AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0264540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0264540 MtrunA17_Chr2g0328721 95.091 876 41 2 1 875 1 875 0.0 1673
Msa0264540 MtrunA17_Chr4g0032351 50.055 905 366 17 1 887 1 837 0.0 684
Msa0264540 MtrunA17_Chr4g0008861 36.066 366 200 7 511 868 537 876 1.52e-58 216
Msa0264540 MtrunA17_Chr7g0240931 32.391 389 196 11 515 880 470 814 1.04e-48 186
Msa0264540 MtrunA17_Chr5g0397401 29.894 378 200 15 526 870 209 554 3.14e-17 86.3
Msa0264540 MtrunA17_Chr1g0186181 34.615 130 63 4 755 873 480 598 7.81e-17 85.1
Msa0264540 MtrunA17_Chr8g0386851 40.854 164 83 7 711 870 510 663 1.93e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0264540 AT5G59020.1 30.489 879 412 30 43 871 2 731 8.26e-86 291
Msa0264540 AT2G29510.1 41.304 368 157 8 516 873 463 781 1.49e-69 248
Msa0264540 AT2G29510.1 26.931 505 320 11 7 501 36 501 4.33e-27 119
Msa0264540 AT5G01030.3 35.411 353 169 11 522 868 419 718 1.89e-46 179
Msa0264540 AT5G01030.1 35.411 353 169 11 522 868 419 718 1.89e-46 179
Msa0264540 AT5G01030.2 35.411 353 169 11 522 868 419 718 1.89e-46 179
Msa0264540 AT2G37930.3 36.972 284 122 12 589 868 299 529 1.63e-34 140
Msa0264540 AT2G37930.4 36.972 284 122 12 589 868 299 529 1.63e-34 140
Msa0264540 AT2G37930.1 36.972 284 122 12 589 868 271 501 2.11e-34 139
Msa0264540 AT2G37930.2 39.269 219 89 9 589 803 299 477 6.08e-29 122
Msa0264540 AT1G04490.9 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.5 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.6 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.3 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.7 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.2 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.1 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G04490.8 41.880 117 51 4 753 868 288 388 3.94e-20 94.4
Msa0264540 AT1G63520.1 30.688 189 100 6 686 866 310 475 8.99e-18 88.2
Msa0264540 AT2G33360.2 39.655 116 60 4 755 868 323 430 1.80e-17 86.7
Msa0264540 AT2G33360.1 39.655 116 60 4 755 868 478 585 2.65e-17 87.0
Msa0264540 AT1G04490.4 63.830 47 16 1 753 799 288 333 9.57e-14 74.3
Msa0264540 AT4G11450.1 36.420 162 87 5 711 868 474 623 1.53e-12 72.0

Find 261 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTCTGAAATAAATTTA+TGG 0.138393 2_2:-64471019 None:intergenic
GTTTCTCAGTAGTTACTTTC+TGG 0.157657 2_2:-64470576 None:intergenic
CTCAATTGTCAACTCCCTTT+TGG 0.160961 2_2:-64472623 None:intergenic
GAAAACTTTACCAGGTTATT+TGG 0.162566 2_2:+64469559 Msa0264540:CDS
GGCTTCACAAATAAAGTTTC+TGG 0.172294 2_2:+64470640 Msa0264540:CDS
TCAACAACTCTCACACATTT+TGG 0.181247 2_2:+64468105 Msa0264540:five_prime_UTR
TGTTGAGCTTCGGCTACTTC+TGG 0.183777 2_2:-64469678 None:intergenic
CATGCTGGTGGATAACTTTC+AGG 0.191990 2_2:-64469363 None:intergenic
TCCAAGGTTGTTTGCATATC+AGG 0.215229 2_2:-64470238 None:intergenic
ACTCTAATTACATGATTTAT+TGG 0.218147 2_2:-64472510 None:intergenic
AATATACTCCAGGTTCAAAA+TGG 0.220776 2_2:-64472024 None:intergenic
GGATCAAGTAACCTCCTTAA+AGG 0.233429 2_2:-64470961 None:intergenic
TGAGTTCCATATGTAAATTT+TGG 0.234628 2_2:+64472642 Msa0264540:three_prime_UTR
ATGTTTATCTAACTGATATT+AGG 0.238504 2_2:+64469328 Msa0264540:five_prime_UTR
CAAATATTTGCTGCACTAAA+TGG 0.238536 2_2:-64472315 None:intergenic
TTTACATCCACATATTATTA+AGG 0.241348 2_2:+64470003 Msa0264540:CDS
TCCTTCCATTTCTCGCTTCT+CGG 0.255192 2_2:+64468246 Msa0264540:five_prime_UTR
CAAATAATCTTGTTTGACTA+TGG 0.257790 2_2:-64470276 None:intergenic
GAGGCAGACAAATCTTTAAA+AGG 0.260461 2_2:+64469467 Msa0264540:CDS
AAAGCAGGTCCAGCCCTTTA+AGG 0.262079 2_2:+64470947 Msa0264540:CDS
TGATCAAATGGAAAAGAAAA+AGG 0.267133 2_2:+64470099 Msa0264540:CDS
AACACTCAACGACGTCGTTT+TGG 0.269490 2_2:+64468155 Msa0264540:five_prime_UTR
TGCCAACAGCAAATGTAAAA+AGG 0.275238 2_2:-64471233 None:intergenic
TATGTTGGTTCAAACATTTC+AGG 0.302476 2_2:+64470901 Msa0264540:CDS
CGGAAAGGTGAAGAGCTTCT+TGG 0.312565 2_2:-64470598 None:intergenic
AAACTCCCTTACGAACTTTC+TGG 0.316083 2_2:+64472115 Msa0264540:CDS
TTATGGCAGTTTGCTGCCTT+TGG 0.323720 2_2:-64470835 None:intergenic
AGATTTGTCTGCCTCGTCTT+TGG 0.325531 2_2:-64469459 None:intergenic
ATATACTAGTAGGATGGTTT+CGG 0.327833 2_2:-64469958 None:intergenic
TGAATGTTGGGGTCCTTGAT+TGG 0.329534 2_2:+64469612 Msa0264540:CDS
TGATAGAGTCCACACGGTTC+TGG 0.329830 2_2:-64471470 None:intergenic
TATACTAGTAGGATGGTTTC+GGG 0.333075 2_2:-64469957 None:intergenic
AACTAGGTTGTGACTCTTGC+TGG 0.337889 2_2:-64470387 None:intergenic
TGTACCAAGGCATATTAATC+TGG 0.338212 2_2:+64472875 Msa0264540:three_prime_UTR
ATTCGTACACCATTGATTTA+CGG 0.340316 2_2:+64472750 Msa0264540:three_prime_UTR
CTCCATCGAGGGAAAGAATC+AGG 0.342645 2_2:+64472147 Msa0264540:CDS
ATTCTAGAAGGGGTCTAAAT+TGG 0.346390 2_2:+64469750 Msa0264540:CDS
GTTGAGCTTCGGCTACTTCT+GGG 0.350508 2_2:-64469677 None:intergenic
CGGAGAAAGCTTTGAATGTT+GGG 0.350856 2_2:+64469600 Msa0264540:CDS
TGATTTACGGAAAGTACATT+TGG 0.353358 2_2:+64472763 Msa0264540:three_prime_UTR
AACATTTCAGGCAACAAATC+AGG 0.356426 2_2:+64470913 Msa0264540:CDS
TTTGAAACTTTCGGCATCAA+TGG 0.361650 2_2:-64470410 None:intergenic
GGATAGGCAGCGTAACTTGC+AGG 0.364076 2_2:-64472228 None:intergenic
GGAGTATATTCAGTAGCTTT+TGG 0.369009 2_2:+64472037 Msa0264540:CDS
CTTATTGAGCGCTGGAAAAC+TGG 0.372139 2_2:+64471705 Msa0264540:CDS
AAAGGCAAACAACTTGTAGA+AGG 0.380262 2_2:+64469504 Msa0264540:CDS
ATCAGTGCAATCTCACTCTA+TGG 0.382134 2_2:+64469802 Msa0264540:CDS
GATTTACCAAAATTTACATA+TGG 0.390659 2_2:-64472648 None:intergenic
TCTGCACGTTTGATTATTGT+TGG 0.392375 2_2:-64471781 None:intergenic
ACTTATGTGGTAATTCTAGA+AGG 0.392524 2_2:+64469738 Msa0264540:CDS
CTAGGTAATATAAGAACAAT+TGG 0.399469 2_2:-64470181 None:intergenic
TGATGGCAGTTTGCTGCCTT+AGG 0.400480 2_2:-64470994 None:intergenic
ATGACATGGCGAACGTAATC+AGG 0.402175 2_2:-64471402 None:intergenic
GTAAGTGACCACATTCAAAA+TGG 0.402371 2_2:+64472548 Msa0264540:three_prime_UTR
CCCCTGATTCTTTCCCTCGA+TGG 0.412086 2_2:-64472149 None:intergenic
TGACTTTCTCTAAGTTCATC+TGG 0.412561 2_2:-64470361 None:intergenic
TGATTGCGGAGGTTGGGATT+TGG 0.414627 2_2:+64471737 Msa0264540:CDS
AACTGCATTCACCTTGTCTT+GGG 0.415203 2_2:-64471299 None:intergenic
ATGCGTATAACTGATAGCTT+TGG 0.419288 2_2:-64471595 None:intergenic
TATATAGCTGTCAGATCCTC+TGG 0.421401 2_2:+64469845 Msa0264540:CDS
TTGGACAAGGACCAGAGGTT+TGG 0.422199 2_2:+64471111 Msa0264540:CDS
AAATTTATTTGGAAGACAAA+AGG 0.426113 2_2:+64469281 Msa0264540:five_prime_UTR
ACGTACTTTCAGTTTATGAT+TGG 0.427028 2_2:+64472703 Msa0264540:three_prime_UTR
AAGGGGCTGACCATTCTTCA+TGG 0.430882 2_2:-64471214 None:intergenic
AAAATTTAGACCCTTCCAAC+TGG 0.431439 2_2:-64472261 None:intergenic
