Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265030 | XP_013465456.1 | 89.031 | 392 | 38 | 3 | 1 | 392 | 1 | 387 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265030 | A0A072VD16 | 89.031 | 392 | 38 | 3 | 1 | 392 | 1 | 387 | 0.0 | 711 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0223850 | Msa0265030 | 0.882127 | 1.351103e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265030 | MtrunA17_Chr2g0329601 | 89.031 | 392 | 38 | 3 | 1 | 392 | 1 | 387 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0265030 | AT2G43465.1 | 51.269 | 394 | 173 | 6 | 12 | 392 | 1 | 388 | 2.73e-135 | 392 |
| Msa0265030 | AT2G43465.4 | 46.440 | 323 | 154 | 6 | 12 | 321 | 1 | 317 | 2.48e-88 | 270 |
| Msa0265030 | AT2G43465.6 | 46.181 | 288 | 138 | 5 | 12 | 288 | 1 | 282 | 3.69e-78 | 243 |
| Msa0265030 | AT2G43465.2 | 46.181 | 288 | 138 | 5 | 12 | 288 | 1 | 282 | 9.99e-78 | 243 |
| Msa0265030 | AT3G03320.1 | 45.490 | 255 | 102 | 4 | 13 | 261 | 12 | 235 | 2.28e-62 | 201 |
| Msa0265030 | AT2G43465.3 | 42.593 | 216 | 107 | 5 | 12 | 216 | 1 | 210 | 1.27e-46 | 160 |
| Msa0265030 | AT2G43465.5 | 42.593 | 216 | 107 | 5 | 12 | 216 | 1 | 210 | 1.27e-46 | 160 |
Find 110 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAGTTGTCTTTGAAATA+AGG | 0.212708 | 2_2:-65247988 | Msa0265030:CDS |
| GTCTTTGGTGTTTGAAGTTC+AGG | 0.241070 | 2_2:-65249925 | Msa0265030:intron |
| TATTCTATTTGCAGATTCTT+TGG | 0.246504 | 2_2:-65250861 | Msa0265030:intron |
| TGAGGAGAGTGGAGCAGAAT+TGG | 0.255098 | 2_2:+65250999 | None:intergenic |
| TAGGAGCAGCAGTGGTTATT+GGG | 0.260041 | 2_2:-65248733 | Msa0265030:CDS |
| CTCTTGCACTTAATCAATAT+TGG | 0.265965 | 2_2:+65247028 | None:intergenic |
| TAGTCATAGTTGAGTGAAAA+TGG | 0.278219 | 2_2:-65251131 | Msa0265030:exon |
| ATTCCCACTTTCAACATTTC+CGG | 0.291841 | 2_2:+65247114 | None:intergenic |
| GGTTCAACCATACACTTCTT+TGG | 0.294268 | 2_2:-65249445 | Msa0265030:CDS |
| GATTCTCTTAAATAAGTCTT+TGG | 0.315771 | 2_2:-65249940 | Msa0265030:CDS |
| TTCCTTTGAACTCCATGTTC+AGG | 0.335428 | 2_2:-65250548 | Msa0265030:CDS |
| GGTTATTGGGGTTCTCTTGT+TGG | 0.337664 | 2_2:-65248720 | Msa0265030:CDS |
| TTCAGCTCTGTTAAGGTGTA+TGG | 0.338958 | 2_2:-65250801 | Msa0265030:CDS |
| TCTTCAACGCTTTCAATTCC+AGG | 0.346374 | 2_2:+65249762 | None:intergenic |
| GTAGGAGCAGCAGTGGTTAT+TGG | 0.360077 | 2_2:-65248734 | Msa0265030:CDS |
