AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0339930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339930 MtrunA17_Chr2g0328721 94.162 925 43 3 1 924 1 915 0.0 1744
Msa0339930 MtrunA17_Chr4g0032351 50.530 944 379 18 1 924 1 876 0.0 726
Msa0339930 MtrunA17_Chr4g0008861 35.934 423 230 10 511 924 537 927 1.30e-63 232
Msa0339930 MtrunA17_Chr7g0240931 31.178 433 211 13 515 924 470 838 4.03e-50 191
Msa0339930 MtrunA17_Chr5g0397401 28.539 445 240 17 526 924 209 621 9.05e-18 88.2
Msa0339930 MtrunA17_Chr8g0386851 37.447 235 111 11 711 924 510 729 1.31e-17 87.8
Msa0339930 MtrunA17_Chr1g0186181 34.615 130 63 4 755 873 480 598 9.55e-17 85.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0339930 AT5G59020.1 30.319 940 436 34 43 924 2 780 1.50e-87 297
Msa0339930 AT2G29510.1 39.671 426 191 12 516 924 463 839 9.13e-73 257
Msa0339930 AT2G29510.1 26.733 505 321 11 7 501 36 501 6.95e-26 115
Msa0339930 AT5G01030.3 33.985 409 181 13 522 924 419 744 1.86e-47 182
Msa0339930 AT5G01030.1 33.985 409 181 13 522 924 419 744 1.86e-47 182
Msa0339930 AT5G01030.2 33.985 409 181 13 522 924 419 744 1.86e-47 182
Msa0339930 AT2G37930.3 35.294 340 149 14 589 924 299 571 3.56e-38 151
Msa0339930 AT2G37930.4 35.294 340 149 14 589 924 299 571 3.56e-38 151
Msa0339930 AT2G37930.1 35.294 340 149 14 589 924 271 543 4.44e-38 150
Msa0339930 AT2G37930.2 39.269 219 89 9 589 803 299 477 5.17e-29 122
Msa0339930 AT1G04490.9 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.5 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.6 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.3 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.7 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.2 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.1 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G04490.8 41.880 117 51 4 753 868 288 388 4.26e-20 94.4
Msa0339930 AT1G63520.1 30.688 189 100 6 686 866 310 475 1.10e-17 88.2
Msa0339930 AT2G33360.2 39.655 116 60 4 755 868 323 430 2.15e-17 86.7
Msa0339930 AT2G33360.1 39.655 116 60 4 755 868 478 585 2.97e-17 87.0
Msa0339930 AT1G04490.4 63.830 47 16 1 753 799 288 333 9.95e-14 74.3
Msa0339930 AT4G11450.1 36.420 162 87 5 711 868 474 623 1.86e-12 71.6

Find 259 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTTCTGAAATAAATTTA+TGG 0.138393 2_4:-61207840 None:intergenic
GTTTCTCAGTAGTTACTTTC+TGG 0.157657 2_4:-61207397 None:intergenic
CTCAATTGTCAACTCCCTTT+TGG 0.160961 2_4:-61209445 None:intergenic
GAAAACTTTACCAGGTTATT+TGG 0.162566 2_4:+61206380 Msa0339930:CDS
GGCTTCACAAATAAAGTTTC+TGG 0.172294 2_4:+61207461 Msa0339930:CDS
TCAACAACTCTCACACATTT+TGG 0.181247 2_4:+61204925 Msa0339930:five_prime_UTR
TGTTGAGCTTCGGCTACTTC+TGG 0.183777 2_4:-61206499 None:intergenic
CATGCTGGTGGATAACTTTC+AGG 0.191990 2_4:-61206184 None:intergenic
TCCAAGGTTGTTTGCATATC+AGG 0.215229 2_4:-61207059 None:intergenic
ACTCTAATTACATGATTTAT+TGG 0.218147 2_4:-61209332 None:intergenic
AATATACTCCAGGTTCAAAA+TGG 0.220776 2_4:-61208845 None:intergenic
GGATCAAGTAACCTCCTTAA+AGG 0.233429 2_4:-61207782 None:intergenic
TGAGTTCCATATGTAAATTT+TGG 0.234628 2_4:+61209464 Msa0339930:three_prime_UTR
ATGTTTATCTAACTGATATT+AGG 0.238504 2_4:+61206149 Msa0339930:five_prime_UTR
CAAATATTTGCTGCACTAAA+TGG 0.238536 2_4:-61209137 None:intergenic
TTTACATCCACATATTATTA+AGG 0.241348 2_4:+61206824 Msa0339930:CDS
CAAATAATCTTGTTTGACTA+TGG 0.257790 2_4:-61207097 None:intergenic
GAGGCAGACAAATCTTTAAA+AGG 0.260461 2_4:+61206288 Msa0339930:CDS
AAAGCAGGTCCAGCCCTTTA+AGG 0.262079 2_4:+61207768 Msa0339930:CDS
TGATCAAATGGAAAAGAAAA+AGG 0.267133 2_4:+61206920 Msa0339930:CDS
AACACTCAACGACGTCGTTT+TGG 0.269490 2_4:+61204975 Msa0339930:five_prime_UTR
TGCCAACAGCAAATGTAAAA+AGG 0.275238 2_4:-61208054 None:intergenic
TATGTTGGTTCAAACATTTC+AGG 0.302476 2_4:+61207722 Msa0339930:CDS
CGGAAAGGTGAAGAGCTTCT+TGG 0.312565 2_4:-61207419 None:intergenic
AAACTCCCTTACGAACTTTC+TGG 0.316083 2_4:+61208936 Msa0339930:CDS
TTATGGCAGTTTGCTGCCTT+TGG 0.323720 2_4:-61207656 None:intergenic
AGATTTGTCTGCCTCGTCTT+TGG 0.325531 2_4:-61206280 None:intergenic
ATATACTAGTAGGATGGTTT+CGG 0.327833 2_4:-61206779 None:intergenic
TGAATGTTGGGGTCCTTGAT+TGG 0.329534 2_4:+61206433 Msa0339930:CDS
TGATAGAGTCCACACGGTTC+TGG 0.329830 2_4:-61208291 None:intergenic
TATACTAGTAGGATGGTTTC+GGG 0.333075 2_4:-61206778 None:intergenic
GTACCAAAGGCATATTAATC+TGG 0.335084 2_4:+61209698 Msa0339930:three_prime_UTR
AACTAGGTTGTGACTCTTGC+TGG 0.337889 2_4:-61207208 None:intergenic
ATTCGTACACCATTGATTTA+CGG 0.340316 2_4:+61209572 Msa0339930:three_prime_UTR
ATTCTAGAAGGGGTCTAAAT+TGG 0.346390 2_4:+61206571 Msa0339930:CDS
GTTGAGCTTCGGCTACTTCT+GGG 0.350508 2_4:-61206498 None:intergenic
CGGAGAAAGCTTTGAATGTT+GGG 0.350856 2_4:+61206421 Msa0339930:CDS
TGATTTACGGAAAGTACATT+TGG 0.353358 2_4:+61209585 Msa0339930:three_prime_UTR
AACATTTCAGGCAACAAATC+AGG 0.356426 2_4:+61207734 Msa0339930:CDS
TTTGAAACTTTCGGCATCAA+TGG 0.361650 2_4:-61207231 None:intergenic
GGATAGGCAGCGTAACTTGC+AGG 0.364076 2_4:-61209050 None:intergenic
CGCCTGATTCTTTCCCTCGA+TGG 0.367460 2_4:-61208970 None:intergenic
GGAGTATATTCAGTAGCTTT+TGG 0.369009 2_4:+61208858 Msa0339930:CDS
CTTATTGAGCGCTGGAAAAC+TGG 0.372139 2_4:+61208526 Msa0339930:CDS
AAAGGCAAACAACTTGTAGA+AGG 0.380262 2_4:+61206325 Msa0339930:CDS
ATCAGTGCAATCTCACTCTA+TGG 0.382134 2_4:+61206623 Msa0339930:CDS
GATTTACCAAAATTTACATA+TGG 0.390659 2_4:-61209470 None:intergenic
TTCCCAGATTAATATGCCTT+TGG 0.391921 2_4:-61209701 None:intergenic
TCTGCACGTTTGATTATTGT+TGG 0.392375 2_4:-61208602 None:intergenic
ACTTATGTGGTAATTCTAGA+AGG 0.392524 2_4:+61206559 Msa0339930:CDS
CTAGGTAATATAAGAACAAT+TGG 0.399469 2_4:-61207002 None:intergenic
TGATGGCAGTTTGCTGCCTT+AGG 0.400480 2_4:-61207815 None:intergenic
ATGACATGGCGAACGTAATC+AGG 0.402175 2_4:-61208223 None:intergenic
GTAAGTGACCACATTCAAAA+TGG 0.402371 2_4:+61209370 Msa0339930:three_prime_UTR
TGACTTTCTCTAAGTTCATC+TGG 0.412561 2_4:-61207182 None:intergenic
TGATTGCGGAGGTTGGGATT+TGG 0.414627 2_4:+61208558 Msa0339930:CDS
AACTGCATTCACCTTGTCTT+GGG 0.415203 2_4:-61208120 None:intergenic
CTCCATCGAGGGAAAGAATC+AGG 0.416905 2_4:+61208968 Msa0339930:CDS
ATGCGTATAACTGATAGCTT+TGG 0.419288 2_4:-61208416 None:intergenic
TATATAGCTGTCAGATCCTC+TGG 0.421401 2_4:+61206666 Msa0339930:CDS
TTGGACAAGGACCAGAGGTT+TGG 0.422199 2_4:+61207932 Msa0339930:CDS
AAATTTATTTGGAAGACAAA+AGG 0.426113 2_4:+61206102 Msa0339930:five_prime_UTR
ACGTACTTTCAGTTTATGAT+TGG 0.427028 2_4:+61209525 Msa0339930:three_prime_UTR
AAGGGGCTGACCATTCTTCA+TGG 0.430882 2_4:-61208035 None:intergenic