ACAACCTTGGATCAGAAGTT+AGG 0.433180 2_2:+64470250 Msa0264540:CDS
GCGATACCTCCATGGAGTTA+TGG 0.438420 2_2:-64470852 None:intergenic
GGTCCTTGATTGGACCAGTC+TGG 0.439964 2_2:+64469622 Msa0264540:CDS
TGAATGTCAAGATCTATTAC+AGG 0.440514 2_2:+64471623 Msa0264540:CDS
CCACTTTCCTTAATAATATG+TGG 0.445996 2_2:-64470010 None:intergenic
GAGGAGATTCCTTGATCCAC+TGG 0.447216 2_2:+64470807 Msa0264540:CDS
TCAGGTTTGAACCCATCAAC+AGG 0.452740 2_2:-64469395 None:intergenic
TACTAAGCCTGATTTCCAAA+AGG 0.453266 2_2:+64472608 Msa0264540:three_prime_UTR
TATGTACAGGAGGGTTGATT+CGG 0.458737 2_2:-64470304 None:intergenic
AGAATCAGGGGAATCTCTAT+TGG 0.462768 2_2:+64472161 Msa0264540:CDS
GATCAAGTAACCTCCTTAAA+GGG 0.464365 2_2:-64470960 None:intergenic
GGTTCAAACAGGTGAACTAA+AGG 0.464778 2_2:+64472182 Msa0264540:CDS
AGGATCTGACAGCTATATAA+TGG 0.464917 2_2:-64469841 None:intergenic
ATAGCAGCAAGCTCGTCATC+TGG 0.464983 2_2:-64471558 None:intergenic
ATCCACCATTGCAATGCAAA+TGG 0.465100 2_2:-64472089 None:intergenic
AACAGTGCGCTTCCTTTCCT+CGG 0.465138 2_2:-64470512 None:intergenic
CCGGAGAAAGCTTTGAATGT+TGG 0.465166 2_2:+64469599 Msa0264540:CDS
CAACTGCATTCACCTTGTCT+TGG 0.465216 2_2:-64471300 None:intergenic
TACTAGAAGATGTTGAGCTT+CGG 0.467189 2_2:-64469688 None:intergenic
CATTCCCATTCTGACGGGTA+CGG 0.468055 2_2:-64470467 None:intergenic
ATGAGTAGAAAACCTGTTGA+TGG 0.468639 2_2:+64469383 Msa0264540:CDS
CCAACATTCAAAGCTTTCTC+CGG 0.470901 2_2:-64469599 None:intergenic
TATGTGTGGCTACGGAGCTC+TGG 0.472752 2_2:-64470690 None:intergenic
CTTTCGGCATCAATGGAACT+AGG 0.473479 2_2:-64470403 None:intergenic
GATCCTGTGATTGCGGAGGT+TGG 0.473723 2_2:+64471730 Msa0264540:CDS
ATCCTGTGATTGCGGAGGTT+GGG 0.475937 2_2:+64471731 Msa0264540:CDS
GTGAAGCTGCCTCGTAAGTC+CGG 0.479412 2_2:-64470048 None:intergenic
AGTGATAAACCTGGAAATGC+TGG 0.482598 2_2:+64470763 Msa0264540:CDS
ACCCTTCCAACTGGAGAGAC+AGG 0.483381 2_2:-64472252 None:intergenic
CTCCTGTCTCTCCAGTTGGA+AGG 0.483766 2_2:+64472250 Msa0264540:three_prime_UTR
GAGCACGCAAGATGATCAAA+TGG 0.485322 2_2:+64470087 Msa0264540:CDS
AATTTATTTGGAAGACAAAA+GGG 0.485816 2_2:+64469282 Msa0264540:five_prime_UTR
GCTGCCTTTGGTTTCACCAG+TGG 0.487185 2_2:-64470823 None:intergenic
ACAAATAAGAGTGGTAGGTC+AGG 0.487236 2_2:+64471051 Msa0264540:CDS
CTCTGCAAATGCACCTCCTA+CGG 0.488282 2_2:+64470546 Msa0264540:CDS
GAATCTCTATTGGTTCAAAC+AGG 0.488341 2_2:+64472171 Msa0264540:CDS
TTGGTTTCACCAGTGGATCA+AGG 0.488599 2_2:-64470816 None:intergenic
TCCTGTCTCTCCAGTTGGAA+GGG 0.491356 2_2:+64472251 Msa0264540:three_prime_UTR
GGTTACCGAGAAGCGAGAAA+TGG 0.495085 2_2:-64468251 None:intergenic
AAGGAATCTCCTCAAAGGGC+TGG 0.495949 2_2:-64470797 None:intergenic
ATGTACTTTCCGTAAATCAA+TGG 0.497080 2_2:-64472759 None:intergenic
TATCCTCCTGTCTCTCCAGT+TGG 0.497408 2_2:+64472246 Msa0264540:three_prime_UTR
TTGAACTCAACTCTAAGATT+CGG 0.500482 2_2:-64472679 None:intergenic
CTCCATTTGCATTGCAATGG+TGG 0.500869 2_2:+64472087 Msa0264540:CDS
TTTCCCAGATTAATATGCCT+TGG 0.502109 2_2:-64472879 None:intergenic
GGCACCCGTACCCGTCAGAA+TGG 0.502194 2_2:+64470462 Msa0264540:CDS
GGCAGCTTCACATGCTAAGT+TGG 0.502580 2_2:+64470060 Msa0264540:CDS
TTTCCAGGTTTATCACTGCC+TGG 0.503165 2_2:-64470757 None:intergenic
GATCGAGTTATGAGCTTGCA+AGG 0.503551 2_2:-64472387 None:intergenic
CTTGATCCAGAAAGTTCGTA+AGG 0.503613 2_2:-64472121 None:intergenic
AAGAGTGGTAGGTCAGGTAA+TGG 0.504626 2_2:+64471057 Msa0264540:CDS
GGCAACAAATCAGGTGCTGC+TGG 0.505394 2_2:+64470922 Msa0264540:CDS
CTTCGTCGCTTATTGAGCGC+TGG 0.506867 2_2:+64471697 Msa0264540:CDS
TAAAGTTTCTGGCTGTAAAG+AGG 0.506903 2_2:+64470651 Msa0264540:CDS
CCGTCGACTTAGCTTCAGCA+TGG 0.509438 2_2:+64470618 Msa0264540:CDS
AAAACAGGTCCAGCCCTTTG+AGG 0.509553 2_2:+64470788 Msa0264540:CDS
GTTCAAACAGGTGAACTAAA+GGG 0.512189 2_2:+64472183 Msa0264540:exon
AGAGTGGTAGGTCAGGTAAT+GGG 0.513259 2_2:+64471058 Msa0264540:CDS
AGTGAGATTGCACTGATTGT+GGG 0.514414 2_2:-64469796 None:intergenic
CAACATTCAAAGCTTTCTCC+GGG 0.514623 2_2:-64469598 None:intergenic
ACTAAGCCTGATTTCCAAAA+GGG 0.515341 2_2:+64472609 Msa0264540:three_prime_UTR
GGGATTATCCTTTGACGAGA+AGG 0.515743 2_2:-64469776 None:intergenic
AAGTAACCTCCTTAAAGGGC+TGG 0.516427 2_2:-64470956 None:intergenic
GAACCTTTCAATATACTAGT+AGG 0.516909 2_2:-64469968 None:intergenic
ATATACTCCAGGTTCAAAAT+GGG 0.518411 2_2:-64472023 None:intergenic
CCACATATTATTAAGGAAAG+TGG 0.519204 2_2:+64470010 Msa0264540:CDS
GCACCCGTACCCGTCAGAAT+GGG 0.519505 2_2:+64470463 Msa0264540:CDS
GAAATAAATTTATGGAGTGA+TGG 0.519977 2_2:-64471011 None:intergenic
GCATTCACCTTGTCTTGGGA+CGG 0.522795 2_2:-64471295 None:intergenic
GTTATTCTTACGTGCTGCAT+AGG 0.523571 2_2:+64472358 Msa0264540:three_prime_UTR
ATCCCAACCTCCGCAATCAC+AGG 0.524007 2_2:-64471733 None:intergenic
TCTCCCCTCTCCAAATAACC+TGG 0.524321 2_2:-64469569 None:intergenic
TTTACCAGGTTATTTGGAGA+GGG 0.524450 2_2:+64469565 Msa0264540:CDS
ATTCCCATTCTGACGGGTAC+GGG 0.525477 2_2:-64470466 None:intergenic
AGATCCTCTGGAGAGAATGC+TGG 0.527741 2_2:+64469857 Msa0264540:CDS
GATCAAGGAATCTCCTCAAA+GGG 0.529529 2_2:-64470801 None:intergenic
AAGTTCATCTGGCAGAGGAC+AGG 0.529947 2_2:-64470350 None:intergenic
GGGAAAGATGATCAATAGTC+CGG 0.530363 2_2:-64469937 None:intergenic
TCCTGATATGCAAACAACCT+TGG 0.531394 2_2:+64470237 Msa0264540:CDS
GAGTCCATGCAGATCTAGAA+AGG 0.532150 2_2:+64470489 Msa0264540:CDS
CTTATGTGGTAATTCTAGAA+GGG 0.535601 2_2:+64469739 Msa0264540:CDS
CTGAGAATATCCATGAAGAA+TGG 0.536177 2_2:+64471204 Msa0264540:CDS
TGGTTACAAATAAGAGTGGT+AGG 0.536577 2_2:+64471046 Msa0264540:CDS
TGAGCTTCGGCTACTTCTGG+GGG 0.537355 2_2:-64469675 None:intergenic
CGTCGACTTAGCTTCAGCAT+GGG 0.537553 2_2:+64470619 Msa0264540:CDS
TTCTGGTCTACTTCCGTAGG+AGG 0.541819 2_2:-64470559 None:intergenic
TGCGTATAACTGATAGCTTT+GGG 0.543220 2_2:-64471594 None:intergenic
AAAGCTACTGAATATACTCC+AGG 0.543507 2_2:-64472034 None:intergenic
ATTGCGAGTCAGATATGTAC+AGG 0.545276 2_2:-64470317 None:intergenic
GCAAATGGAGAACGCTTGCA+AGG 0.545356 2_2:-64472074 None:intergenic
GTACCAAGGCATATTAATCT+GGG 0.545421 2_2:+64472876 Msa0264540:three_prime_UTR
CTGTGGAACAACCAAACCTC+TGG 0.545770 2_2:-64471122 None:intergenic
GTATATTGAAAGGTTCTGAC+AGG 0.547243 2_2:+64469975 Msa0264540:CDS
TGATCCACTGCTGAAACCTA+AGG 0.547319 2_2:+64470978 Msa0264540:CDS
AAGCACATGAAAACTTTACC+AGG 0.547766 2_2:+64469551 Msa0264540:CDS
GTTCTCCATTTGCATTGCAA+TGG 0.547798 2_2:+64472084 Msa0264540:CDS
ATTGGTCTCCTTCTCGTCAA+AGG 0.548579 2_2:+64469768 Msa0264540:CDS
TTGAGCTTCGGCTACTTCTG+GGG 0.548970 2_2:-64469676 None:intergenic
GCTTCCTAACTTCTGATCCA+AGG 0.549468 2_2:-64470254 None:intergenic
GTTCCAGACTGGTCCAATCA+AGG 0.550773 2_2:-64469625 None:intergenic