| TTGTGTTTCTTCAGCATAGA+AGG | 0.373463 | 2_2:+65250707 | None:intergenic |
| CTTGGCGGTGGAAGTGCATT+AGG | 0.373793 | 2_2:+65249048 | None:intergenic |
| TGGAGTTGTCTTTGAAATAA+GGG | 0.373802 | 2_2:-65247987 | Msa0265030:CDS |
| TTCCCACTTTCAACATTTCC+GGG | 0.375567 | 2_2:+65247115 | None:intergenic |
| ACTTAATAGCACACTGTTGT+TGG | 0.375610 | 2_2:-65248036 | Msa0265030:CDS |
| GAGGAGAGTGGAGCAGAATT+GGG | 0.376171 | 2_2:+65251000 | None:intergenic |
| ATTAAACCTGGTGTATTTGC+CGG | 0.376759 | 2_2:+65250212 | None:intergenic |
| TTGGGTTCTAGGATTGAATC+AGG | 0.378451 | 2_2:-65249969 | Msa0265030:intron |
| GCTGCTCCTACAGGCATGCT+TGG | 0.385415 | 2_2:+65248746 | None:intergenic |
| TGGGGTTCTCTTGTTGGTAA+TGG | 0.386553 | 2_2:-65248714 | Msa0265030:intron |
| AGTCTTGGAGAAGTTCTTCC+TGG | 0.389906 | 2_2:-65249780 | Msa0265030:CDS |
| GACTGATGGAGCTCGGGCAT+TGG | 0.395909 | 2_2:-65248769 | Msa0265030:CDS |
| ATAAGGGTTGTTGATGGATA+TGG | 0.404606 | 2_2:-65247971 | Msa0265030:CDS |
| AAGAGGATGGGTCATGTTTG+AGG | 0.415272 | 2_2:+65250981 | None:intergenic |
| GAGGGTGTTCAAGGTCTTCT+CGG | 0.416598 | 2_2:-65249096 | Msa0265030:CDS |
| AAAGAAGTGTATGGTTGAAC+CGG | 0.417782 | 2_2:+65249447 | None:intergenic |
| TACATTACATACCTTTAAGC+TGG | 0.423037 | 2_2:+65250512 | None:intergenic |
| GAACTAGTGTTTCCATCCCT+TGG | 0.423110 | 2_2:+65247790 | None:intergenic |
| GACTTGCTTCAGCTCTGTTA+AGG | 0.427192 | 2_2:-65250808 | Msa0265030:CDS |
| TCCTTCATTCTTTGACATGT+TGG | 0.437548 | 2_2:-65249811 | Msa0265030:CDS |
| TTTGAAATAAGGGTTGTTGA+TGG | 0.441020 | 2_2:-65247977 | Msa0265030:CDS |
| GGTGAAGCTGAGTGATTGTT+TGG | 0.450238 | 2_2:-65251077 | Msa0265030:CDS |
| AGAGATTGAGAAGGTGAGAG+TGG | 0.453637 | 2_2:+65251026 | None:intergenic |
| GAGTGACCATCTTCCATGTA+TGG | 0.459157 | 2_2:+65247812 | None:intergenic |
| TGCCTTGACTGATGGAGCTC+GGG | 0.460459 | 2_2:-65248775 | Msa0265030:CDS |
| CTAGGATTGAATCAGGAAAT+CGG | 0.460510 | 2_2:-65249962 | Msa0265030:intron |
| TTGAGCTATGAGGGTGTTCA+AGG | 0.466558 | 2_2:-65249105 | Msa0265030:CDS |
| TTTCTTACACTTAGATTGCA+TGG | 0.466713 | 2_2:+65248997 | None:intergenic |
| TATCTAGGGATTGAGCTATG+AGG | 0.478164 | 2_2:-65249115 | Msa0265030:intron |
| CTCGGTCTAATGCATACCAC+TGG | 0.479936 | 2_2:-65249078 | Msa0265030:CDS |
| TGCTGAAGAAACACAATGAA+TGG | 0.481240 | 2_2:-65250700 | Msa0265030:CDS |
| CAGGAAAATGCCTTGACTGA+TGG | 0.486874 | 2_2:-65248783 | Msa0265030:CDS |
| TTAGAGCCATACATGGAAGA+TGG | 0.494845 | 2_2:-65247818 | Msa0265030:CDS |
