenic
TCTCCCCAAGCCTATAAAAG+AGG 0.526504 2_2:-62970953 Msa0263530:three_prime_UTR
CTTCAATTCCGTCGCAGCGG+CGG 0.533371 2_2:+62974527 None:intergenic
TTAACTCGGCGACAGAATGA+TGG 0.534871 2_2:-62971876 Msa0263530:intron
ACATGGATTAAGAAGAAGAC+TGG 0.536124 2_2:-62974251 Msa0263530:CDS
AATATCAGATATATGCTCCT+TGG 0.540524 2_2:-62971696 Msa0263530:intron
ATCAGAGAGCTCTGATGTCA+AGG 0.545354 2_2:-62971120 Msa0263530:CDS
GCATACACCGGAAACGATGA+TGG 0.546485 2_2:-62972220 Msa0263530:CDS
GCAGTTGATCTTTGTGCTTG+TGG 0.546998 2_2:-62972441 Msa0263530:intron
TACCAAAGGAATCTTGTTGG+AGG 0.552032 2_2:+62973088 None:intergenic
GAAACTGATAACGAAGATGT+TGG 0.553749 2_2:-62972419 Msa0263530:CDS
GAAGGAGGAGAAGAAGAGAA+GGG 0.554511 2_2:+62974851 None:intergenic
GCCTATAAAAGAGGTAAAGG+AGG 0.558178 2_2:-62970944 Msa0263530:three_prime_UTR
AGCAACTTCATTATCTTCAG+TGG 0.558524 2_2:+62974473 None:intergenic
GCTGGGAAGAAGAGAAGAGT+GGG 0.561355 2_2:+62971411 None:intergenic
AATTGTCTTGGATGAGTCAA+AGG 0.563831 2_2:-62971817 Msa0263530:CDS
GCCGTGGTGGTGGTGTGTGG+TGG 0.565946 2_2:+62974752 None:intergenic
TTCCTCGACGAACCAGAAGC+TGG 0.565959 2_2:-62974783 Msa0263530:CDS
GGAGAAGTCTTCTTCGAGAT+CGG 0.567305 2_2:+62974716 None:intergenic
GCTCTCTGATTTAGGAGTTG+AGG 0.567708 2_2:+62971133 None:intergenic
TGTGACTGTGATGTGAGAAT+GGG 0.567828 2_2:+62974973 None:intergenic
AGAATACGCCGCCGCTGCGA+CGG 0.569538 2_2:-62974535 Msa0263530:CDS
AGCTGCGGCTTCACGTCTTG+AGG 0.570216 2_2:-62973364 Msa0263530:CDS
AAGCCTGTTTCAGATTACTT+CGG 0.573742 2_2:-62972395 Msa0263530:CDS
GTTGATCCTTGTCAAGAAAG+AGG 0.574493 2_2:-62973262 Msa0263530:CDS
GTGTGGTCATTGTCAAGCAT+TGG 0.575427 2_2:-62974562 Msa0263530:CDS
TTCTTGACAAGGATCAACGC+AGG 0.576510 2_2:+62973267 None:intergenic
CCTATAAAAGAGGTAAAGGA+GGG 0.576843 2_2:-62970943 Msa0263530:three_prime_UTR
CAGATATATGCTCCTTGGTG+TGG 0.578248 2_2:-62971691 Msa0263530:CDS
GCATAGAATGTGAGTGAAGG+AGG 0.588732 2_2:+62974836 None:intergenic
GATCTCGAAGAAGACTTCTC+CGG 0.588882 2_2:-62974714 Msa0263530:CDS
AAGTAGCAACAGCGATGTCA+AGG 0.589607 2_2:-62971072 Msa0263530:CDS
TCGGTTCCAAATGTTGGCAA+TGG 0.589689 2_2:+62971668 None:intergenic
ATCGCCGTGGTGGTGGTGTG+TGG 0.590102 2_2:+62974749 None:intergenic
CACCAGCTTCTGGTTCGTCG+AGG 0.592591 2_2:+62974781 None:intergenic
GGATTGATGCATGCTGCTTG+AGG 0.593443 2_2:+62971177 None:intergenic
CGAAAGGAAGAGAGAAACAG+AGG 0.600295 2_2:+62974928 None:intergenic
GGTGTTCATAAGAGTTACAC+TGG 0.600709 2_2:-62974402 Msa0263530:CDS
AAATGAGCATCCCAGGGCAA+AGG 0.601467 2_2:-62971575 Msa0263530:intron
GTCAAAGGACGTTCTCCTTG+AGG 0.604589 2_2:-62971802 Msa0263530:intron
TATGTAGGGTCCTGAGAGTG+AGG 0.607409 2_2:-62973391 Msa0263530:intron
GCCGCTGCGACGGAATTGAA+GGG 0.607410 2_2:-62974525 Msa0263530:CDS
GAAATTTGCGGAGAAACGAA+AGG 0.609190 2_2:+62974912 None:intergenic
ATTAAGAAGAAGACTGGACC+TGG 0.609346 2_2:-62974245 Msa0263530:CDS
GAAGTAATGTTATGTATACC+AGG 0.613032 2_2:+62974227 None:intergenic
ACCCTTCAATTCCGTCGCAG+CGG 0.618790 2_2:+62974524 None:intergenic
GAAGCATCAAAGTCTTTCAA+GGG 0.619244 2_2:-62972838 Msa0263530:CDS
TGCTGGGAAGAAGAGAAGAG+TGG 0.622841 2_2:+62971410 None:intergenic
CGTCGGAATCATCGCCGTGG+TGG 0.624569 2_2:+62974739 None:intergenic
GAATTCTACGCACCGTGGTG+TGG 0.628094 2_2:-62974579 Msa0263530:CDS
CAAGAGAGTCAATACTGCGA+AGG 0.629198 2_2:+62971623 None:intergenic
TTCGCATAGAATGTGAGTGA+AGG 0.632991 2_2:+62974833 None:intergenic
GGAAAAGGTGGACAAATGCA+AGG 0.634270 2_2:-62970921 Msa0263530:three_prime_UTR
TCTTGACAAGGATCAACGCA+GGG 0.634558 2_2:+62973268 None:intergenic
CTTGTAATAGCCAAGATGGA+CGG 0.635238 2_2:-62971604 Msa0263530:CDS
TTGATGCTTCCTGAAATACT+GGG 0.651591 2_2:+62972851 None:intergenic