GTTAATGCACATGATATGCT+TGG 0.550960 2_2:+64470148 Msa0264540:CDS
CTTTCAATATACTAGTAGGA+TGG 0.558682 2_2:-64469964 None:intergenic
CAGGTGCTGCTGGTAAAAGC+AGG 0.560366 2_2:+64470932 Msa0264540:CDS
ATTGGACCAGTCTGGAACGT+TGG 0.562574 2_2:+64469630 Msa0264540:CDS
CATGCTAGCTCAAACATGCC+AGG 0.564429 2_2:+64470739 Msa0264540:CDS
GCTGCCTTAGGTTTCAGCAG+TGG 0.565371 2_2:-64470982 None:intergenic
GGATCAAGGAATCTCCTCAA+AGG 0.565697 2_2:-64470802 None:intergenic
ATTTGCATTGCAATGGTGGA+TGG 0.566087 2_2:+64472091 Msa0264540:CDS
GACGAAGGTCCACCATCACT+TGG 0.566445 2_2:-64471681 None:intergenic
CTTTACCAGGTTATTTGGAG+AGG 0.566909 2_2:+64469564 Msa0264540:CDS
GAGTGAGATTGCACTGATTG+TGG 0.567293 2_2:-64469797 None:intergenic
GGAGAAAGCTTTGAATGTTG+GGG 0.568033 2_2:+64469601 Msa0264540:CDS
CATCCTACTAGTATATTGAA+AGG 0.568484 2_2:+64469965 Msa0264540:CDS
TTCTGAACTAGGTTTATGTG+TGG 0.570235 2_2:-64470704 None:intergenic
GGAAGACTATGAACTCCGCT+TGG 0.570545 2_2:-64471660 None:intergenic
GAAAATGCGAGAGGTTATGT+TGG 0.570791 2_2:+64470886 Msa0264540:CDS
TCGGCCTTTCTAGATCTGCA+TGG 0.571902 2_2:-64470493 None:intergenic
ACTAAAGCAAGGAGATACTC+AGG 0.572897 2_2:+64471521 Msa0264540:CDS
TCCATCGAGGGAAAGAATCA+GGG 0.573548 2_2:+64472148 Msa0264540:CDS
CATAGTCTTCCAAGTGATGG+TGG 0.574925 2_2:+64471672 Msa0264540:CDS
TTTATTTCAGAAAGAGTCTG+TGG 0.575556 2_2:+64471026 Msa0264540:CDS
TCTCTAAGTTCATCTGGCAG+AGG 0.575764 2_2:-64470355 None:intergenic
ACATGATTTATTGGTCAACC+AGG 0.576184 2_2:-64472501 None:intergenic
TTAATGCACATGATATGCTT+GGG 0.581166 2_2:+64470149 Msa0264540:CDS
AACTGGAGAGACAGGAGGAT+AGG 0.582482 2_2:-64472244 None:intergenic
ATGCAGATCTAGAAAGGCCG+AGG 0.582971 2_2:+64470495 Msa0264540:CDS
GTACTGCCAACGTTCCAGAC+TGG 0.583526 2_2:-64469636 None:intergenic
TGGAACATACGAAGTTGCAA+AGG 0.585177 2_2:+64472783 Msa0264540:three_prime_UTR
ACTAGGTTGTGACTCTTGCT+GGG 0.586985 2_2:-64470386 None:intergenic
GGACTCATTCCCATTCTGAC+GGG 0.587176 2_2:-64470472 None:intergenic
GTGGCATCTTGTCACATGAC+CGG 0.587769 2_2:+64470029 Msa0264540:CDS
TGAGTAGAAAACCTGTTGAT+GGG 0.591717 2_2:+64469384 Msa0264540:CDS
ACTTTCTGGTCTACTTCCGT+AGG 0.592655 2_2:-64470562 None:intergenic
TGGACTCATTCCCATTCTGA+CGG 0.592869 2_2:-64470473 None:intergenic
GATCTAGAAAGGCCGAGGAA+AGG 0.593514 2_2:+64470500 Msa0264540:CDS
GCAGGTCCAGCCCTTTAAGG+AGG 0.593547 2_2:+64470950 Msa0264540:CDS
ATCCGTACTGAGGACTTATG+TGG 0.598102 2_2:+64469725 Msa0264540:CDS
ACAGGTGAACTAAAGGGTCA+TGG 0.599263 2_2:+64472189 Msa0264540:exon
TACTCAACCGTCCCAAGACA+AGG 0.600053 2_2:+64471288 Msa0264540:CDS
GCTTCATTTGAGCAATGACA+TGG 0.600466 2_2:-64471416 None:intergenic
CTGACGGGTACGGGTGCCGA+AGG 0.603088 2_2:-64470457 None:intergenic
ATGCCAGGCAGTGATAAACC+TGG 0.604201 2_2:+64470754 Msa0264540:CDS
AGAAGCGAGAAATGGAAGGA+AGG 0.606284 2_2:-64468243 None:intergenic
GTTCATAGTCTTCCAAGTGA+TGG 0.607090 2_2:+64471669 Msa0264540:CDS
ACTAGGTTTATGTGTGGCTA+CGG 0.607112 2_2:-64470698 None:intergenic
AAGGCAAACAACTTGTAGAA+GGG 0.607436 2_2:+64469505 Msa0264540:CDS
AATCGTCTGAATCTAAGAGA+TGG 0.607593 2_2:+64469881 Msa0264540:CDS
TTGATCCAGAAAGTTCGTAA+GGG 0.612802 2_2:-64472120 None:intergenic
CCATGCTGAAGCTAAGTCGA+CGG 0.615019 2_2:-64470618 None:intergenic
TATATGCCGCTAGTCCTCCT+CGG 0.615684 2_2:+64472823 Msa0264540:three_prime_UTR
ATTGAGCGCTGGAAAACTGG+TGG 0.616441 2_2:+64471708 Msa0264540:CDS
CAAATGGAGAACGCTTGCAA+GGG 0.617576 2_2:-64472073 None:intergenic
CTGAAGCTAAGTCGACGGAA+AGG 0.621601 2_2:-64470613 None:intergenic
GTGGCTACGGAGCTCTGGTG+TGG 0.625718 2_2:-64470685 None:intergenic
TTACCAGGTTATTTGGAGAG+GGG 0.628328 2_2:+64469566 Msa0264540:CDS
AGCAAACTGCCATAACTCCA+TGG 0.631309 2_2:+64470843 Msa0264540:CDS
TGATCCACTGGTGAAACCAA+AGG 0.635139 2_2:+64470819 Msa0264540:CDS
ACCGAGAAGCGAGAAATGGA+AGG 0.635174 2_2:-64468247 None:intergenic
GGATCAAGAAACTCCATCGA+GGG 0.636295 2_2:+64472136 Msa0264540:CDS
CTATAGATATCTCATTAGCA+AGG 0.636461 2_2:+64472847 Msa0264540:three_prime_UTR
ATTTCCAGCATTCTCTCCAG+AGG 0.638927 2_2:-64469861 None:intergenic
TTATGTGGTAATTCTAGAAG+GGG 0.645972 2_2:+64469740 Msa0264540:CDS
AGTAGAGCTTGAGACGTCGA+AGG 0.647644 2_2:-64471183 None:intergenic
CGAGTCAGATATGTACAGGA+GGG 0.651401 2_2:-64470313 None:intergenic
CCTAGTTCAGAAAATGTGAG+AGG 0.652170 2_2:+64470715 Msa0264540:CDS
GCGAGTCAGATATGTACAGG+AGG 0.652877 2_2:-64470314 None:intergenic
ACTGGTGGATCCTGTGATTG+CGG 0.654665 2_2:+64471723 Msa0264540:CDS
AAGAATTGGACAAGGACCAG+AGG 0.656618 2_2:+64471106 Msa0264540:CDS
GTCACATGACCGGACTTACG+AGG 0.659708 2_2:+64470039 Msa0264540:CDS
TGGAAGGAAGGAAAGAGTGT+CGG 0.660642 2_2:-64468231 None:intergenic
CAGCGCTCAATAAGCGACGA+AGG 0.662885 2_2:-64471696 None:intergenic
CCATCGAGGGAAAGAATCAG+GGG 0.663335 2_2:+64472149 Msa0264540:CDS
TACCACATAAGTCCTCAGTA+CGG 0.668158 2_2:-64469727 None:intergenic
TTCAAATAGCCAGAACCGTG+TGG 0.669064 2_2:+64471461 Msa0264540:CDS
TATAGACCGAGGAGGACTAG+CGG 0.674139 2_2:-64472829 None:intergenic
TCTGTGGTTACAAATAAGAG+TGG 0.675902 2_2:+64471042 Msa0264540:CDS
AATTTAAGAGAACAAAGTAG+TGG 0.681012 2_2:+64470124 Msa0264540:CDS
CAATTCCGCAGTGTTAACTG+TGG 0.681722 2_2:-64471139 None:intergenic
AGATCTATTACAGGTAACAG+TGG 0.682338 2_2:+64471632 Msa0264540:CDS
ATCAACTTCTATCCGTACTG+AGG 0.683242 2_2:+64469715 Msa0264540:CDS
AAAGATTCAGAAAATGCGAG+AGG 0.687291 2_2:+64470877 Msa0264540:CDS
CTTCCAACTGGAGAGACAGG+AGG 0.690282 2_2:-64472249 None:intergenic
GAGCTTCGGCTACTTCTGGG+GGG 0.691853 2_2:-64469674 None:intergenic
TAGCAAGGATGATTGTACCA+AGG 0.699607 2_2:+64472862 Msa0264540:three_prime_UTR
GGTGGATCCTGTGATTGCGG+AGG 0.700883 2_2:+64471726 Msa0264540:CDS
GGAAGTCGGACAAATAACAC+AGG 0.702519 2_2:+64471366 Msa0264540:CDS
TCGTGAAGTTACCAAAGACG+AGG 0.707711 2_2:+64469448 Msa0264540:CDS
GAGATATCTATAGACCGAGG+AGG 0.710652 2_2:-64472837 None:intergenic
GTAACAGTGGTGCTTCCAAG+CGG 0.717660 2_2:+64471645 Msa0264540:CDS
AATGAGATATCTATAGACCG+AGG 0.718687 2_2:-64472840 None:intergenic
TGGATCAAGAAACTCCATCG+AGG 0.728422 2_2:+64472135 Msa0264540:CDS
AAAGCAAGGAGATACTCAGG+TGG 0.728467 2_2:+64471524 Msa0264540:CDS
GGTTGAGTACTTCACTGTGG+CGG 0.740443 2_2:-64471274 None:intergenic
GACGGTTGAGTACTTCACTG+TGG 0.749312 2_2:-64471277 None:intergenic
AAACTGCCATAACTCCATGG+AGG 0.775149 2_2:+64470846 Msa0264540:CDS
TTGTTCCACAGTTAACACTG+CGG 0.775387 2_2:+64471134 Msa0264540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAACTGAAATTTATT+TGG + chr2_2:64469270-64469289 Msa0264540:five_prime_UTR 10.0%
!! TACAAAAACAAAACAAAAAA+TGG - chr2_2:64468399-64468418 None:intergenic 15.0%
!! AATTAAAAATGAATAATGCA+GGG - chr2_2:64468516-64468535 None:intergenic 15.0%
!! AAATTAAAAATGAATAATGC+AGG - chr2_2:64468517-64468536 None:intergenic 15.0%
