AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0263590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263590 MtrunA17_Chr2g0326731 97.616 839 14 1 1 833 1 839 0.0 1701
Msa0263590 MtrunA17_Chr4g0028991 79.339 847 158 8 1 833 3 846 0.0 1382
Msa0263590 MtrunA17_Chr2g0292391 63.690 840 279 10 13 833 4 836 0.0 1092
Msa0263590 MtrunA17_Chr2g0331131 61.916 835 286 11 21 833 12 836 0.0 1044
Msa0263590 MtrunA17_Chr3g0140351 61.602 849 293 13 3 833 2 835 0.0 1039
Msa0263590 MtrunA17_Chr8g0340411 59.595 839 304 12 16 833 8 832 0.0 1027
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0263590 AT5G60690.1 75.236 848 187 8 1 833 3 842 0.0 1313
Msa0263590 AT2G34710.1 62.471 866 275 13 3 833 2 852 0.0 1072
Msa0263590 AT1G30490.1 62.560 836 277 12 21 833 19 841 0.0 1049
Msa0263590 AT1G52150.1 61.391 834 289 14 21 833 15 836 0.0 1028
Msa0263590 AT1G52150.2 61.271 834 291 14 21 833 15 837 0.0 1027
Msa0263590 AT4G32880.1 59.666 838 304 14 17 833 9 833 0.0 1004
Msa0263590 AT1G52150.3 61.062 791 265 14 21 785 15 788 0.0 958
Msa0263590 AT5G32670.1 64.286 70 25 0 289 358 37 106 2.60e-25 104
Msa0263590 AT5G52170.2 25.203 369 218 11 24 355 61 408 6.52e-15 79.3
Msa0263590 AT5G52170.3 25.203 369 218 11 24 355 61 408 8.53e-15 79.0
Msa0263590 AT5G52170.1 25.203 369 218 11 24 355 61 408 8.53e-15 79.0
Msa0263590 AT4G04890.2 33.333 120 62 3 23 132 65 176 3.68e-11 67.4
Msa0263590 AT4G04890.1 33.333 120 62 3 23 132 65 176 3.68e-11 67.4

Find 254 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATAAACACAAACCTTATT+TGG 0.057726 2_2:+63129190 Msa0263590:five_prime_UTR
CTGAGATCTGATTCTCTTAT+TGG 0.129142 2_2:+63133061 Msa0263590:CDS
GAAGAAGTACTTAAGTTAAA+AGG 0.178801 2_2:+63128779 Msa0263590:five_prime_UTR
TGGCTTTCTCGTTCATTAAT+TGG 0.181977 2_2:+63133638 Msa0263590:CDS
TGGCTGCTGCTCGCGACTTC+TGG 0.215757 2_2:+63130820 Msa0263590:CDS
GTCTGAAAGCAGTCATTATC+TGG 0.224488 2_2:+63133027 Msa0263590:intron
TAGGGATGTTCATCTCTTAC+AGG 0.241280 2_2:+63132267 Msa0263590:CDS
TTTACAAGATCAAATCATTT+TGG 0.241363 2_2:-63133855 None:intergenic
TCTAAGATACACTACAAATT+TGG 0.241855 2_2:+63130845 Msa0263590:CDS
GGCACCAAGGGAGCATCTTC+TGG 0.244403 2_2:-63132460 None:intergenic
TGAGCTAGTGTAAGTGCTTC+TGG 0.266525 2_2:-63132902 None:intergenic
AAGTACTTCTTCTTCCTCTA+TGG 0.275363 2_2:-63128768 None:intergenic
GATGCTCCCTTGGTGCCTTC+TGG 0.276911 2_2:+63132466 Msa0263590:CDS
CACTCTTAAGACCCCAAATA+AGG 0.277810 2_2:-63129203 None:intergenic
TATAAACACAAACCTTATTT+GGG 0.278015 2_2:+63129191 Msa0263590:five_prime_UTR
TAGAGCGGCCGCAGCACTTC+TGG 0.282965 2_2:-63131233 None:intergenic
GATTCGGGAGTGCCCGGTTT+TGG 0.283665 2_2:+63129502 Msa0263590:CDS
TGCAGGCACTTCGCTATATC+AGG 0.289145 2_2:+63131383 Msa0263590:intron
GTTTCACTAGTTGGAACTAT+TGG 0.292623 2_2:+63129069 Msa0263590:five_prime_UTR
GCAAGTTCCCTTTCACTCCT+TGG 0.320702 2_2:+63131724 Msa0263590:CDS
CCGTCAGCATTTGGAGCTGC+TGG 0.331315 2_2:-63130002 None:intergenic
GGCTCAATGTTGGCCAAAAC+CGG 0.331817 2_2:-63129515 None:intergenic
GTCGATTGGGTCCAGATGCC+TGG 0.336793 2_2:+63130242 Msa0263590:CDS
TGAGAAGGCAACAGCTGATT+CGG 0.337430 2_2:+63129486 Msa0263590:CDS
TTGTGTTGTATTGCCTCTTT+TGG 0.341025 2_2:+63129268 Msa0263590:intron
TGCTGAACAGATTGAAGCTT+TGG 0.342547 2_2:+63129427 Msa0263590:CDS
GAACTCAGACCTGCAGGTTT+AGG 0.343156 2_2:-63131117 None:intergenic
GAAAGGTCACTGTCTGGTTC+TGG 0.344827 2_2:+63130980 Msa0263590:CDS
CGTTAGCATGAGCTGTTGCC+TGG 0.351416 2_2:-63132679 None:intergenic
CCATCCAGCGTTAACACTTC+TGG 0.355722 2_2:+63132854 Msa0263590:CDS
GCACATTACAAGATCATGTT+TGG 0.359217 2_2:+63133791 Msa0263590:three_prime_UTR
CTACCTTCATCCCAGGCATC+TGG 0.361257 2_2:-63130253 None:intergenic
TCAAGGTTTGGTTTCAGAAT+AGG 0.367043 2_2:+63129546 Msa0263590:CDS
GGATTTCATGTTTCACTAGT+TGG 0.370698 2_2:+63129060 Msa0263590:five_prime_UTR
GGGTTTGCTTGTATGCCAGC+TGG 0.372830 2_2:+63133526 Msa0263590:CDS
GCAAATATCCCAACCGAATC+CGG 0.374500 2_2:-63130412 None:intergenic
CTAGAAATTATCCGCCTTGA+AGG 0.374957 2_2:+63132217 Msa0263590:CDS
CGAACCTTGGATTTGACATC+TGG 0.378202 2_2:+63132644 Msa0263590:CDS
GACCGCTCTCAAAAGGAAAC+TGG 0.380637 2_2:-63132748 None:intergenic
TCACTGTCTGGTTCTGGTGC+TGG 0.384059 2_2:+63130986 Msa0263590:CDS
CGAGCAGCAGCCAGCGTCAT+TGG 0.385288 2_2:-63130810 None:intergenic
TGTGAGGCAGCTGCAGCATT+AGG 0.386159 2_2:-63131010 None:intergenic
CTTCTCAATGAACTAGGCTT+AGG 0.391335 2_2:-63129470 None:intergenic
TGCGATGAATAAGCTGTTGA+TGG 0.394036 2_2:+63129738 Msa0263590:CDS
TCACTCAAAGCTGGCTCCTA+TGG 0.398623 2_2:+63131979 Msa0263590:CDS
GGCTTACAATGTGTAATTGC+TGG 0.399962 2_2:-63129822 None:intergenic
TTGTTAGCCTGGTCCGGATT+CGG 0.407612 2_2:+63130399 Msa0263590:intron
ACAATGTTCCCAGCTGGAAA+TGG 0.408347 2_2:+63130673 Msa0263590:CDS
ATGTCTCCTCCGCAATTGAT+AGG 0.410911 2_2:-63130184 None:intergenic
TCATTTATATGACCTATTGC+AGG 0.413124 2_2:+63133661 Msa0263590:exon
CGCTGTGCAGGCGGTTGCAA+CGG 0.418938 2_2:+63132823 Msa0263590:intron
CATTGTTTGTTAGCCTGGTC+CGG 0.420545 2_2:+63130393 Msa0263590:intron
GCTGGCTCCTATGGCTATCC+TGG 0.420819 2_2:+63131988 Msa0263590:CDS
TCACAGCTGGTGAATGAGAA+TGG 0.421055 2_2:+63129790 Msa0263590:CDS
TCCGTTGCCACCTTGAGAAA+TGG 0.423146 2_2:-63130434 None:intergenic
ACGCCACTACCGTCAGCATT+TGG 0.423791 2_2:-63130011 None:intergenic
AATGGATCTGCCAGAGCTAT+AGG 0.426936 2_2:+63132924 Msa0263590:CDS
CGTCAGCATTTGGAGCTGCT+GGG 0.428553 2_2:-63130001 None:intergenic
CTCAGCTTCAGAGTGTGAAC+AGG 0.430488 2_2:+63129707 Msa0263590:CDS
GCATCTCTCAATGAATTCAT+AGG 0.433129 2_2:-63130053 None:intergenic
CACAGCTGGTGAATGAGAAT+GGG 0.435607 2_2:+63129791 Msa0263590:CDS
GAGAAGGCAACAGCTGATTC+GGG 0.436593 2_2:+63129487 Msa0263590:CDS
TCTGGGAACATGTCATCAAT+TGG 0.437275 2_2:-63132442 None:intergenic
TTCTTGAACAAGCTTAGCTT+AGG 0.438858 2_2:+63128648 Msa0263590:five_prime_UTR
TACAGGAACTGCTGTCGATT+GGG 0.439880 2_2:+63130229 Msa0263590:CDS
GTAAGTGCTTCTGGAGTGCC+AGG 0.441398 2_2:-63132893 None:intergenic
AGCCTAAGCAGATCAAGGTT+TGG 0.446562 2_2:+63129534 Msa0263590:CDS
CTAAAAGTTCTAAGAACTGC+AGG 0.446795 2_2:-63131457 None:intergenic
TCATTTGAACAGTTATGTAC+TGG 0.447517 2_2:+63132373 Msa0263590:intron
GGGATCTGCATGTCAACAAT+GGG 0.449516 2_2:+63133547 Msa0263590:CDS
AGACAACAGTGTTCATTGCT+TGG 0.451078 2_2:+63133618 Msa0263590:CDS
GAGCAGCATAAAATAGCATC+TGG 0.451862 2_2:-63133115 None:intergenic
AGGCATGATTGCTTGATTGC+CGG 0.454592 2_2:-63132031 None:intergenic
AGCTTTGGAAAAGGTTTATG+TGG 0.455518 2_2:+63129442 Msa0263590:CDS
AAATGAGAGGCTGCAGAAGC+AGG 0.455804 2_2:+63129765 Msa0263590:CDS
AGCCTGGTCCGGATTCGGTT+GGG 0.455928 2_2:+63130404 Msa0263590:intron
TTCTTCCTCTATGGAGCTTG+AGG 0.456568 2_2:-63128759 None:intergenic
TAGAATTTAATAAAATGAAG+TGG 0.456677 2_2:+63133891 Msa0263590:three_prime_UTR
GCACCAAGGGAGCATCTTCT+GGG 0.456872 2_2:-63132459 None:intergenic
GGTTTCAATGACGCTGTCAA+TGG 0.456971 2_2:+63131601 Msa0263590:CDS
GGGGATTTAAATCCTGCAAT+AGG 0.458859 2_2:-63133673 None:intergenic
TCCTGCAGACCGCTCTCAAA+AGG 0.460653 2_2:-63132755 None:intergenic
TTTGAGTGATGCAGCAGAAA+AGG 0.462084 2_2:-63131965 None:intergenic