| GGTGCACGTTGGACAGAAGA+TGG | 0.496996 | 2_2:-65247950 | Msa0265030:CDS |
| GCACAAATTGATCGTGGAGA+AGG | 0.498948 | 2_2:-65250678 | Msa0265030:CDS |
| ATAACCACTGCTGCTCCTAC+AGG | 0.499741 | 2_2:+65248737 | None:intergenic |
| CTATTTGCAGATTCTTTGGA+AGG | 0.500114 | 2_2:-65250857 | Msa0265030:intron |
| ATCTAGGGATTGAGCTATGA+GGG | 0.502610 | 2_2:-65249114 | Msa0265030:intron |
| TCATCAGTATATAGGGAGTA+AGG | 0.506482 | 2_2:-65249839 | Msa0265030:intron |
| ATGCCTTGACTGATGGAGCT+CGG | 0.511754 | 2_2:-65248776 | Msa0265030:CDS |
| TTCTTACACTTAGATTGCAT+GGG | 0.515980 | 2_2:+65248998 | None:intergenic |
| TGGTAATGATTCTTCTCCAT+TGG | 0.518946 | 2_2:-65251098 | Msa0265030:CDS |
| AAGCTAGCCAAAGAAGTGTA+TGG | 0.520889 | 2_2:+65249438 | None:intergenic |
| GAACCCGGAAATGTTGAAAG+TGG | 0.521501 | 2_2:-65247118 | Msa0265030:three_prime_UTR |
| AAACACTGTTTCAAAACTCC+CGG | 0.524831 | 2_2:-65249466 | Msa0265030:CDS |
| CACAAATTGATCGTGGAGAA+GGG | 0.526796 | 2_2:-65250677 | Msa0265030:CDS |
| TCCAACATGTCAAAGAATGA+AGG | 0.529068 | 2_2:+65249810 | None:intergenic |
| GAGGCTAACAGAGTTGATCT+TGG | 0.534251 | 2_2:+65249030 | None:intergenic |
| ATTGCATGGGATATTAAATG+AGG | 0.540584 | 2_2:+65249011 | None:intergenic |
| GAGATTGAGAAGGTGAGAGT+GGG | 0.541830 | 2_2:+65251027 | None:intergenic |
| AACAGAGTTGATCTTGGCGG+TGG | 0.543674 | 2_2:+65249036 | None:intergenic |
| TTGGACAGAAGATGGAAGTA+AGG | 0.547858 | 2_2:-65247942 | Msa0265030:intron |
| GAAGAGATGGAACAGACAAA+TGG | 0.548453 | 2_2:-65249498 | Msa0265030:CDS |
| ATTGAGGGGAGGTGTGCCAC+CGG | 0.555898 | 2_2:-65250231 | Msa0265030:CDS |
| TAGTTGCATTGCAGTTGTTG+TGG | 0.558025 | 2_2:+65247756 | None:intergenic |
| ACATTACATACCTTTAAGCT+GGG | 0.565644 | 2_2:+65250513 | None:intergenic |
| AGGAGCAGCAGTGGTTATTG+GGG | 0.567461 | 2_2:-65248732 | Msa0265030:CDS |
| AACCCGGAAATGTTGAAAGT+GGG | 0.568736 | 2_2:-65247117 | Msa0265030:three_prime_UTR |
| ATTGGGTTGAGAGATTGAGA+AGG | 0.569473 | 2_2:+65251017 | None:intergenic |
| GGAATTGAAAGCGTTGAAGA+AGG | 0.573171 | 2_2:-65249759 | Msa0265030:intron |
| CATGGAAGATGGTCACTCCA+AGG | 0.576865 | 2_2:-65247807 | Msa0265030:CDS |
| TGGGTCATGTTTGAGGAGAG+TGG | 0.576884 | 2_2:+65250988 | None:intergenic |
| TTATAGGTGTAAAGATCTAT+CGG | 0.577169 | 2_2:-65249533 | Msa0265030:intron |
| AGTCGCTTGTACAAAGGATA+CGG | 0.578256 | 2_2:+65250827 | None:intergenic |