!!! ATTTTAGCTTATGTGATTTT+CGG + chr2_2:64468484-64468503 Msa0264540:intron 20.0%
!!! CTATTAGTATCAGATTTTTT+AGG + chr2_2:64468634-64468653 Msa0264540:intron 20.0%
!!! TTTTGTTTGTTTTTGTTTTG+TGG + chr2_2:64468813-64468832 Msa0264540:intron 20.0%
!! CATATTAATCAAATATTGAG+TGG - chr2_2:64468950-64468969 None:intergenic 20.0%
!! CACTCAATATTTGATTAATA+TGG + chr2_2:64468948-64468967 Msa0264540:intron 20.0%
!! AGTTAAGAATCTTATCAAAA+AGG + chr2_2:64469082-64469101 Msa0264540:intron 20.0%
!! TCAAAAAGGAAATAATAATG+TGG + chr2_2:64469096-64469115 Msa0264540:intron 20.0%
!! CAAAAAGGAAATAATAATGT+GGG + chr2_2:64469097-64469116 Msa0264540:intron 20.0%
!!! GTTTATGAAATCTTTGTTTT+TGG + chr2_2:64469200-64469219 Msa0264540:intron 20.0%
!! AAATTTATTTGGAAGACAAA+AGG + chr2_2:64469281-64469300 Msa0264540:five_prime_UTR 20.0%
!! AATTTATTTGGAAGACAAAA+GGG + chr2_2:64469282-64469301 Msa0264540:five_prime_UTR 20.0%
!! ATGTTTATCTAACTGATATT+AGG + chr2_2:64469328-64469347 Msa0264540:five_prime_UTR 20.0%
!! TTTACATCCACATATTATTA+AGG + chr2_2:64470003-64470022 Msa0264540:CDS 20.0%
!!! CTCTTTCTGAAATAAATTTA+TGG - chr2_2:64471022-64471041 None:intergenic 20.0%
!!! TCTATACTTTTTTCACATTT+AGG + chr2_2:64471325-64471344 Msa0264540:CDS 20.0%
!!! CTATACTTTTTTCACATTTA+GGG + chr2_2:64471326-64471345 Msa0264540:CDS 20.0%
!! TATTGTAGATTAATCTTAGT+TGG + chr2_2:64471902-64471921 Msa0264540:intron 20.0%
!!! GTAAATTGCATTTTATCTTT+TGG + chr2_2:64472456-64472475 Msa0264540:three_prime_UTR 20.0%
!! ACTCTAATTACATGATTTAT+TGG - chr2_2:64472513-64472532 None:intergenic 20.0%
!! GATTTACCAAAATTTACATA+TGG - chr2_2:64472651-64472670 None:intergenic 20.0%
!!! TGTAAATTTTGGTAAATCAT+TGG + chr2_2:64472653-64472672 Msa0264540:three_prime_UTR 20.0%
! AAAGCTAAAATGTGATTTGA+AGG - chr2_2:64468275-64468294 None:intergenic 25.0%
!!! TTTTTAGCAATTTCCAAACA+AGG + chr2_2:64468343-64468362 Msa0264540:intron 25.0%
! TGGAAAAAATAACAGAACAA+CGG - chr2_2:64468379-64468398 None:intergenic 25.0%
! AATCACATAAGCTAAAATTG+CGG - chr2_2:64468482-64468501 None:intergenic 25.0%
!! GAAAAGTGTACGTTAATTAA+TGG - chr2_2:64468557-64468576 None:intergenic 25.0%
! AAAAAAGAGAAAATCCAACA+GGG - chr2_2:64468743-64468762 None:intergenic 25.0%
! GTTTATGAGTTTCATTTGAT+CGG - chr2_2:64468774-64468793 None:intergenic 25.0%
! ATCAAATGAAACTCATAAAC+AGG + chr2_2:64468774-64468793 Msa0264540:intron 25.0%
!!! TTTGTTTTTGTTTTGTGGAA+AGG + chr2_2:64468818-64468837 Msa0264540:intron 25.0%
!!! TTGTTTTTGTTTTGTGGAAA+GGG + chr2_2:64468819-64468838 Msa0264540:intron 25.0%
!!! GATTAATATGGTTTTGTAGT+TGG + chr2_2:64468960-64468979 Msa0264540:intron 25.0%
! TTCATGTGATTATTCAAATG+AGG + chr2_2:64469038-64469057 Msa0264540:intron 25.0%
! ATGAGGAAACAAATCTAATA+TGG + chr2_2:64469055-64469074 Msa0264540:intron 25.0%
! TGAGGAAACAAATCTAATAT+GGG + chr2_2:64469056-64469075 Msa0264540:intron 25.0%
! TGATCAAATGGAAAAGAAAA+AGG + chr2_2:64470099-64470118 Msa0264540:CDS 25.0%
! GATCAAATGGAAAAGAAAAA+GGG + chr2_2:64470100-64470119 Msa0264540:CDS 25.0%
! ATCAAATGGAAAAGAAAAAG+GGG + chr2_2:64470101-64470120 Msa0264540:CDS 25.0%
! AATTTAAGAGAACAAAGTAG+TGG + chr2_2:64470124-64470143 Msa0264540:CDS 25.0%
! CTAGGTAATATAAGAACAAT+TGG - chr2_2:64470184-64470203 None:intergenic 25.0%
!!! TACAGTGATTGTTTTTATGA+GGG - chr2_2:64470213-64470232 None:intergenic 25.0%
!! CAAATAATCTTGTTTGACTA+TGG - chr2_2:64470279-64470298 None:intergenic 25.0%
!!! AACAGGAATTTTGAAACTTT+CGG - chr2_2:64470422-64470441 None:intergenic 25.0%
! GAAATAAATTTATGGAGTGA+TGG - chr2_2:64471014-64471033 None:intergenic 25.0%
! TATACTACCTGAAAAAGAAT+TGG + chr2_2:64471092-64471111 Msa0264540:CDS 25.0%
! TTAAAAAGAAGAATGGAAGT+CGG + chr2_2:64471352-64471371 Msa0264540:CDS 25.0%
!! TTTTCTGTAAAACTAAAGCA+AGG + chr2_2:64471510-64471529 Msa0264540:CDS 25.0%
! AGATTAATCTACAATATGCT+AGG - chr2_2:64471898-64471917 None:intergenic 25.0%
! AAATGGGAAAAATTGAAAAC+AGG - chr2_2:64472010-64472029 None:intergenic 25.0%
!! TGAGTTCCATATGTAAATTT+TGG + chr2_2:64472642-64472661 Msa0264540:three_prime_UTR 25.0%
! ACATTTTGGATTGAAGTTAG+TGG + chr2_2:64468119-64468138 Msa0264540:five_prime_UTR 30.0%
TAACAGAACAACGGAAAAAT+AGG - chr2_2:64468370-64468389 None:intergenic 30.0%
GATTATAAAACAAACGGTAG+TGG - chr2_2:64468455-64468474 None:intergenic 30.0%
GGAAGCGATTATAAAACAAA+CGG - chr2_2:64468461-64468480 None:intergenic 30.0%
! TAATTTGTGCTATTCTTGAG+AGG + chr2_2:64468581-64468600 Msa0264540:intron 30.0%
GAAAAAAGAGAAAATCCAAC+AGG - chr2_2:64468744-64468763 None:intergenic 30.0%
TAGAACTGAGTTCAATTCTT+GGG - chr2_2:64468894-64468913 None:intergenic 30.0%
!! AAGGTTTTTCGAATCAACAA+AGG + chr2_2:64469486-64469505 Msa0264540:CDS 30.0%
GAAAACTTTACCAGGTTATT+TGG + chr2_2:64469559-64469578 Msa0264540:CDS 30.0%
ACTTATGTGGTAATTCTAGA+AGG + chr2_2:64469738-64469757 Msa0264540:CDS 30.0%
! CTTATGTGGTAATTCTAGAA+GGG + chr2_2:64469739-64469758 Msa0264540:CDS 30.0%
! TTATGTGGTAATTCTAGAAG+GGG + chr2_2:64469740-64469759 Msa0264540:CDS 30.0%
ATATACTAGTAGGATGGTTT+CGG - chr2_2:64469961-64469980 None:intergenic 30.0%
CTTTCAATATACTAGTAGGA+TGG - chr2_2:64469967-64469986 None:intergenic 30.0%
CATCCTACTAGTATATTGAA+AGG + chr2_2:64469965-64469984 Msa0264540:CDS 30.0%
GAACCTTTCAATATACTAGT+AGG - chr2_2:64469971-64469990 None:intergenic 30.0%
CCACTTTCCTTAATAATATG+TGG - chr2_2:64470013-64470032 None:intergenic 30.0%
CCACATATTATTAAGGAAAG+TGG + chr2_2:64470010-64470029 Msa0264540:CDS 30.0%
TTAATGCACATGATATGCTT+GGG + chr2_2:64470149-64470168 Msa0264540:CDS 30.0%
!!! CTACAGTGATTGTTTTTATG+AGG - chr2_2:64470214-64470233 None:intergenic 30.0%
!!! TTCTACTTTTTCAGAACCTT+CGG + chr2_2:64470441-64470460 Msa0264540:CDS 30.0%
!! TATGTTGGTTCAAACATTTC+AGG + chr2_2:64470901-64470920 Msa0264540:CDS 30.0%
TTTATTTCAGAAAGAGTCTG+TGG + chr2_2:64471026-64471045 Msa0264540:CDS 30.0%
!!! TTCTTTTTCAGGTAGTATAG+TGG - chr2_2:64471091-64471110 None:intergenic 30.0%
!!! TACTTTTTTCACATTTAGGG+AGG + chr2_2:64471329-64471348 Msa0264540:CDS 30.0%
AATAACACAGGAAAAAGCAA+AGG + chr2_2:64471378-64471397 Msa0264540:CDS 30.0%
TGAATGTCAAGATCTATTAC+AGG + chr2_2:64471623-64471642 Msa0264540:CDS 30.0%
TCTCTTCCATTGAATTAAGT+TGG + chr2_2:64471864-64471883 Msa0264540:intron 30.0%
GGATAACCAACTTAATTCAA+TGG - chr2_2:64471873-64471892 None:intergenic 30.0%
TAATCTACAATATGCTAGGA+AGG - chr2_2:64471894-64471913 None:intergenic 30.0%
AAGCTATGAATGCTAAATAC+AGG + chr2_2:64471958-64471977 Msa0264540:intron 30.0%
AGCTATGAATGCTAAATACA+GGG + chr2_2:64471959-64471978 Msa0264540:intron 30.0%
! AATTTTTCCCATTTTGAACC+TGG + chr2_2:64472016-64472035 Msa0264540:CDS 30.0%
ATATACTCCAGGTTCAAAAT+GGG - chr2_2:64472026-64472045 None:intergenic 30.0%