ACAGATTGAAGCTTTGGAAA+AGG 0.463288 2_2:+63129433 Msa0263590:CDS
CCATGGCACGTCAGTATGTC+CGG 0.463423 2_2:+63132789 Msa0263590:CDS
TACACTACAAATTTGGAAAA+CGG 0.463495 2_2:+63130852 Msa0263590:CDS
TGTTAGTTTAGAACCTACTA+AGG 0.469404 2_2:+63130480 Msa0263590:CDS
AACCTCGTAGACCTCATTCC+AGG 0.475028 2_2:-63132006 None:intergenic
GAAACAGTGGGAATAAAGTC+AGG 0.476275 2_2:-63128556 None:intergenic
TTCATCTTTGCTAACCAGGC+TGG 0.476545 2_2:+63133264 Msa0263590:CDS
GGGATATTTGCCATTTCTCA+AGG 0.476954 2_2:+63130424 Msa0263590:CDS
CTGGTTAGCAAAGATGAATA+CGG 0.477103 2_2:-63133259 None:intergenic
AGCTGCCTCACAGTTTGCGA+GGG 0.478943 2_2:+63131021 Msa0263590:CDS
ACAGCTGATTCGGGAGTGCC+CGG 0.479031 2_2:+63129496 Msa0263590:CDS
GGTCCAGATGCCTGGGATGA+AGG 0.479652 2_2:+63130250 Msa0263590:CDS
GAGGGAGCATCGCTCGGAGT+GGG 0.480911 2_2:+63131924 Msa0263590:CDS
GCTCTATGAATCGTCGCAAA+TGG 0.481115 2_2:+63131250 Msa0263590:CDS
CATCTTGAGCAAGACCTTCA+AGG 0.481464 2_2:-63132231 None:intergenic
CATATTTGCCAGACGAATCA+AGG 0.481482 2_2:-63129394 None:intergenic
ATTTGAGATTAGGAAGAAGA+TGG 0.482110 2_2:+63129325 Msa0263590:exon
CCCTAAAATAAAACCAAAAG+AGG 0.482490 2_2:-63129281 None:intergenic
AGGAGTGAAAGGGAACTTGC+TGG 0.482905 2_2:-63131721 None:intergenic
CAACTGGTTGAGAATTCAAC+AGG 0.483215 2_2:-63132501 None:intergenic
GTTTGTGAAAGGTCACTGTC+TGG 0.483493 2_2:+63130974 Msa0263590:CDS
CGTATTCATCTTTGCTAACC+AGG 0.483530 2_2:+63133260 Msa0263590:CDS
CAGCTGCCTCACAGTTTGCG+AGG 0.484030 2_2:+63131020 Msa0263590:CDS
AAGAAGTACTTAAGTTAAAA+GGG 0.484220 2_2:+63128780 Msa0263590:five_prime_UTR
TCTGCTGCATCACTCAAAGC+TGG 0.485761 2_2:+63131970 Msa0263590:CDS
TTCTCAATGAACTAGGCTTA+GGG 0.486895 2_2:-63129469 None:intergenic
TGTTGCCTTCTCAATGAACT+AGG 0.487411 2_2:-63129476 None:intergenic
ATTGTTCCTCCATTTCCAGC+TGG 0.487699 2_2:-63130682 None:intergenic
CAATTCCTCCAAGGAGTGAA+AGG 0.489942 2_2:-63131732 None:intergenic
TTGTTCCTCCATTTCCAGCT+GGG 0.490051 2_2:-63130681 None:intergenic
CTTTCTGAGGGAGCATCGCT+CGG 0.490804 2_2:+63131918 Msa0263590:CDS
GACAATCACGATACCAAGTT+GGG 0.492005 2_2:-63130633 None:intergenic
AGAATTTAATAAAATGAAGT+GGG 0.492246 2_2:+63133892 Msa0263590:three_prime_UTR
GCTCCAAATGCTGACGGTAG+TGG 0.492798 2_2:+63130008 Msa0263590:CDS
GGTTTGCTTGTATGCCAGCT+GGG 0.493869 2_2:+63133527 Msa0263590:CDS
GAGTTCCTTTCAAAGGCTAC+AGG 0.495421 2_2:+63130212 Msa0263590:CDS
AACAACTCTAGTGGCTCTAC+AGG 0.497254 2_2:+63133302 Msa0263590:CDS
AGAGATGCTAATAGCCCTGC+TGG 0.498973 2_2:+63130068 Msa0263590:CDS
TAGCCTGGTCCGGATTCGGT+TGG 0.499456 2_2:+63130403 Msa0263590:intron
CATTGAGCCTAAGCAGATCA+AGG 0.500320 2_2:+63129529 Msa0263590:CDS
CTACAGGAACTGCTGTCGAT+TGG 0.500801 2_2:+63130228 Msa0263590:CDS
GAGAGACACCTTGATTCGTC+TGG 0.501967 2_2:+63129386 Msa0263590:CDS
ATCTGGTCTTGAAGTAAGCC+AGG 0.503745 2_2:+63132661 Msa0263590:CDS
ATCCCAACCGAATCCGGACC+AGG 0.504673 2_2:-63130406 None:intergenic
GAACTTCAAAATTACCCAGC+AGG 0.508005 2_2:-63130083 None:intergenic
GCCATTTCTCAAGGTGGCAA+CGG 0.511290 2_2:+63130433 Msa0263590:CDS
TGGTCTGTTCTGAACTGTGA+TGG 0.511447 2_2:+63131640 Msa0263590:CDS
CACTTTGGAAGGTTTGTGAA+AGG 0.517480 2_2:+63130963 Msa0263590:intron
CCAGAAGTGTTAACGCTGGA+TGG 0.519643 2_2:-63132854 None:intergenic
GTTCCCAGAAGATGCTCCCT+TGG 0.524999 2_2:+63132456 Msa0263590:CDS
ATCAATTGCGGAGGAGACAT+TGG 0.525084 2_2:+63130187 Msa0263590:CDS
GCAGGATAATGTTGCAGCCA+TGG 0.526267 2_2:+63132772 Msa0263590:CDS
TCTGAAAGCAGTCATTATCT+GGG 0.529270 2_2:+63133028 Msa0263590:intron
CGACAATCACGATACCAAGT+TGG 0.529574 2_2:-63130634 None:intergenic
CAACTTGGTATCGTGATTGT+CGG 0.529939 2_2:+63130635 Msa0263590:CDS
GCAGAAGCAGGTTTCACAGC+TGG 0.531459 2_2:+63129777 Msa0263590:CDS
AGGTTTGGTTTCAGAATAGG+AGG 0.531854 2_2:+63129549 Msa0263590:CDS
TCTTGAACAAGCTTAGCTTA+GGG 0.532616 2_2:+63128649 Msa0263590:five_prime_UTR
GGTCGAATCAAGTAGCCACT+AGG 0.534816 2_2:-63131055 None:intergenic
TTCTAAACTAACAAGACCAC+AGG 0.536240 2_2:-63130470 None:intergenic
AATCAAGCAATCATGCCTCT+TGG 0.536445 2_2:+63132036 Msa0263590:CDS
AAGCACTTACACTAGCTCAA+TGG 0.536805 2_2:+63132906 Msa0263590:CDS
ATTGGCAGAGTTCCTTTCAA+AGG 0.541184 2_2:+63130205 Msa0263590:CDS
TTCTTCCTCAAGCTCCATAG+AGG 0.541627 2_2:+63128754 Msa0263590:five_prime_UTR
CCAGGCTGGCCTTGACATGT+TGG 0.541782 2_2:+63133278 Msa0263590:CDS
TCTTAAAAGATCGCCCAACT+TGG 0.542742 2_2:+63130620 Msa0263590:CDS
ATGAGGTCTACGAGGTTCAC+CGG 0.543253 2_2:+63132012 Msa0263590:CDS
GTTGACATGCAGATCCCAGC+TGG 0.543937 2_2:-63133541 None:intergenic
GTCAATGGATTCAATGATGA+TGG 0.544773 2_2:+63131616 Msa0263590:CDS
AGTTCCCTTTCACTCCTTGG+AGG 0.547829 2_2:+63131727 Msa0263590:CDS
GGTGGAGCAAAACTCTCCCC+TGG 0.550796 2_2:+63132875 Msa0263590:CDS
CGGAAACCAGAAGGCACCAA+GGG 0.551319 2_2:-63132472 None:intergenic
CAGTTCCTGTAGCCTTTGAA+AGG 0.551448 2_2:-63130217 None:intergenic
CTCAGACCTGCAGGTTTAGG+TGG 0.551972 2_2:-63131114 None:intergenic
CCAACATGTCAAGGCCAGCC+TGG 0.554158 2_2:-63133278 None:intergenic
GCACACTTTACCTATAGCTC+TGG 0.555699 2_2:-63132934 None:intergenic
TGGGATCTGCATGTCAACAA+TGG 0.558119 2_2:+63133546 Msa0263590:CDS
TCGATTGGGTCCAGATGCCT+GGG 0.561065 2_2:+63130243 Msa0263590:CDS
AGAAAGCGAACTAAAACAGC+AGG 0.564715 2_2:-63131901 None:intergenic
AATTCCTCCAAGGAGTGAAA+GGG 0.566854 2_2:-63131731 None:intergenic
TCTGAACTGTGATGGTGCCG+AGG 0.568521 2_2:+63131648 Msa0263590:CDS
TTGCAGATTCCTATCAATTG+CGG 0.571465 2_2:+63130175 Msa0263590:intron
AGTACTTAAGTTAAAAGGGT+CGG 0.571938 2_2:+63128784 Msa0263590:five_prime_UTR
CGACGTACCTGCTCAACCGT+TGG 0.573623 2_2:-63131480 None:intergenic
TCAAGAAACAAGTGGTGAAG+TGG 0.576595 2_2:+63131414 Msa0263590:CDS
GCTCAATGTTGGCCAAAACC+GGG 0.577313 2_2:-63129514 None:intergenic
TGAGGGAGCATCGCTCGGAG+TGG 0.578290 2_2:+63131923 Msa0263590:CDS
TGGTTAGCAAAGATGAATAC+GGG 0.580621 2_2:-63133258 None:intergenic
AATTCAATCAAGAATTTGAG+TGG 0.580677 2_2:+63131688 Msa0263590:CDS
AACAGCAGCAAATCGAACCT+TGG 0.582279 2_2:+63132631 Msa0263590:CDS
CAGGCAACAGCTCATGCTAA+CGG 0.583410 2_2:+63132680 Msa0263590:CDS
GGAGTGGCAGCTCGAGCCTG+TGG 0.583765 2_2:+63130454 Msa0263590:CDS
GATCTGCTTAGGCTCAATGT+TGG 0.585016 2_2:-63129525 None:intergenic
ATGGATTCAATGATGATGGC+TGG 0.585896 2_2:+63131620 Msa0263590:CDS
ATTCGACCATGTGAAGGTGG+AGG 0.587006 2_2:+63131070 Msa0263590:CDS
AACTTCAAAATTACCCAGCA+GGG 0.589166 2_2:-63130082 None:intergenic
TAGGGAGAAGCAGAGAAAAG+AGG 0.589529 2_2:+63129681 Msa0263590:CDS
GAGTTGTTTCCAACATGTCA+AGG 0.591719 2_2:-63133287 None:intergenic
GTGATCTGAGCTGAAACAGT+GGG 0.593949 2_2:-63128568 None:intergenic
TGTAGACCACCTAAACCTGC+AGG 0.594819 2_2:+63131108 Msa0263590:CDS
AGTGATCTGAGCTGAAACAG+TGG 0.595907 2_2:-63128569 None:intergenic
AAGACCAGATGTCAAATCCA+AGG 0.596011 2_2:-63132648 None:intergenic
GTCAGCATTTGGAGCTGCTG+GGG 0.596788 2_2:-63130000 None:intergenic
TGTTCAATTGTATGTCCAAG+AGG 0.596874 2_2:-63132051 None:intergenic
GCGAACTAAAACAGCAGGAG+TGG 0.597135 2_2:-63131896 None:intergenic
CATATGATCAAGCCGTCGCG+TGG 0.597983 2_2:+63133581 Msa0263590:CDS
CACTGAAATAGTAACACCCT+CGG 0.598397 2_2:-63131665 None:intergenic
TCCAGCGTTAACACTTCTGG+TGG 0.599839 2_2:+63132857 Msa0263590:CDS