TAGTCGAATTCTACGCACCG+TGG 0.657199 2_2:-62974584 Msa0263530:CDS
CTAAATACCCGAAATAAATG+GGG 0.657950 2_2:+62970834 None:intergenic
CTATAAAAGAGGTAAAGGAG+GGG 0.658403 2_2:-62970942 Msa0263530:three_prime_UTR
AACACAAAATGAGCATCCCA+GGG 0.664470 2_2:-62971581 Msa0263530:CDS
ATAGATTATTATTTGCAAGG+AGG 0.670586 2_2:+62970805 None:intergenic
TGTTGGCAATGGCCACACCA+AGG 0.684405 2_2:+62971679 None:intergenic
CGGCGTCGGAATCATCGCCG+TGG 0.685072 2_2:+62974736 None:intergenic
GCAGAGAAGCTATTGTGACA+TGG 0.687793 2_2:-62974268 Msa0263530:intron
TGAGAGTGAGGAGCTAGCTG+CGG 0.699295 2_2:-62973379 Msa0263530:CDS
ATGCAGGTACTTGCATACAC+CGG 0.700002 2_2:-62972232 Msa0263530:intron
CTGGGAAGAAGAGAAGAGTG+GGG 0.702683 2_2:+62971412 None:intergenic
GCTTGACAATGACCACACCA+CGG 0.724229 2_2:+62974567 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAAATTTTATTCAATTTTAT+TGG - chr2_2:62971408-62971427 Msa0263530:CDS 10.0%
!! AATGAGATTATATTATAATA+AGG + chr2_2:62972750-62972769 None:intergenic 10.0%
!! TTATTATAATATAATCTCAT+TGG - chr2_2:62972749-62972768 Msa0263530:intron 10.0%
!!! GAAAAATAAATAATTACTTT+TGG + chr2_2:62973382-62973401 None:intergenic 10.0%
!! ATCTTGTATTGTTAATTTAA+TGG - chr2_2:62974009-62974028 Msa0263530:intron 15.0%
!! TATACATAACATTACTTCAT+TGG - chr2_2:62971513-62971532 Msa0263530:intron 20.0%
!! AGAAATTAAACAAACCAAAA+TGG + chr2_2:62972512-62972531 None:intergenic 20.0%
!!! ATTATCATCTTGTCATTTTT+TGG - chr2_2:62972950-62972969 Msa0263530:intron 20.0%
!!! TTATCATCTTGTCATTTTTT+GGG - chr2_2:62972951-62972970 Msa0263530:intron 20.0%
!!! ATTACATCTTTTGAATAACT+TGG - chr2_2:62973449-62973468 Msa0263530:intron 20.0%
!! AGTTAACAAAACATAATTGA+TGG + chr2_2:62973814-62973833 None:intergenic 20.0%
!!! TCAATTATGTTTTGTTAACT+TGG - chr2_2:62973814-62973833 Msa0263530:intron 20.0%
!! AATATAACTGGTAAAATAGA+GGG + chr2_2:62973970-62973989 None:intergenic 20.0%
!! AAATATAACTGGTAAAATAG+AGG + chr2_2:62973971-62973990 None:intergenic 20.0%
!! TGTATTGTTAATTTAATGGT+TGG - chr2_2:62974013-62974032 Msa0263530:intron 20.0%
!! AAGATTGATCAATAAGTTAT+TGG + chr2_2:62974271-62974290 None:intergenic 20.0%
!!! TCATGAGTATTTAGAATTTT+GGG - chr2_2:62974856-62974875 Msa0263530:CDS 20.0%
!! AAAAAAATCCCCATTTATTT+CGG - chr2_2:62974893-62974912 Msa0263530:exon 20.0%
! TCAATGAAGAAAAGAATAGT+AGG + chr2_2:62971312-62971331 None:intergenic 25.0%
!! ACTATTCTTTTCTTCATTGA+TGG - chr2_2:62971312-62971331 Msa0263530:intron 25.0%
!!! GGTTATATGTTGATTTTAAG+TGG - chr2_2:62971917-62971936 Msa0263530:intron 25.0%
! AAGGAAGAAAGTTTAATCTT+TGG - chr2_2:62972045-62972064 Msa0263530:intron 25.0%
! TGCATACAAATTTAAACCTT+CGG - chr2_2:62972093-62972112 Msa0263530:intron 25.0%
! ATTAGCAAATCATAACGAAT+AGG + chr2_2:62972159-62972178 None:intergenic 25.0%
!!! AATTTGTTTTTCGATGAAGT+TGG - chr2_2:62972232-62972251 Msa0263530:intron 25.0%
!! ATTGGATTTTCAAAGATTGT+TGG + chr2_2:62972697-62972716 None:intergenic 25.0%
!! ATAATTACCTGTTTCTTGAT+TGG + chr2_2:62972715-62972734 None:intergenic 25.0%
!!! ATGTTTGAAACTTCTTTTTC+AGG - chr2_2:62972821-62972840 Msa0263530:intron 25.0%
!! TGATTTTATAAACAGAAGCA+TGG + chr2_2:62973093-62973112 None:intergenic 25.0%
! GTATCATCAAATTGAACAAA+GGG + chr2_2:62973404-62973423 None:intergenic 25.0%
! CCTCATTAAATGAAAGAAAA+AGG + chr2_2:62973653-62973672 None:intergenic 25.0%
!! CCTTTTTCTTTCATTTAATG+AGG - chr2_2:62973650-62973669 Msa0263530:intron 25.0%
!! TCAAATCTTCATTTTATCTC+AGG - chr2_2:62973699-62973718 Msa0263530:intron 25.0%
! AAAGTGTAAGCTATTTGATT+TGG - chr2_2:62973785-62973804 Msa0263530:intron 25.0%
!!! CAATTTTGATGAAATTGTCT+TGG - chr2_2:62973906-62973925 Msa0263530:intron 25.0%