AATATACTCCAGGTTCAAAA+TGG - chr2_2:64472027-64472046 None:intergenic 30.0%
! TTGGAAGGGTCTAAATTTTA+TGG + chr2_2:64472265-64472284 Msa0264540:three_prime_UTR 30.0%
! CAAATATTTGCTGCACTAAA+TGG - chr2_2:64472318-64472337 None:intergenic 30.0%
!! ATTAGAGTCGTTTTATCGAA+TGG + chr2_2:64472525-64472544 Msa0264540:three_prime_UTR 30.0%
!! TTAGAGTCGTTTTATCGAAT+GGG + chr2_2:64472526-64472545 Msa0264540:three_prime_UTR 30.0%
!! TTGAACTCAACTCTAAGATT+CGG - chr2_2:64472682-64472701 None:intergenic 30.0%
ACGTACTTTCAGTTTATGAT+TGG + chr2_2:64472703-64472722 Msa0264540:three_prime_UTR 30.0%
!! ATTCGTACACCATTGATTTA+CGG + chr2_2:64472750-64472769 Msa0264540:three_prime_UTR 30.0%
ATGTACTTTCCGTAAATCAA+TGG - chr2_2:64472762-64472781 None:intergenic 30.0%
! TGATTTACGGAAAGTACATT+TGG + chr2_2:64472763-64472782 Msa0264540:three_prime_UTR 30.0%
CTATAGATATCTCATTAGCA+AGG + chr2_2:64472847-64472866 Msa0264540:three_prime_UTR 30.0%
! TCAACAACTCTCACACATTT+TGG + chr2_2:64468105-64468124 Msa0264540:five_prime_UTR 35.0%
AACAGGGTAGTTAATCACAA+TGG - chr2_2:64468727-64468746 None:intergenic 35.0%
ATTGTGATTAACTACCCTGT+TGG + chr2_2:64468726-64468745 Msa0264540:intron 35.0%
!!! TTTTGTTTTGTGGAAAGGGT+AGG + chr2_2:64468823-64468842 Msa0264540:intron 35.0%
GTAGAACTGAGTTCAATTCT+TGG - chr2_2:64468895-64468914 None:intergenic 35.0%
! CTACTGAATGATTCGTCTTT+TGG + chr2_2:64468911-64468930 Msa0264540:intron 35.0%
!! TAATGTGGGATTAGTTGTAG+AGG + chr2_2:64469111-64469130 Msa0264540:intron 35.0%
!!! CAAAAGGGTATTTTCAAAGC+TGG + chr2_2:64469297-64469316 Msa0264540:five_prime_UTR 35.0%
! TATTTTCAAAGCTGGTGCAT+TGG + chr2_2:64469305-64469324 Msa0264540:five_prime_UTR 35.0%
ATGAGTAGAAAACCTGTTGA+TGG + chr2_2:64469383-64469402 Msa0264540:CDS 35.0%
TGAGTAGAAAACCTGTTGAT+GGG + chr2_2:64469384-64469403 Msa0264540:CDS 35.0%
! TACGACAAAGAAGAGTTTTC+AGG - chr2_2:64469416-64469435 None:intergenic 35.0%
GAGGCAGACAAATCTTTAAA+AGG + chr2_2:64469467-64469486 Msa0264540:CDS 35.0%
AAAGGCAAACAACTTGTAGA+AGG + chr2_2:64469504-64469523 Msa0264540:CDS 35.0%
AAGGCAAACAACTTGTAGAA+GGG + chr2_2:64469505-64469524 Msa0264540:CDS 35.0%
AAGCACATGAAAACTTTACC+AGG + chr2_2:64469551-64469570 Msa0264540:CDS 35.0%
TTTACCAGGTTATTTGGAGA+GGG + chr2_2:64469565-64469584 Msa0264540:CDS 35.0%
TACTAGAAGATGTTGAGCTT+CGG - chr2_2:64469691-64469710 None:intergenic 35.0%
! ATTCTAGAAGGGGTCTAAAT+TGG + chr2_2:64469750-64469769 Msa0264540:CDS 35.0%
AGGATCTGACAGCTATATAA+TGG - chr2_2:64469844-64469863 None:intergenic 35.0%
AATCGTCTGAATCTAAGAGA+TGG + chr2_2:64469881-64469900 Msa0264540:CDS 35.0%
ACATACAGCGAAAAAATGTC+CGG + chr2_2:64469918-64469937 Msa0264540:CDS 35.0%
TATACTAGTAGGATGGTTTC+GGG - chr2_2:64469960-64469979 None:intergenic 35.0%
! GTATATTGAAAGGTTCTGAC+AGG + chr2_2:64469975-64469994 Msa0264540:CDS 35.0%
GTTAATGCACATGATATGCT+TGG + chr2_2:64470148-64470167 Msa0264540:CDS 35.0%
! TTTTTATGAGGGTTGTCTCT+AGG - chr2_2:64470202-64470221 None:intergenic 35.0%
TGACTTTCTCTAAGTTCATC+TGG - chr2_2:64470364-64470383 None:intergenic 35.0%
! TTTGAAACTTTCGGCATCAA+TGG - chr2_2:64470413-64470432 None:intergenic 35.0%
!! GGTTCTGAAAAAGTAGAAAC+AGG - chr2_2:64470439-64470458 None:intergenic 35.0%
! GTTTCTCAGTAGTTACTTTC+TGG - chr2_2:64470579-64470598 None:intergenic 35.0%
GGCTTCACAAATAAAGTTTC+TGG + chr2_2:64470640-64470659 Msa0264540:CDS 35.0%
!! TAAAGTTTCTGGCTGTAAAG+AGG + chr2_2:64470651-64470670 Msa0264540:CDS 35.0%
TTCTGAACTAGGTTTATGTG+TGG - chr2_2:64470707-64470726 None:intergenic 35.0%
AAAGATTCAGAAAATGCGAG+AGG + chr2_2:64470877-64470896 Msa0264540:CDS 35.0%
AACATTTCAGGCAACAAATC+AGG + chr2_2:64470913-64470932 Msa0264540:CDS 35.0%
GATCAAGTAACCTCCTTAAA+GGG - chr2_2:64470963-64470982 None:intergenic 35.0%
TCTGTGGTTACAAATAAGAG+TGG + chr2_2:64471042-64471061 Msa0264540:CDS 35.0%
TGGTTACAAATAAGAGTGGT+AGG + chr2_2:64471046-64471065 Msa0264540:CDS 35.0%
ACCTGAAAAAGAATTGGACA+AGG + chr2_2:64471098-64471117 Msa0264540:CDS 35.0%
! TCCTTGTCCAATTCTTTTTC+AGG - chr2_2:64471102-64471121 None:intergenic 35.0%
CTGAGAATATCCATGAAGAA+TGG + chr2_2:64471204-64471223 Msa0264540:CDS 35.0%
CCAACAGCAAATGTAAAAAG+GGG - chr2_2:64471234-64471253 None:intergenic 35.0%
GCCAACAGCAAATGTAAAAA+GGG - chr2_2:64471235-64471254 None:intergenic 35.0%
TGCCAACAGCAAATGTAAAA+AGG - chr2_2:64471236-64471255 None:intergenic 35.0%
AGGGAGGTTAAAAAGAAGAA+TGG + chr2_2:64471345-64471364 Msa0264540:CDS 35.0%
TGCGTATAACTGATAGCTTT+GGG - chr2_2:64471597-64471616 None:intergenic 35.0%
ATGCGTATAACTGATAGCTT+TGG - chr2_2:64471598-64471617 None:intergenic 35.0%
AGATCTATTACAGGTAACAG+TGG + chr2_2:64471632-64471651 Msa0264540:CDS 35.0%
TCTGCACGTTTGATTATTGT+TGG - chr2_2:64471784-64471803 None:intergenic 35.0%
TCAATGGAAGAGAAAATACC+TGG - chr2_2:64471857-64471876 None:intergenic 35.0%
GCTATGAATGCTAAATACAG+GGG + chr2_2:64471960-64471979 Msa0264540:intron 35.0%
GGGAAAAATTGAAAACAGGA+CGG - chr2_2:64472006-64472025 None:intergenic 35.0%
AAAGCTACTGAATATACTCC+AGG - chr2_2:64472037-64472056 None:intergenic 35.0%
! GGAGTATATTCAGTAGCTTT+TGG + chr2_2:64472037-64472056 Msa0264540:CDS 35.0%
TTGATCCAGAAAGTTCGTAA+GGG - chr2_2:64472123-64472142 None:intergenic 35.0%
!! GAATCTCTATTGGTTCAAAC+AGG + chr2_2:64472171-64472190 Msa0264540:CDS 35.0%
GTTCAAACAGGTGAACTAAA+GGG + chr2_2:64472183-64472202 Msa0264540:exon 35.0%
AAAATTTAGACCCTTCCAAC+TGG - chr2_2:64472264-64472283 None:intergenic 35.0%
!! TCATTTTTGTCTCATTCACC+TGG + chr2_2:64472483-64472502 Msa0264540:three_prime_UTR 35.0%
ACATGATTTATTGGTCAACC+AGG - chr2_2:64472504-64472523 None:intergenic 35.0%
GTAAGTGACCACATTCAAAA+TGG + chr2_2:64472548-64472567 Msa0264540:three_prime_UTR 35.0%
!! TCAAGAAGCCATTTTGAATG+TGG - chr2_2:64472559-64472578 None:intergenic 35.0%
TACTAAGCCTGATTTCCAAA+AGG + chr2_2:64472608-64472627 Msa0264540:three_prime_UTR 35.0%
ACTAAGCCTGATTTCCAAAA+GGG + chr2_2:64472609-64472628 Msa0264540:three_prime_UTR 35.0%
AATGAGATATCTATAGACCG+AGG - chr2_2:64472843-64472862 None:intergenic 35.0%
TGTACCAAGGCATATTAATC+TGG + chr2_2:64472875-64472894 Msa0264540:three_prime_UTR 35.0%
!! GTTACGACGTCGTTTTCTAA+CGG + chr2_2:64468206-64468225 Msa0264540:five_prime_UTR 40.0%
CGGAAAAATAGGACCTTGTT+TGG - chr2_2:64468359-64468378 None:intergenic 40.0%
!!! AACTCAAGTGGAGCGTTTTT+TGG - chr2_2:64468674-64468693 None:intergenic 40.0%
GTTGTAGCTCAAAACTCAAG+TGG - chr2_2:64468686-64468705 None:intergenic 40.0%
ATGGAGCTCAGAATAGGTAA+AGG - chr2_2:64468708-64468727 None:intergenic 40.0%
ATCACAATGGAGCTCAGAAT+AGG - chr2_2:64468714-64468733 None:intergenic 40.0%
AACTGAGTTCAATTCTTGGG+TGG - chr2_2:64468891-64468910 None:intergenic 40.0%
! CTGAATGATTCGTCTTTTGG+TGG + chr2_2:64468914-64468933 Msa0264540:intron 40.0%