CCGGACATACTGACGTGCCA+TGG 0.600199 2_2:-63132789 None:intergenic
CTAAGCCTAGTTCATTGAGA+AGG 0.603333 2_2:+63129471 Msa0263590:CDS
GATTAGGAAGAAGATGGCTA+TGG 0.605721 2_2:+63129331 Msa0263590:exon
CTGAACTGTGATGGTGCCGA+GGG 0.608315 2_2:+63131649 Msa0263590:CDS
AATTGAACTTGTTTACACAC+AGG 0.608400 2_2:+63130702 Msa0263590:CDS
GTCGAATCAAGTAGCCACTA+GGG 0.608609 2_2:-63131054 None:intergenic
TTGCACAGACAATTCCTCCA+AGG 0.608666 2_2:-63131741 None:intergenic
ATGTTCCCAGCTGGAAATGG+AGG 0.609193 2_2:+63130676 Msa0263590:CDS
GGAATTGATGAGAATGCTGT+GGG 0.610922 2_2:+63132394 Msa0263590:CDS
GCGGAAACCAGAAGGCACCA+AGG 0.611214 2_2:-63132473 None:intergenic
TGATTCTCTACCTTCATCCC+AGG 0.611915 2_2:-63130260 None:intergenic
AATTGGAGCAAATATGAGCT+CGG 0.611962 2_2:-63132425 None:intergenic
CCTATGGCTATCCTGGAATG+AGG 0.613041 2_2:+63131995 Msa0263590:CDS
ATATGCTACTGAAACATTTG+TGG 0.613265 2_2:+63133086 Msa0263590:CDS
CCTCATTCCAGGATAGCCAT+AGG 0.613471 2_2:-63131995 None:intergenic
TTTGGAAAACGGCAGTGTTG+TGG 0.614841 2_2:+63130863 Msa0263590:CDS
CAGATTCCTATCAATTGCGG+AGG 0.615563 2_2:+63130178 Msa0263590:intron
ATAAACACAAACCTTATTTG+GGG 0.620329 2_2:+63129192 Msa0263590:five_prime_UTR
TTGATTCGACCATGTGAAGG+TGG 0.621938 2_2:+63131067 Msa0263590:CDS
GAATTTAATAAAATGAAGTG+GGG 0.626018 2_2:+63133893 Msa0263590:three_prime_UTR
AGGACAATGCGGAAACCAGA+AGG 0.626123 2_2:-63132481 None:intergenic
ACATACAATTGAACATGAAG+AGG 0.627020 2_2:+63132059 Msa0263590:CDS
AAGTGGTGTATAGCATGGGT+CGG 0.629287 2_2:+63131431 Msa0263590:CDS
GACATATGCTCCAATGACGC+TGG 0.629499 2_2:+63130800 Msa0263590:intron
CTGAAAGCAGTCATTATCTG+GGG 0.631210 2_2:+63133029 Msa0263590:intron
TAAGTGCTTCTGGAGTGCCA+GGG 0.631518 2_2:-63132892 None:intergenic
AATTGATGAGAATGCTGTGG+GGG 0.634959 2_2:+63132396 Msa0263590:CDS
ATTGATCCTCCACCTTCACA+TGG 0.635822 2_2:-63131076 None:intergenic
TGGTGAAGTGGTGTATAGCA+TGG 0.636847 2_2:+63131426 Msa0263590:CDS
AAGTGCTTCTGGAGTGCCAG+GGG 0.637051 2_2:-63132891 None:intergenic
TTCTCAAGGTGGCAACGGAG+TGG 0.637931 2_2:+63130438 Msa0263590:CDS
GCTGCCTCACAGTTTGCGAG+GGG 0.640346 2_2:+63131022 Msa0263590:CDS
GGCTCTACAGGATATCACAC+TGG 0.641498 2_2:+63133314 Msa0263590:CDS
CGGTAGTGGCGTTGATTCTG+CGG 0.643778 2_2:+63130022 Msa0263590:CDS
CATGTTGGAAACAACTCTAG+TGG 0.653127 2_2:+63133293 Msa0263590:CDS
GCTCTCAAAAGGAAACTGGA+AGG 0.655094 2_2:-63132744 None:intergenic
GAGATGCTAATAGCCCTGCT+GGG 0.656369 2_2:+63130069 Msa0263590:CDS
TACTTGATTCGACCATGTGA+AGG 0.657308 2_2:+63131064 Msa0263590:CDS
TGGAATTGATGAGAATGCTG+TGG 0.658575 2_2:+63132393 Msa0263590:CDS
GGTGAAGTGGTGTATAGCAT+GGG 0.661299 2_2:+63131427 Msa0263590:CDS
ATATTTGCCATTTCTCAAGG+TGG 0.661399 2_2:+63130427 Msa0263590:CDS
CAAGTAGCTCAAGAAACAAG+TGG 0.662122 2_2:+63131406 Msa0263590:CDS
AGCATGCACTTTCCACGCGA+CGG 0.663627 2_2:-63133593 None:intergenic
AGCTCAGAGATTGACAATTG+CGG 0.667204 2_2:+63131274 Msa0263590:CDS
AGGGGTGAAATGCTCCCTAG+TGG 0.669242 2_2:+63131040 Msa0263590:CDS
AACCAAACCTTGATCTGCTT+AGG 0.671065 2_2:-63129536 None:intergenic
AAACAGTGGGAATAAAGTCA+GGG 0.676082 2_2:-63128555 None:intergenic
GGAGTGTGCCAGAAGTGCTG+CGG 0.679106 2_2:+63131225 Msa0263590:CDS
ATTCGTCTGGCAAATATGTG+CGG 0.682465 2_2:+63129399 Msa0263590:CDS
TCCACCAGAAGTGTTAACGC+TGG 0.686791 2_2:-63132858 None:intergenic
ATTTGCGACGATTCATAGAG+CGG 0.688818 2_2:-63131248 None:intergenic
TGAAAGCAGTCATTATCTGG+GGG 0.689197 2_2:+63133030 Msa0263590:intron
CCAGCAGCTCCAAATGCTGA+CGG 0.689268 2_2:+63130002 Msa0263590:CDS
GTCATTAGAAACAAACAACA+AGG 0.690599 2_2:+63128442 Msa0263590:five_prime_UTR
TTCACCCCTCGCAAACTGTG+AGG 0.692443 2_2:-63131026 None:intergenic
GAGAATTCAACAGGACAATG+CGG 0.705796 2_2:-63132492 None:intergenic
GATGAATAAGCTGTTGATGG+AGG 0.710323 2_2:+63129741 Msa0263590:CDS
ATCCTGGAATGAGGTCTACG+AGG 0.714524 2_2:+63132004 Msa0263590:CDS
GAATTGATGAGAATGCTGTG+GGG 0.719666 2_2:+63132395 Msa0263590:CDS
TGTTGATGGAGGAAAATGAG+AGG 0.721292 2_2:+63129752 Msa0263590:CDS
GGTTTAGGTGGTCTACAATG+TGG 0.731869 2_2:-63131102 None:intergenic
GGATCTGCATGTCAACAATG+GGG 0.742598 2_2:+63133548 Msa0263590:CDS
CTTGAGCAAGACCTTCAAGG+CGG 0.775739 2_2:-63132228 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAACAGTTTTTTTTT+TGG - chr2_2:63128910-63128929 None:intergenic 10.0%
!!! AATTTTTACGACTTTTTTTA+TGG + chr2_2:63128818-63128837 Msa0263590:five_prime_UTR 15.0%
!! AAATTCAAAACAAAAACAAA+GGG - chr2_2:63129594-63129613 None:intergenic 15.0%
!!! TTCATTTTCATTCATTATTA+TGG + chr2_2:63129854-63129873 Msa0263590:intron 15.0%
!! GATTTAATATAATTTCACTT+TGG + chr2_2:63130948-63130967 Msa0263590:intron 15.0%
!! AAAGAAAATAAGAATATAGT+AGG - chr2_2:63131162-63131181 None:intergenic 15.0%
!! ACTAAATGTAAAATTATAGA+AGG - chr2_2:63131826-63131845 None:intergenic 15.0%
!! TAGAATTTAATAAAATGAAG+TGG + chr2_2:63133891-63133910 Msa0263590:three_prime_UTR 15.0%
!! AGAATTTAATAAAATGAAGT+GGG + chr2_2:63133892-63133911 Msa0263590:three_prime_UTR 15.0%
!!! AAGAAGTACTTAAGTTAAAA+GGG + chr2_2:63128780-63128799 Msa0263590:five_prime_UTR 20.0%
!!! TTTTTTTATGGCTTTTACAT+TGG + chr2_2:63128830-63128849 Msa0263590:five_prime_UTR 20.0%
!!! TTTTTTATGGCTTTTACATT+GGG + chr2_2:63128831-63128850 Msa0263590:five_prime_UTR 20.0%
!!! TTTTTTTGTCTCAAAAAAAC+CGG - chr2_2:63128965-63128984 None:intergenic 20.0%
!!! ATAAAAAGTAACGGTTTTTA+AGG + chr2_2:63129025-63129044 Msa0263590:five_prime_UTR 20.0%
!!! TATAAACACAAACCTTATTT+GGG + chr2_2:63129191-63129210 Msa0263590:five_prime_UTR 20.0%
!!! AAGGTTTTTAATTTGAGATT+AGG + chr2_2:63129315-63129334 Msa0263590:five_prime_UTR 20.0%
!! CAAATTCAAAACAAAAACAA+AGG - chr2_2:63129595-63129614 None:intergenic 20.0%
!! AATGAAAATGAACAATGATA+GGG - chr2_2:63129846-63129865 None:intergenic 20.0%
!! TAATTGTCATTGTTTGATTA+AGG + chr2_2:63129898-63129917 Msa0263590:intron 20.0%
!! TGAAAAATTTCAATAGATTG+TGG + chr2_2:63130594-63130613 Msa0263590:intron 20.0%
!! GCTCAATAAATGATAAATAA+AGG - chr2_2:63130752-63130771 None:intergenic 20.0%
!! TAATATAATTTCACTTTGGA+AGG + chr2_2:63130952-63130971 Msa0263590:intron 20.0%
!!! CATGATTAATATTTTCTTCT+AGG + chr2_2:63131199-63131218 Msa0263590:intron 20.0%
!! TTTATGTACTTTCTATGATT+TGG + chr2_2:63132163-63132182 Msa0263590:intron 20.0%
!! AGTTACATTAAAATCTTTGA+AGG - chr2_2:63133208-63133227 None:intergenic 20.0%
!!! TGTTGTTTAAAACAAATTTG+AGG - chr2_2:63133452-63133471 None:intergenic 20.0%
!!! TTTACAAGATCAAATCATTT+TGG - chr2_2:63133858-63133877 None:intergenic 20.0%
!! GAATTTAATAAAATGAAGTG+GGG + chr2_2:63133893-63133912 Msa0263590:three_prime_UTR 20.0%
!!! AAATGAAGTTTTGAACTAGT+TGG - chr2_2:63128710-63128729 None:intergenic 25.0%
!!! GAAGAAGTACTTAAGTTAAA+AGG + chr2_2:63128779-63128798 Msa0263590:five_prime_UTR 25.0%
!!! TACGCGTTTTTCTTTTATTT+GGG - chr2_2:63128863-63128882 None:intergenic 25.0%
!! TTACGCGTTTTTCTTTTATT+TGG - chr2_2:63128864-63128883 None:intergenic 25.0%
!!! AACAGTTTTTTTTTTGGACT+TGG - chr2_2:63128904-63128923 None:intergenic 25.0%
! ATAAGACAGCAAAAAAATTC+CGG + chr2_2:63128943-63128962 Msa0263590:five_prime_UTR 25.0%
!!! TTACTTTTTATTTCCTCTTC+TGG - chr2_2:63129016-63129035 None:intergenic 25.0%