! ATTAGAGATGCAAATATAAC+TGG + chr2_2:62973982-62974001 None:intergenic 25.0%
! ATTGTTAATTTAATGGTTGG+TGG - chr2_2:62974016-62974035 Msa0263530:intron 25.0%
! ATTGCTTAATATTCACTTAC+AGG + chr2_2:62974369-62974388 None:intergenic 25.0%
!! TTTTCTATAAGTCACTATGT+CGG + chr2_2:62974746-62974765 None:intergenic 25.0%
!!! CTCATGAGTATTTAGAATTT+TGG - chr2_2:62974855-62974874 Msa0263530:CDS 25.0%
!!! CATGAGTATTTAGAATTTTG+GGG - chr2_2:62974857-62974876 Msa0263530:CDS 25.0%
! AAAAAATCCCCATTTATTTC+GGG - chr2_2:62974894-62974913 Msa0263530:exon 25.0%
! ACTAAATACCCGAAATAAAT+GGG + chr2_2:62974905-62974924 None:intergenic 25.0%
! AACTAAATACCCGAAATAAA+TGG + chr2_2:62974906-62974925 None:intergenic 25.0%
! ATAGATTATTATTTGCAAGG+AGG + chr2_2:62974933-62974952 None:intergenic 25.0%
! AGCATAGATTATTATTTGCA+AGG + chr2_2:62974936-62974955 None:intergenic 25.0%
CTCATTGTGAATGAAATTTG+CGG + chr2_2:62970838-62970857 None:intergenic 30.0%
AGAATTCGACTAAAACGAAT+CGG + chr2_2:62971143-62971162 None:intergenic 30.0%
GAAGTAATGTTATGTATACC+AGG + chr2_2:62971511-62971530 None:intergenic 30.0%
AAGTTATATGCTATGAAGCA+CGG - chr2_2:62971746-62971765 Msa0263530:intron 30.0%
GAATGTAGTTAAATGTGTCT+TGG - chr2_2:62971821-62971840 Msa0263530:CDS 30.0%
!! ATTCGTAGATGGATTATCTA+TGG + chr2_2:62971993-62972012 None:intergenic 30.0%
GAAAGTTTAATCTTTGGACT+TGG - chr2_2:62972051-62972070 Msa0263530:intron 30.0%
! TATCGAATTTTCCATCTGTA+AGG + chr2_2:62972603-62972622 None:intergenic 30.0%
CTTGTAAAAACTGTTACCAA+AGG + chr2_2:62972664-62972683 None:intergenic 30.0%
TGAAAATCCAATCAAGAAAC+AGG - chr2_2:62972705-62972724 Msa0263530:intron 30.0%
CGTATCATCAAATTGAACAA+AGG + chr2_2:62973405-62973424 None:intergenic 30.0%
GGAAGAAAATTTGTGTTTGA+AGG - chr2_2:62973536-62973555 Msa0263530:intron 30.0%
AAAATTTGTGTTTGAAGGAG+AGG - chr2_2:62973541-62973560 Msa0263530:intron 30.0%
TAGCAAAATAACAGAGTCTA+AGG + chr2_2:62973605-62973624 None:intergenic 30.0%
ATCATACACATTCTGTAACA+TGG + chr2_2:62973628-62973647 None:intergenic 30.0%
! TTCATTTTATCTCAGGCATT+TGG - chr2_2:62973706-62973725 Msa0263530:intron 30.0%
! TCATTTTATCTCAGGCATTT+GGG - chr2_2:62973707-62973726 Msa0263530:intron 30.0%
ATCAAATAGCTTACACTTTC+AGG + chr2_2:62973784-62973803 None:intergenic 30.0%
! GTCTAACATGTTTGTTAACT+CGG - chr2_2:62973845-62973864 Msa0263530:intron 30.0%
AATATCAGATATATGCTCCT+TGG - chr2_2:62974039-62974058 Msa0263530:intron 30.0%
!! TTTGCAAGCTTGTTGTATAT+CGG + chr2_2:62974089-62974108 None:intergenic 30.0%
! GCAATGTCTAGTTTGAATTT+GGG + chr2_2:62974190-62974209 None:intergenic 30.0%
! AGCAATGTCTAGTTTGAATT+TGG + chr2_2:62974191-62974210 None:intergenic 30.0%
ATCAATAAGTTATTGGATGC+AGG + chr2_2:62974264-62974283 None:intergenic 30.0%
! TTTACCTCTTTTATAGGCTT+GGG + chr2_2:62974789-62974808 None:intergenic 30.0%
CTAAATACCCGAAATAAATG+GGG + chr2_2:62974904-62974923 None:intergenic 30.0%
AGTTTCTGAATCTTCGTAAC+CGG + chr2_2:62971043-62971062 None:intergenic 35.0%
AGCAACTTCATTATCTTCAG+TGG + chr2_2:62971265-62971284 None:intergenic 35.0%
TGCTCAGAAATTTGATGTTC+AGG - chr2_2:62971281-62971300 Msa0263530:intron 35.0%
GCTCAGAAATTTGATGTTCA+GGG - chr2_2:62971282-62971301 Msa0263530:intron 35.0%
! ACATGGATTAAGAAGAAGAC+TGG - chr2_2:62971484-62971503 Msa0263530:intron 35.0%
!!! TTCTGAGACCAAAGTTGTTT+TGG - chr2_2:62971558-62971577 Msa0263530:intron 35.0%
!! TCTGAGACCAAAGTTGTTTT+GGG - chr2_2:62971559-62971578 Msa0263530:intron 35.0%
GAGAAAACCCAAAACAACTT+TGG + chr2_2:62971569-62971588 None:intergenic 35.0%
!! AGAAGTGTAGCTTTGTTTCT+TGG - chr2_2:62971718-62971737 Msa0263530:intron 35.0%