! AACAGGTTTTCTACTCATGC+TGG - chr2_2:64469381-64469400 None:intergenic 40.0%
CTTTACCAGGTTATTTGGAG+AGG + chr2_2:64469564-64469583 Msa0264540:CDS 40.0%
TTACCAGGTTATTTGGAGAG+GGG + chr2_2:64469566-64469585 Msa0264540:CDS 40.0%
CAACATTCAAAGCTTTCTCC+GGG - chr2_2:64469601-64469620 None:intergenic 40.0%
CCAACATTCAAAGCTTTCTC+CGG - chr2_2:64469602-64469621 None:intergenic 40.0%
!! CGGAGAAAGCTTTGAATGTT+GGG + chr2_2:64469600-64469619 Msa0264540:CDS 40.0%
!! GGAGAAAGCTTTGAATGTTG+GGG + chr2_2:64469601-64469620 Msa0264540:CDS 40.0%
ATCAACTTCTATCCGTACTG+AGG + chr2_2:64469715-64469734 Msa0264540:CDS 40.0%
TACCACATAAGTCCTCAGTA+CGG - chr2_2:64469730-64469749 None:intergenic 40.0%
!! AGTGAGATTGCACTGATTGT+GGG - chr2_2:64469799-64469818 None:intergenic 40.0%
ATCAGTGCAATCTCACTCTA+TGG + chr2_2:64469802-64469821 Msa0264540:CDS 40.0%
TATATAGCTGTCAGATCCTC+TGG + chr2_2:64469845-64469864 Msa0264540:CDS 40.0%
GGGAAAGATGATCAATAGTC+CGG - chr2_2:64469940-64469959 None:intergenic 40.0%
TCCTGATATGCAAACAACCT+TGG + chr2_2:64470237-64470256 Msa0264540:CDS 40.0%
TCCAAGGTTGTTTGCATATC+AGG - chr2_2:64470241-64470260 None:intergenic 40.0%
ACAACCTTGGATCAGAAGTT+AGG + chr2_2:64470250-64470269 Msa0264540:CDS 40.0%
! TATGTACAGGAGGGTTGATT+CGG - chr2_2:64470307-64470326 None:intergenic 40.0%
ATTGCGAGTCAGATATGTAC+AGG - chr2_2:64470320-64470339 None:intergenic 40.0%
ACTAGGTTTATGTGTGGCTA+CGG - chr2_2:64470701-64470720 None:intergenic 40.0%
! CCTCTCACATTTTCTGAACT+AGG - chr2_2:64470718-64470737 None:intergenic 40.0%
CCTAGTTCAGAAAATGTGAG+AGG + chr2_2:64470715-64470734 Msa0264540:CDS 40.0%
AGTGATAAACCTGGAAATGC+TGG + chr2_2:64470763-64470782 Msa0264540:CDS 40.0%
GATCAAGGAATCTCCTCAAA+GGG - chr2_2:64470804-64470823 None:intergenic 40.0%
! ATCTTTTTGCGATACCTCCA+TGG - chr2_2:64470863-64470882 None:intergenic 40.0%
GAAAATGCGAGAGGTTATGT+TGG + chr2_2:64470886-64470905 Msa0264540:CDS 40.0%
GGATCAAGTAACCTCCTTAA+AGG - chr2_2:64470964-64470983 None:intergenic 40.0%
ACAAATAAGAGTGGTAGGTC+AGG + chr2_2:64471051-64471070 Msa0264540:CDS 40.0%
TTGTTCCACAGTTAACACTG+CGG + chr2_2:64471134-64471153 Msa0264540:CDS 40.0%
!!! CCCCTTTTTACATTTGCTGT+TGG + chr2_2:64471231-64471250 Msa0264540:CDS 40.0%
AACTGCATTCACCTTGTCTT+GGG - chr2_2:64471302-64471321 None:intergenic 40.0%
GCTTCATTTGAGCAATGACA+TGG - chr2_2:64471419-64471438 None:intergenic 40.0%
! CTTTTGTGATAGAGTCCACA+CGG - chr2_2:64471479-64471498 None:intergenic 40.0%
ACTAAAGCAAGGAGATACTC+AGG + chr2_2:64471521-64471540 Msa0264540:CDS 40.0%
GTTCATAGTCTTCCAAGTGA+TGG + chr2_2:64471669-64471688 Msa0264540:CDS 40.0%
! TCAGTATGAGCTTTTCTTCC+AGG + chr2_2:64471836-64471855 Msa0264540:CDS 40.0%
GTTCTCCATTTGCATTGCAA+TGG + chr2_2:64472084-64472103 Msa0264540:CDS 40.0%
ATCCACCATTGCAATGCAAA+TGG - chr2_2:64472092-64472111 None:intergenic 40.0%
! ATTTGCATTGCAATGGTGGA+TGG + chr2_2:64472091-64472110 Msa0264540:CDS 40.0%
AAACTCCCTTACGAACTTTC+TGG + chr2_2:64472115-64472134 Msa0264540:CDS 40.0%
CTTGATCCAGAAAGTTCGTA+AGG - chr2_2:64472124-64472143 None:intergenic 40.0%
AGAATCAGGGGAATCTCTAT+TGG + chr2_2:64472161-64472180 Msa0264540:CDS 40.0%
GGTTCAAACAGGTGAACTAA+AGG + chr2_2:64472182-64472201 Msa0264540:CDS 40.0%
GTTATTCTTACGTGCTGCAT+AGG + chr2_2:64472358-64472377 Msa0264540:three_prime_UTR 40.0%
!! TCAACTCCCTTTTGGAAATC+AGG - chr2_2:64472618-64472637 None:intergenic 40.0%
! CTCAATTGTCAACTCCCTTT+TGG - chr2_2:64472626-64472645 None:intergenic 40.0%
TGGAACATACGAAGTTGCAA+AGG + chr2_2:64472783-64472802 Msa0264540:three_prime_UTR 40.0%
GTTGCAAAGGTTGAAAAAGC+AGG + chr2_2:64472796-64472815 Msa0264540:three_prime_UTR 40.0%
TAGCAAGGATGATTGTACCA+AGG + chr2_2:64472862-64472881 Msa0264540:three_prime_UTR 40.0%
! AACACTCAACGACGTCGTTT+TGG + chr2_2:64468155-64468174 Msa0264540:five_prime_UTR 45.0%
! TGGAAGGAAGGAAAGAGTGT+CGG - chr2_2:64468234-64468253 None:intergenic 45.0%
AGAAGCGAGAAATGGAAGGA+AGG - chr2_2:64468246-64468265 None:intergenic 45.0%
TCCTTCCATTTCTCGCTTCT+CGG + chr2_2:64468246-64468265 Msa0264540:five_prime_UTR 45.0%
TGTGGAAAGGGTAGGTAGTT+CGG + chr2_2:64468831-64468850 Msa0264540:intron 45.0%
GGGTGGATCAGTTATTTGCA+AGG - chr2_2:64468874-64468893 None:intergenic 45.0%
! CATGCTGGTGGATAACTTTC+AGG - chr2_2:64469366-64469385 None:intergenic 45.0%
! AGGTTTTCTACTCATGCTGG+TGG - chr2_2:64469378-64469397 None:intergenic 45.0%
TCAGGTTTGAACCCATCAAC+AGG - chr2_2:64469398-64469417 None:intergenic 45.0%
TCGTGAAGTTACCAAAGACG+AGG + chr2_2:64469448-64469467 Msa0264540:CDS 45.0%
AGATTTGTCTGCCTCGTCTT+TGG - chr2_2:64469462-64469481 None:intergenic 45.0%
!! CCGGAGAAAGCTTTGAATGT+TGG + chr2_2:64469599-64469618 Msa0264540:CDS 45.0%
TGAATGTTGGGGTCCTTGAT+TGG + chr2_2:64469612-64469631 Msa0264540:CDS 45.0%
ATCCGTACTGAGGACTTATG+TGG + chr2_2:64469725-64469744 Msa0264540:CDS 45.0%
! ATTGGTCTCCTTCTCGTCAA+AGG + chr2_2:64469768-64469787 Msa0264540:CDS 45.0%
GGGATTATCCTTTGACGAGA+AGG - chr2_2:64469779-64469798 None:intergenic 45.0%
!! GAGTGAGATTGCACTGATTG+TGG - chr2_2:64469800-64469819 None:intergenic 45.0%
ATTTCCAGCATTCTCTCCAG+AGG - chr2_2:64469864-64469883 None:intergenic 45.0%
GAGCACGCAAGATGATCAAA+TGG + chr2_2:64470087-64470106 Msa0264540:CDS 45.0%
GCTTCCTAACTTCTGATCCA+AGG - chr2_2:64470257-64470276 None:intergenic 45.0%
CGAGTCAGATATGTACAGGA+GGG - chr2_2:64470316-64470335 None:intergenic 45.0%
TCTCTAAGTTCATCTGGCAG+AGG - chr2_2:64470358-64470377 None:intergenic 45.0%
ACTAGGTTGTGACTCTTGCT+GGG - chr2_2:64470389-64470408 None:intergenic 45.0%
AACTAGGTTGTGACTCTTGC+TGG - chr2_2:64470390-64470409 None:intergenic 45.0%
CTTTCGGCATCAATGGAACT+AGG - chr2_2:64470406-64470425 None:intergenic 45.0%
TGGACTCATTCCCATTCTGA+CGG - chr2_2:64470476-64470495 None:intergenic 45.0%
GAGTCCATGCAGATCTAGAA+AGG + chr2_2:64470489-64470508 Msa0264540:CDS 45.0%
! ACTTTCTGGTCTACTTCCGT+AGG - chr2_2:64470565-64470584 None:intergenic 45.0%
TTTCCAGGTTTATCACTGCC+TGG - chr2_2:64470760-64470779 None:intergenic 45.0%
!!! CTGTTTTTGCCAGCATTTCC+AGG - chr2_2:64470775-64470794 None:intergenic 45.0%
CTGGAAATGCTGGCAAAAAC+AGG + chr2_2:64470773-64470792 Msa0264540:CDS 45.0%
GGATCAAGGAATCTCCTCAA+AGG - chr2_2:64470805-64470824 None:intergenic 45.0%
TTGGTTTCACCAGTGGATCA+AGG - chr2_2:64470819-64470838 None:intergenic 45.0%
TGATCCACTGGTGAAACCAA+AGG + chr2_2:64470819-64470838 Msa0264540:CDS 45.0%
!! TTATGGCAGTTTGCTGCCTT+TGG - chr2_2:64470838-64470857 None:intergenic 45.0%
AGCAAACTGCCATAACTCCA+TGG + chr2_2:64470843-64470862 Msa0264540:CDS 45.0%
AAACTGCCATAACTCCATGG+AGG + chr2_2:64470846-64470865 Msa0264540:CDS 45.0%
AAGTAACCTCCTTAAAGGGC+TGG - chr2_2:64470959-64470978 None:intergenic 45.0%