AAAATTTAGACCCTTCCAAC+TGG 0.431439 2_4:-61209083 None:intergenic
ACAACCTTGGATCAGAAGTT+AGG 0.433180 2_4:+61207071 Msa0339930:CDS
CCTTCCATTTCTCGCTTCTC+CGG 0.435150 2_4:+61205067 Msa0339930:five_prime_UTR
GCGATACCTCCATGGAGTTA+TGG 0.438420 2_4:-61207673 None:intergenic
GGTCCTTGATTGGACCAGTC+TGG 0.439964 2_4:+61206443 Msa0339930:CDS
TGAATGTCAAGATCTATTAC+AGG 0.440514 2_4:+61208444 Msa0339930:CDS
GAATCAGGCGGAATCTCTAT+TGG 0.444298 2_4:+61208983 Msa0339930:CDS
CCACTTTCCTTAATAATATG+TGG 0.445996 2_4:-61206831 None:intergenic
GAGGAGATTCCTTGATCCAC+TGG 0.447216 2_4:+61207628 Msa0339930:CDS
TCAGGTTTGAACCCATCAAC+AGG 0.452740 2_4:-61206216 None:intergenic
TACTAAGCCTGATTTCCAAA+AGG 0.453266 2_4:+61209430 Msa0339930:three_prime_UTR
TATGTACAGGAGGGTTGATT+CGG 0.458737 2_4:-61207125 None:intergenic
GATCAAGTAACCTCCTTAAA+GGG 0.464365 2_4:-61207781 None:intergenic
GGTTCAAACAGGTGAACTAA+AGG 0.464778 2_4:+61209004 Msa0339930:CDS
AGGATCTGACAGCTATATAA+TGG 0.464917 2_4:-61206662 None:intergenic
ATAGCAGCAAGCTCGTCATC+TGG 0.464983 2_4:-61208379 None:intergenic
ATCCACCATTGCAATGCAAA+TGG 0.465100 2_4:-61208910 None:intergenic
AACAGTGCGCTTCCTTTCCT+CGG 0.465138 2_4:-61207333 None:intergenic
CCGGAGAAAGCTTTGAATGT+TGG 0.465166 2_4:+61206420 Msa0339930:CDS
CAACTGCATTCACCTTGTCT+TGG 0.465216 2_4:-61208121 None:intergenic
GAATCTCTATTGGTTCAAAC+AGG 0.465357 2_4:+61208993 Msa0339930:CDS
TACTAGAAGATGTTGAGCTT+CGG 0.467189 2_4:-61206509 None:intergenic
CATTCCCATTCTGACGGGTA+CGG 0.468055 2_4:-61207288 None:intergenic
ATGAGTAGAAAACCTGTTGA+TGG 0.468639 2_4:+61206204 Msa0339930:CDS
CCAACATTCAAAGCTTTCTC+CGG 0.470901 2_4:-61206420 None:intergenic
TATGTGTGGCTACGGAGCTC+TGG 0.472752 2_4:-61207511 None:intergenic
CTTTCGGCATCAATGGAACT+AGG 0.473479 2_4:-61207224 None:intergenic
GATCCTGTGATTGCGGAGGT+TGG 0.473723 2_4:+61208551 Msa0339930:CDS
ATCCTGTGATTGCGGAGGTT+GGG 0.475937 2_4:+61208552 Msa0339930:CDS
GTGAAGCTGCCTCGTAAGTC+CGG 0.479412 2_4:-61206869 None:intergenic
AGTGATAAACCTGGAAATGC+TGG 0.482598 2_4:+61207584 Msa0339930:CDS
ACCCTTCCAACTGGAGAGAC+AGG 0.483381 2_4:-61209074 None:intergenic
CTCCTGTCTCTCCAGTTGGA+AGG 0.483766 2_4:+61209072 Msa0339930:CDS
GAGCACGCAAGATGATCAAA+TGG 0.485322 2_4:+61206908 Msa0339930:CDS
AATTTATTTGGAAGACAAAA+GGG 0.485816 2_4:+61206103 Msa0339930:five_prime_UTR
GCTGCCTTTGGTTTCACCAG+TGG 0.487185 2_4:-61207644 None:intergenic
ACAAATAAGAGTGGTAGGTC+AGG 0.487236 2_4:+61207872 Msa0339930:CDS
CTCTGCAAATGCACCTCCTA+CGG 0.488282 2_4:+61207367 Msa0339930:CDS
TTGGTTTCACCAGTGGATCA+AGG 0.488599 2_4:-61207637 None:intergenic
TCCTGTCTCTCCAGTTGGAA+GGG 0.491356 2_4:+61209073 Msa0339930:CDS
AAGGAATCTCCTCAAAGGGC+TGG 0.495949 2_4:-61207618 None:intergenic
ATGTACTTTCCGTAAATCAA+TGG 0.497080 2_4:-61209581 None:intergenic
TATCCTCCTGTCTCTCCAGT+TGG 0.497408 2_4:+61209068 Msa0339930:CDS
TTGAACTCAACTCTAAGATT+CGG 0.500482 2_4:-61209501 None:intergenic
CTCCATTTGCATTGCAATGG+TGG 0.500869 2_4:+61208908 Msa0339930:CDS
GGCACCCGTACCCGTCAGAA+TGG 0.502194 2_4:+61207283 Msa0339930:CDS
GGCAGCTTCACATGCTAAGT+TGG 0.502580 2_4:+61206881 Msa0339930:CDS
TTTCCAGGTTTATCACTGCC+TGG 0.503165 2_4:-61207578 None:intergenic
GATCGAGTTATGAGCTTGCA+AGG 0.503551 2_4:-61209209 None:intergenic
CTTGATCCAGAAAGTTCGTA+AGG 0.503613 2_4:-61208942 None:intergenic
AAGAGTGGTAGGTCAGGTAA+TGG 0.504626 2_4:+61207878 Msa0339930:CDS
GGCAACAAATCAGGTGCTGC+TGG 0.505394 2_4:+61207743 Msa0339930:CDS
CTTCGTCGCTTATTGAGCGC+TGG 0.506867 2_4:+61208518 Msa0339930:CDS
TAAAGTTTCTGGCTGTAAAG+AGG 0.506903 2_4:+61207472 Msa0339930:CDS
TACCAAAGGCATATTAATCT+GGG 0.507964 2_4:+61209699 Msa0339930:three_prime_UTR
CCGTCGACTTAGCTTCAGCA+TGG 0.509438 2_4:+61207439 Msa0339930:CDS
AAAACAGGTCCAGCCCTTTG+AGG 0.509553 2_4:+61207609 Msa0339930:CDS
GTTCAAACAGGTGAACTAAA+GGG 0.512189 2_4:+61209005 Msa0339930:CDS
AGAGTGGTAGGTCAGGTAAT+GGG 0.513259 2_4:+61207879 Msa0339930:CDS
AGTGAGATTGCACTGATTGT+GGG 0.514414 2_4:-61206617 None:intergenic
CAACATTCAAAGCTTTCTCC+GGG 0.514623 2_4:-61206419 None:intergenic
ACTAAGCCTGATTTCCAAAA+GGG 0.515341 2_4:+61209431 Msa0339930:three_prime_UTR
GGGATTATCCTTTGACGAGA+AGG 0.515743 2_4:-61206597 None:intergenic
AAGTAACCTCCTTAAAGGGC+TGG 0.516427 2_4:-61207777 None:intergenic
GAACCTTTCAATATACTAGT+AGG 0.516909 2_4:-61206789 None:intergenic
ATATACTCCAGGTTCAAAAT+GGG 0.518411 2_4:-61208844 None:intergenic
CCACATATTATTAAGGAAAG+TGG 0.519204 2_4:+61206831 Msa0339930:CDS
GTTACCGGAGAAGCGAGAAA+TGG 0.519396 2_4:-61205071 None:intergenic
GCACCCGTACCCGTCAGAAT+GGG 0.519505 2_4:+61207284 Msa0339930:CDS
GAAATAAATTTATGGAGTGA+TGG 0.519977 2_4:-61207832 None:intergenic
GCATTCACCTTGTCTTGGGA+CGG 0.522795 2_4:-61208116 None:intergenic
GTTATTCTTACGTGCTGCAT+AGG 0.523571 2_4:+61209180 Msa0339930:three_prime_UTR
ATCCCAACCTCCGCAATCAC+AGG 0.524007 2_4:-61208554 None:intergenic
TCTCCCCTCTCCAAATAACC+TGG 0.524321 2_4:-61206390 None:intergenic
TTTACCAGGTTATTTGGAGA+GGG 0.524450 2_4:+61206386 Msa0339930:CDS
ATTCCCATTCTGACGGGTAC+GGG 0.525477 2_4:-61207287 None:intergenic
AGATCCTCTGGAGAGAATGC+TGG 0.527741 2_4:+61206678 Msa0339930:CDS
GATCAAGGAATCTCCTCAAA+GGG 0.529529 2_4:-61207622 None:intergenic
AAGTTCATCTGGCAGAGGAC+AGG 0.529947 2_4:-61207171 None:intergenic
GGGAAAGATGATCAATAGTC+CGG 0.530363 2_4:-61206758 None:intergenic
TCCTGATATGCAAACAACCT+TGG 0.531394 2_4:+61207058 Msa0339930:CDS
GAGTCCATGCAGATCTAGAA+AGG 0.532150 2_4:+61207310 Msa0339930:CDS
CTTATGTGGTAATTCTAGAA+GGG 0.535601 2_4:+61206560 Msa0339930:CDS
CTGAGAATATCCATGAAGAA+TGG 0.536177 2_4:+61208025 Msa0339930:CDS
TGGTTACAAATAAGAGTGGT+AGG 0.536577 2_4:+61207867 Msa0339930:CDS
TGAGCTTCGGCTACTTCTGG+GGG 0.537355 2_4:-61206496 None:intergenic
CGTCGACTTAGCTTCAGCAT+GGG 0.537553 2_4:+61207440 Msa0339930:CDS
AGCAAGGATGATTGTACCAA+AGG 0.539914 2_4:+61209685 Msa0339930:three_prime_UTR
TTCTGGTCTACTTCCGTAGG+AGG 0.541819 2_4:-61207380 None:intergenic
TGCGTATAACTGATAGCTTT+GGG 0.543220 2_4:-61208415 None:intergenic
AAAGCTACTGAATATACTCC+AGG 0.543507 2_4:-61208855 None:intergenic
ATTGCGAGTCAGATATGTAC+AGG 0.545276 2_4:-61207138 None:intergenic
GCAAATGGAGAACGCTTGCA+AGG 0.545356 2_4:-61208895 None:intergenic
CTGTGGAACAACCAAACCTC+TGG 0.545770 2_4:-61207943 None:intergenic
GTATATTGAAAGGTTCTGAC+AGG 0.547243 2_4:+61206796 Msa0339930:CDS
TGATCCACTGCTGAAACCTA+AGG 0.547319 2_4:+61207799 Msa0339930:CDS
AAGCACATGAAAACTTTACC+AGG 0.547766 2_4:+61206372 Msa0339930:CDS
GTTCTCCATTTGCATTGCAA+TGG 0.547798 2_4:+61208905 Msa0339930:CDS
ATTGGTCTCCTTCTCGTCAA+AGG 0.548579 2_4:+61206589 Msa0339930:CDS
TTGAGCTTCGGCTACTTCTG+GGG 0.548970 2_4:-61206497 None:intergenic
GCTTCCTAACTTCTGATCCA+AGG 0.549468 2_4:-61207075 None:intergenic