GTATTCTTGGAATTCGTAGA+TGG + chr2_2:62972004-62972023 None:intergenic 35.0%
! ACGTGTCATGGTGTTAATTA+AGG - chr2_2:62972026-62972045 Msa0263530:intron 35.0%
AGTTTAATCTTTGGACTTGG+CGG - chr2_2:62972054-62972073 Msa0263530:intron 35.0%
!!! TTAAACCTTCGGTGTTTTCA+TGG - chr2_2:62972104-62972123 Msa0263530:intron 35.0%
!!! TAAACCTTCGGTGTTTTCAT+GGG - chr2_2:62972105-62972124 Msa0263530:intron 35.0%
TCGATGAAGTTGGCAATTAA+AGG - chr2_2:62972242-62972261 Msa0263530:intron 35.0%
TCCTGTTATGCACAATATGT+AGG - chr2_2:62972329-62972348 Msa0263530:intron 35.0%
CCTGTTATGCACAATATGTA+GGG - chr2_2:62972330-62972349 Msa0263530:intron 35.0%
! TGTCAATTTTTACCAGACTG+TGG - chr2_2:62972398-62972417 Msa0263530:CDS 35.0%
TTGAAAAGCTTTGCAACTTC+AGG + chr2_2:62972426-62972445 None:intergenic 35.0%
TTTCTTCCTCTTTCTTGACA+AGG + chr2_2:62972482-62972501 None:intergenic 35.0%
! GAAGAAAAGCTCAACCATTT+TGG - chr2_2:62972495-62972514 Msa0263530:intron 35.0%
! ATTTTCCATCTGTAAGGACA+CGG + chr2_2:62972597-62972616 None:intergenic 35.0%
TGTTACCAAAGGAATCTTGT+TGG + chr2_2:62972653-62972672 None:intergenic 35.0%
TTGATGCTTCCTGAAATACT+GGG + chr2_2:62972887-62972906 None:intergenic 35.0%
TTTGATGCTTCCTGAAATAC+TGG + chr2_2:62972888-62972907 None:intergenic 35.0%
! GAAGCATCAAAGTCTTTCAA+GGG - chr2_2:62972897-62972916 Msa0263530:intron 35.0%
ATCAAAGTCTTTCAAGGGAA+AGG - chr2_2:62972902-62972921 Msa0263530:intron 35.0%
CAAAAACATAAGCACCCTTT+AGG + chr2_2:62973239-62973258 None:intergenic 35.0%
! GAAACTGATAACGAAGATGT+TGG - chr2_2:62973316-62973335 Msa0263530:CDS 35.0%
AAGCCTGTTTCAGATTACTT+CGG - chr2_2:62973340-62973359 Msa0263530:CDS 35.0%
! ATACCGAAGTAATCTGAAAC+AGG + chr2_2:62973346-62973365 None:intergenic 35.0%
TCAGATTACTTCGGTATTAG+TGG - chr2_2:62973349-62973368 Msa0263530:CDS 35.0%
CAGATTACTTCGGTATTAGT+GGG - chr2_2:62973350-62973369 Msa0263530:CDS 35.0%
! TTTTCTTCCATCATCGTTTC+CGG + chr2_2:62973525-62973544 None:intergenic 35.0%
GGTGACTATTGACAGAATTA+AGG - chr2_2:62973562-62973581 Msa0263530:intron 35.0%
! AATAACAGAGTCTAAGGCAA+GGG + chr2_2:62973599-62973618 None:intergenic 35.0%
! AAATAACAGAGTCTAAGGCA+AGG + chr2_2:62973600-62973619 None:intergenic 35.0%
! CATTTTATCTCAGGCATTTG+GGG - chr2_2:62973708-62973727 Msa0263530:intron 35.0%
!!! AAGGTTTTAGCTTGTCTTCA+AGG + chr2_2:62973741-62973760 None:intergenic 35.0%
! ATTGGGTCTGACTTGAAAAA+AGG + chr2_2:62973760-62973779 None:intergenic 35.0%
AGCTTACACTTTCAGGAATT+GGG + chr2_2:62973777-62973796 None:intergenic 35.0%
TAGCTTACACTTTCAGGAAT+TGG + chr2_2:62973778-62973797 None:intergenic 35.0%
GGTGATGTGAAAATAGTTGT+TGG - chr2_2:62973880-62973899 Msa0263530:intron 35.0%
AATTGTCTTGGATGAGTCAA+AGG - chr2_2:62973918-62973937 Msa0263530:intron 35.0%
!! TGTATATCGGTTCCAAATGT+TGG + chr2_2:62974076-62974095 None:intergenic 35.0%
!! CAAAACTTTTGTTTCCTGCT+GGG + chr2_2:62974344-62974363 None:intergenic 35.0%
!! TCAAAACTTTTGTTTCCTGC+TGG + chr2_2:62974345-62974364 None:intergenic 35.0%
! TTACCTCTTTTATAGGCTTG+GGG + chr2_2:62974788-62974807 None:intergenic 35.0%
! CTTTACCTCTTTTATAGGCT+TGG + chr2_2:62974790-62974809 None:intergenic 35.0%
CAAGCCTATAAAAGAGGTAA+AGG - chr2_2:62974788-62974807 Msa0263530:CDS 35.0%
CCTATAAAAGAGGTAAAGGA+GGG - chr2_2:62974792-62974811 Msa0263530:CDS 35.0%
CTATAAAAGAGGTAAAGGAG+GGG - chr2_2:62974793-62974812 Msa0263530:CDS 35.0%
!!! GTATTTAGAATTTTGGGGTG+AGG - chr2_2:62974862-62974881 Msa0263530:CDS 35.0%
TGTGACTGTGATGTGAGAAT+GGG + chr2_2:62970765-62970784 None:intergenic 40.0%
GAAATTTGCGGAGAAACGAA+AGG + chr2_2:62970826-62970845 None:intergenic 40.0%
TTCGCATAGAATGTGAGTGA+AGG + chr2_2:62970905-62970924 None:intergenic 40.0%