TGATCCACTGCTGAAACCTA+AGG + chr2_2:64470978-64470997 Msa0264540:CDS 45.0%
AAGAGTGGTAGGTCAGGTAA+TGG + chr2_2:64471057-64471076 Msa0264540:CDS 45.0%
AGAGTGGTAGGTCAGGTAAT+GGG + chr2_2:64471058-64471077 Msa0264540:CDS 45.0%
AAGAATTGGACAAGGACCAG+AGG + chr2_2:64471106-64471125 Msa0264540:CDS 45.0%
CAATTCCGCAGTGTTAACTG+TGG - chr2_2:64471142-64471161 None:intergenic 45.0%
CAACTGCATTCACCTTGTCT+TGG - chr2_2:64471303-64471322 None:intergenic 45.0%
GGAAGTCGGACAAATAACAC+AGG + chr2_2:64471366-64471385 Msa0264540:CDS 45.0%
ATGACATGGCGAACGTAATC+AGG - chr2_2:64471405-64471424 None:intergenic 45.0%
TTCAAATAGCCAGAACCGTG+TGG + chr2_2:64471461-64471480 Msa0264540:CDS 45.0%
AAAGCAAGGAGATACTCAGG+TGG + chr2_2:64471524-64471543 Msa0264540:CDS 45.0%
CATAGTCTTCCAAGTGATGG+TGG + chr2_2:64471672-64471691 Msa0264540:CDS 45.0%
!! CTTATTGAGCGCTGGAAAAC+TGG + chr2_2:64471705-64471724 Msa0264540:CDS 45.0%
CAAATGGAGAACGCTTGCAA+GGG - chr2_2:64472076-64472095 None:intergenic 45.0%
CTCCATTTGCATTGCAATGG+TGG + chr2_2:64472087-64472106 Msa0264540:CDS 45.0%
TGGATCAAGAAACTCCATCG+AGG + chr2_2:64472135-64472154 Msa0264540:CDS 45.0%
GGATCAAGAAACTCCATCGA+GGG + chr2_2:64472136-64472155 Msa0264540:CDS 45.0%
TCCATCGAGGGAAAGAATCA+GGG + chr2_2:64472148-64472167 Msa0264540:CDS 45.0%
ACAGGTGAACTAAAGGGTCA+TGG + chr2_2:64472189-64472208 Msa0264540:exon 45.0%
GATCGAGTTATGAGCTTGCA+AGG - chr2_2:64472390-64472409 None:intergenic 45.0%
GAGATATCTATAGACCGAGG+AGG - chr2_2:64472840-64472859 None:intergenic 45.0%
!! ATATATTAATATCAAATAAA+GGG - chr2_2:64469140-64469159 None:intergenic 5.0%
!! AATATATTAATATCAAATAA+AGG - chr2_2:64469141-64469160 None:intergenic 5.0%
ACCGAGAAGCGAGAAATGGA+AGG - chr2_2:64468250-64468269 None:intergenic 50.0%
GGTTACCGAGAAGCGAGAAA+TGG - chr2_2:64468254-64468273 None:intergenic 50.0%
TCTCCCCTCTCCAAATAACC+TGG - chr2_2:64469572-64469591 None:intergenic 50.0%
GGAGAGGGGAGAAAAAATCC+CGG + chr2_2:64469580-64469599 Msa0264540:CDS 50.0%
! GTTCCAGACTGGTCCAATCA+AGG - chr2_2:64469628-64469647 None:intergenic 50.0%
! ATTGGACCAGTCTGGAACGT+TGG + chr2_2:64469630-64469649 Msa0264540:CDS 50.0%
TTGAGCTTCGGCTACTTCTG+GGG - chr2_2:64469679-64469698 None:intergenic 50.0%
GTTGAGCTTCGGCTACTTCT+GGG - chr2_2:64469680-64469699 None:intergenic 50.0%
TGTTGAGCTTCGGCTACTTC+TGG - chr2_2:64469681-64469700 None:intergenic 50.0%
! AGATCCTCTGGAGAGAATGC+TGG + chr2_2:64469857-64469876 Msa0264540:CDS 50.0%
GTGGCATCTTGTCACATGAC+CGG + chr2_2:64470029-64470048 Msa0264540:CDS 50.0%
GGCAGCTTCACATGCTAAGT+TGG + chr2_2:64470060-64470079 Msa0264540:CDS 50.0%
GCGAGTCAGATATGTACAGG+AGG - chr2_2:64470317-64470336 None:intergenic 50.0%
AAGTTCATCTGGCAGAGGAC+AGG - chr2_2:64470353-64470372 None:intergenic 50.0%
! ATTCCCATTCTGACGGGTAC+GGG - chr2_2:64470469-64470488 None:intergenic 50.0%
! CATTCCCATTCTGACGGGTA+CGG - chr2_2:64470470-64470489 None:intergenic 50.0%
GGACTCATTCCCATTCTGAC+GGG - chr2_2:64470475-64470494 None:intergenic 50.0%
TCGGCCTTTCTAGATCTGCA+TGG - chr2_2:64470496-64470515 None:intergenic 50.0%
ATGCAGATCTAGAAAGGCCG+AGG + chr2_2:64470495-64470514 Msa0264540:CDS 50.0%
GATCTAGAAAGGCCGAGGAA+AGG + chr2_2:64470500-64470519 Msa0264540:CDS 50.0%
AACAGTGCGCTTCCTTTCCT+CGG - chr2_2:64470515-64470534 None:intergenic 50.0%
CTCTGCAAATGCACCTCCTA+CGG + chr2_2:64470546-64470565 Msa0264540:CDS 50.0%
TTCTGGTCTACTTCCGTAGG+AGG - chr2_2:64470562-64470581 None:intergenic 50.0%
CGGAAAGGTGAAGAGCTTCT+TGG - chr2_2:64470601-64470620 None:intergenic 50.0%
CTGAAGCTAAGTCGACGGAA+AGG - chr2_2:64470616-64470635 None:intergenic 50.0%
CCATGCTGAAGCTAAGTCGA+CGG - chr2_2:64470621-64470640 None:intergenic 50.0%
!! CGTCGACTTAGCTTCAGCAT+GGG + chr2_2:64470619-64470638 Msa0264540:CDS 50.0%
CATGCTAGCTCAAACATGCC+AGG + chr2_2:64470739-64470758 Msa0264540:CDS 50.0%
ATGCCAGGCAGTGATAAACC+TGG + chr2_2:64470754-64470773 Msa0264540:CDS 50.0%
AAAACAGGTCCAGCCCTTTG+AGG + chr2_2:64470788-64470807 Msa0264540:CDS 50.0%
AAGGAATCTCCTCAAAGGGC+TGG - chr2_2:64470800-64470819 None:intergenic 50.0%
GAGGAGATTCCTTGATCCAC+TGG + chr2_2:64470807-64470826 Msa0264540:CDS 50.0%
GCGATACCTCCATGGAGTTA+TGG - chr2_2:64470855-64470874 None:intergenic 50.0%
AAAGCAGGTCCAGCCCTTTA+AGG + chr2_2:64470947-64470966 Msa0264540:CDS 50.0%
!! TGATGGCAGTTTGCTGCCTT+AGG - chr2_2:64470997-64471016 None:intergenic 50.0%
TTGGACAAGGACCAGAGGTT+TGG + chr2_2:64471111-64471130 Msa0264540:CDS 50.0%
CTGTGGAACAACCAAACCTC+TGG - chr2_2:64471125-64471144 None:intergenic 50.0%
AGTAGAGCTTGAGACGTCGA+AGG - chr2_2:64471186-64471205 None:intergenic 50.0%
AAGGGGCTGACCATTCTTCA+TGG - chr2_2:64471217-64471236 None:intergenic 50.0%
GGTTGAGTACTTCACTGTGG+CGG - chr2_2:64471277-64471296 None:intergenic 50.0%
GACGGTTGAGTACTTCACTG+TGG - chr2_2:64471280-64471299 None:intergenic 50.0%
TACTCAACCGTCCCAAGACA+AGG + chr2_2:64471288-64471307 Msa0264540:CDS 50.0%
GCATTCACCTTGTCTTGGGA+CGG - chr2_2:64471298-64471317 None:intergenic 50.0%
TGATAGAGTCCACACGGTTC+TGG - chr2_2:64471473-64471492 None:intergenic 50.0%
ATAGCAGCAAGCTCGTCATC+TGG - chr2_2:64471561-64471580 None:intergenic 50.0%
GTAACAGTGGTGCTTCCAAG+CGG + chr2_2:64471645-64471664 Msa0264540:CDS 50.0%
GGAAGACTATGAACTCCGCT+TGG - chr2_2:64471663-64471682 None:intergenic 50.0%
!! ATTGAGCGCTGGAAAACTGG+TGG + chr2_2:64471708-64471727 Msa0264540:CDS 50.0%
! ACTGGTGGATCCTGTGATTG+CGG + chr2_2:64471723-64471742 Msa0264540:CDS 50.0%
ATCCTGTGATTGCGGAGGTT+GGG + chr2_2:64471731-64471750 Msa0264540:CDS 50.0%
TGATTGCGGAGGTTGGGATT+TGG + chr2_2:64471737-64471756 Msa0264540:CDS 50.0%
GCAAATGGAGAACGCTTGCA+AGG - chr2_2:64472077-64472096 None:intergenic 50.0%
CTCCATCGAGGGAAAGAATC+AGG + chr2_2:64472147-64472166 Msa0264540:CDS 50.0%
CCATCGAGGGAAAGAATCAG+GGG + chr2_2:64472149-64472168 Msa0264540:CDS 50.0%
AACTGGAGAGACAGGAGGAT+AGG - chr2_2:64472247-64472266 None:intergenic 50.0%
TATCCTCCTGTCTCTCCAGT+TGG + chr2_2:64472246-64472265 Msa0264540:three_prime_UTR 50.0%
TCCTGTCTCTCCAGTTGGAA+GGG + chr2_2:64472251-64472270 Msa0264540:three_prime_UTR 50.0%
TATATGCCGCTAGTCCTCCT+CGG + chr2_2:64472823-64472842 Msa0264540:three_prime_UTR 50.0%
TATAGACCGAGGAGGACTAG+CGG - chr2_2:64472832-64472851 None:intergenic 50.0%
GGAAAGGGTAGGTAGTTCGG+TGG + chr2_2:64468834-64468853 Msa0264540:intron 55.0%
GGTCCTTGATTGGACCAGTC+TGG + chr2_2:64469622-64469641 Msa0264540:CDS 55.0%
GTACTGCCAACGTTCCAGAC+TGG - chr2_2:64469639-64469658 None:intergenic 55.0%
TGAGCTTCGGCTACTTCTGG+GGG - chr2_2:64469678-64469697 None:intergenic 55.0%
GTCACATGACCGGACTTACG+AGG + chr2_2:64470039-64470058 Msa0264540:CDS 55.0%
GTGAAGCTGCCTCGTAAGTC+CGG - chr2_2:64470051-64470070 None:intergenic 55.0%