GTTCCAGACTGGTCCAATCA+AGG 0.550773 2_4:-61206446 None:intergenic
GTTAATGCACATGATATGCT+TGG 0.550960 2_4:+61206969 Msa0339930:CDS
CTTTCAATATACTAGTAGGA+TGG 0.558682 2_4:-61206785 None:intergenic
CAGGTGCTGCTGGTAAAAGC+AGG 0.560366 2_4:+61207753 Msa0339930:CDS
ATTGGACCAGTCTGGAACGT+TGG 0.562574 2_4:+61206451 Msa0339930:CDS
CATGCTAGCTCAAACATGCC+AGG 0.564429 2_4:+61207560 Msa0339930:CDS
GCTGCCTTAGGTTTCAGCAG+TGG 0.565371 2_4:-61207803 None:intergenic
GGATCAAGGAATCTCCTCAA+AGG 0.565697 2_4:-61207623 None:intergenic
ATTTGCATTGCAATGGTGGA+TGG 0.566087 2_4:+61208912 Msa0339930:CDS
GACGAAGGTCCACCATCACT+TGG 0.566445 2_4:-61208502 None:intergenic
CTTTACCAGGTTATTTGGAG+AGG 0.566909 2_4:+61206385 Msa0339930:CDS
GAGTGAGATTGCACTGATTG+TGG 0.567293 2_4:-61206618 None:intergenic
GGAGAAAGCTTTGAATGTTG+GGG 0.568033 2_4:+61206422 Msa0339930:CDS
CATCCTACTAGTATATTGAA+AGG 0.568484 2_4:+61206786 Msa0339930:CDS
TTCTGAACTAGGTTTATGTG+TGG 0.570235 2_4:-61207525 None:intergenic
GGAAGACTATGAACTCCGCT+TGG 0.570545 2_4:-61208481 None:intergenic
GAAAATGCGAGAGGTTATGT+TGG 0.570791 2_4:+61207707 Msa0339930:CDS
TCGGCCTTTCTAGATCTGCA+TGG 0.571902 2_4:-61207314 None:intergenic
ACTAAAGCAAGGAGATACTC+AGG 0.572897 2_4:+61208342 Msa0339930:CDS
CATAGTCTTCCAAGTGATGG+TGG 0.574925 2_4:+61208493 Msa0339930:CDS
TTTATTTCAGAAAGAGTCTG+TGG 0.575556 2_4:+61207847 Msa0339930:CDS
TCTCTAAGTTCATCTGGCAG+AGG 0.575764 2_4:-61207176 None:intergenic
ACATGATTTATTGGTCAACC+AGG 0.576184 2_4:-61209323 None:intergenic
TTAATGCACATGATATGCTT+GGG 0.581166 2_4:+61206970 Msa0339930:CDS
AACTGGAGAGACAGGAGGAT+AGG 0.582482 2_4:-61209066 None:intergenic
ATGCAGATCTAGAAAGGCCG+AGG 0.582971 2_4:+61207316 Msa0339930:CDS
GTACTGCCAACGTTCCAGAC+TGG 0.583526 2_4:-61206457 None:intergenic
TGGAACATACGAAGTTGCAA+AGG 0.585177 2_4:+61209605 Msa0339930:three_prime_UTR
ACTAGGTTGTGACTCTTGCT+GGG 0.586985 2_4:-61207207 None:intergenic
GGACTCATTCCCATTCTGAC+GGG 0.587176 2_4:-61207293 None:intergenic
GTGGCATCTTGTCACATGAC+CGG 0.587769 2_4:+61206850 Msa0339930:CDS
TGAGTAGAAAACCTGTTGAT+GGG 0.591717 2_4:+61206205 Msa0339930:CDS
ACTTTCTGGTCTACTTCCGT+AGG 0.592655 2_4:-61207383 None:intergenic
TGGACTCATTCCCATTCTGA+CGG 0.592869 2_4:-61207294 None:intergenic
GATCTAGAAAGGCCGAGGAA+AGG 0.593514 2_4:+61207321 Msa0339930:CDS
GCAGGTCCAGCCCTTTAAGG+AGG 0.593547 2_4:+61207771 Msa0339930:CDS
ATCCGTACTGAGGACTTATG+TGG 0.598102 2_4:+61206546 Msa0339930:CDS
ACAGGTGAACTAAAGGGTCA+TGG 0.599263 2_4:+61209011 Msa0339930:CDS
TACTCAACCGTCCCAAGACA+AGG 0.600053 2_4:+61208109 Msa0339930:CDS
GCTTCATTTGAGCAATGACA+TGG 0.600466 2_4:-61208237 None:intergenic
CTGACGGGTACGGGTGCCGA+AGG 0.603088 2_4:-61207278 None:intergenic
ATGCCAGGCAGTGATAAACC+TGG 0.604201 2_4:+61207575 Msa0339930:CDS
AGAAGCGAGAAATGGAAGGA+AGG 0.606284 2_4:-61205063 None:intergenic
GTTCATAGTCTTCCAAGTGA+TGG 0.607090 2_4:+61208490 Msa0339930:CDS
ACTAGGTTTATGTGTGGCTA+CGG 0.607112 2_4:-61207519 None:intergenic
AAGGCAAACAACTTGTAGAA+GGG 0.607436 2_4:+61206326 Msa0339930:CDS
AATCGTCTGAATCTAAGAGA+TGG 0.607593 2_4:+61206702 Msa0339930:CDS
TTGATCCAGAAAGTTCGTAA+GGG 0.612802 2_4:-61208941 None:intergenic
CCATGCTGAAGCTAAGTCGA+CGG 0.615019 2_4:-61207439 None:intergenic
TATATGCCGCTAGTCCTCCT+CGG 0.615684 2_4:+61209645 Msa0339930:three_prime_UTR
ATTGAGCGCTGGAAAACTGG+TGG 0.616441 2_4:+61208529 Msa0339930:CDS
CAAATGGAGAACGCTTGCAA+GGG 0.617576 2_4:-61208894 None:intergenic
CTGAAGCTAAGTCGACGGAA+AGG 0.621601 2_4:-61207434 None:intergenic
CCGGAGAAGCGAGAAATGGA+AGG 0.626224 2_4:-61205067 None:intergenic
TTACCAGGTTATTTGGAGAG+GGG 0.628328 2_4:+61206387 Msa0339930:CDS
AGCAAACTGCCATAACTCCA+TGG 0.631309 2_4:+61207664 Msa0339930:CDS
TGATCCACTGGTGAAACCAA+AGG 0.635139 2_4:+61207640 Msa0339930:CDS
GGATCAAGAAACTCCATCGA+GGG 0.636295 2_4:+61208957 Msa0339930:CDS
CTATAGATATCTCATTAGCA+AGG 0.636461 2_4:+61209669 Msa0339930:three_prime_UTR
ATTTCCAGCATTCTCTCCAG+AGG 0.638927 2_4:-61206682 None:intergenic
TTATGTGGTAATTCTAGAAG+GGG 0.645972 2_4:+61206561 Msa0339930:CDS
AGTAGAGCTTGAGACGTCGA+AGG 0.647644 2_4:-61208004 None:intergenic
CGAGTCAGATATGTACAGGA+GGG 0.651401 2_4:-61207134 None:intergenic
CCTAGTTCAGAAAATGTGAG+AGG 0.652170 2_4:+61207536 Msa0339930:CDS
GCGAGTCAGATATGTACAGG+AGG 0.652877 2_4:-61207135 None:intergenic
ACTGGTGGATCCTGTGATTG+CGG 0.654665 2_4:+61208544 Msa0339930:CDS
AAGAATTGGACAAGGACCAG+AGG 0.656618 2_4:+61207927 Msa0339930:CDS
GTCACATGACCGGACTTACG+AGG 0.659708 2_4:+61206860 Msa0339930:CDS
TGGAAGGAAGGAAAGAGTGT+CGG 0.660642 2_4:-61205051 None:intergenic
CAGCGCTCAATAAGCGACGA+AGG 0.662885 2_4:-61208517 None:intergenic
TACCACATAAGTCCTCAGTA+CGG 0.668158 2_4:-61206548 None:intergenic
TTCAAATAGCCAGAACCGTG+TGG 0.669064 2_4:+61208282 Msa0339930:CDS
TATAGACCGAGGAGGACTAG+CGG 0.674139 2_4:-61209651 None:intergenic
TCTGTGGTTACAAATAAGAG+TGG 0.675902 2_4:+61207863 Msa0339930:CDS
AATTTAAGAGAACAAAGTAG+TGG 0.681012 2_4:+61206945 Msa0339930:CDS
CAATTCCGCAGTGTTAACTG+TGG 0.681722 2_4:-61207960 None:intergenic
AGATCTATTACAGGTAACAG+TGG 0.682338 2_4:+61208453 Msa0339930:CDS
ATCAACTTCTATCCGTACTG+AGG 0.683242 2_4:+61206536 Msa0339930:CDS
AAAGATTCAGAAAATGCGAG+AGG 0.687291 2_4:+61207698 Msa0339930:CDS
CTTCCAACTGGAGAGACAGG+AGG 0.690282 2_4:-61209071 None:intergenic
GAGCTTCGGCTACTTCTGGG+GGG 0.691853 2_4:-61206495 None:intergenic
GGTGGATCCTGTGATTGCGG+AGG 0.700883 2_4:+61208547 Msa0339930:CDS
GGAAGTCGGACAAATAACAC+AGG 0.702519 2_4:+61208187 Msa0339930:CDS
TCGTGAAGTTACCAAAGACG+AGG 0.707711 2_4:+61206269 Msa0339930:CDS
GAGATATCTATAGACCGAGG+AGG 0.710652 2_4:-61209659 None:intergenic
CATCGAGGGAAAGAATCAGG+CGG 0.712324 2_4:+61208971 Msa0339930:CDS
GTAACAGTGGTGCTTCCAAG+CGG 0.717660 2_4:+61208466 Msa0339930:CDS
AATGAGATATCTATAGACCG+AGG 0.718687 2_4:-61209662 None:intergenic
TGGATCAAGAAACTCCATCG+AGG 0.728422 2_4:+61208956 Msa0339930:CDS
AAAGCAAGGAGATACTCAGG+TGG 0.728467 2_4:+61208345 Msa0339930:CDS
GGTTGAGTACTTCACTGTGG+CGG 0.740443 2_4:-61208095 None:intergenic
GACGGTTGAGTACTTCACTG+TGG 0.749312 2_4:-61208098 None:intergenic
AAACTGCCATAACTCCATGG+AGG 0.775149 2_4:+61207667 Msa0339930:CDS
TTGTTCCACAGTTAACACTG+CGG 0.775387 2_4:+61207955 Msa0339930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAACTGAAATTTATT+TGG + chr2_4:61206091-61206110 Msa0339930:five_prime_UTR 10.0%
!! TACAAAAACAAAACAAAAAA+TGG - chr2_4:61205220-61205239 None:intergenic 15.0%
!! AATTAAAAATGAATAATGCA+GGG - chr2_4:61205337-61205356 None:intergenic 15.0%
!! AAATTAAAAATGAATAATGC+AGG - chr2_4:61205338-61205357 None:intergenic 15.0%
!!! ATTTTAGCTTATGTGATTTT+CGG + chr2_4:61205305-61205324 Msa0339930:intron 20.0%