| GAAGCAAGTCGCTTGTACAA+AGG | 0.580598 | 2_2:+65250821 | None:intergenic |
| CAATCACTCAGCTTCACCAA+TGG | 0.580774 | 2_2:+65251082 | None:intergenic |
| AACATACCGAAAATGTCATG+TGG | 0.589905 | 2_2:-65247157 | Msa0265030:three_prime_UTR |
| AAGATGGTCACTCCAAGGGA+TGG | 0.596443 | 2_2:-65247802 | Msa0265030:CDS |
| GCTAACAGAGTTGATCTTGG+CGG | 0.598508 | 2_2:+65249033 | None:intergenic |
| ATACACACTGTCGCGCCACA+TGG | 0.600988 | 2_2:-65248007 | Msa0265030:CDS |
| TGCCCGAGCTCCATCAGTCA+AGG | 0.602226 | 2_2:+65248773 | None:intergenic |
| ACATACCGAAAATGTCATGT+GGG | 0.602819 | 2_2:-65247156 | Msa0265030:three_prime_UTR |
| CATGCCTGTAGGAGCAGCAG+TGG | 0.609941 | 2_2:-65248741 | Msa0265030:CDS |
| ACCATGTGAGTGTGAAGAAG+AGG | 0.611318 | 2_2:+65250964 | None:intergenic |
| CGCTTGTACAAAGGATACGG+TGG | 0.613817 | 2_2:+65250830 | None:intergenic |
| AAGAAGTGTATGGTTGAACC+GGG | 0.618261 | 2_2:+65249448 | None:intergenic |
| ATGGAAGATGGTCACTCCAA+GGG | 0.619050 | 2_2:-65247806 | Msa0265030:CDS |
| CATTGGCCAAGCATGCCTGT+AGG | 0.630043 | 2_2:-65248752 | Msa0265030:CDS |
| AAACCTGGTGTATTTGCCGG+TGG | 0.634489 | 2_2:+65250215 | None:intergenic |
| TGTGAGTGTGAAGAAGAGGA+TGG | 0.646604 | 2_2:+65250968 | None:intergenic |
| GTGCCACCGGCAAATACACC+AGG | 0.647458 | 2_2:-65250218 | Msa0265030:intron |
| ATGTTGGAGACAGAAAGTCT+TGG | 0.647936 | 2_2:-65249795 | Msa0265030:CDS |
| TCCTCTTCTTCACACTCACA+TGG | 0.649322 | 2_2:-65250965 | Msa0265030:intron |
| CTCCTGAACATGGAGTTCAA+AGG | 0.653843 | 2_2:+65250546 | None:intergenic |
| TGAATGGCACAAATTGATCG+TGG | 0.661709 | 2_2:-65250684 | Msa0265030:CDS |
| CATACCGAAAATGTCATGTG+GGG | 0.667868 | 2_2:-65247155 | Msa0265030:three_prime_UTR |
| TCGGTCTAATGCATACCACT+GGG | 0.667886 | 2_2:-65249077 | Msa0265030:CDS |
| GCTTGTACAAAGGATACGGT+GGG | 0.674874 | 2_2:+65250831 | None:intergenic |
| GTGAGTGTGAAGAAGAGGAT+GGG | 0.679939 | 2_2:+65250969 | None:intergenic |
| TGCATTAGGAACTGTCCCAG+TGG | 0.699235 | 2_2:+65249062 | None:intergenic |
| TTGATGGATATGGTGCACGT+TGG | 0.702564 | 2_2:-65247961 | Msa0265030:CDS |
| ATACCGAAAATGTCATGTGG+GGG | 0.703020 | 2_2:-65247154 | Msa0265030:three_prime_UTR |
| TAGGTGTAAAGATCTATCGG+AGG | 0.707792 | 2_2:-65249530 | Msa0265030:CDS |
| ATTTCAAAGACAACTCCATG+TGG | 0.724759 | 2_2:+65247992 | None:intergenic |
| TCAGTATATAGGGAGTAAGG+CGG | 0.729351 | 2_2:-65249836 | Msa0265030:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTTCTTTTTTTAATT+TGG | - | chr2_2:65248151-65248170 | Msa0265030:intron | 10.0% |