!! TCTTTTTCGTCGAATTCAGG+GGG + chr2_2:62971072-62971091 None:intergenic 40.0%
!! GTCTTTTTCGTCGAATTCAG+GGG + chr2_2:62971073-62971092 None:intergenic 40.0%
!! CGTCTTTTTCGTCGAATTCA+GGG + chr2_2:62971074-62971093 None:intergenic 40.0%
!! ACGTCTTTTTCGTCGAATTC+AGG + chr2_2:62971075-62971094 None:intergenic 40.0%
GGTGTTCATAAGAGTTACAC+TGG - chr2_2:62971333-62971352 Msa0263530:intron 40.0%
ATTAAGAAGAAGACTGGACC+TGG - chr2_2:62971490-62971509 Msa0263530:intron 40.0%
! ACACATTCGAACAGAAGTGT+CGG - chr2_2:62971885-62971904 Msa0263530:intron 40.0%
CCATGACACGTTAGTATTCT+TGG + chr2_2:62972017-62972036 None:intergenic 40.0%
CCAAGAATACTAACGTGTCA+TGG - chr2_2:62972014-62972033 Msa0263530:CDS 40.0%
CCCTACATATTGTGCATAAC+AGG + chr2_2:62972333-62972352 None:intergenic 40.0%
GTTGATCCTTGTCAAGAAAG+AGG - chr2_2:62972473-62972492 Msa0263530:intron 40.0%
TACCAAAGGAATCTTGTTGG+AGG + chr2_2:62972650-62972669 None:intergenic 40.0%
GAAATTGCTCCCAGTATTTC+AGG - chr2_2:62972875-62972894 Msa0263530:CDS 40.0%
!! GGAAGCATCAAAGTCTTTCA+AGG - chr2_2:62972896-62972915 Msa0263530:intron 40.0%
CTGAATTCTTGTCGAAAGCA+AGG + chr2_2:62973023-62973042 None:intergenic 40.0%
CTTGCTTTCGACAAGAATTC+AGG - chr2_2:62973021-62973040 Msa0263530:intron 40.0%
AGGTGTAGTGTACTTCTTAG+TGG - chr2_2:62973041-62973060 Msa0263530:CDS 40.0%
GGTGTAGTGTACTTCTTAGT+GGG - chr2_2:62973042-62973061 Msa0263530:CDS 40.0%
AAACATAAGCACCCTTTAGG+AGG + chr2_2:62973236-62973255 None:intergenic 40.0%
AGCACAAAGATCAACTGCAA+TGG + chr2_2:62973292-62973311 None:intergenic 40.0%
ACCAGTTGAATTTCCAATGC+AGG - chr2_2:62973487-62973506 Msa0263530:intron 40.0%
ACCTGCATTGGAAATTCAAC+TGG + chr2_2:62973491-62973510 None:intergenic 40.0%
CTCTCTTGTAATAGCCAAGA+TGG - chr2_2:62974127-62974146 Msa0263530:intron 40.0%
CTTGTAATAGCCAAGATGGA+CGG - chr2_2:62974131-62974150 Msa0263530:intron 40.0%
! ATTTTGTGTTCCGTCCATCT+TGG + chr2_2:62974144-62974163 None:intergenic 40.0%
AACACAAAATGAGCATCCCA+GGG - chr2_2:62974154-62974173 Msa0263530:intron 40.0%
ATGTTCACTTTGCAGTCTGA+TGG - chr2_2:62974297-62974316 Msa0263530:intron 40.0%
CTGCTTGAGGAACTTGTAAA+AGG + chr2_2:62974548-62974567 None:intergenic 40.0%
ACATCAGAGCTCTCTGATTT+AGG + chr2_2:62974613-62974632 None:intergenic 40.0%
!! GTTGCTACTTTGGTTCTCTT+TGG + chr2_2:62974653-62974672 None:intergenic 40.0%
GCCTATAAAAGAGGTAAAGG+AGG - chr2_2:62974791-62974810 Msa0263530:CDS 40.0%
! CCCTCCTTTACCTCTTTTAT+AGG + chr2_2:62974795-62974814 None:intergenic 40.0%
GTGTGACTGTGATGTGAGAA+TGG + chr2_2:62970766-62970785 None:intergenic 45.0%
CGAAAGGAAGAGAGAAACAG+AGG + chr2_2:62970810-62970829 None:intergenic 45.0%
GAAGAAGAGAAGGGTAGTGA+GGG + chr2_2:62970878-62970897 None:intergenic 45.0%
AGAAGAAGAGAAGGGTAGTG+AGG + chr2_2:62970879-62970898 None:intergenic 45.0%
GAAGGAGGAGAAGAAGAGAA+GGG + chr2_2:62970887-62970906 None:intergenic 45.0%
TGAAGGAGGAGAAGAAGAGA+AGG + chr2_2:62970888-62970907 None:intergenic 45.0%
GCATAGAATGTGAGTGAAGG+AGG + chr2_2:62970902-62970921 None:intergenic 45.0%
GGAGAAGTCTTCTTCGAGAT+CGG + chr2_2:62971022-62971041 None:intergenic 45.0%
GATCTCGAAGAAGACTTCTC+CGG - chr2_2:62971021-62971040 Msa0263530:three_prime_UTR 45.0%
GTGTGGTCATTGTCAAGCAT+TGG - chr2_2:62971173-62971192 Msa0263530:CDS 45.0%
GCAGAGAAGCTATTGTGACA+TGG - chr2_2:62971467-62971486 Msa0263530:intron 45.0%
TCAACCCATGAAAACACCGA+AGG + chr2_2:62972112-62972131 None:intergenic 45.0%
! TTCATGGGTTGACTCTTGTG+TGG - chr2_2:62972120-62972139 Msa0263530:intron 45.0%
TCTTGACAAGGATCAACGCA+GGG + chr2_2:62972470-62972489 None:intergenic 45.0%
TTCTTGACAAGGATCAACGC+AGG + chr2_2:62972471-62972490 None:intergenic 45.0%