!!! CTATTAGTATCAGATTTTTT+AGG + chr2_4:61205456-61205475 Msa0339930:intron 20.0%
!! AAAAATGAGAAAATCCAATA+GGG - chr2_4:61205565-61205584 None:intergenic 20.0%
!!! TTTGTTTTTGTTTTGTTGAA+AGG + chr2_4:61205639-61205658 Msa0339930:intron 20.0%
!!! TTGTTTTTGTTTTGTTGAAA+GGG + chr2_4:61205640-61205659 Msa0339930:intron 20.0%
!! CATATTAATCAAATATTGAG+TGG - chr2_4:61205771-61205790 None:intergenic 20.0%
!! CACTCAATATTTGATTAATA+TGG + chr2_4:61205769-61205788 Msa0339930:intron 20.0%
!! AGTTAAGAATCTTATCAAAA+AGG + chr2_4:61205903-61205922 Msa0339930:intron 20.0%
!! TCAAAAAGGAAATAATAATG+TGG + chr2_4:61205917-61205936 Msa0339930:intron 20.0%
!! CAAAAAGGAAATAATAATGT+GGG + chr2_4:61205918-61205937 Msa0339930:intron 20.0%
!!! GTTTATGAAATCTTTGTTTT+TGG + chr2_4:61206021-61206040 Msa0339930:intron 20.0%
!! AAATTTATTTGGAAGACAAA+AGG + chr2_4:61206102-61206121 Msa0339930:five_prime_UTR 20.0%
!! AATTTATTTGGAAGACAAAA+GGG + chr2_4:61206103-61206122 Msa0339930:five_prime_UTR 20.0%
!! ATGTTTATCTAACTGATATT+AGG + chr2_4:61206149-61206168 Msa0339930:five_prime_UTR 20.0%
!! TTTACATCCACATATTATTA+AGG + chr2_4:61206824-61206843 Msa0339930:CDS 20.0%
!!! CTCTTTCTGAAATAAATTTA+TGG - chr2_4:61207843-61207862 None:intergenic 20.0%
!!! TCTATACTTTTTTCACATTT+AGG + chr2_4:61208146-61208165 Msa0339930:CDS 20.0%
!!! CTATACTTTTTTCACATTTA+GGG + chr2_4:61208147-61208166 Msa0339930:CDS 20.0%
!! TATTGTAGATTAATCTTAGT+TGG + chr2_4:61208723-61208742 Msa0339930:intron 20.0%
!!! GTAAATTGCATTTTATCTTT+TGG + chr2_4:61209278-61209297 Msa0339930:three_prime_UTR 20.0%
!! ACTCTAATTACATGATTTAT+TGG - chr2_4:61209335-61209354 None:intergenic 20.0%
!! GATTTACCAAAATTTACATA+TGG - chr2_4:61209473-61209492 None:intergenic 20.0%
!!! TGTAAATTTTGGTAAATCAT+TGG + chr2_4:61209475-61209494 Msa0339930:three_prime_UTR 20.0%
! AAAGCTAAAATGTGATTTGA+AGG - chr2_4:61205096-61205115 None:intergenic 25.0%
!!! TTTTTAGCAATTTCCAAACA+AGG + chr2_4:61205164-61205183 Msa0339930:intron 25.0%
! TGGAAAAAATAACAGAACAA+CGG - chr2_4:61205200-61205219 None:intergenic 25.0%
! AATCACATAAGCTAAAATTG+CGG - chr2_4:61205303-61205322 None:intergenic 25.0%
!! GAAAAGTGTACGTTAATTAA+TGG - chr2_4:61205379-61205398 None:intergenic 25.0%
! GAAAAATGAGAAAATCCAAT+AGG - chr2_4:61205566-61205585 None:intergenic 25.0%
! TGTTATGAGTTTCATTTGAT+CGG - chr2_4:61205596-61205615 None:intergenic 25.0%
!!! GATTAATATGGTTTTGTAGT+TGG + chr2_4:61205781-61205800 Msa0339930:intron 25.0%
! TTCATGTGATTATTCAAATG+AGG + chr2_4:61205859-61205878 Msa0339930:intron 25.0%
! ATGAGGAAACAAATCTAATA+TGG + chr2_4:61205876-61205895 Msa0339930:intron 25.0%
! TGAGGAAACAAATCTAATAT+GGG + chr2_4:61205877-61205896 Msa0339930:intron 25.0%
! TGATCAAATGGAAAAGAAAA+AGG + chr2_4:61206920-61206939 Msa0339930:CDS 25.0%
! GATCAAATGGAAAAGAAAAA+GGG + chr2_4:61206921-61206940 Msa0339930:CDS 25.0%
! ATCAAATGGAAAAGAAAAAG+GGG + chr2_4:61206922-61206941 Msa0339930:CDS 25.0%
! AATTTAAGAGAACAAAGTAG+TGG + chr2_4:61206945-61206964 Msa0339930:CDS 25.0%
! CTAGGTAATATAAGAACAAT+TGG - chr2_4:61207005-61207024 None:intergenic 25.0%
!!! TACAGTGATTGTTTTTATGA+GGG - chr2_4:61207034-61207053 None:intergenic 25.0%
!! CAAATAATCTTGTTTGACTA+TGG - chr2_4:61207100-61207119 None:intergenic 25.0%
!!! AACAGGAATTTTGAAACTTT+CGG - chr2_4:61207243-61207262 None:intergenic 25.0%
! GAAATAAATTTATGGAGTGA+TGG - chr2_4:61207835-61207854 None:intergenic 25.0%
! TATACTACCTGAAAAAGAAT+TGG + chr2_4:61207913-61207932 Msa0339930:CDS 25.0%
! TTAAAAAGAAGAATGGAAGT+CGG + chr2_4:61208173-61208192 Msa0339930:CDS 25.0%
!! TTTTCTGTAAAACTAAAGCA+AGG + chr2_4:61208331-61208350 Msa0339930:CDS 25.0%
! AGATTAATCTACAATATGCT+AGG - chr2_4:61208719-61208738 None:intergenic 25.0%
! AAATGGGAAAAATTGAAAAC+AGG - chr2_4:61208831-61208850 None:intergenic 25.0%
!! TGAGTTCCATATGTAAATTT+TGG + chr2_4:61209464-61209483 Msa0339930:three_prime_UTR 25.0%
! ACATTTTGGATTGAAGTTAG+TGG + chr2_4:61204939-61204958 Msa0339930:five_prime_UTR 30.0%
AAATGTGATTTGAAGGTTAC+CGG - chr2_4:61205089-61205108 None:intergenic 30.0%
TAACAGAACAACGGAAAAAT+AGG - chr2_4:61205191-61205210 None:intergenic 30.0%
GATTATAAAACAAACGGTAG+TGG - chr2_4:61205276-61205295 None:intergenic 30.0%
GGAAGCGATTATAAAACAAA+CGG - chr2_4:61205282-61205301 None:intergenic 30.0%
! TAATTTGTGCTATTCTTGAG+AGG + chr2_4:61205403-61205422 Msa0339930:intron 30.0%
AATAGGGTAGTTAATCACAA+TGG - chr2_4:61205549-61205568 None:intergenic 30.0%
ATTGTGATTAACTACCCTAT+TGG + chr2_4:61205548-61205567 Msa0339930:intron 30.0%
GATCAAATGAAACTCATAAC+AGG + chr2_4:61205595-61205614 Msa0339930:intron 30.0%
!!! TTTTGTTTTGTTGAAAGGGT+AGG + chr2_4:61205644-61205663 Msa0339930:intron 30.0%
TATAACCGAGTTCAATTCTT+GGG - chr2_4:61205715-61205734 None:intergenic 30.0%
! ATACTGAATGATTCGTCTTT+TGG + chr2_4:61205732-61205751 Msa0339930:intron 30.0%
!! AAGGTTTTTCGAATCAACAA+AGG + chr2_4:61206307-61206326 Msa0339930:CDS 30.0%
GAAAACTTTACCAGGTTATT+TGG + chr2_4:61206380-61206399 Msa0339930:CDS 30.0%
ACTTATGTGGTAATTCTAGA+AGG + chr2_4:61206559-61206578 Msa0339930:CDS 30.0%
! CTTATGTGGTAATTCTAGAA+GGG + chr2_4:61206560-61206579 Msa0339930:CDS 30.0%
! TTATGTGGTAATTCTAGAAG+GGG + chr2_4:61206561-61206580 Msa0339930:CDS 30.0%
ATATACTAGTAGGATGGTTT+CGG - chr2_4:61206782-61206801 None:intergenic 30.0%
CTTTCAATATACTAGTAGGA+TGG - chr2_4:61206788-61206807 None:intergenic 30.0%
CATCCTACTAGTATATTGAA+AGG + chr2_4:61206786-61206805 Msa0339930:CDS 30.0%
GAACCTTTCAATATACTAGT+AGG - chr2_4:61206792-61206811 None:intergenic 30.0%
CCACTTTCCTTAATAATATG+TGG - chr2_4:61206834-61206853 None:intergenic 30.0%
CCACATATTATTAAGGAAAG+TGG + chr2_4:61206831-61206850 Msa0339930:CDS 30.0%
TTAATGCACATGATATGCTT+GGG + chr2_4:61206970-61206989 Msa0339930:CDS 30.0%
!!! CTACAGTGATTGTTTTTATG+AGG - chr2_4:61207035-61207054 None:intergenic 30.0%
!!! TTCTACTTTTTCAGAACCTT+CGG + chr2_4:61207262-61207281 Msa0339930:CDS 30.0%
!! TATGTTGGTTCAAACATTTC+AGG + chr2_4:61207722-61207741 Msa0339930:CDS 30.0%
TTTATTTCAGAAAGAGTCTG+TGG + chr2_4:61207847-61207866 Msa0339930:CDS 30.0%
!!! TTCTTTTTCAGGTAGTATAG+TGG - chr2_4:61207912-61207931 None:intergenic 30.0%
!!! TACTTTTTTCACATTTAGGG+AGG + chr2_4:61208150-61208169 Msa0339930:CDS 30.0%
AATAACACAGGAAAAAGCAA+AGG + chr2_4:61208199-61208218 Msa0339930:CDS 30.0%
TGAATGTCAAGATCTATTAC+AGG + chr2_4:61208444-61208463 Msa0339930:CDS 30.0%
TCTCTTCCATTGAATTAAGT+TGG + chr2_4:61208685-61208704 Msa0339930:intron 30.0%
GGATAACCAACTTAATTCAA+TGG - chr2_4:61208694-61208713 None:intergenic 30.0%
TAATCTACAATATGCTAGGA+AGG - chr2_4:61208715-61208734 None:intergenic 30.0%
AAGCTATGAATGCTAAATAC+AGG + chr2_4:61208779-61208798 Msa0339930:intron 30.0%