!! CCGTCGACTTAGCTTCAGCA+TGG + chr2_2:64470618-64470637 Msa0264540:CDS 55.0%
TATGTGTGGCTACGGAGCTC+TGG - chr2_2:64470693-64470712 None:intergenic 55.0%
! GCTGCCTTTGGTTTCACCAG+TGG - chr2_2:64470826-64470845 None:intergenic 55.0%
! GGCAACAAATCAGGTGCTGC+TGG + chr2_2:64470922-64470941 Msa0264540:CDS 55.0%
!! CAGGTGCTGCTGGTAAAAGC+AGG + chr2_2:64470932-64470951 Msa0264540:CDS 55.0%
GCTGCCTTAGGTTTCAGCAG+TGG - chr2_2:64470985-64471004 None:intergenic 55.0%
GACGAAGGTCCACCATCACT+TGG - chr2_2:64471684-64471703 None:intergenic 55.0%
CAGCGCTCAATAAGCGACGA+AGG - chr2_2:64471699-64471718 None:intergenic 55.0%
CTTCGTCGCTTATTGAGCGC+TGG + chr2_2:64471697-64471716 Msa0264540:CDS 55.0%
GATCCTGTGATTGCGGAGGT+TGG + chr2_2:64471730-64471749 Msa0264540:CDS 55.0%
ATCCCAACCTCCGCAATCAC+AGG - chr2_2:64471736-64471755 None:intergenic 55.0%
CCCCTGATTCTTTCCCTCGA+TGG - chr2_2:64472152-64472171 None:intergenic 55.0%
! GGATAGGCAGCGTAACTTGC+AGG - chr2_2:64472231-64472250 None:intergenic 55.0%
CTTCCAACTGGAGAGACAGG+AGG - chr2_2:64472252-64472271 None:intergenic 55.0%
CTCCTGTCTCTCCAGTTGGA+AGG + chr2_2:64472250-64472269 Msa0264540:three_prime_UTR 55.0%
ACCCTTCCAACTGGAGAGAC+AGG - chr2_2:64472255-64472274 None:intergenic 55.0%
! GGGTAGGTAGTTCGGTGGAG+AGG + chr2_2:64468839-64468858 Msa0264540:intron 60.0%
GAGCTTCGGCTACTTCTGGG+GGG - chr2_2:64469677-64469696 None:intergenic 60.0%
GCACCCGTACCCGTCAGAAT+GGG + chr2_2:64470463-64470482 Msa0264540:CDS 60.0%
! GCAGGTCCAGCCCTTTAAGG+AGG + chr2_2:64470950-64470969 Msa0264540:CDS 60.0%
GGTGGATCCTGTGATTGCGG+AGG + chr2_2:64471726-64471745 Msa0264540:CDS 60.0%
GGCACCCGTACCCGTCAGAA+TGG + chr2_2:64470462-64470481 Msa0264540:CDS 65.0%
! GTGGCTACGGAGCTCTGGTG+TGG - chr2_2:64470688-64470707 None:intergenic 65.0%
!! CTGACGGGTACGGGTGCCGA+AGG - chr2_2:64470460-64470479 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 64468053 64472898 64468053 ID=Msa0264540;Name=Msa0264540
chr2_2 mRNA 64468053 64472898 64468053 ID=Msa0264540-mRNA-1;Parent=Msa0264540;Name=Msa0264540-mRNA-1;_AED=0.07;_eAED=0.07;_QI=349|1|1|1|0.5|0.33|3|697|898
chr2_2 exon 64468053 64468267 64468053 ID=Msa0264540-mRNA-1:exon:20086;Parent=Msa0264540-mRNA-1
chr2_2 exon 64469249 64471857 64469249 ID=Msa0264540-mRNA-1:exon:20087;Parent=Msa0264540-mRNA-1
chr2_2 exon 64471980 64472898 64471980 ID=Msa0264540-mRNA-1:exon:20088;Parent=Msa0264540-mRNA-1
chr2_2 five_prime_UTR 64468053 64468267 64468053 ID=Msa0264540-mRNA-1:five_prime_utr;Parent=Msa0264540-mRNA-1
chr2_2 five_prime_UTR 64469249 64469382 64469249 ID=Msa0264540-mRNA-1:five_prime_utr;Parent=Msa0264540-mRNA-1
chr2_2 CDS 64469383 64471857 64469383 ID=Msa0264540-mRNA-1:cds;Parent=Msa0264540-mRNA-1
chr2_2 CDS 64471980 64472201 64471980 ID=Msa0264540-mRNA-1:cds;Parent=Msa0264540-mRNA-1
chr2_2 three_prime_UTR 64472202 64472898 64472202 ID=Msa0264540-mRNA-1:three_prime_utr;Parent=Msa0264540-mRNA-1
Gene Sequence

>Msa0264540

ATGAGTAGAAAACCTGTTGATGGGTTCAAACCTGAAAACTCTTCTTTGTCGTACGCTGATTTTCATCGTGAAGTTACCAAAGACGAGGCAGACAAATCTTTAAAAGGTTTTTCGAATCAACAAAGGCAAACAACTTGTAGAAGGGAAAATGATGAAGATGAGCTTGTTAAGCACATGAAAACTTTACCAGGTTATTTGGAGAGGGGAGAAAAAATCCCGGAGAAAGCTTTGAATGTTGGGGTCCTTGATTGGACCAGTCTGGAACGTTGGCAGTACAGCAATAAACTTGTACCCCCCAGAAGTAGCCGAAGCTCAACATCTTCTAGTAATACATCAACTTCTATCCGTACTGAGGACTTATGTGGTAATTCTAGAAGGGGTCTAAATTGGTCTCCTTCTCGTCAAAGGATAATCCCACAATCAGTGCAATCTCACTCTATGGCTTCTACAAAGCAAGACCATTATATAGCTGTCAGATCCTCTGGAGAGAATGCTGGAAATCGTCTGAATCTAAGAGATGGCAACAGTAGTATTGACATACAGCGAAAAAATGTCCGGACTATTGATCATCTTTCCCGAAACCATCCTACTAGTATATTGAAAGGTTCTGACAGGAAACATTTACATCCACATATTATTAAGGAAAGTGGCATCTTGTCACATGACCGGACTTACGAGGCAGCTTCACATGCTAAGTTGGAAATGAGCACGCAAGATGATCAAATGGAAAAGAAAAAGGGGAATTTAAGAGAACAAAGTAGTGGTGTTAATGCACATGATATGCTTGGGAAAAGCAAACCAATTGTTCTTATATTACCTAGAGACAACCCTCATAAAAACAATCACTGTAGAGCTCCTGATATGCAAACAACCTTGGATCAGAAGTTAGGAAGCCATAGTCAAACAAGATTATTTGTAAATCCGAATCAACCCTCCTGTACATATCTGACTCGCAATGCTTCACACTCCTGTCCTCTGCCAGATGAACTTAGAGAAAGTCATTCCCAGCAAGAGTCACAACCTAGTTCCATTGATGCCGAAAGTTTCAAAATTCCTGTTTCTACTTTTTCAGAACCTTCGGCACCCGTACCCGTCAGAATGGGAATGAGTCCATGCAGATCTAGAAAGGCCGAGGAAAGGAAGCGCACTGTTGCTGTATCTTGCTCTGCAAATGCACCTCCTACGGAAGTAGACCAGAAAGTAACTACTGAGAAACCAAGAAGCTCTTCACCTTTCCGTCGACTTAGCTTCAGCATGGGCTTCACAAATAAAGTTTCTGGCTGTAAAGAGGTTGCATATGTTCCACACCAGAGCTCCGTAGCCACACATAAACCTAGTTCAGAAAATGTGAGAGGTCATGCTAGCTCAAACATGCCAGGCAGTGATAAACCTGGAAATGCTGGCAAAAACAGGTCCAGCCCTTTGAGGAGATTCCTTGATCCACTGGTGAAACCAAAGGCAGCAAACTGCCATAACTCCATGGAGGTATCGCAAAAAGATTCAGAAAATGCGAGAGGTTATGTTGGTTCAAACATTTCAGGCAACAAATCAGGTGCTGCTGGTAAAAGCAGGTCCAGCCCTTTAAGGAGGTTACTTGATCCACTGCTGAAACCTAAGGCAGCAAACTGCCATCACTCCATAAATTTATTTCAGAAAGAGTCTGTGGTTACAAATAAGAGTGGTAGGTCAGGTAATGGGAAATGTTCCACTATACTACCTGAAAAAGAATTGGACAAGGACCAGAGGTTTGGTTGTTCCACAGTTAACACTGCGGAATTGTCAAGTGAAGAGAAGTATATACCTTCGACGTCTCAAGCTCTACTGAGAATATCCATGAAGAATGGTCAGCCCCTTTTTACATTTGCTGTTGGCAACAATAGCAATATTCTCGCCGCCACAGTGAAGTACTCAACCGTCCCAAGACAAGGTGAATGCAGTTGTATCTATACTTTTTTCACATTTAGGGAGGTTAAAAAGAAGAATGGAAGTCGGACAAATAACACAGGAAAAAGCAAAGGTCCTGATTACGTTCGCCATGTCATTGCTCAAATGAAGCTTTCTGATTTGCACTATGATGATTCAAATAGCCAGAACCGTGTGGACTCTATCACAAAAGAGTTTGTTTTATTTTCTGTAAAACTAAAGCAAGGAGATACTCAGGTGGCTGACTATCAGCCAGATGACGAGCTTGCTGCTATAGTTGTCAAATCACCCAAAGCTATCAGTTATACGCATCAGCATGAATGTCAAGATCTATTACAGGTAACAGTGGTGCTTCCAAGCGGAGTTCATAGTCTTCCAAGTGATGGTGGACCTTCGTCGCTTATTGAGCGCTGGAAAACTGGTGGATCCTGTGATTGCGGAGGTTGGGATTTGGCTTGTAAGCTAAAAATTCTTGCCAACAATAATCAAACGTGCAGAAAATCAAGAACATCAGAAGCTTATTTTGCAGATCAGTATGAGCTTTTCTTCCAGGGGACTGAACAATGTCAAGATAACCGTCCTGTTTTCAATTTTTCCCATTTTGAACCTGGAGTATATTCAGTAGCTTTTGGTTCATCACTTTCACCCTTGCAAGCGTTCTCCATTTGCATTGCAATGGTGGATGGCAAACTCCCTTACGAACTTTCTGGATCAAGAAACTCCATCGAGGGAAAGAATCAGGGGAATCTCTATTGGTTCAAACAGGTGAACTAA
Protein sequence

>Msa0264540

MSRKPVDGFKPENSSLSYADFHREVTKDEADKSLKGFSNQQRQTTCRRENDEDELVKHMKTLPGYLERGEKIPEKALNVGVLDWTSLERWQYSNKLVPPRSSRSSTSSSNTSTSIRTEDLCGNSRRGLNWSPSRQRIIPQSVQSHSMASTKQDHYIAVRSSGENAGNRLNLRDGNSSIDIQRKNVRTIDHLSRNHPTSILKGSDRKHLHPHIIKESGILSHDRTYEAASHAKLEMSTQDDQMEKKKGNLREQSSGVNAHDMLGKSKPIVLILPRDNPHKNNHCRAPDMQTTLDQKLGSHSQTRLFVNPNQPSCTYLTRNASHSCPLPDELRESHSQQESQPSSIDAESFKIPVSTFSEPSAPVPVRMGMSPCRSRKAEERKRTVAVSCSANAPPTEVDQKVTTEKPRSSSPFRRLSFSMGFTNKVSGCKEVAYVPHQSSVATHKPSSENVRGHASSNMPGSDKPGNAGKNRSSPLRRFLDPLVKPKAANCHNSMEVSQKDSENARGYVGSNISGNKSGAAGKSRSSPLRRLLDPLLKPKAANCHHSINLFQKESVVTNKSGRSGNGKCSTILPEKELDKDQRFGCSTVNTAELSSEEKYIPSTSQALLRISMKNGQPLFTFAVGNNSNILAATVKYSTVPRQGECSCIYTFFTFREVKKKNGSRTNNTGKSKGPDYVRHVIAQMKLSDLHYDDSNSQNRVDSITKEFVLFSVKLKQGDTQVADYQPDDELAAIVVKSPKAISYTHQHECQDLLQVTVVLPSGVHSLPSDGGPSSLIERWKTGGSCDCGGWDLACKLKILANNNQTCRKSRTSEAYFADQYELFFQGTEQCQDNRPVFNFSHFEPGVYSVAFGSSLSPLQAFSICIAMVDGKLPYELSGSRNSIEGKNQGNLYWFKQVN*