! GAAGAGGAAATAAAAAGTAA+CGG + chr2_2:63129016-63129035 Msa0263590:five_prime_UTR 25.0%
!!! TTTTTAAGGTTGTATGAACA+AGG + chr2_2:63129039-63129058 Msa0263590:five_prime_UTR 25.0%
! CTATAAACACAAACCTTATT+TGG + chr2_2:63129190-63129209 Msa0263590:five_prime_UTR 25.0%
!! ATAAACACAAACCTTATTTG+GGG + chr2_2:63129192-63129211 Msa0263590:five_prime_UTR 25.0%
!!! CCTCTTTTGGTTTTATTTTA+GGG + chr2_2:63129281-63129300 Msa0263590:five_prime_UTR 25.0%
! GAATGAAAATGAACAATGAT+AGG - chr2_2:63129847-63129866 None:intergenic 25.0%
! ATATTGTGATGATTATGACA+TGG + chr2_2:63130323-63130342 Msa0263590:intron 25.0%
! GTAAATATAGTATGAGACAT+TGG - chr2_2:63130366-63130385 None:intergenic 25.0%
! ACCTACTAAGGTAATTAAAA+AGG + chr2_2:63130492-63130511 Msa0263590:intron 25.0%
! CCTACTAAGGTAATTAAAAA+GGG + chr2_2:63130493-63130512 Msa0263590:intron 25.0%
! CTACTAAGGTAATTAAAAAG+GGG + chr2_2:63130494-63130513 Msa0263590:intron 25.0%
!! TCTAAGATACACTACAAATT+TGG + chr2_2:63130845-63130864 Msa0263590:CDS 25.0%
! TACACTACAAATTTGGAAAA+CGG + chr2_2:63130852-63130871 Msa0263590:CDS 25.0%
!! TTAATATTTTCTTCTAGGCA+TGG + chr2_2:63131204-63131223 Msa0263590:intron 25.0%
! GTATTATTAATTCACGATGT+AGG + chr2_2:63131310-63131329 Msa0263590:intron 25.0%
! AATTCAATCAAGAATTTGAG+TGG + chr2_2:63131688-63131707 Msa0263590:CDS 25.0%
!!! AAGATGATTCTTTTGTTTCT+AGG + chr2_2:63132248-63132267 Msa0263590:CDS 25.0%
!!! AGATGATTCTTTTGTTTCTA+GGG + chr2_2:63132249-63132268 Msa0263590:CDS 25.0%
! AAGTAAACAAACCATAACAA+GGG - chr2_2:63132304-63132323 None:intergenic 25.0%
! TTGTTTACTTGCATGTTTAT+TGG + chr2_2:63132314-63132333 Msa0263590:intron 25.0%
!!! GTATTTGATTTTTCTCTAAC+CGG + chr2_2:63132538-63132557 Msa0263590:intron 25.0%
! TACTATGCTTCATATATGAA+CGG - chr2_2:63132566-63132585 None:intergenic 25.0%
!!! AATTGTTGCATGCATTTTTT+TGG + chr2_2:63133498-63133517 Msa0263590:intron 25.0%
!!! TGTTTTTGTATTCAACATGT+GGG - chr2_2:63133710-63133729 None:intergenic 25.0%
!!! TTGTTTTTGTATTCAACATG+TGG - chr2_2:63133711-63133730 None:intergenic 25.0%
! ACATGTTGAATACAAAAACA+AGG + chr2_2:63133710-63133729 Msa0263590:three_prime_UTR 25.0%
! CATGTTGAATACAAAAACAA+GGG + chr2_2:63133711-63133730 Msa0263590:three_prime_UTR 25.0%
!!! TTGGATTAGTTTTGTTACTT+TGG + chr2_2:63133824-63133843 Msa0263590:three_prime_UTR 25.0%
GTCATTAGAAACAAACAACA+AGG + chr2_2:63128442-63128461 Msa0263590:five_prime_UTR 30.0%
AGTACTTAAGTTAAAAGGGT+CGG + chr2_2:63128784-63128803 Msa0263590:five_prime_UTR 30.0%
!!! GCCTCTTTTGGTTTTATTTT+AGG + chr2_2:63129280-63129299 Msa0263590:five_prime_UTR 30.0%
CCCTAAAATAAAACCAAAAG+AGG - chr2_2:63129284-63129303 None:intergenic 30.0%
!!! TTTTAGGGTGTGATTGTTTA+AGG + chr2_2:63129296-63129315 Msa0263590:five_prime_UTR 30.0%
! ATTTGAGATTAGGAAGAAGA+TGG + chr2_2:63129325-63129344 Msa0263590:exon 30.0%
! TTGTGTTGTGTGAAAAGTTT+TGG + chr2_2:63129612-63129631 Msa0263590:intron 30.0%
! TGTGTTGTGTGAAAAGTTTT+GGG + chr2_2:63129613-63129632 Msa0263590:intron 30.0%
!! TTTAGTTGCGATTTGATTTG+TGG + chr2_2:63129639-63129658 Msa0263590:intron 30.0%
!!! GATTTGATTTGTGGCTTTTT+TGG + chr2_2:63129648-63129667 Msa0263590:intron 30.0%
AATATAGTATGAGACATTGG+TGG - chr2_2:63130363-63130382 None:intergenic 30.0%
! TGTTAGTTTAGAACCTACTA+AGG + chr2_2:63130480-63130499 Msa0263590:CDS 30.0%
!! CCCTTTTTAATTACCTTAGT+AGG - chr2_2:63130496-63130515 None:intergenic 30.0%
GTAATTAAAAAGGGGACATA+TGG + chr2_2:63130502-63130521 Msa0263590:intron 30.0%
! AATTGAACTTGTTTACACAC+AGG + chr2_2:63130702-63130721 Msa0263590:CDS 30.0%
GACTAATGTGATCAATACTA+TGG + chr2_2:63131354-63131373 Msa0263590:intron 30.0%
! TTCTTAGAACTTTTAGCCAA+CGG + chr2_2:63131464-63131483 Msa0263590:CDS 30.0%
TTTAAACATCATTCTTGCAG+AGG + chr2_2:63131580-63131599 Msa0263590:intron 30.0%
TAGTTCTTCTAATCGTTACA+CGG + chr2_2:63131842-63131861 Msa0263590:intron 30.0%
ACATACAATTGAACATGAAG+AGG + chr2_2:63132059-63132078 Msa0263590:CDS 30.0%
ATCATAAAAAGACATGGTCA+AGG - chr2_2:63132109-63132128 None:intergenic 30.0%
! TTGACCATGTCTTTTTATGA+TGG + chr2_2:63132108-63132127 Msa0263590:intron 30.0%
TCTACCATCATAAAAAGACA+TGG - chr2_2:63132115-63132134 None:intergenic 30.0%
!! ATTTGCTTTTGGCTAAGATT+TGG + chr2_2:63132140-63132159 Msa0263590:intron 30.0%
CAAGTAAACAAACCATAACA+AGG - chr2_2:63132305-63132324 None:intergenic 30.0%
! AACTGTTCAAATGATGATGA+TGG - chr2_2:63132367-63132386 None:intergenic 30.0%
TCATTTGAACAGTTATGTAC+TGG + chr2_2:63132373-63132392 Msa0263590:intron 30.0%
ATATGCTACTGAAACATTTG+TGG + chr2_2:63133086-63133105 Msa0263590:CDS 30.0%
! TATTTTATGCTGCTCTTTGA+AGG + chr2_2:63133123-63133142 Msa0263590:CDS 30.0%
! TATGTCCATGATCTCATTTT+AGG + chr2_2:63133146-63133165 Msa0263590:intron 30.0%
! ATGTCCATGATCTCATTTTA+GGG + chr2_2:63133147-63133166 Msa0263590:intron 30.0%
!!! TTTTAGGGTACAATTGAATC+TGG + chr2_2:63133162-63133181 Msa0263590:intron 30.0%
TCATTTATATGACCTATTGC+AGG + chr2_2:63133661-63133680 Msa0263590:exon 30.0%
ACATGTGGGAAAAAAAAAGT+GGG - chr2_2:63133696-63133715 None:intergenic 30.0%
AACATGTGGGAAAAAAAAAG+TGG - chr2_2:63133697-63133716 None:intergenic 30.0%
! AATCAGGATAGAATTTTGAG+AGG + chr2_2:63133737-63133756 Msa0263590:three_prime_UTR 30.0%
!! ATCAGGATAGAATTTTGAGA+GGG + chr2_2:63133738-63133757 Msa0263590:three_prime_UTR 30.0%
! CATGTTTGGATCATTTTCAT+TGG + chr2_2:63133805-63133824 Msa0263590:three_prime_UTR 30.0%
AAACAGTGGGAATAAAGTCA+GGG - chr2_2:63128558-63128577 None:intergenic 35.0%
TTCTTGAACAAGCTTAGCTT+AGG + chr2_2:63128648-63128667 Msa0263590:five_prime_UTR 35.0%
TCTTGAACAAGCTTAGCTTA+GGG + chr2_2:63128649-63128668 Msa0263590:five_prime_UTR 35.0%
AAGTACTTCTTCTTCCTCTA+TGG - chr2_2:63128771-63128790 None:intergenic 35.0%
! AAAAAAACATTTGCTGCCAC+TGG + chr2_2:63128978-63128997 Msa0263590:five_prime_UTR 35.0%
!! GTTTTGTTGAAAACCAGAAG+AGG + chr2_2:63129000-63129019 Msa0263590:five_prime_UTR 35.0%
GGATTTCATGTTTCACTAGT+TGG + chr2_2:63129060-63129079 Msa0263590:five_prime_UTR 35.0%
GTTTCACTAGTTGGAACTAT+TGG + chr2_2:63129069-63129088 Msa0263590:five_prime_UTR 35.0%
! TTGTGTTGTATTGCCTCTTT+TGG + chr2_2:63129268-63129287 Msa0263590:intron 35.0%
!! ACAGATTGAAGCTTTGGAAA+AGG + chr2_2:63129433-63129452 Msa0263590:CDS 35.0%
!! AGCTTTGGAAAAGGTTTATG+TGG + chr2_2:63129442-63129461 Msa0263590:CDS 35.0%
TTCTCAATGAACTAGGCTTA+GGG - chr2_2:63129472-63129491 None:intergenic 35.0%
! TCAAGGTTTGGTTTCAGAAT+AGG + chr2_2:63129546-63129565 Msa0263590:CDS 35.0%
!!! TTTTTTGGTTTGCAGGTGTA+GGG + chr2_2:63129663-63129682 Msa0263590:intron 35.0%
GCATCTCTCAATGAATTCAT+AGG - chr2_2:63130056-63130075 None:intergenic 35.0%
AACTTCAAAATTACCCAGCA+GGG - chr2_2:63130085-63130104 None:intergenic 35.0%
TTGCAGATTCCTATCAATTG+CGG + chr2_2:63130175-63130194 Msa0263590:intron 35.0%
TTGTGATGATTATGACATGG+AGG + chr2_2:63130326-63130345 Msa0263590:intron 35.0%
! ATATTTGCCATTTCTCAAGG+TGG + chr2_2:63130427-63130446 Msa0263590:CDS 35.0%
TTCTAAACTAACAAGACCAC+AGG - chr2_2:63130473-63130492 None:intergenic 35.0%
TTAAAAAGGGGACATATGGA+TGG + chr2_2:63130506-63130525 Msa0263590:intron 35.0%