AGCTATGAATGCTAAATACA+GGG + chr2_4:61208780-61208799 Msa0339930:intron 30.0%
! AATTTTTCCCATTTTGAACC+TGG + chr2_4:61208837-61208856 Msa0339930:CDS 30.0%
ATATACTCCAGGTTCAAAAT+GGG - chr2_4:61208847-61208866 None:intergenic 30.0%
AATATACTCCAGGTTCAAAA+TGG - chr2_4:61208848-61208867 None:intergenic 30.0%
! TTGGAAGGGTCTAAATTTTA+TGG + chr2_4:61209087-61209106 Msa0339930:exon 30.0%
! CAAATATTTGCTGCACTAAA+TGG - chr2_4:61209140-61209159 None:intergenic 30.0%
!! ATTAGAGTCGTTTTATCGAA+TGG + chr2_4:61209347-61209366 Msa0339930:three_prime_UTR 30.0%
!! TTAGAGTCGTTTTATCGAAT+GGG + chr2_4:61209348-61209367 Msa0339930:three_prime_UTR 30.0%
!! TTGAACTCAACTCTAAGATT+CGG - chr2_4:61209504-61209523 None:intergenic 30.0%
ACGTACTTTCAGTTTATGAT+TGG + chr2_4:61209525-61209544 Msa0339930:three_prime_UTR 30.0%
!! ATTCGTACACCATTGATTTA+CGG + chr2_4:61209572-61209591 Msa0339930:three_prime_UTR 30.0%
ATGTACTTTCCGTAAATCAA+TGG - chr2_4:61209584-61209603 None:intergenic 30.0%
! TGATTTACGGAAAGTACATT+TGG + chr2_4:61209585-61209604 Msa0339930:three_prime_UTR 30.0%
CTATAGATATCTCATTAGCA+AGG + chr2_4:61209669-61209688 Msa0339930:three_prime_UTR 30.0%
! TCAACAACTCTCACACATTT+TGG + chr2_4:61204925-61204944 Msa0339930:five_prime_UTR 35.0%
GTATAACCGAGTTCAATTCT+TGG - chr2_4:61205716-61205735 None:intergenic 35.0%
!! TAATGTGGGATTAGTTGTAG+AGG + chr2_4:61205932-61205951 Msa0339930:intron 35.0%
!!! CAAAAGGGTATTTTCAAAGC+TGG + chr2_4:61206118-61206137 Msa0339930:five_prime_UTR 35.0%
! TATTTTCAAAGCTGGTGCAT+TGG + chr2_4:61206126-61206145 Msa0339930:five_prime_UTR 35.0%
ATGAGTAGAAAACCTGTTGA+TGG + chr2_4:61206204-61206223 Msa0339930:CDS 35.0%
TGAGTAGAAAACCTGTTGAT+GGG + chr2_4:61206205-61206224 Msa0339930:CDS 35.0%
! TACGACAAAGAAGAGTTTTC+AGG - chr2_4:61206237-61206256 None:intergenic 35.0%
GAGGCAGACAAATCTTTAAA+AGG + chr2_4:61206288-61206307 Msa0339930:CDS 35.0%
AAAGGCAAACAACTTGTAGA+AGG + chr2_4:61206325-61206344 Msa0339930:CDS 35.0%
AAGGCAAACAACTTGTAGAA+GGG + chr2_4:61206326-61206345 Msa0339930:CDS 35.0%
AAGCACATGAAAACTTTACC+AGG + chr2_4:61206372-61206391 Msa0339930:CDS 35.0%
TTTACCAGGTTATTTGGAGA+GGG + chr2_4:61206386-61206405 Msa0339930:CDS 35.0%
TACTAGAAGATGTTGAGCTT+CGG - chr2_4:61206512-61206531 None:intergenic 35.0%
! ATTCTAGAAGGGGTCTAAAT+TGG + chr2_4:61206571-61206590 Msa0339930:CDS 35.0%
AGGATCTGACAGCTATATAA+TGG - chr2_4:61206665-61206684 None:intergenic 35.0%
AATCGTCTGAATCTAAGAGA+TGG + chr2_4:61206702-61206721 Msa0339930:CDS 35.0%
ACATACAGCGAAAAAATGTC+CGG + chr2_4:61206739-61206758 Msa0339930:CDS 35.0%
TATACTAGTAGGATGGTTTC+GGG - chr2_4:61206781-61206800 None:intergenic 35.0%
! GTATATTGAAAGGTTCTGAC+AGG + chr2_4:61206796-61206815 Msa0339930:CDS 35.0%
GTTAATGCACATGATATGCT+TGG + chr2_4:61206969-61206988 Msa0339930:CDS 35.0%
! TTTTTATGAGGGTTGTCTCT+AGG - chr2_4:61207023-61207042 None:intergenic 35.0%
TGACTTTCTCTAAGTTCATC+TGG - chr2_4:61207185-61207204 None:intergenic 35.0%
! TTTGAAACTTTCGGCATCAA+TGG - chr2_4:61207234-61207253 None:intergenic 35.0%
!! GGTTCTGAAAAAGTAGAAAC+AGG - chr2_4:61207260-61207279 None:intergenic 35.0%
! GTTTCTCAGTAGTTACTTTC+TGG - chr2_4:61207400-61207419 None:intergenic 35.0%
GGCTTCACAAATAAAGTTTC+TGG + chr2_4:61207461-61207480 Msa0339930:CDS 35.0%
!! TAAAGTTTCTGGCTGTAAAG+AGG + chr2_4:61207472-61207491 Msa0339930:CDS 35.0%
TTCTGAACTAGGTTTATGTG+TGG - chr2_4:61207528-61207547 None:intergenic 35.0%
AAAGATTCAGAAAATGCGAG+AGG + chr2_4:61207698-61207717 Msa0339930:CDS 35.0%
AACATTTCAGGCAACAAATC+AGG + chr2_4:61207734-61207753 Msa0339930:CDS 35.0%
GATCAAGTAACCTCCTTAAA+GGG - chr2_4:61207784-61207803 None:intergenic 35.0%
TCTGTGGTTACAAATAAGAG+TGG + chr2_4:61207863-61207882 Msa0339930:CDS 35.0%
TGGTTACAAATAAGAGTGGT+AGG + chr2_4:61207867-61207886 Msa0339930:CDS 35.0%
ACCTGAAAAAGAATTGGACA+AGG + chr2_4:61207919-61207938 Msa0339930:CDS 35.0%
! TCCTTGTCCAATTCTTTTTC+AGG - chr2_4:61207923-61207942 None:intergenic 35.0%
CTGAGAATATCCATGAAGAA+TGG + chr2_4:61208025-61208044 Msa0339930:CDS 35.0%
CCAACAGCAAATGTAAAAAG+GGG - chr2_4:61208055-61208074 None:intergenic 35.0%
GCCAACAGCAAATGTAAAAA+GGG - chr2_4:61208056-61208075 None:intergenic 35.0%
TGCCAACAGCAAATGTAAAA+AGG - chr2_4:61208057-61208076 None:intergenic 35.0%
AGGGAGGTTAAAAAGAAGAA+TGG + chr2_4:61208166-61208185 Msa0339930:CDS 35.0%
TGCGTATAACTGATAGCTTT+GGG - chr2_4:61208418-61208437 None:intergenic 35.0%
ATGCGTATAACTGATAGCTT+TGG - chr2_4:61208419-61208438 None:intergenic 35.0%
AGATCTATTACAGGTAACAG+TGG + chr2_4:61208453-61208472 Msa0339930:CDS 35.0%
TCTGCACGTTTGATTATTGT+TGG - chr2_4:61208605-61208624 None:intergenic 35.0%
TCAATGGAAGAGAAAATACC+TGG - chr2_4:61208678-61208697 None:intergenic 35.0%
GCTATGAATGCTAAATACAG+GGG + chr2_4:61208781-61208800 Msa0339930:intron 35.0%
GGGAAAAATTGAAAACAGGA+CGG - chr2_4:61208827-61208846 None:intergenic 35.0%
AAAGCTACTGAATATACTCC+AGG - chr2_4:61208858-61208877 None:intergenic 35.0%
! GGAGTATATTCAGTAGCTTT+TGG + chr2_4:61208858-61208877 Msa0339930:CDS 35.0%
TTGATCCAGAAAGTTCGTAA+GGG - chr2_4:61208944-61208963 None:intergenic 35.0%
!! GAATCTCTATTGGTTCAAAC+AGG + chr2_4:61208993-61209012 Msa0339930:CDS 35.0%
GTTCAAACAGGTGAACTAAA+GGG + chr2_4:61209005-61209024 Msa0339930:CDS 35.0%
AAAATTTAGACCCTTCCAAC+TGG - chr2_4:61209086-61209105 None:intergenic 35.0%
!! TCATTTTTGTCTCATTCACC+TGG + chr2_4:61209305-61209324 Msa0339930:three_prime_UTR 35.0%
ACATGATTTATTGGTCAACC+AGG - chr2_4:61209326-61209345 None:intergenic 35.0%
GTAAGTGACCACATTCAAAA+TGG + chr2_4:61209370-61209389 Msa0339930:three_prime_UTR 35.0%
!! TCAAGAAGCCATTTTGAATG+TGG - chr2_4:61209381-61209400 None:intergenic 35.0%
TACTAAGCCTGATTTCCAAA+AGG + chr2_4:61209430-61209449 Msa0339930:three_prime_UTR 35.0%
ACTAAGCCTGATTTCCAAAA+GGG + chr2_4:61209431-61209450 Msa0339930:three_prime_UTR 35.0%
AATGAGATATCTATAGACCG+AGG - chr2_4:61209665-61209684 None:intergenic 35.0%
! GTACCAAAGGCATATTAATC+TGG + chr2_4:61209698-61209717 Msa0339930:three_prime_UTR 35.0%
!! GTTACGACGTCGTTTTCTAA+CGG + chr2_4:61205026-61205045 Msa0339930:five_prime_UTR 40.0%
CGGAAAAATAGGACCTTGTT+TGG - chr2_4:61205180-61205199 None:intergenic 40.0%
!!! AACTCAAGTGGAGCGTTTTT+TGG - chr2_4:61205496-61205515 None:intergenic 40.0%
GTTGTAGCTCAAAACTCAAG+TGG - chr2_4:61205508-61205527 None:intergenic 40.0%
ATGGAGCTCAGAATAGGTAA+AGG - chr2_4:61205530-61205549 None:intergenic 40.0%
ATCACAATGGAGCTCAGAAT+AGG - chr2_4:61205536-61205555 None:intergenic 40.0%
TGTTGAAAGGGTAGGTAGTT+CGG + chr2_4:61205652-61205671 Msa0339930:intron 40.0%
ATCCACCCAAGAATTGAACT+CGG + chr2_4:61205707-61205726 Msa0339930:intron 40.0%