CTCCTCCAACAAGATTCCTT+TGG - chr2_2:62972645-62972664 Msa0263530:intron 45.0%
ATCCAGCTCTTCCTCCTAAA+GGG - chr2_2:62973222-62973241 Msa0263530:intron 45.0%
GCAGTTGATCTTTGTGCTTG+TGG - chr2_2:62973294-62973313 Msa0263530:CDS 45.0%
GTGTATGCAAGTACCTGCAT+TGG + chr2_2:62973503-62973522 None:intergenic 45.0%
ATGCAGGTACTTGCATACAC+CGG - chr2_2:62973503-62973522 Msa0263530:intron 45.0%
TTAACTCGGCGACAGAATGA+TGG - chr2_2:62973859-62973878 Msa0263530:intron 45.0%
AGGGTCAAAGTTGTACCTCA+AGG + chr2_2:62973951-62973970 None:intergenic 45.0%
CAGATATATGCTCCTTGGTG+TGG - chr2_2:62974044-62974063 Msa0263530:intron 45.0%
TCGGTTCCAAATGTTGGCAA+TGG + chr2_2:62974070-62974089 None:intergenic 45.0%
CAAGAGAGTCAATACTGCGA+AGG + chr2_2:62974115-62974134 None:intergenic 45.0%
GAACACAAAATGAGCATCCC+AGG - chr2_2:62974153-62974172 Msa0263530:intron 45.0%
! TTTGGGTTTACCTTTGCCCT+GGG + chr2_2:62974173-62974192 None:intergenic 45.0%
! ATTTGGGTTTACCTTTGCCC+TGG + chr2_2:62974174-62974193 None:intergenic 45.0%
!! CTGGTTTCTGGAGCTTGAAT+GGG + chr2_2:62974582-62974601 None:intergenic 45.0%
TCTGATTTAGGAGTTGAGGC+TGG + chr2_2:62974601-62974620 None:intergenic 45.0%
GCTCTCTGATTTAGGAGTTG+AGG + chr2_2:62974605-62974624 None:intergenic 45.0%
! ATCAGAGAGCTCTGATGTCA+AGG - chr2_2:62974615-62974634 Msa0263530:CDS 45.0%
! TGACATCGCTGTTGCTACTT+TGG + chr2_2:62974663-62974682 None:intergenic 45.0%
AAGTAGCAACAGCGATGTCA+AGG - chr2_2:62974663-62974682 Msa0263530:CDS 45.0%
CTTGGGGAGAGAAGAATTAG+TGG + chr2_2:62974772-62974791 None:intergenic 45.0%
TCTCCCCAAGCCTATAAAAG+AGG - chr2_2:62974782-62974801 Msa0263530:CDS 45.0%
AAGAGGTAAAGGAGGGGAAA+AGG - chr2_2:62974799-62974818 Msa0263530:CDS 45.0%
GGAAAAGGTGGACAAATGCA+AGG - chr2_2:62974814-62974833 Msa0263530:CDS 45.0%
AGAGAAGGGTAGTGAGGGAA+AGG + chr2_2:62970873-62970892 None:intergenic 50.0%
TTTCGTCGAATTCAGGGGGT+TGG + chr2_2:62971068-62971087 None:intergenic 50.0%
TAGTCGAATTCTACGCACCG+TGG - chr2_2:62971151-62971170 Msa0263530:CDS 50.0%
GCTTGACAATGACCACACCA+CGG + chr2_2:62971171-62971190 None:intergenic 50.0%
!! CGACACTGACTCATCGACAT+TGG - chr2_2:62971772-62971791 Msa0263530:intron 50.0%
TGTCACTGTCGACACTGACA+CGG + chr2_2:62971855-62971874 None:intergenic 50.0%
! GTGTCGACAGTGACACATGT+TGG - chr2_2:62971860-62971879 Msa0263530:CDS 50.0%
!! CAGAAGTGTCGGTGCTACAA+AGG - chr2_2:62971896-62971915 Msa0263530:intron 50.0%
TTTGGACTTGGCGGAATTCG+TGG - chr2_2:62972063-62972082 Msa0263530:intron 50.0%
TATGTAGGGTCCTGAGAGTG+AGG - chr2_2:62972344-62972363 Msa0263530:intron 50.0%
CAACTTCAGGATCCACAGTC+TGG + chr2_2:62972413-62972432 None:intergenic 50.0%
GTTCACCGTGTCCTTACAGA+TGG - chr2_2:62972589-62972608 Msa0263530:intron 50.0%
GATCCAGCTCTTCCTCCTAA+AGG - chr2_2:62973221-62973240 Msa0263530:intron 50.0%
GCATACACCGGAAACGATGA+TGG - chr2_2:62973515-62973534 Msa0263530:intron 50.0%
GTCAAAGGACGTTCTCCTTG+AGG - chr2_2:62973933-62973952 Msa0263530:intron 50.0%
GTGTGGCCATTGCCAACATT+TGG - chr2_2:62974061-62974080 Msa0263530:intron 50.0%
AAATGAGCATCCCAGGGCAA+AGG - chr2_2:62974160-62974179 Msa0263530:CDS 50.0%
CTGGGAAGAAGAGAAGAGTG+GGG + chr2_2:62974326-62974345 None:intergenic 50.0%
GCTGGGAAGAAGAGAAGAGT+GGG + chr2_2:62974327-62974346 None:intergenic 50.0%
TGCTGGGAAGAAGAGAAGAG+TGG + chr2_2:62974328-62974347 None:intergenic 50.0%
ACTCTTCTCTTCTTCCCAGC+AGG - chr2_2:62974327-62974346 Msa0263530:intron 50.0%
GATCACTCTCGCACACACAT+GGG + chr2_2:62974437-62974456 None:intergenic 50.0%
AGATCACTCTCGCACACACA+TGG + chr2_2:62974438-62974457 None:intergenic 50.0%
! GGATTGATGCATGCTGCTTG+AGG + chr2_2:62974561-62974580 None:intergenic 50.0%
!! GCTGGTTTCTGGAGCTTGAA+TGG + chr2_2:62974583-62974602 None:intergenic 50.0%