GTGAAGAATCAAACGTGAAT+AGG + chr2_2:63130724-63130743 Msa0263590:intron 35.0%
! AATGCATTGCTATTGTTGCA+TGG + chr2_2:63130904-63130923 Msa0263590:intron 35.0%
! ATGCATTGCTATTGTTGCAT+GGG + chr2_2:63130905-63130924 Msa0263590:intron 35.0%
! ATAGTAGGCATTCTAGCTAA+TGG - chr2_2:63131147-63131166 None:intergenic 35.0%
TAGGATTCTATTGCAAGCTT+TGG + chr2_2:63131329-63131348 Msa0263590:intron 35.0%
!! CTAAAAGTTCTAAGAACTGC+AGG - chr2_2:63131460-63131479 None:intergenic 35.0%
! GTCAATGGATTCAATGATGA+TGG + chr2_2:63131616-63131635 Msa0263590:CDS 35.0%
! AATGGATTTACGCACTTACT+TGG - chr2_2:63131783-63131802 None:intergenic 35.0%
AAGTAAGTGCGTAAATCCAT+TGG + chr2_2:63131782-63131801 Msa0263590:intron 35.0%
!!! TGTTTTAGTTCGCTTTCTGA+GGG + chr2_2:63131906-63131925 Msa0263590:CDS 35.0%
TGTTCAATTGTATGTCCAAG+AGG - chr2_2:63132054-63132073 None:intergenic 35.0%
! GGTAGATGCATATTTGCTTT+TGG + chr2_2:63132129-63132148 Msa0263590:intron 35.0%
AATTGGAGCAAATATGAGCT+CGG - chr2_2:63132428-63132447 None:intergenic 35.0%
TTGACGTCATATTGTGTTTC+AGG + chr2_2:63132592-63132611 Msa0263590:intron 35.0%
TGACGTCATATTGTGTTTCA+GGG + chr2_2:63132593-63132612 Msa0263590:intron 35.0%
GACAAGAGATATAGAAAGAG+AGG - chr2_2:63133010-63133029 None:intergenic 35.0%
TCTGAAAGCAGTCATTATCT+GGG + chr2_2:63133028-63133047 Msa0263590:intron 35.0%
CTGAGATCTGATTCTCTTAT+TGG + chr2_2:63133061-63133080 Msa0263590:CDS 35.0%
TGTACCCTAAAATGAGATCA+TGG - chr2_2:63133154-63133173 None:intergenic 35.0%
TGTAACTTCTCTATCCTGTT+TGG + chr2_2:63133221-63133240 Msa0263590:intron 35.0%
TGGTTAGCAAAGATGAATAC+GGG - chr2_2:63133261-63133280 None:intergenic 35.0%
CTGGTTAGCAAAGATGAATA+CGG - chr2_2:63133262-63133281 None:intergenic 35.0%
!!! TGCATGCATTTTTTTGGTTC+AGG + chr2_2:63133504-63133523 Msa0263590:intron 35.0%
!!! GCATGCATTTTTTTGGTTCA+GGG + chr2_2:63133505-63133524 Msa0263590:intron 35.0%
!!! CATGCATTTTTTTGGTTCAG+GGG + chr2_2:63133506-63133525 Msa0263590:intron 35.0%
TGGCTTTCTCGTTCATTAAT+TGG + chr2_2:63133638-63133657 Msa0263590:CDS 35.0%
CATGTGGGAAAAAAAAAGTG+GGG - chr2_2:63133695-63133714 None:intergenic 35.0%
! ACAAAAACAAGGGTACAATC+AGG + chr2_2:63133721-63133740 Msa0263590:three_prime_UTR 35.0%
GCACATTACAAGATCATGTT+TGG + chr2_2:63133791-63133810 Msa0263590:three_prime_UTR 35.0%
GAAACAGTGGGAATAAAGTC+AGG - chr2_2:63128559-63128578 None:intergenic 40.0%
!! CTGGTTTTCAACAAAACCAG+TGG - chr2_2:63128997-63129016 None:intergenic 40.0%
CACTCTTAAGACCCCAAATA+AGG - chr2_2:63129206-63129225 None:intergenic 40.0%
GATTAGGAAGAAGATGGCTA+TGG + chr2_2:63129331-63129350 Msa0263590:exon 40.0%
CATATTTGCCAGACGAATCA+AGG - chr2_2:63129397-63129416 None:intergenic 40.0%
ATTCGTCTGGCAAATATGTG+CGG + chr2_2:63129399-63129418 Msa0263590:CDS 40.0%
TGCTGAACAGATTGAAGCTT+TGG + chr2_2:63129427-63129446 Msa0263590:CDS 40.0%
CTTCTCAATGAACTAGGCTT+AGG - chr2_2:63129473-63129492 None:intergenic 40.0%
CTAAGCCTAGTTCATTGAGA+AGG + chr2_2:63129471-63129490 Msa0263590:CDS 40.0%
TGTTGCCTTCTCAATGAACT+AGG - chr2_2:63129479-63129498 None:intergenic 40.0%
AACCAAACCTTGATCTGCTT+AGG - chr2_2:63129539-63129558 None:intergenic 40.0%
! AGGTTTGGTTTCAGAATAGG+AGG + chr2_2:63129549-63129568 Msa0263590:CDS 40.0%
!!! TTGTGGCTTTTTTGGTTTGC+AGG + chr2_2:63129656-63129675 Msa0263590:intron 40.0%
!!! CTTTTTTGGTTTGCAGGTGT+AGG + chr2_2:63129662-63129681 Msa0263590:intron 40.0%
TGCGATGAATAAGCTGTTGA+TGG + chr2_2:63129738-63129757 Msa0263590:CDS 40.0%
! GATGAATAAGCTGTTGATGG+AGG + chr2_2:63129741-63129760 Msa0263590:CDS 40.0%
! TGTTGATGGAGGAAAATGAG+AGG + chr2_2:63129752-63129771 Msa0263590:CDS 40.0%
GGCTTACAATGTGTAATTGC+TGG - chr2_2:63129825-63129844 None:intergenic 40.0%
GAACTTCAAAATTACCCAGC+AGG - chr2_2:63130086-63130105 None:intergenic 40.0%
ATTGGCAGAGTTCCTTTCAA+AGG + chr2_2:63130205-63130224 Msa0263590:CDS 40.0%
GTAGAGAATCATGCTTCTAG+TGG + chr2_2:63130272-63130291 Msa0263590:intron 40.0%
! TCATGCTTCTAGTGGACAAT+TGG + chr2_2:63130280-63130299 Msa0263590:intron 40.0%
TAGTATGAGACATTGGTGGA+AGG - chr2_2:63130359-63130378 None:intergenic 40.0%
! TCAACCATTGTTTGTTAGCC+TGG + chr2_2:63130388-63130407 Msa0263590:intron 40.0%
! GGGATATTTGCCATTTCTCA+AGG + chr2_2:63130424-63130443 Msa0263590:CDS 40.0%
TCTTAAAAGATCGCCCAACT+TGG + chr2_2:63130620-63130639 Msa0263590:CDS 40.0%
GACAATCACGATACCAAGTT+GGG - chr2_2:63130636-63130655 None:intergenic 40.0%
CAACTTGGTATCGTGATTGT+CGG + chr2_2:63130635-63130654 Msa0263590:CDS 40.0%
! CACTTTGGAAGGTTTGTGAA+AGG + chr2_2:63130963-63130982 Msa0263590:intron 40.0%
! TACTTGATTCGACCATGTGA+AGG + chr2_2:63131064-63131083 Msa0263590:CDS 40.0%
ATTTGCGACGATTCATAGAG+CGG - chr2_2:63131251-63131270 None:intergenic 40.0%
AGCTCAGAGATTGACAATTG+CGG + chr2_2:63131274-63131293 Msa0263590:CDS 40.0%
! CAATACTATGGCTTTTGTGC+AGG + chr2_2:63131366-63131385 Msa0263590:intron 40.0%
CAAGTAGCTCAAGAAACAAG+TGG + chr2_2:63131406-63131425 Msa0263590:CDS 40.0%
TCAAGAAACAAGTGGTGAAG+TGG + chr2_2:63131414-63131433 Msa0263590:CDS 40.0%
TGCAAAAAGCAGGCTGAAAT+AGG - chr2_2:63131531-63131550 None:intergenic 40.0%
CAGATCATTCTGCAAAAAGC+AGG - chr2_2:63131541-63131560 None:intergenic 40.0%
TGCAGAATGATCTGTTGTGT+TGG + chr2_2:63131547-63131566 Msa0263590:intron 40.0%
!! ATGGATTCAATGATGATGGC+TGG + chr2_2:63131620-63131639 Msa0263590:CDS 40.0%
CACTGAAATAGTAACACCCT+CGG - chr2_2:63131668-63131687 None:intergenic 40.0%
AATTCCTCCAAGGAGTGAAA+GGG - chr2_2:63131734-63131753 None:intergenic 40.0%
AGAAAGCGAACTAAAACAGC+AGG - chr2_2:63131904-63131923 None:intergenic 40.0%
!!! CTGTTTTAGTTCGCTTTCTG+AGG + chr2_2:63131905-63131924 Msa0263590:CDS 40.0%
TTTGAGTGATGCAGCAGAAA+AGG - chr2_2:63131968-63131987 None:intergenic 40.0%
AATCAAGCAATCATGCCTCT+TGG + chr2_2:63132036-63132055 Msa0263590:CDS 40.0%
CTAGAAATTATCCGCCTTGA+AGG + chr2_2:63132217-63132236 Msa0263590:CDS 40.0%
TAGGGATGTTCATCTCTTAC+AGG + chr2_2:63132267-63132286 Msa0263590:CDS 40.0%
ACAAACCATAACAAGGGTAG+AGG - chr2_2:63132298-63132317 None:intergenic 40.0%
TGGAATTGATGAGAATGCTG+TGG + chr2_2:63132393-63132412 Msa0263590:CDS 40.0%
GGAATTGATGAGAATGCTGT+GGG + chr2_2:63132394-63132413 Msa0263590:CDS 40.0%
GAATTGATGAGAATGCTGTG+GGG + chr2_2:63132395-63132414 Msa0263590:CDS 40.0%
AATTGATGAGAATGCTGTGG+GGG + chr2_2:63132396-63132415 Msa0263590:CDS 40.0%
TCTGGGAACATGTCATCAAT+TGG - chr2_2:63132445-63132464 None:intergenic 40.0%
GAGAATTCAACAGGACAATG+CGG - chr2_2:63132495-63132514 None:intergenic 40.0%
CAACTGGTTGAGAATTCAAC+AGG - chr2_2:63132504-63132523 None:intergenic 40.0%
ACAAAGAAACGTGACTCAAC+TGG - chr2_2:63132520-63132539 None:intergenic 40.0%
GCTTCATATATGAACGGTAC+CGG - chr2_2:63132560-63132579 None:intergenic 40.0%
AAGACCAGATGTCAAATCCA+AGG - chr2_2:63132651-63132670 None:intergenic 40.0%
!! TTCCAGTTTCCTTTTGAGAG+CGG + chr2_2:63132746-63132765 Msa0263590:CDS 40.0%
AAGCACTTACACTAGCTCAA+TGG + chr2_2:63132906-63132925 Msa0263590:CDS 40.0%
GTCTGAAAGCAGTCATTATC+TGG + chr2_2:63133027-63133046 Msa0263590:intron 40.0%
CTGAAAGCAGTCATTATCTG+GGG + chr2_2:63133029-63133048 Msa0263590:intron 40.0%
TGAAAGCAGTCATTATCTGG+GGG + chr2_2:63133030-63133049 Msa0263590:intron 40.0%