! CTGAATGATTCGTCTTTTGG+TGG + chr2_4:61205735-61205754 Msa0339930:intron 40.0%
! AACAGGTTTTCTACTCATGC+TGG - chr2_4:61206202-61206221 None:intergenic 40.0%
CTTTACCAGGTTATTTGGAG+AGG + chr2_4:61206385-61206404 Msa0339930:CDS 40.0%
TTACCAGGTTATTTGGAGAG+GGG + chr2_4:61206387-61206406 Msa0339930:CDS 40.0%
CAACATTCAAAGCTTTCTCC+GGG - chr2_4:61206422-61206441 None:intergenic 40.0%
CCAACATTCAAAGCTTTCTC+CGG - chr2_4:61206423-61206442 None:intergenic 40.0%
!! CGGAGAAAGCTTTGAATGTT+GGG + chr2_4:61206421-61206440 Msa0339930:CDS 40.0%
!! GGAGAAAGCTTTGAATGTTG+GGG + chr2_4:61206422-61206441 Msa0339930:CDS 40.0%
ATCAACTTCTATCCGTACTG+AGG + chr2_4:61206536-61206555 Msa0339930:CDS 40.0%
TACCACATAAGTCCTCAGTA+CGG - chr2_4:61206551-61206570 None:intergenic 40.0%
!! AGTGAGATTGCACTGATTGT+GGG - chr2_4:61206620-61206639 None:intergenic 40.0%
ATCAGTGCAATCTCACTCTA+TGG + chr2_4:61206623-61206642 Msa0339930:CDS 40.0%
TATATAGCTGTCAGATCCTC+TGG + chr2_4:61206666-61206685 Msa0339930:CDS 40.0%
GGGAAAGATGATCAATAGTC+CGG - chr2_4:61206761-61206780 None:intergenic 40.0%
TCCTGATATGCAAACAACCT+TGG + chr2_4:61207058-61207077 Msa0339930:CDS 40.0%
TCCAAGGTTGTTTGCATATC+AGG - chr2_4:61207062-61207081 None:intergenic 40.0%
ACAACCTTGGATCAGAAGTT+AGG + chr2_4:61207071-61207090 Msa0339930:CDS 40.0%
! TATGTACAGGAGGGTTGATT+CGG - chr2_4:61207128-61207147 None:intergenic 40.0%
ATTGCGAGTCAGATATGTAC+AGG - chr2_4:61207141-61207160 None:intergenic 40.0%
ACTAGGTTTATGTGTGGCTA+CGG - chr2_4:61207522-61207541 None:intergenic 40.0%
! CCTCTCACATTTTCTGAACT+AGG - chr2_4:61207539-61207558 None:intergenic 40.0%
CCTAGTTCAGAAAATGTGAG+AGG + chr2_4:61207536-61207555 Msa0339930:CDS 40.0%
AGTGATAAACCTGGAAATGC+TGG + chr2_4:61207584-61207603 Msa0339930:CDS 40.0%
GATCAAGGAATCTCCTCAAA+GGG - chr2_4:61207625-61207644 None:intergenic 40.0%
! ATCTTTTTGCGATACCTCCA+TGG - chr2_4:61207684-61207703 None:intergenic 40.0%
GAAAATGCGAGAGGTTATGT+TGG + chr2_4:61207707-61207726 Msa0339930:CDS 40.0%
GGATCAAGTAACCTCCTTAA+AGG - chr2_4:61207785-61207804 None:intergenic 40.0%
ACAAATAAGAGTGGTAGGTC+AGG + chr2_4:61207872-61207891 Msa0339930:CDS 40.0%
TTGTTCCACAGTTAACACTG+CGG + chr2_4:61207955-61207974 Msa0339930:CDS 40.0%
!!! CCCCTTTTTACATTTGCTGT+TGG + chr2_4:61208052-61208071 Msa0339930:CDS 40.0%
AACTGCATTCACCTTGTCTT+GGG - chr2_4:61208123-61208142 None:intergenic 40.0%
GCTTCATTTGAGCAATGACA+TGG - chr2_4:61208240-61208259 None:intergenic 40.0%
! CTTTTGTGATAGAGTCCACA+CGG - chr2_4:61208300-61208319 None:intergenic 40.0%
ACTAAAGCAAGGAGATACTC+AGG + chr2_4:61208342-61208361 Msa0339930:CDS 40.0%
GTTCATAGTCTTCCAAGTGA+TGG + chr2_4:61208490-61208509 Msa0339930:CDS 40.0%
! TCAGTATGAGCTTTTCTTCC+AGG + chr2_4:61208657-61208676 Msa0339930:CDS 40.0%
GTTCTCCATTTGCATTGCAA+TGG + chr2_4:61208905-61208924 Msa0339930:CDS 40.0%
ATCCACCATTGCAATGCAAA+TGG - chr2_4:61208913-61208932 None:intergenic 40.0%
! ATTTGCATTGCAATGGTGGA+TGG + chr2_4:61208912-61208931 Msa0339930:CDS 40.0%
AAACTCCCTTACGAACTTTC+TGG + chr2_4:61208936-61208955 Msa0339930:CDS 40.0%
CTTGATCCAGAAAGTTCGTA+AGG - chr2_4:61208945-61208964 None:intergenic 40.0%
GGTTCAAACAGGTGAACTAA+AGG + chr2_4:61209004-61209023 Msa0339930:CDS 40.0%
GTTATTCTTACGTGCTGCAT+AGG + chr2_4:61209180-61209199 Msa0339930:three_prime_UTR 40.0%
!! TCAACTCCCTTTTGGAAATC+AGG - chr2_4:61209440-61209459 None:intergenic 40.0%
! CTCAATTGTCAACTCCCTTT+TGG - chr2_4:61209448-61209467 None:intergenic 40.0%
TGGAACATACGAAGTTGCAA+AGG + chr2_4:61209605-61209624 Msa0339930:three_prime_UTR 40.0%
GTTGCAAAGGTTGAAAAAGC+AGG + chr2_4:61209618-61209637 Msa0339930:three_prime_UTR 40.0%
AGCAAGGATGATTGTACCAA+AGG + chr2_4:61209685-61209704 Msa0339930:three_prime_UTR 40.0%
! AACACTCAACGACGTCGTTT+TGG + chr2_4:61204975-61204994 Msa0339930:five_prime_UTR 45.0%
! TGGAAGGAAGGAAAGAGTGT+CGG - chr2_4:61205054-61205073 None:intergenic 45.0%
AGAAGCGAGAAATGGAAGGA+AGG - chr2_4:61205066-61205085 None:intergenic 45.0%
GGGTGGATCAGTTATTTGCA+AGG - chr2_4:61205695-61205714 None:intergenic 45.0%
AACCGAGTTCAATTCTTGGG+TGG - chr2_4:61205712-61205731 None:intergenic 45.0%
! CATGCTGGTGGATAACTTTC+AGG - chr2_4:61206187-61206206 None:intergenic 45.0%
! AGGTTTTCTACTCATGCTGG+TGG - chr2_4:61206199-61206218 None:intergenic 45.0%
TCAGGTTTGAACCCATCAAC+AGG - chr2_4:61206219-61206238 None:intergenic 45.0%
TCGTGAAGTTACCAAAGACG+AGG + chr2_4:61206269-61206288 Msa0339930:CDS 45.0%
AGATTTGTCTGCCTCGTCTT+TGG - chr2_4:61206283-61206302 None:intergenic 45.0%
!! CCGGAGAAAGCTTTGAATGT+TGG + chr2_4:61206420-61206439 Msa0339930:CDS 45.0%
TGAATGTTGGGGTCCTTGAT+TGG + chr2_4:61206433-61206452 Msa0339930:CDS 45.0%
ATCCGTACTGAGGACTTATG+TGG + chr2_4:61206546-61206565 Msa0339930:CDS 45.0%
! ATTGGTCTCCTTCTCGTCAA+AGG + chr2_4:61206589-61206608 Msa0339930:CDS 45.0%
GGGATTATCCTTTGACGAGA+AGG - chr2_4:61206600-61206619 None:intergenic 45.0%
!! GAGTGAGATTGCACTGATTG+TGG - chr2_4:61206621-61206640 None:intergenic 45.0%
ATTTCCAGCATTCTCTCCAG+AGG - chr2_4:61206685-61206704 None:intergenic 45.0%
GAGCACGCAAGATGATCAAA+TGG + chr2_4:61206908-61206927 Msa0339930:CDS 45.0%
GCTTCCTAACTTCTGATCCA+AGG - chr2_4:61207078-61207097 None:intergenic 45.0%
CGAGTCAGATATGTACAGGA+GGG - chr2_4:61207137-61207156 None:intergenic 45.0%
TCTCTAAGTTCATCTGGCAG+AGG - chr2_4:61207179-61207198 None:intergenic 45.0%
ACTAGGTTGTGACTCTTGCT+GGG - chr2_4:61207210-61207229 None:intergenic 45.0%
AACTAGGTTGTGACTCTTGC+TGG - chr2_4:61207211-61207230 None:intergenic 45.0%
CTTTCGGCATCAATGGAACT+AGG - chr2_4:61207227-61207246 None:intergenic 45.0%
TGGACTCATTCCCATTCTGA+CGG - chr2_4:61207297-61207316 None:intergenic 45.0%
GAGTCCATGCAGATCTAGAA+AGG + chr2_4:61207310-61207329 Msa0339930:CDS 45.0%
! ACTTTCTGGTCTACTTCCGT+AGG - chr2_4:61207386-61207405 None:intergenic 45.0%
TTTCCAGGTTTATCACTGCC+TGG - chr2_4:61207581-61207600 None:intergenic 45.0%
!!! CTGTTTTTGCCAGCATTTCC+AGG - chr2_4:61207596-61207615 None:intergenic 45.0%
CTGGAAATGCTGGCAAAAAC+AGG + chr2_4:61207594-61207613 Msa0339930:CDS 45.0%
GGATCAAGGAATCTCCTCAA+AGG - chr2_4:61207626-61207645 None:intergenic 45.0%
TTGGTTTCACCAGTGGATCA+AGG - chr2_4:61207640-61207659 None:intergenic 45.0%
TGATCCACTGGTGAAACCAA+AGG + chr2_4:61207640-61207659 Msa0339930:CDS 45.0%
!! TTATGGCAGTTTGCTGCCTT+TGG - chr2_4:61207659-61207678 None:intergenic 45.0%
AGCAAACTGCCATAACTCCA+TGG + chr2_4:61207664-61207683 Msa0339930:CDS 45.0%
AAACTGCCATAACTCCATGG+AGG + chr2_4:61207667-61207686 Msa0339930:CDS 45.0%
AAGTAACCTCCTTAAAGGGC+TGG - chr2_4:61207780-61207799 None:intergenic 45.0%
TGATCCACTGCTGAAACCTA+AGG + chr2_4:61207799-61207818 Msa0339930:CDS 45.0%
AAGAGTGGTAGGTCAGGTAA+TGG + chr2_4:61207878-61207897 Msa0339930:CDS 45.0%