| !!! | TTCTTTTCTTTTTTTAATTT+GGG | - | chr2_2:65248152-65248171 | Msa0265030:intron | 10.0% |
| !! | AAATAAGGATATAAATATGT+AGG | + | chr2_2:65247227-65247246 | None:intergenic | 15.0% |
| !!! | ACATATTTATATCCTTATTT+AGG | - | chr2_2:65247227-65247246 | Msa0265030:intron | 15.0% |
| !!! | CATATTTATATCCTTATTTA+GGG | - | chr2_2:65247228-65247247 | Msa0265030:intron | 15.0% |
| !! | TAAAATTAGTATATTAAACC+TGG | + | chr2_2:65247942-65247961 | None:intergenic | 15.0% |
| !!! | TTTTAGATTCTAATAAAAAC+AGG | - | chr2_2:65250058-65250077 | Msa0265030:intron | 15.0% |
| !! | ATATTGATACATATTCTTTA+AGG | - | chr2_2:65250259-65250278 | Msa0265030:intron | 15.0% |
| !!! | TTTTTTTTAAGAAAAGATCT+AGG | + | chr2_2:65250825-65250844 | None:intergenic | 15.0% |
| !! | AATTAATTAGTCCCTAAATA+AGG | + | chr2_2:65247242-65247261 | None:intergenic | 20.0% |
| !! | GAATAGATAATTATTCAACT+CGG | + | chr2_2:65247742-65247761 | None:intergenic | 20.0% |
| !! | AGAATGAAATTATAGTTAGA+AGG | + | chr2_2:65247845-65247864 | None:intergenic | 20.0% |
| !!! | ATTTTAAGATAACACCAAAT+TGG | - | chr2_2:65247962-65247981 | Msa0265030:CDS | 20.0% |
| !! | GTTTATTATGAGATATATGT+TGG | - | chr2_2:65248091-65248110 | Msa0265030:intron | 20.0% |
| !! | AAAGAAAAGAAAATCAAAAC+AGG | + | chr2_2:65248143-65248162 | None:intergenic | 20.0% |
| !! | AACTATAATTGAATAGTTGT+TGG | - | chr2_2:65248751-65248770 | Msa0265030:CDS | 20.0% |
| !! | TTGTTGGATTTAAAAATGAT+TGG | - | chr2_2:65248767-65248786 | Msa0265030:CDS | 20.0% |
| !!! | TAAGAAAATGTCTGTTTTTT+TGG | - | chr2_2:65249158-65249177 | Msa0265030:intron | 20.0% |
| !!! | AAGAAAATGTCTGTTTTTTT+GGG | - | chr2_2:65249159-65249178 | Msa0265030:intron | 20.0% |
| !! | ATACTTTATGATCAATATTC+AGG | - | chr2_2:65249337-65249356 | Msa0265030:intron | 20.0% |
| !!! | ACAATCTAAAATCTTCTATA+TGG | + | chr2_2:65249552-65249571 | None:intergenic | 20.0% |
| !! | TTAAGAATAAGTACTCAATT+AGG | - | chr2_2:65249862-65249881 | Msa0265030:intron | 20.0% |
| !! | AAAAGAACATTAAAAAACAC+AGG | + | chr2_2:65250041-65250060 | None:intergenic | 20.0% |
| !!! | AATTTGTTTTTCAGTTCATT+GGG | - | chr2_2:65250295-65250314 | Msa0265030:intron | 20.0% |
| !! | TGAGAAAAATGCATTATATT+GGG | + | chr2_2:65250741-65250760 | None:intergenic | 20.0% |
| !! | ATGAGAAAAATGCATTATAT+TGG | + | chr2_2:65250742-65250761 | None:intergenic | 20.0% |