GAGCAGCATAAAATAGCATC+TGG - chr2_2:63133118-63133137 None:intergenic 40.0%
CGTATTCATCTTTGCTAACC+AGG + chr2_2:63133260-63133279 Msa0263590:CDS 40.0%
! GAGTTGTTTCCAACATGTCA+AGG - chr2_2:63133290-63133309 None:intergenic 40.0%
CATGTTGGAAACAACTCTAG+TGG + chr2_2:63133293-63133312 Msa0263590:CDS 40.0%
! TTTTGCGAAGTTAATGCAGC+AGG + chr2_2:63133380-63133399 Msa0263590:CDS 40.0%
CGCTATGCTCTTAAAGTAGA+TGG + chr2_2:63133472-63133491 Msa0263590:intron 40.0%
AGACAACAGTGTTCATTGCT+TGG + chr2_2:63133618-63133637 Msa0263590:CDS 40.0%
GGGGATTTAAATCCTGCAAT+AGG - chr2_2:63133676-63133695 None:intergenic 40.0%
GTGATCTGAGCTGAAACAGT+GGG - chr2_2:63128571-63128590 None:intergenic 45.0%
AGTGATCTGAGCTGAAACAG+TGG - chr2_2:63128572-63128591 None:intergenic 45.0%
TTCTTCCTCAAGCTCCATAG+AGG + chr2_2:63128754-63128773 Msa0263590:five_prime_UTR 45.0%
TTCTTCCTCTATGGAGCTTG+AGG - chr2_2:63128762-63128781 None:intergenic 45.0%
TGAGAAGGCAACAGCTGATT+CGG + chr2_2:63129486-63129505 Msa0263590:CDS 45.0%
GATCTGCTTAGGCTCAATGT+TGG - chr2_2:63129528-63129547 None:intergenic 45.0%
CATTGAGCCTAAGCAGATCA+AGG + chr2_2:63129529-63129548 Msa0263590:CDS 45.0%
AGCCTAAGCAGATCAAGGTT+TGG + chr2_2:63129534-63129553 Msa0263590:CDS 45.0%
TAGGGAGAAGCAGAGAAAAG+AGG + chr2_2:63129681-63129700 Msa0263590:CDS 45.0%
TCACAGCTGGTGAATGAGAA+TGG + chr2_2:63129790-63129809 Msa0263590:CDS 45.0%
CACAGCTGGTGAATGAGAAT+GGG + chr2_2:63129791-63129810 Msa0263590:CDS 45.0%
CAGATTCCTATCAATTGCGG+AGG + chr2_2:63130178-63130197 Msa0263590:intron 45.0%
ATGTCTCCTCCGCAATTGAT+AGG - chr2_2:63130187-63130206 None:intergenic 45.0%
ATCAATTGCGGAGGAGACAT+TGG + chr2_2:63130187-63130206 Msa0263590:CDS 45.0%
GAGTTCCTTTCAAAGGCTAC+AGG + chr2_2:63130212-63130231 Msa0263590:CDS 45.0%
CAGTTCCTGTAGCCTTTGAA+AGG - chr2_2:63130220-63130239 None:intergenic 45.0%
! TACAGGAACTGCTGTCGATT+GGG + chr2_2:63130229-63130248 Msa0263590:CDS 45.0%
TGATTCTCTACCTTCATCCC+AGG - chr2_2:63130263-63130282 None:intergenic 45.0%
! CATTGTTTGTTAGCCTGGTC+CGG + chr2_2:63130393-63130412 Msa0263590:intron 45.0%
GCAAATATCCCAACCGAATC+CGG - chr2_2:63130415-63130434 None:intergenic 45.0%
CGACAATCACGATACCAAGT+TGG - chr2_2:63130637-63130656 None:intergenic 45.0%
! GTTTTCACAATGTTCCCAGC+TGG + chr2_2:63130667-63130686 Msa0263590:CDS 45.0%
ACAATGTTCCCAGCTGGAAA+TGG + chr2_2:63130673-63130692 Msa0263590:CDS 45.0%
TTGTTCCTCCATTTCCAGCT+GGG - chr2_2:63130684-63130703 None:intergenic 45.0%
ATTGTTCCTCCATTTCCAGC+TGG - chr2_2:63130685-63130704 None:intergenic 45.0%
TTTGGAAAACGGCAGTGTTG+TGG + chr2_2:63130863-63130882 Msa0263590:CDS 45.0%
GTTTGTGAAAGGTCACTGTC+TGG + chr2_2:63130974-63130993 Msa0263590:CDS 45.0%
GTCGAATCAAGTAGCCACTA+GGG - chr2_2:63131057-63131076 None:intergenic 45.0%
! TTGATTCGACCATGTGAAGG+TGG + chr2_2:63131067-63131086 Msa0263590:CDS 45.0%
ATTGATCCTCCACCTTCACA+TGG - chr2_2:63131079-63131098 None:intergenic 45.0%
GGTTTAGGTGGTCTACAATG+TGG - chr2_2:63131105-63131124 None:intergenic 45.0%
GCTCTATGAATCGTCGCAAA+TGG + chr2_2:63131250-63131269 Msa0263590:CDS 45.0%
TGGTGAAGTGGTGTATAGCA+TGG + chr2_2:63131426-63131445 Msa0263590:CDS 45.0%
GGTGAAGTGGTGTATAGCAT+GGG + chr2_2:63131427-63131446 Msa0263590:CDS 45.0%
AAGTGGTGTATAGCATGGGT+CGG + chr2_2:63131431-63131450 Msa0263590:CDS 45.0%
GGTTTCAATGACGCTGTCAA+TGG + chr2_2:63131601-63131620 Msa0263590:CDS 45.0%
! TGGTCTGTTCTGAACTGTGA+TGG + chr2_2:63131640-63131659 Msa0263590:CDS 45.0%
CAATTCCTCCAAGGAGTGAA+AGG - chr2_2:63131735-63131754 None:intergenic 45.0%
TTGCACAGACAATTCCTCCA+AGG - chr2_2:63131744-63131763 None:intergenic 45.0%
CATTTACTGCATCGTGCCAA+TGG - chr2_2:63131801-63131820 None:intergenic 45.0%
CATTGGCACGATGCAGTAAA+TGG + chr2_2:63131799-63131818 Msa0263590:intron 45.0%
AGGCATGATTGCTTGATTGC+CGG - chr2_2:63132034-63132053 None:intergenic 45.0%
!! GGCGGATAATTTCTAGCATC+TGG - chr2_2:63132213-63132232 None:intergenic 45.0%
CATCTTGAGCAAGACCTTCA+AGG - chr2_2:63132234-63132253 None:intergenic 45.0%
TGCTTCCTCTACCCTTGTTA+TGG + chr2_2:63132290-63132309 Msa0263590:intron 45.0%
AACAGCAGCAAATCGAACCT+TGG + chr2_2:63132631-63132650 Msa0263590:CDS 45.0%
CGAACCTTGGATTTGACATC+TGG + chr2_2:63132644-63132663 Msa0263590:CDS 45.0%
!! ATCTGGTCTTGAAGTAAGCC+AGG + chr2_2:63132661-63132680 Msa0263590:CDS 45.0%
GCTCTCAAAAGGAAACTGGA+AGG - chr2_2:63132747-63132766 None:intergenic 45.0%
TGAGCTAGTGTAAGTGCTTC+TGG - chr2_2:63132905-63132924 None:intergenic 45.0%
AATGGATCTGCCAGAGCTAT+AGG + chr2_2:63132924-63132943 Msa0263590:CDS 45.0%
GCACACTTTACCTATAGCTC+TGG - chr2_2:63132937-63132956 None:intergenic 45.0%
! CACTTGCTGCAAAACCAAAC+AGG - chr2_2:63133238-63133257 None:intergenic 45.0%
TTCATCTTTGCTAACCAGGC+TGG + chr2_2:63133264-63133283 Msa0263590:CDS 45.0%
! AACAACTCTAGTGGCTCTAC+AGG + chr2_2:63133302-63133321 Msa0263590:CDS 45.0%
GCAGGTAATATCCTCGAGTT+TGG + chr2_2:63133398-63133417 Msa0263590:intron 45.0%
TGGGATCTGCATGTCAACAA+TGG + chr2_2:63133546-63133565 Msa0263590:CDS 45.0%
GGGATCTGCATGTCAACAAT+GGG + chr2_2:63133547-63133566 Msa0263590:CDS 45.0%
GGATCTGCATGTCAACAATG+GGG + chr2_2:63133548-63133567 Msa0263590:CDS 45.0%
! GAGAGACACCTTGATTCGTC+TGG + chr2_2:63129386-63129405 Msa0263590:CDS 50.0%
! GAGAAGGCAACAGCTGATTC+GGG + chr2_2:63129487-63129506 Msa0263590:CDS 50.0%
GCTCAATGTTGGCCAAAACC+GGG - chr2_2:63129517-63129536 None:intergenic 50.0%
GGCTCAATGTTGGCCAAAAC+CGG - chr2_2:63129518-63129537 None:intergenic 50.0%
CTCAGCTTCAGAGTGTGAAC+AGG + chr2_2:63129707-63129726 Msa0263590:CDS 50.0%
AAATGAGAGGCTGCAGAAGC+AGG + chr2_2:63129765-63129784 Msa0263590:CDS 50.0%
AGAGATGCTAATAGCCCTGC+TGG + chr2_2:63130068-63130087 Msa0263590:CDS 50.0%
GAGATGCTAATAGCCCTGCT+GGG + chr2_2:63130069-63130088 Msa0263590:CDS 50.0%
CTACAGGAACTGCTGTCGAT+TGG + chr2_2:63130228-63130247 Msa0263590:CDS 50.0%
CGGACCAGGCTAACAAACAA+TGG - chr2_2:63130395-63130414 None:intergenic 50.0%
! TTGTTAGCCTGGTCCGGATT+CGG + chr2_2:63130399-63130418 Msa0263590:intron 50.0%
GCCATTTCTCAAGGTGGCAA+CGG + chr2_2:63130433-63130452 Msa0263590:CDS 50.0%
TCCGTTGCCACCTTGAGAAA+TGG - chr2_2:63130437-63130456 None:intergenic 50.0%
ATGTTCCCAGCTGGAAATGG+AGG + chr2_2:63130676-63130695 Msa0263590:CDS 50.0%
GACATATGCTCCAATGACGC+TGG + chr2_2:63130800-63130819 Msa0263590:intron 50.0%
! GAAAGGTCACTGTCTGGTTC+TGG + chr2_2:63130980-63130999 Msa0263590:CDS 50.0%
GGTCGAATCAAGTAGCCACT+AGG - chr2_2:63131058-63131077 None:intergenic 50.0%
ATTCGACCATGTGAAGGTGG+AGG + chr2_2:63131070-63131089 Msa0263590:CDS 50.0%
TGTAGACCACCTAAACCTGC+AGG + chr2_2:63131108-63131127 Msa0263590:CDS 50.0%
GAACTCAGACCTGCAGGTTT+AGG - chr2_2:63131120-63131139 None:intergenic 50.0%
TGCAGGCACTTCGCTATATC+AGG + chr2_2:63131383-63131402 Msa0263590:intron 50.0%
! CTTTTAGCCAACGGTTGAGC+AGG + chr2_2:63131473-63131492 Msa0263590:CDS 50.0%
GCAGGCTGAAATAGGTTTCG+AGG - chr2_2:63131523-63131542 None:intergenic 50.0%
AGGAGTGAAAGGGAACTTGC+TGG - chr2_2:63131724-63131743 None:intergenic 50.0%
GCAAGTTCCCTTTCACTCCT+TGG + chr2_2:63131724-63131743 Msa0263590:CDS 50.0%
AGTTCCCTTTCACTCCTTGG+AGG + chr2_2:63131727-63131746 Msa0263590:CDS 50.0%