AGAGTGGTAGGTCAGGTAAT+GGG + chr2_4:61207879-61207898 Msa0339930:CDS 45.0%
AAGAATTGGACAAGGACCAG+AGG + chr2_4:61207927-61207946 Msa0339930:CDS 45.0%
CAATTCCGCAGTGTTAACTG+TGG - chr2_4:61207963-61207982 None:intergenic 45.0%
CAACTGCATTCACCTTGTCT+TGG - chr2_4:61208124-61208143 None:intergenic 45.0%
GGAAGTCGGACAAATAACAC+AGG + chr2_4:61208187-61208206 Msa0339930:CDS 45.0%
ATGACATGGCGAACGTAATC+AGG - chr2_4:61208226-61208245 None:intergenic 45.0%
TTCAAATAGCCAGAACCGTG+TGG + chr2_4:61208282-61208301 Msa0339930:CDS 45.0%
AAAGCAAGGAGATACTCAGG+TGG + chr2_4:61208345-61208364 Msa0339930:CDS 45.0%
CATAGTCTTCCAAGTGATGG+TGG + chr2_4:61208493-61208512 Msa0339930:CDS 45.0%
!! CTTATTGAGCGCTGGAAAAC+TGG + chr2_4:61208526-61208545 Msa0339930:CDS 45.0%
CAAATGGAGAACGCTTGCAA+GGG - chr2_4:61208897-61208916 None:intergenic 45.0%
CTCCATTTGCATTGCAATGG+TGG + chr2_4:61208908-61208927 Msa0339930:CDS 45.0%
TGGATCAAGAAACTCCATCG+AGG + chr2_4:61208956-61208975 Msa0339930:CDS 45.0%
GGATCAAGAAACTCCATCGA+GGG + chr2_4:61208957-61208976 Msa0339930:CDS 45.0%
GAATCAGGCGGAATCTCTAT+TGG + chr2_4:61208983-61209002 Msa0339930:CDS 45.0%
ACAGGTGAACTAAAGGGTCA+TGG + chr2_4:61209011-61209030 Msa0339930:CDS 45.0%
GATCGAGTTATGAGCTTGCA+AGG - chr2_4:61209212-61209231 None:intergenic 45.0%
GAGATATCTATAGACCGAGG+AGG - chr2_4:61209662-61209681 None:intergenic 45.0%
!! ATATATTAATATCAAATAAA+GGG - chr2_4:61205961-61205980 None:intergenic 5.0%
!! AATATATTAATATCAAATAA+AGG - chr2_4:61205962-61205981 None:intergenic 5.0%
CCTTCCATTTCTCGCTTCTC+CGG + chr2_4:61205067-61205086 Msa0339930:five_prime_UTR 50.0%
GTTACCGGAGAAGCGAGAAA+TGG - chr2_4:61205074-61205093 None:intergenic 50.0%
TGAAAGGGTAGGTAGTTCGG+TGG + chr2_4:61205655-61205674 Msa0339930:intron 50.0%
TCTCCCCTCTCCAAATAACC+TGG - chr2_4:61206393-61206412 None:intergenic 50.0%
GGAGAGGGGAGAAAAAATCC+CGG + chr2_4:61206401-61206420 Msa0339930:CDS 50.0%
! GTTCCAGACTGGTCCAATCA+AGG - chr2_4:61206449-61206468 None:intergenic 50.0%
! ATTGGACCAGTCTGGAACGT+TGG + chr2_4:61206451-61206470 Msa0339930:CDS 50.0%
TTGAGCTTCGGCTACTTCTG+GGG - chr2_4:61206500-61206519 None:intergenic 50.0%
GTTGAGCTTCGGCTACTTCT+GGG - chr2_4:61206501-61206520 None:intergenic 50.0%
TGTTGAGCTTCGGCTACTTC+TGG - chr2_4:61206502-61206521 None:intergenic 50.0%
! AGATCCTCTGGAGAGAATGC+TGG + chr2_4:61206678-61206697 Msa0339930:CDS 50.0%
GTGGCATCTTGTCACATGAC+CGG + chr2_4:61206850-61206869 Msa0339930:CDS 50.0%
GGCAGCTTCACATGCTAAGT+TGG + chr2_4:61206881-61206900 Msa0339930:CDS 50.0%
GCGAGTCAGATATGTACAGG+AGG - chr2_4:61207138-61207157 None:intergenic 50.0%
AAGTTCATCTGGCAGAGGAC+AGG - chr2_4:61207174-61207193 None:intergenic 50.0%
! ATTCCCATTCTGACGGGTAC+GGG - chr2_4:61207290-61207309 None:intergenic 50.0%
! CATTCCCATTCTGACGGGTA+CGG - chr2_4:61207291-61207310 None:intergenic 50.0%
GGACTCATTCCCATTCTGAC+GGG - chr2_4:61207296-61207315 None:intergenic 50.0%
TCGGCCTTTCTAGATCTGCA+TGG - chr2_4:61207317-61207336 None:intergenic 50.0%
ATGCAGATCTAGAAAGGCCG+AGG + chr2_4:61207316-61207335 Msa0339930:CDS 50.0%
GATCTAGAAAGGCCGAGGAA+AGG + chr2_4:61207321-61207340 Msa0339930:CDS 50.0%
AACAGTGCGCTTCCTTTCCT+CGG - chr2_4:61207336-61207355 None:intergenic 50.0%
CTCTGCAAATGCACCTCCTA+CGG + chr2_4:61207367-61207386 Msa0339930:CDS 50.0%
TTCTGGTCTACTTCCGTAGG+AGG - chr2_4:61207383-61207402 None:intergenic 50.0%
CGGAAAGGTGAAGAGCTTCT+TGG - chr2_4:61207422-61207441 None:intergenic 50.0%
CTGAAGCTAAGTCGACGGAA+AGG - chr2_4:61207437-61207456 None:intergenic 50.0%
CCATGCTGAAGCTAAGTCGA+CGG - chr2_4:61207442-61207461 None:intergenic 50.0%
!! CGTCGACTTAGCTTCAGCAT+GGG + chr2_4:61207440-61207459 Msa0339930:CDS 50.0%
CATGCTAGCTCAAACATGCC+AGG + chr2_4:61207560-61207579 Msa0339930:CDS 50.0%
ATGCCAGGCAGTGATAAACC+TGG + chr2_4:61207575-61207594 Msa0339930:CDS 50.0%
AAAACAGGTCCAGCCCTTTG+AGG + chr2_4:61207609-61207628 Msa0339930:CDS 50.0%
AAGGAATCTCCTCAAAGGGC+TGG - chr2_4:61207621-61207640 None:intergenic 50.0%
GAGGAGATTCCTTGATCCAC+TGG + chr2_4:61207628-61207647 Msa0339930:CDS 50.0%
GCGATACCTCCATGGAGTTA+TGG - chr2_4:61207676-61207695 None:intergenic 50.0%
AAAGCAGGTCCAGCCCTTTA+AGG + chr2_4:61207768-61207787 Msa0339930:CDS 50.0%
!! TGATGGCAGTTTGCTGCCTT+AGG - chr2_4:61207818-61207837 None:intergenic 50.0%
TTGGACAAGGACCAGAGGTT+TGG + chr2_4:61207932-61207951 Msa0339930:CDS 50.0%
CTGTGGAACAACCAAACCTC+TGG - chr2_4:61207946-61207965 None:intergenic 50.0%
AGTAGAGCTTGAGACGTCGA+AGG - chr2_4:61208007-61208026 None:intergenic 50.0%
AAGGGGCTGACCATTCTTCA+TGG - chr2_4:61208038-61208057 None:intergenic 50.0%
GGTTGAGTACTTCACTGTGG+CGG - chr2_4:61208098-61208117 None:intergenic 50.0%
GACGGTTGAGTACTTCACTG+TGG - chr2_4:61208101-61208120 None:intergenic 50.0%
TACTCAACCGTCCCAAGACA+AGG + chr2_4:61208109-61208128 Msa0339930:CDS 50.0%
GCATTCACCTTGTCTTGGGA+CGG - chr2_4:61208119-61208138 None:intergenic 50.0%
TGATAGAGTCCACACGGTTC+TGG - chr2_4:61208294-61208313 None:intergenic 50.0%
ATAGCAGCAAGCTCGTCATC+TGG - chr2_4:61208382-61208401 None:intergenic 50.0%
GTAACAGTGGTGCTTCCAAG+CGG + chr2_4:61208466-61208485 Msa0339930:CDS 50.0%
GGAAGACTATGAACTCCGCT+TGG - chr2_4:61208484-61208503 None:intergenic 50.0%
!! ATTGAGCGCTGGAAAACTGG+TGG + chr2_4:61208529-61208548 Msa0339930:CDS 50.0%
! ACTGGTGGATCCTGTGATTG+CGG + chr2_4:61208544-61208563 Msa0339930:CDS 50.0%
ATCCTGTGATTGCGGAGGTT+GGG + chr2_4:61208552-61208571 Msa0339930:CDS 50.0%
TGATTGCGGAGGTTGGGATT+TGG + chr2_4:61208558-61208577 Msa0339930:CDS 50.0%
GCAAATGGAGAACGCTTGCA+AGG - chr2_4:61208898-61208917 None:intergenic 50.0%
CTCCATCGAGGGAAAGAATC+AGG + chr2_4:61208968-61208987 Msa0339930:CDS 50.0%
CATCGAGGGAAAGAATCAGG+CGG + chr2_4:61208971-61208990 Msa0339930:CDS 50.0%
AACTGGAGAGACAGGAGGAT+AGG - chr2_4:61209069-61209088 None:intergenic 50.0%
TATCCTCCTGTCTCTCCAGT+TGG + chr2_4:61209068-61209087 Msa0339930:CDS 50.0%
TCCTGTCTCTCCAGTTGGAA+GGG + chr2_4:61209073-61209092 Msa0339930:CDS 50.0%
TATATGCCGCTAGTCCTCCT+CGG + chr2_4:61209645-61209664 Msa0339930:three_prime_UTR 50.0%
TATAGACCGAGGAGGACTAG+CGG - chr2_4:61209654-61209673 None:intergenic 50.0%
CCGGAGAAGCGAGAAATGGA+AGG - chr2_4:61205070-61205089 None:intergenic 55.0%
GGTCCTTGATTGGACCAGTC+TGG + chr2_4:61206443-61206462 Msa0339930:CDS 55.0%
GTACTGCCAACGTTCCAGAC+TGG - chr2_4:61206460-61206479 None:intergenic 55.0%
TGAGCTTCGGCTACTTCTGG+GGG - chr2_4:61206499-61206518 None:intergenic 55.0%
GTCACATGACCGGACTTACG+AGG + chr2_4:61206860-61206879 Msa0339930:CDS 55.0%
GTGAAGCTGCCTCGTAAGTC+CGG - chr2_4:61206872-61206891 None:intergenic 55.0%
!! CCGTCGACTTAGCTTCAGCA+TGG + chr2_4:61207439-61207458 Msa0339930:CDS 55.0%