!! TAGGAGTTGAGGCTGGTTTC+TGG + chr2_2:62974594-62974613 None:intergenic 50.0%
AGGTAAAGGAGGGGAAAAGG+TGG - chr2_2:62974802-62974821 Msa0263530:CDS 50.0%
TTCCTCGACGAACCAGAAGC+TGG - chr2_2:62970952-62970971 Msa0263530:three_prime_UTR 55.0%
GTGGTGGTTTCACCAGCTTC+TGG + chr2_2:62970967-62970986 None:intergenic 55.0%
GTCTTCTTCGAGATCGGCGT+CGG + chr2_2:62971016-62971035 None:intergenic 55.0%
GAATTCTACGCACCGTGGTG+TGG - chr2_2:62971156-62971175 Msa0263530:CDS 55.0%
ACCCTTCAATTCCGTCGCAG+CGG + chr2_2:62971214-62971233 None:intergenic 55.0%
GACTTGGCGGAATTCGTGGT+TGG - chr2_2:62972067-62972086 Msa0263530:intron 55.0%
TGAGAGTGAGGAGCTAGCTG+CGG - chr2_2:62972356-62972375 Msa0263530:intron 55.0%
! AAGGATCAACGCAGGGCGTT+TGG + chr2_2:62972463-62972482 None:intergenic 55.0%
! CACCCTTTAGGAGGAAGAGC+TGG + chr2_2:62973227-62973246 None:intergenic 55.0%
TGTTGGCAATGGCCACACCA+AGG + chr2_2:62974059-62974078 None:intergenic 55.0%
!! CACCAGCTTCTGGTTCGTCG+AGG + chr2_2:62970957-62970976 None:intergenic 60.0%
ACCACCACACACCACCACCA+CGG - chr2_2:62970982-62971001 Msa0263530:three_prime_UTR 60.0%
CTTCAATTCCGTCGCAGCGG+CGG + chr2_2:62971211-62971230 None:intergenic 60.0%
GCCGCTGCGACGGAATTGAA+GGG - chr2_2:62971210-62971229 Msa0263530:CDS 60.0%
GCAGCTAGCTCCTCACTCTC+AGG + chr2_2:62972357-62972376 None:intergenic 60.0%
AGCTGCGGCTTCACGTCTTG+AGG - chr2_2:62972371-62972390 Msa0263530:intron 60.0%
!! GTGGTGGTGGTGTGTGGTGG+TGG + chr2_2:62970983-62971002 None:intergenic 65.0%
!! ATCGCCGTGGTGGTGGTGTG+TGG + chr2_2:62970989-62971008 None:intergenic 65.0%
CGGAATCATCGCCGTGGTGG+TGG + chr2_2:62970996-62971015 None:intergenic 65.0%
CGTCGGAATCATCGCCGTGG+TGG + chr2_2:62970999-62971018 None:intergenic 65.0%
AGAATACGCCGCCGCTGCGA+CGG - chr2_2:62971200-62971219 Msa0263530:CDS 65.0%
CGCCGCTGCGACGGAATTGA+AGG - chr2_2:62971209-62971228 Msa0263530:CDS 65.0%
!! GCCGTGGTGGTGGTGTGTGG+TGG + chr2_2:62970986-62971005 None:intergenic 70.0%
! CGGCGTCGGAATCATCGCCG+TGG + chr2_2:62971002-62971021 None:intergenic 70.0%
GTCGCAGCGGCGGCGTATTC+TGG + chr2_2:62971201-62971220 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 62970757 62975000 62970757 ID=Msa0263530;Name=Msa0263530
chr2_2 mRNA 62970757 62975000 62970757 ID=Msa0263530-mRNA-1;Parent=Msa0263530;Name=Msa0263530-mRNA-1;_AED=0.06;_eAED=0.06;_QI=96|1|1|1|1|1|12|304|565
chr2_2 exon 62970757 62971243 62970757 ID=Msa0263530-mRNA-1:exon:19529;Parent=Msa0263530-mRNA-1
chr2_2 exon 62971389 62971445 62971389 ID=Msa0263530-mRNA-1:exon:19528;Parent=Msa0263530-mRNA-1
chr2_2 exon 62971576 62971710 62971576 ID=Msa0263530-mRNA-1:exon:19527;Parent=Msa0263530-mRNA-1
chr2_2 exon 62971803 62971883 62971803 ID=Msa0263530-mRNA-1:exon:19526;Parent=Msa0263530-mRNA-1
chr2_2 exon 62971968 62972036 62971968 ID=Msa0263530-mRNA-1:exon:19525;Parent=Msa0263530-mRNA-1
chr2_2 exon 62972174 62972248 62972174 ID=Msa0263530-mRNA-1:exon:19524;Parent=Msa0263530-mRNA-1
chr2_2 exon 62972373 62972459 62972373 ID=Msa0263530-mRNA-1:exon:19523;Parent=Msa0263530-mRNA-1
chr2_2 exon 62972834 62972914 62972834 ID=Msa0263530-mRNA-1:exon:19522;Parent=Msa0263530-mRNA-1
chr2_2 exon 62973031 62973149 62973031 ID=Msa0263530-mRNA-1:exon:19521;Parent=Msa0263530-mRNA-1
chr2_2 exon 62973241 62973406 62973241 ID=Msa0263530-mRNA-1:exon:19520;Parent=Msa0263530-mRNA-1
chr2_2 exon 62974157 62974286 62974157 ID=Msa0263530-mRNA-1:exon:19519;Parent=Msa0263530-mRNA-1
chr2_2 exon 62974390 62975000 62974390 ID=Msa0263530-mRNA-1:exon:19518;Parent=Msa0263530-mRNA-1