GCGAACTAAAACAGCAGGAG+TGG - chr2_2:63131899-63131918 None:intergenic 50.0%
TCTGCTGCATCACTCAAAGC+TGG + chr2_2:63131970-63131989 Msa0263590:CDS 50.0%
! TCACTCAAAGCTGGCTCCTA+TGG + chr2_2:63131979-63131998 Msa0263590:CDS 50.0%
CCTCATTCCAGGATAGCCAT+AGG - chr2_2:63131998-63132017 None:intergenic 50.0%
CCTATGGCTATCCTGGAATG+AGG + chr2_2:63131995-63132014 Msa0263590:CDS 50.0%
ATCCTGGAATGAGGTCTACG+AGG + chr2_2:63132004-63132023 Msa0263590:CDS 50.0%
AACCTCGTAGACCTCATTCC+AGG - chr2_2:63132009-63132028 None:intergenic 50.0%
ATGAGGTCTACGAGGTTCAC+CGG + chr2_2:63132012-63132031 Msa0263590:CDS 50.0%
CTTGAGCAAGACCTTCAAGG+CGG - chr2_2:63132231-63132250 None:intergenic 50.0%
AGGACAATGCGGAAACCAGA+AGG - chr2_2:63132484-63132503 None:intergenic 50.0%
CAGGCAACAGCTCATGCTAA+CGG + chr2_2:63132680-63132699 Msa0263590:CDS 50.0%
GACCGCTCTCAAAAGGAAAC+TGG - chr2_2:63132751-63132770 None:intergenic 50.0%
GCAGGATAATGTTGCAGCCA+TGG + chr2_2:63132772-63132791 Msa0263590:CDS 50.0%
!! CCAGAAGTGTTAACGCTGGA+TGG - chr2_2:63132857-63132876 None:intergenic 50.0%
CCATCCAGCGTTAACACTTC+TGG + chr2_2:63132854-63132873 Msa0263590:CDS 50.0%
TCCAGCGTTAACACTTCTGG+TGG + chr2_2:63132857-63132876 Msa0263590:CDS 50.0%
!! TCCACCAGAAGTGTTAACGC+TGG - chr2_2:63132861-63132880 None:intergenic 50.0%
!! TAAGTGCTTCTGGAGTGCCA+GGG - chr2_2:63132895-63132914 None:intergenic 50.0%
GGCTCTACAGGATATCACAC+TGG + chr2_2:63133314-63133333 Msa0263590:CDS 50.0%
! GGTTTGCTTGTATGCCAGCT+GGG + chr2_2:63133527-63133546 Msa0263590:CDS 50.0%
GCAGAAGCAGGTTTCACAGC+TGG + chr2_2:63129777-63129796 Msa0263590:CDS 55.0%
! GTCAGCATTTGGAGCTGCTG+GGG - chr2_2:63130003-63130022 None:intergenic 55.0%
! CGTCAGCATTTGGAGCTGCT+GGG - chr2_2:63130004-63130023 None:intergenic 55.0%
CCAGCAGCTCCAAATGCTGA+CGG + chr2_2:63130002-63130021 Msa0263590:CDS 55.0%
GCTCCAAATGCTGACGGTAG+TGG + chr2_2:63130008-63130027 Msa0263590:CDS 55.0%
ACGCCACTACCGTCAGCATT+TGG - chr2_2:63130014-63130033 None:intergenic 55.0%
!! CGGTAGTGGCGTTGATTCTG+CGG + chr2_2:63130022-63130041 Msa0263590:CDS 55.0%
TCGATTGGGTCCAGATGCCT+GGG + chr2_2:63130243-63130262 Msa0263590:CDS 55.0%
CTACCTTCATCCCAGGCATC+TGG - chr2_2:63130256-63130275 None:intergenic 55.0%
TTCTCAAGGTGGCAACGGAG+TGG + chr2_2:63130438-63130457 Msa0263590:CDS 55.0%
!! TCACTGTCTGGTTCTGGTGC+TGG + chr2_2:63130986-63131005 Msa0263590:CDS 55.0%
TGTGAGGCAGCTGCAGCATT+AGG - chr2_2:63131013-63131032 None:intergenic 55.0%
AGCTGCCTCACAGTTTGCGA+GGG + chr2_2:63131021-63131040 Msa0263590:CDS 55.0%
TTCACCCCTCGCAAACTGTG+AGG - chr2_2:63131029-63131048 None:intergenic 55.0%
AGGGGTGAAATGCTCCCTAG+TGG + chr2_2:63131040-63131059 Msa0263590:CDS 55.0%
CTCAGACCTGCAGGTTTAGG+TGG - chr2_2:63131117-63131136 None:intergenic 55.0%
GGTCAAGAACTCAGACCTGC+AGG - chr2_2:63131126-63131145 None:intergenic 55.0%
! TCTGAACTGTGATGGTGCCG+AGG + chr2_2:63131648-63131667 Msa0263590:CDS 55.0%
! CTGAACTGTGATGGTGCCGA+GGG + chr2_2:63131649-63131668 Msa0263590:CDS 55.0%
!! CTTTCTGAGGGAGCATCGCT+CGG + chr2_2:63131918-63131937 Msa0263590:CDS 55.0%
GTTCCCAGAAGATGCTCCCT+TGG + chr2_2:63132456-63132475 Msa0263590:CDS 55.0%
!! GCACCAAGGGAGCATCTTCT+GGG - chr2_2:63132462-63132481 None:intergenic 55.0%
!! CGGAAACCAGAAGGCACCAA+GGG - chr2_2:63132475-63132494 None:intergenic 55.0%
CGTTAGCATGAGCTGTTGCC+TGG - chr2_2:63132682-63132701 None:intergenic 55.0%
!! TCCTTTTGAGAGCGGTCTGC+AGG + chr2_2:63132754-63132773 Msa0263590:CDS 55.0%
TCCTGCAGACCGCTCTCAAA+AGG - chr2_2:63132758-63132777 None:intergenic 55.0%
CCATGGCACGTCAGTATGTC+CGG + chr2_2:63132789-63132808 Msa0263590:CDS 55.0%
TGTAGTTTCCGCTGTGCAGG+CGG + chr2_2:63132814-63132833 Msa0263590:intron 55.0%
!! AAGTGCTTCTGGAGTGCCAG+GGG - chr2_2:63132894-63132913 None:intergenic 55.0%
!! GTAAGTGCTTCTGGAGTGCC+AGG - chr2_2:63132896-63132915 None:intergenic 55.0%
! GGGTTTGCTTGTATGCCAGC+TGG + chr2_2:63133526-63133545 Msa0263590:CDS 55.0%
GTTGACATGCAGATCCCAGC+TGG - chr2_2:63133544-63133563 None:intergenic 55.0%
CATATGATCAAGCCGTCGCG+TGG + chr2_2:63133581-63133600 Msa0263590:CDS 55.0%
AGCATGCACTTTCCACGCGA+CGG - chr2_2:63133596-63133615 None:intergenic 55.0%
!! ACAGCTGATTCGGGAGTGCC+CGG + chr2_2:63129496-63129515 Msa0263590:CDS 60.0%
!!! GATTCGGGAGTGCCCGGTTT+TGG + chr2_2:63129502-63129521 Msa0263590:CDS 60.0%
! CCGTCAGCATTTGGAGCTGC+TGG - chr2_2:63130005-63130024 None:intergenic 60.0%
GTCGATTGGGTCCAGATGCC+TGG + chr2_2:63130242-63130261 Msa0263590:CDS 60.0%
GGTCCAGATGCCTGGGATGA+AGG + chr2_2:63130250-63130269 Msa0263590:CDS 60.0%
! TAGCCTGGTCCGGATTCGGT+TGG + chr2_2:63130403-63130422 Msa0263590:intron 60.0%
! AGCCTGGTCCGGATTCGGTT+GGG + chr2_2:63130404-63130423 Msa0263590:intron 60.0%
ATCCCAACCGAATCCGGACC+AGG - chr2_2:63130409-63130428 None:intergenic 60.0%
CAGCTGCCTCACAGTTTGCG+AGG + chr2_2:63131020-63131039 Msa0263590:CDS 60.0%
GCTGCCTCACAGTTTGCGAG+GGG + chr2_2:63131022-63131041 Msa0263590:CDS 60.0%
!! GGAGTGTGCCAGAAGTGCTG+CGG + chr2_2:63131225-63131244 Msa0263590:CDS 60.0%
CGACGTACCTGCTCAACCGT+TGG - chr2_2:63131483-63131502 None:intergenic 60.0%
! GCTGGCTCCTATGGCTATCC+TGG + chr2_2:63131988-63132007 Msa0263590:CDS 60.0%
!! GGCACCAAGGGAGCATCTTC+TGG - chr2_2:63132463-63132482 None:intergenic 60.0%
!! GATGCTCCCTTGGTGCCTTC+TGG + chr2_2:63132466-63132485 Msa0263590:CDS 60.0%
!! GCGGAAACCAGAAGGCACCA+AGG - chr2_2:63132476-63132495 None:intergenic 60.0%
CCGGACATACTGACGTGCCA+TGG - chr2_2:63132792-63132811 None:intergenic 60.0%
GCACAGCGGAAACTACACGC+CGG - chr2_2:63132811-63132830 None:intergenic 60.0%
GCGTGTAGTTTCCGCTGTGC+AGG + chr2_2:63132811-63132830 Msa0263590:intron 60.0%
GGTGGAGCAAAACTCTCCCC+TGG + chr2_2:63132875-63132894 Msa0263590:CDS 60.0%
CCAACATGTCAAGGCCAGCC+TGG - chr2_2:63133281-63133300 None:intergenic 60.0%
!! CCAGGCTGGCCTTGACATGT+TGG + chr2_2:63133278-63133297 Msa0263590:CDS 60.0%
CGAGCAGCAGCCAGCGTCAT+TGG - chr2_2:63130813-63130832 None:intergenic 65.0%
TGGCTGCTGCTCGCGACTTC+TGG + chr2_2:63130820-63130839 Msa0263590:CDS 65.0%
TAGAGCGGCCGCAGCACTTC+TGG - chr2_2:63131236-63131255 None:intergenic 65.0%
!! TGAGGGAGCATCGCTCGGAG+TGG + chr2_2:63131923-63131942 Msa0263590:CDS 65.0%
!! GAGGGAGCATCGCTCGGAGT+GGG + chr2_2:63131924-63131943 Msa0263590:CDS 65.0%
CGTTGCAACCGCCTGCACAG+CGG - chr2_2:63132825-63132844 None:intergenic 65.0%
CGCTGTGCAGGCGGTTGCAA+CGG + chr2_2:63132823-63132842 Msa0263590:intron 65.0%
GGAGTGGCAGCTCGAGCCTG+TGG + chr2_2:63130454-63130473 Msa0263590:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 63128426 63133929 63128426 ID=Msa0263590;Name=Msa0263590
chr2_2 mRNA 63128426 63133929 63128426 ID=Msa0263590-mRNA-1;Parent=Msa0263590;Name=Msa0263590-mRNA-1;_AED=0.10;_eAED=0.10;_QI=898|0.89|0.85|1|0.84|0.75|20|257|833
chr2_2 exon 63128426 63129249 63128426 ID=Msa0263590-mRNA-1:exon:19557;Parent=Msa0263590-mRNA-1
chr2_2 exon 63129270 63129570 63129270 ID=Msa0263590-mRNA-1:exon:19558;Parent=Msa0263590-mRNA-1
chr2_2 exon 63129678 63129837 63129678 ID=Msa0263590-mRNA-1:exon:19559;Parent=Msa0263590-mRNA-1
chr2_2 exon 63129999 63130090 63129999 ID=Msa0263590-mRNA-1:exon:19560;Parent=Msa0263590-mRNA-1