| !!! | AATATAATGCATTTTTCTCA+TGG | - | chr2_2:65250741-65250760 | Msa0265030:CDS | 20.0% |
| !! | AAAACTTAAATTAACCTTTC+CGG | + | chr2_2:65250891-65250910 | None:intergenic | 20.0% |
| !! | AAAACTTTAACTAACAATTC+TGG | + | chr2_2:65250932-65250951 | None:intergenic | 20.0% |
| !!! | ATTGTTAGTTAAAGTTTTAC+TGG | - | chr2_2:65250934-65250953 | Msa0265030:intron | 20.0% |
| !! | TTACTGGAAATTTAACAAAT+CGG | - | chr2_2:65250950-65250969 | Msa0265030:intron | 20.0% |
| ! | GTGAAAATGGAAAACAAAAA+TGG | - | chr2_2:65247021-65247040 | Msa0265030:three_prime_UTR | 25.0% |
| ! | GAATCTGCAAATAGAATAAT+AGG | + | chr2_2:65247276-65247295 | None:intergenic | 25.0% |
| ! | TATTCTATTTGCAGATTCTT+TGG | - | chr2_2:65247278-65247297 | Msa0265030:intron | 25.0% |
| !! | TTCTGAATCATTTTGTAGTA+CGG | - | chr2_2:65247362-65247381 | Msa0265030:intron | 25.0% |
| !!! | ATGTTTCTTTTTGTTTCAAC+AGG | - | chr2_2:65247555-65247574 | Msa0265030:intron | 25.0% |
| !! | TTTATTCAGTCTCTCTTTTA+GGG | + | chr2_2:65247771-65247790 | None:intergenic | 25.0% |
| !! | ATTTATTCAGTCTCTCTTTT+AGG | + | chr2_2:65247772-65247791 | None:intergenic | 25.0% |
| ! | ACAAATGATAATAACCTCTT+TGG | - | chr2_2:65247807-65247826 | Msa0265030:CDS | 25.0% |
| ! | GATTAAGACTAAATCCAATT+TGG | + | chr2_2:65247979-65247998 | None:intergenic | 25.0% |
| ! | AAAATCCAATTAAGTCCATA+TGG | + | chr2_2:65248046-65248065 | None:intergenic | 25.0% |
| ! | ATTTCTTAATAGTTGACAGT+TGG | - | chr2_2:65248069-65248088 | Msa0265030:CDS | 25.0% |
| !!! | CTTTTTTTAATTTGGGTTCT+AGG | - | chr2_2:65248159-65248178 | Msa0265030:intron | 25.0% |
| ! | GATTCTCTTAAATAAGTCTT+TGG | - | chr2_2:65248199-65248218 | Msa0265030:intron | 25.0% |
| ! | TCTTACTTCATCAGTATATA+GGG | - | chr2_2:65248293-65248312 | Msa0265030:intron | 25.0% |
| ! | TTATCTATAAACAGGACATT+GGG | + | chr2_2:65248408-65248427 | None:intergenic | 25.0% |
| ! | CATATCACTTATCTATAAAC+AGG | + | chr2_2:65248416-65248435 | None:intergenic | 25.0% |
| ! | CTGTTTATAGATAAGTGATA+TGG | - | chr2_2:65248414-65248433 | Msa0265030:intron | 25.0% |
| ! | ATTGTATTCTTGCATTCAAA+TGG | - | chr2_2:65248496-65248515 | Msa0265030:intron | 25.0% |
| !! | TGTAAAATCTAGAATTGACT+TGG | + | chr2_2:65248556-65248575 | None:intergenic | 25.0% |
| ! | TTATAGGTGTAAAGATCTAT+CGG | - | chr2_2:65248606-65248625 | Msa0265030:intron | 25.0% |
| ! | ACACATCATAATCAACAATT+AGG | + | chr2_2:65248837-65248856 | None:intergenic | 25.0% |