chr2_2 five_prime_UTR 62974905 62975000 62974905 ID=Msa0263530-mRNA-1:five_prime_utr;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62974390 62974904 62974390 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62974157 62974286 62974157 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62973241 62973406 62973241 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62973031 62973149 62973031 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62972834 62972914 62972834 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62972373 62972459 62972373 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62972174 62972248 62972174 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62971968 62972036 62971968 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62971803 62971883 62971803 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62971576 62971710 62971576 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62971389 62971445 62971389 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 CDS 62971061 62971243 62971061 ID=Msa0263530-mRNA-1:cds;Parent=Msa0263530-mRNA-1
chr2_2 three_prime_UTR 62970757 62971060 62970757 ID=Msa0263530-mRNA-1:three_prime_utr;Parent=Msa0263530-mRNA-1
Gene Sequence

>Msa0263530

ATGAGAATTCTCATTCTCCTTTCCCTCACTACCCTTCTCTTCTTCTCCTCCTTCACTCACATTCTATGCGAACAAGATATCGATGACGAAGATCTCAGTTTCCTCGACGAACCAGAAGCTGGTGAAACCACCACCACACACCACCACCACGGCGATGATTCCGACGCCGATCTCGAAGAAGACTTCTCCGGTTACGAAGATTCAGAAACTTACCAACCCCCTGAATTCGACGAAAAAGACGTCGTCGTTTTGAATGATACAAACTTCACTGACGTAGTCAACAAAAACCGATTCGTTTTAGTCGAATTCTACGCACCGTGGTGTGGTCATTGTCAAGCATTGGCACCAGAATACGCCGCCGCTGCGACGGAATTGAAGGGTGAAAATGTCATTTTAGCTAAACTTGATGCCACTGAAGATAATGAAGTTGCTCAGAAATTTGATGTTCAGGGTTTTCCTACTATTCTTTTCTTCATTGATGGTGTTCATAAGAGTTACACTGGTCAAAGAACAAAAGAAGCTATTGTGACATGGATTAAGAAGAAGACTGGACCTGGTATACATAACATTACTTCATTGGATGATGCTAAGACAATATTGTCTTCTGAGACCAAAGTTGTTTTGGGTTTTCTCAATTCTTTAGTTGGTCCTGAGAGTGAGGAGCTAGCTGCGGCTTCACGTCTTGAGGATGATGTCAATTTTTACCAGACTGTGGATCCTGAAGTTGCAAAGCTTTTCAATATTGACGCTAATGCCAAACGCCCTGCGTTGATCCTTGTCAAGAAAGAGGAAGAAAAGCTCAACCATTTTGATGGAAAATTCGATAAGTCTGCAATAGTAGACTTTGTCTCCTCCAACAAGATTCCTTTGGTAACAGTTTTTACAAGAGAAAATGCTCCAACAATCTTTGAAAATCCAATCAAGAAACAGGTGTTGCTGTTTGTGACTTCAAATGATTCAGAGAAATTGCTCCCAGTATTTCAGGAAGCATCAAAGTCTTTCAAGGGAAAGTTGATCTTTGTGCTTGTGGAAACTGATAACGAAGATGTTGGAAAGCCTGTTTCAGATTACTTCGGTATTAGTGGGACTGCTCCAAAAGTACTTGCATACACCGGAAACGATGATGGAAGAAAATTTGTGTTTGAAGGAGAGGTGACTATTGACAGAATTAAGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCTTTTTTCAAGTCAGACCCAATTCCTGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGAAACAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGACGTTCTCCTTGAGATATATGCTCCTTGGTGTGGCCATTGCCAACATTTGGAACCGATATACAACAAGCTTGCAAAACACCTTCGCAGTATTGACTCTCTTGTAATAGCCAAGATGGACGGAACACAAAATGAGCATCCCAGGGCAAAGTCTGATGGATTCCCCACTCTTCTCTTCTTCCCAGCAGGAAACAAAAGTTTTGATCCTATTACTGTTGAGACAGATCGCACTGTTGTAGCCTTTTACAAGTTCCTCAAGCAGCATGCATCAATCCCATTCAAGCTCCAGAAACCAGCCTCAACTCCTAAATCAGAGAGCTCTGATGTCAAGGAGAGTTCTGATGCCAAAGAGAACCAAAGTAGCAACAGCGATGTCAAGGATGAGCTATGA
Protein sequence

>Msa0263530

MRILILLSLTTLLFFSSFTHILCEQDIDDEDLSFLDEPEAGETTTTHHHHGDDSDADLEEDFSGYEDSETYQPPEFDEKDVVVLNDTNFTDVVNKNRFVLVEFYAPWCGHCQALAPEYAAAATELKGENVILAKLDATEDNEVAQKFDVQGFPTILFFIDGVHKSYTGQRTKEAIVTWIKKKTGPGIHNITSLDDAKTILSSETKVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVDPEVAKLFNIDANAKRPALILVKKEEEKLNHFDGKFDKSAIVDFVSSNKIPLVTVFTRENAPTIFENPIKKQVLLFVTSNDSEKLLPVFQEASKSFKGKLIFVLVETDNEDVGKPVSDYFGISGTAPKVLAYTGNDDGRKFVFEGEVTIDRIKAFGEDFLEDKLKPFFKSDPIPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQHLEPIYNKLAKHLRSIDSLVIAKMDGTQNEHPRAKSDGFPTLLFFPAGNKSFDPITVETDRTVVAFYKFLKQHASIPFKLQKPASTPKSESSDVKESSDAKENQSSNSDVKDEL*