chr2_2 exon 63130181 63130271 63130181 ID=Msa0263590-mRNA-1:exon:19561;Parent=Msa0263590-mRNA-1
chr2_2 exon 63130406 63130501 63130406 ID=Msa0263590-mRNA-1:exon:19562;Parent=Msa0263590-mRNA-1
chr2_2 exon 63130610 63130723 63130610 ID=Msa0263590-mRNA-1:exon:19563;Parent=Msa0263590-mRNA-1
chr2_2 exon 63130801 63130884 63130801 ID=Msa0263590-mRNA-1:exon:19564;Parent=Msa0263590-mRNA-1
chr2_2 exon 63130974 63131129 63130974 ID=Msa0263590-mRNA-1:exon:19565;Parent=Msa0263590-mRNA-1
chr2_2 exon 63131221 63131295 63131221 ID=Msa0263590-mRNA-1:exon:19566;Parent=Msa0263590-mRNA-1
chr2_2 exon 63131388 63131494 63131388 ID=Msa0263590-mRNA-1:exon:19567;Parent=Msa0263590-mRNA-1
chr2_2 exon 63131600 63131783 63131600 ID=Msa0263590-mRNA-1:exon:19568;Parent=Msa0263590-mRNA-1
chr2_2 exon 63131892 63132080 63131892 ID=Msa0263590-mRNA-1:exon:19569;Parent=Msa0263590-mRNA-1
chr2_2 exon 63132214 63132288 63132214 ID=Msa0263590-mRNA-1:exon:19570;Parent=Msa0263590-mRNA-1
chr2_2 exon 63132385 63132519 63132385 ID=Msa0263590-mRNA-1:exon:19571;Parent=Msa0263590-mRNA-1
chr2_2 exon 63132614 63132814 63132614 ID=Msa0263590-mRNA-1:exon:19572;Parent=Msa0263590-mRNA-1
chr2_2 exon 63132833 63132945 63132833 ID=Msa0263590-mRNA-1:exon:19573;Parent=Msa0263590-mRNA-1
chr2_2 exon 63133039 63133144 63133039 ID=Msa0263590-mRNA-1:exon:19574;Parent=Msa0263590-mRNA-1
chr2_2 exon 63133252 63133401 63133252 ID=Msa0263590-mRNA-1:exon:19575;Parent=Msa0263590-mRNA-1
chr2_2 exon 63133526 63133929 63133526 ID=Msa0263590-mRNA-1:exon:19576;Parent=Msa0263590-mRNA-1
chr2_2 five_prime_UTR 63128426 63129249 63128426 ID=Msa0263590-mRNA-1:five_prime_utr;Parent=Msa0263590-mRNA-1
chr2_2 five_prime_UTR 63129270 63129343 63129270 ID=Msa0263590-mRNA-1:five_prime_utr;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63129344 63129570 63129344 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63129678 63129837 63129678 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63129999 63130090 63129999 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63130181 63130271 63130181 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63130406 63130501 63130406 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63130610 63130723 63130610 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63130801 63130884 63130801 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63130974 63131129 63130974 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63131221 63131295 63131221 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63131388 63131494 63131388 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63131600 63131783 63131600 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63131892 63132080 63131892 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63132214 63132288 63132214 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63132385 63132519 63132385 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63132614 63132814 63132614 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63132833 63132945 63132833 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63133039 63133144 63133039 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63133252 63133401 63133252 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 CDS 63133526 63133672 63133526 ID=Msa0263590-mRNA-1:cds;Parent=Msa0263590-mRNA-1
chr2_2 three_prime_UTR 63133673 63133929 63133673 ID=Msa0263590-mRNA-1:three_prime_utr;Parent=Msa0263590-mRNA-1
Gene Sequence

>Msa0263590

ATGGCTATGGCTGTTGCACAACAACAAAGAGATAACAGCATTGAGAGACACCTTGATTCGTCTGGCAAATATGTGCGGTACACTGCTGAACAGATTGAAGCTTTGGAAAAGGTTTATGTGGAATGCCCTAAGCCTAGTTCATTGAGAAGGCAACAGCTGATTCGGGAGTGCCCGGTTTTGGCCAACATTGAGCCTAAGCAGATCAAGGTTTGGTTTCAGAATAGGAGGTGTAGGGAGAAGCAGAGAAAAGAGGCTTCTCAGCTTCAGAGTGTGAACAGGAAACTTTCTGCGATGAATAAGCTGTTGATGGAGGAAAATGAGAGGCTGCAGAAGCAGGTTTCACAGCTGGTGAATGAGAATGGGTTTATGCGCCAGCAATTACACATTACCCCAGCAGCTCCAAATGCTGACGGTAGTGGCGTTGATTCTGCGGCTGCTGCTCCTATGAATTCATTGAGAGATGCTAATAGCCCTGCTGGATTCCTATCAATTGCGGAGGAGACATTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATATTTGCCATTTCTCAAGGTGGCAACGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTACTAAGATTGTGGAGATCTTAAAAGATCGCCCAACTTGGTATCGTGATTGTCGGAGTTCAGAAGTTTTCACAATGTTCCCAGCTGGAAATGGAGGAACAATTGAACTTGTTTACACACAGACATATGCTCCAATGACGCTGGCTGCTGCTCGCGACTTCTGGACTCTAAGATACACTACAAATTTGGAAAACGGCAGTGTTGTGGTTTGTGAAAGGTCACTGTCTGGTTCTGGTGCTGGTCCTAATGCTGCAGCTGCCTCACAGTTTGCGAGGGGTGAAATGCTCCCTAGTGGCTACTTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCACATTGTAGACCACCTAAACCTGCAGGCATGGAGTGTGCCAGAAGTGCTGCGGCCGCTCTATGAATCGTCGCAAATGGTAGCTCAGAGATTGACAATTGCGGCACTTCGCTATATCAGGCAAGTAGCTCAAGAAACAAGTGGTGAAGTGGTGTATAGCATGGGTCGGCAACCTGCAGTTCTTAGAACTTTTAGCCAACGGTTGAGCAGAGGTTTCAATGACGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTTCTGAACTGTGATGGTGCCGAGGGTGTTACTATTTCAGTGAATTCAATCAAGAATTTGAGTGGCACTTCTAATCCAGCAAGTTCCCTTTCACTCCTTGGAGGAATTGTCTGTGCAAAAGCTTCTATGTTACTCCAAAACACCACTCCTGCTGTTTTAGTTCGCTTTCTGAGGGAGCATCGCTCGGAGTGGGCTGATTTTAGTGTTGATGCCTTTTCTGCTGCATCACTCAAAGCTGGCTCCTATGGCTATCCTGGAATGAGGTCTACGAGGTTCACCGGCAATCAAGCAATCATGCCTCTTGGACATACAATTGAACATGAAGAGATGCTAGAAATTATCCGCCTTGAAGGTCTTGCTCAAGATGATTCTTTTGTTTCTAGGGATGTTCATCTCTTACAGTTATGTACTGGAATTGATGAGAATGCTGTGGGGGCTTGTTCCGAGCTCATATTTGCTCCAATTGATGACATGTTCCCAGAAGATGCTCCCTTGGTGCCTTCTGGTTTCCGCATTGTCCTGTTGAATTCTCAACCAGGTGATACAAAGAACACAACAGCAGCAAATCGAACCTTGGATTTGACATCTGGTCTTGAAGTAAGCCAGGCAACAGCTCATGCTAACGGAGATGCATCGTGTTCTAACAATCGATGTGCGTTGACTGTTGCCTTCCAGTTTCCTTTTGAGAGCGGTCTGCAGGATAATGTTGCAGCCATGGCACGTCAGTATGTCCGGCGTGCGGTTGCAACGGCTATATCTCCATCCAGCGTTAACACTTCTGGTGGAGCAAAACTCTCCCCTGGCACTCCAGAAGCACTTACACTAGCTCAATGGATCTGCCAGAGCTATAGTCATTATCTGGGGGCGCAACTGCTGAGATCTGATTCTCTTATTGGTGATATGCTACTGAAACATTTGTGGCATCATCCAGATGCTATTTTATGCTGCTCTTTGAAGCAAGTGCCCGTATTCATCTTTGCTAACCAGGCTGGCCTTGACATGTTGGAAACAACTCTAGTGGCTCTACAGGATATCACACTGGACAAAATATTTGATGAATCTGCACGCAAGAATTTGATTGCATATTTTGCGAAGTTAATGCAGCAGGGGTTTGCTTGTATGCCAGCTGGGATCTGCATGTCAACAATGGGGCGACATGCTTCATATGATCAAGCCGTCGCGTGGAAAGTGCATGCTGAAGACAACAGTGTTCATTGCTTGGCTTTCTCGTTCATTAATTGGTCATTTATATGA
Protein sequence

>Msa0263590

MAMAVAQQQRDNSIERHLDSSGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRECPVLANIEPKQIKVWFQNRRCREKQRKEASQLQSVNRKLSAMNKLLMEENERLQKQVSQLVNENGFMRQQLHITPAAPNADGSGVDSAAAAPMNSLRDANSPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQGGNGVAARACGLVSLEPTKIVEILKDRPTWYRDCRSSEVFTMFPAGNGGTIELVYTQTYAPMTLAAARDFWTLRYTTNLENGSVVVCERSLSGSGAGPNAAAASQFARGEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSQMVAQRLTIAALRYIRQVAQETSGEVVYSMGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEGVTISVNSIKNLSGTSNPASSLSLLGGIVCAKASMLLQNTTPAVLVRFLREHRSEWADFSVDAFSAASLKAGSYGYPGMRSTRFTGNQAIMPLGHTIEHEEMLEIIRLEGLAQDDSFVSRDVHLLQLCTGIDENAVGACSELIFAPIDDMFPEDAPLVPSGFRIVLLNSQPGDTKNTTAANRTLDLTSGLEVSQATAHANGDASCSNNRCALTVAFQFPFESGLQDNVAAMARQYVRRAVATAISPSSVNTSGGAKLSPGTPEALTLAQWICQSYSHYLGAQLLRSDSLIGDMLLKHLWHHPDAILCCSLKQVPVFIFANQAGLDMLETTLVALQDITLDKIFDESARKNLIAYFAKLMQQGFACMPAGICMSTMGRHASYDQAVAWKVHAEDNSVHCLAFSFINWSFI*