TATGTGTGGCTACGGAGCTC+TGG - chr2_4:61207514-61207533 None:intergenic 55.0%
! GCTGCCTTTGGTTTCACCAG+TGG - chr2_4:61207647-61207666 None:intergenic 55.0%
! GGCAACAAATCAGGTGCTGC+TGG + chr2_4:61207743-61207762 Msa0339930:CDS 55.0%
!! CAGGTGCTGCTGGTAAAAGC+AGG + chr2_4:61207753-61207772 Msa0339930:CDS 55.0%
GCTGCCTTAGGTTTCAGCAG+TGG - chr2_4:61207806-61207825 None:intergenic 55.0%
GACGAAGGTCCACCATCACT+TGG - chr2_4:61208505-61208524 None:intergenic 55.0%
CAGCGCTCAATAAGCGACGA+AGG - chr2_4:61208520-61208539 None:intergenic 55.0%
CTTCGTCGCTTATTGAGCGC+TGG + chr2_4:61208518-61208537 Msa0339930:CDS 55.0%
GATCCTGTGATTGCGGAGGT+TGG + chr2_4:61208551-61208570 Msa0339930:CDS 55.0%
ATCCCAACCTCCGCAATCAC+AGG - chr2_4:61208557-61208576 None:intergenic 55.0%
CGCCTGATTCTTTCCCTCGA+TGG - chr2_4:61208973-61208992 None:intergenic 55.0%
! GGATAGGCAGCGTAACTTGC+AGG - chr2_4:61209053-61209072 None:intergenic 55.0%
CTTCCAACTGGAGAGACAGG+AGG - chr2_4:61209074-61209093 None:intergenic 55.0%
CTCCTGTCTCTCCAGTTGGA+AGG + chr2_4:61209072-61209091 Msa0339930:CDS 55.0%
ACCCTTCCAACTGGAGAGAC+AGG - chr2_4:61209077-61209096 None:intergenic 55.0%
! GGGTAGGTAGTTCGGTGGAG+TGG + chr2_4:61205660-61205679 Msa0339930:intron 60.0%
GAGCTTCGGCTACTTCTGGG+GGG - chr2_4:61206498-61206517 None:intergenic 60.0%
GCACCCGTACCCGTCAGAAT+GGG + chr2_4:61207284-61207303 Msa0339930:CDS 60.0%
! GCAGGTCCAGCCCTTTAAGG+AGG + chr2_4:61207771-61207790 Msa0339930:CDS 60.0%
GGTGGATCCTGTGATTGCGG+AGG + chr2_4:61208547-61208566 Msa0339930:CDS 60.0%
GGCACCCGTACCCGTCAGAA+TGG + chr2_4:61207283-61207302 Msa0339930:CDS 65.0%
!! CTGACGGGTACGGGTGCCGA+AGG - chr2_4:61207281-61207300 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 61204873 61209721 61204873 ID=Msa0339930;Name=Msa0339930
chr2_4 mRNA 61204873 61209721 61204873 ID=Msa0339930-mRNA-1;Parent=Msa0339930;Name=Msa0339930-mRNA-1;_AED=0.07;_eAED=0.07;_QI=350|1|1|1|0.5|0.33|3|621|924
chr2_4 exon 61204873 61205088 61204873 ID=Msa0339930-mRNA-1:exon:19154;Parent=Msa0339930-mRNA-1
chr2_4 exon 61206070 61208678 61206070 ID=Msa0339930-mRNA-1:exon:19155;Parent=Msa0339930-mRNA-1
chr2_4 exon 61208801 61209721 61208801 ID=Msa0339930-mRNA-1:exon:19156;Parent=Msa0339930-mRNA-1
chr2_4 five_prime_UTR 61204873 61205088 61204873 ID=Msa0339930-mRNA-1:five_prime_utr;Parent=Msa0339930-mRNA-1
chr2_4 five_prime_UTR 61206070 61206203 61206070 ID=Msa0339930-mRNA-1:five_prime_utr;Parent=Msa0339930-mRNA-1
chr2_4 CDS 61206204 61208678 61206204 ID=Msa0339930-mRNA-1:cds;Parent=Msa0339930-mRNA-1
chr2_4 CDS 61208801 61209100 61208801 ID=Msa0339930-mRNA-1:cds;Parent=Msa0339930-mRNA-1
chr2_4 three_prime_UTR 61209101 61209721 61209101 ID=Msa0339930-mRNA-1:three_prime_utr;Parent=Msa0339930-mRNA-1
Gene Sequence

>Msa0339930

ATGAGTAGAAAACCTGTTGATGGGTTCAAACCTGAAAACTCTTCTTTGTCGTACGCTGATTTTCATCGTGAAGTTACCAAAGACGAGGCAGACAAATCTTTAAAAGGTTTTTCGAATCAACAAAGGCAAACAACTTGTAGAAGGGAAAATGATGAAGATGAGCTTGTTAAGCACATGAAAACTTTACCAGGTTATTTGGAGAGGGGAGAAAAAATCCCGGAGAAAGCTTTGAATGTTGGGGTCCTTGATTGGACCAGTCTGGAACGTTGGCAGTACAGCAATAAACTTGTACCCCCCAGAAGTAGCCGAAGCTCAACATCTTCTAGTAATACATCAACTTCTATCCGTACTGAGGACTTATGTGGTAATTCTAGAAGGGGTCTAAATTGGTCTCCTTCTCGTCAAAGGATAATCCCACAATCAGTGCAATCTCACTCTATGGCTTCTACAAAGCAAGACCATTATATAGCTGTCAGATCCTCTGGAGAGAATGCTGGAAATCGTCTGAATCTAAGAGATGGCAACAGTAGTATTGACATACAGCGAAAAAATGTCCGGACTATTGATCATCTTTCCCGAAACCATCCTACTAGTATATTGAAAGGTTCTGACAGGAAACATTTACATCCACATATTATTAAGGAAAGTGGCATCTTGTCACATGACCGGACTTACGAGGCAGCTTCACATGCTAAGTTGGAAATGAGCACGCAAGATGATCAAATGGAAAAGAAAAAGGGGAATTTAAGAGAACAAAGTAGTGGTGTTAATGCACATGATATGCTTGGGAAAAGCAAACCAATTGTTCTTATATTACCTAGAGACAACCCTCATAAAAACAATCACTGTAGAGCTCCTGATATGCAAACAACCTTGGATCAGAAGTTAGGAAGCCATAGTCAAACAAGATTATTTGTAAATCCGAATCAACCCTCCTGTACATATCTGACTCGCAATGCTTCACACTCCTGTCCTCTGCCAGATGAACTTAGAGAAAGTCATTCCCAGCAAGAGTCACAACCTAGTTCCATTGATGCCGAAAGTTTCAAAATTCCTGTTTCTACTTTTTCAGAACCTTCGGCACCCGTACCCGTCAGAATGGGAATGAGTCCATGCAGATCTAGAAAGGCCGAGGAAAGGAAGCGCACTGTTGCTGTATCTTGCTCTGCAAATGCACCTCCTACGGAAGTAGACCAGAAAGTAACTACTGAGAAACCAAGAAGCTCTTCACCTTTCCGTCGACTTAGCTTCAGCATGGGCTTCACAAATAAAGTTTCTGGCTGTAAAGAGGTTGCATATGTTTCACACCAGAGCTCCGTAGCCACACATAAACCTAGTTCAGAAAATGTGAGAGGTCATGCTAGCTCAAACATGCCAGGCAGTGATAAACCTGGAAATGCTGGCAAAAACAGGTCCAGCCCTTTGAGGAGATTCCTTGATCCACTGGTGAAACCAAAGGCAGCAAACTGCCATAACTCCATGGAGGTATCGCAAAAAGATTCAGAAAATGCGAGAGGTTATGTTGGTTCAAACATTTCAGGCAACAAATCAGGTGCTGCTGGTAAAAGCAGGTCCAGCCCTTTAAGGAGGTTACTTGATCCACTGCTGAAACCTAAGGCAGCAAACTGCCATCACTCCATAAATTTATTTCAGAAAGAGTCTGTGGTTACAAATAAGAGTGGTAGGTCAGGTAATGGGAAATGTTCCACTATACTACCTGAAAAAGAATTGGACAAGGACCAGAGGTTTGGTTGTTCCACAGTTAACACTGCGGAATTGTCAAGTGAAGAGAAGTATATACCTTCGACGTCTCAAGCTCTACTGAGAATATCCATGAAGAATGGTCAGCCCCTTTTTACATTTGCTGTTGGCAACAATAGCAATATTCTCGCCGCCACAGTGAAGTACTCAACCGTCCCAAGACAAGGTGAATGCAGTTGTATCTATACTTTTTTCACATTTAGGGAGGTTAAAAAGAAGAATGGAAGTCGGACAAATAACACAGGAAAAAGCAAAGGTCCTGATTACGTTCGCCATGTCATTGCTCAAATGAAGCTTTCTGATTTGCACTATGATGATTCAAATAGCCAGAACCGTGTGGACTCTATCACAAAAGAGTTTGTTTTATTTTCTGTAAAACTAAAGCAAGGAGATACTCAGGTGGCTGACTATCAGCCAGATGACGAGCTTGCTGCTATAGTTGTCAAATCACCCAAAGCTATCAGTTATACGCATCAGCATGAATGTCAAGATCTATTACAGGTAACAGTGGTGCTTCCAAGCGGAGTTCATAGTCTTCCAAGTGATGGTGGACCTTCGTCGCTTATTGAGCGCTGGAAAACTGGTGGATCCTGTGATTGCGGAGGTTGGGATTTGGCTTGTAAGCTAAAAATTCTTGCCAACAATAATCAAACGTGCAGAAAATCAAGAACATCAGAAGCTTATTTTGCAGATCAGTATGAGCTTTTCTTCCAGGGGACTGAACAATGTCAAGATAACCGTCCTGTTTTCAATTTTTCCCATTTTGAACCTGGAGTATATTCAGTAGCTTTTGGTTCATCACTTTCACCCTTGCAAGCGTTCTCCATTTGCATTGCAATGGTGGATGGCAAACTCCCTTACGAACTTTCTGGATCAAGAAACTCCATCGAGGGAAAGAATCAGGCGGAATCTCTATTGGTTCAAACAGGTGAACTAAAGGGTCATGGTAAATCTGATGACATTCCTGCAAGTTACGCTGCCTATCCTCCTGTCTCTCCAGTTGGAAGGGTCTAA
Protein sequence

>Msa0339930

MSRKPVDGFKPENSSLSYADFHREVTKDEADKSLKGFSNQQRQTTCRRENDEDELVKHMKTLPGYLERGEKIPEKALNVGVLDWTSLERWQYSNKLVPPRSSRSSTSSSNTSTSIRTEDLCGNSRRGLNWSPSRQRIIPQSVQSHSMASTKQDHYIAVRSSGENAGNRLNLRDGNSSIDIQRKNVRTIDHLSRNHPTSILKGSDRKHLHPHIIKESGILSHDRTYEAASHAKLEMSTQDDQMEKKKGNLREQSSGVNAHDMLGKSKPIVLILPRDNPHKNNHCRAPDMQTTLDQKLGSHSQTRLFVNPNQPSCTYLTRNASHSCPLPDELRESHSQQESQPSSIDAESFKIPVSTFSEPSAPVPVRMGMSPCRSRKAEERKRTVAVSCSANAPPTEVDQKVTTEKPRSSSPFRRLSFSMGFTNKVSGCKEVAYVSHQSSVATHKPSSENVRGHASSNMPGSDKPGNAGKNRSSPLRRFLDPLVKPKAANCHNSMEVSQKDSENARGYVGSNISGNKSGAAGKSRSSPLRRLLDPLLKPKAANCHHSINLFQKESVVTNKSGRSGNGKCSTILPEKELDKDQRFGCSTVNTAELSSEEKYIPSTSQALLRISMKNGQPLFTFAVGNNSNILAATVKYSTVPRQGECSCIYTFFTFREVKKKNGSRTNNTGKSKGPDYVRHVIAQMKLSDLHYDDSNSQNRVDSITKEFVLFSVKLKQGDTQVADYQPDDELAAIVVKSPKAISYTHQHECQDLLQVTVVLPSGVHSLPSDGGPSSLIERWKTGGSCDCGGWDLACKLKILANNNQTCRKSRTSEAYFADQYELFFQGTEQCQDNRPVFNFSHFEPGVYSVAFGSSLSPLQAFSICIAMVDGKLPYELSGSRNSIEGKNQAESLLVQTGELKGHGKSDDIPASYAAYPPVSPVGRV*