| !!! | AGAAAATGTCTGTTTTTTTG+GGG | - | chr2_2:65249160-65249179 | Msa0265030:intron | 25.0% |
| !!! | TTACCTCTTTCTTTTTTTGT+TGG | - | chr2_2:65249209-65249228 | Msa0265030:intron | 25.0% |
| ! | AATCCAACAAAAAAAGAAAG+AGG | + | chr2_2:65249215-65249234 | None:intergenic | 25.0% |
| ! | GTATATTTATGAAGAACCTT+AGG | - | chr2_2:65249242-65249261 | Msa0265030:intron | 25.0% |
| !! | GAATCTTTTAGATACATCTT+CGG | - | chr2_2:65249469-65249488 | Msa0265030:CDS | 25.0% |
| ! | AAGAAAAACCAAGATAACAA+AGG | + | chr2_2:65249514-65249533 | None:intergenic | 25.0% |
| !!! | TATCTTGGTTTTTCTTCAAT+CGG | - | chr2_2:65249518-65249537 | Msa0265030:CDS | 25.0% |
| !!! | GTGCTTTTTTTCATTACATA+AGG | + | chr2_2:65249604-65249623 | None:intergenic | 25.0% |
| !! | TTCCAAATTTTGTAGAAAAC+AGG | - | chr2_2:65249742-65249761 | Msa0265030:intron | 25.0% |
| !! | ATCCTGTTTTCTACAAAATT+TGG | + | chr2_2:65249747-65249766 | None:intergenic | 25.0% |
| !! | AAATTTTGTAGAAAACAGGA+TGG | - | chr2_2:65249746-65249765 | Msa0265030:intron | 25.0% |
| ! | TTGAGTACTTATTCTTAACT+TGG | + | chr2_2:65249860-65249879 | None:intergenic | 25.0% |
| !!! | TGTCAAAGATGTTTTTAGTT+TGG | - | chr2_2:65249906-65249925 | Msa0265030:intron | 25.0% |
| !!! | GTCAAAGATGTTTTTAGTTT+GGG | - | chr2_2:65249907-65249926 | Msa0265030:intron | 25.0% |
| ! | AACTGAAAAACAAATTCGTA+GGG | + | chr2_2:65250291-65250310 | None:intergenic | 25.0% |
| !!! | GAATTTGTTTTTCAGTTCAT+TGG | - | chr2_2:65250294-65250313 | Msa0265030:intron | 25.0% |
| !! | TGAATACCATATTTTCCTTT+TGG | - | chr2_2:65250412-65250431 | Msa0265030:intron | 25.0% |
| ! | CAGATCATTTATCATTTATG+AGG | + | chr2_2:65250529-65250548 | None:intergenic | 25.0% |
| ! | TATATTGGGCAAAAAAAATG+AGG | + | chr2_2:65250727-65250746 | None:intergenic | 25.0% |
| ! | AAAGATCTAGGCAAAATTAA+AGG | + | chr2_2:65250813-65250832 | None:intergenic | 25.0% |
| GGGACTAATTAATTGATTAG+TGG | - | chr2_2:65247248-65247267 | Msa0265030:intron | 30.0% | |
| ! | TCTGAATCATTTTGTAGTAC+GGG | - | chr2_2:65247363-65247382 | Msa0265030:intron | 30.0% |
| CTGCATTTGTATCTTTGATT+AGG | - | chr2_2:65247511-65247530 | Msa0265030:intron | 30.0% | |
| ATTTGTATCTTTGATTAGGC+TGG | - | chr2_2:65247515-65247534 | Msa0265030:intron | 30.0% | |
| ACATTACATACCTTTAAGCT+GGG | + | chr2_2:65247629-65247648 | None:intergenic | 30.0% | |
| TACATTACATACCTTTAAGC+TGG | + | chr2_2:65247630-65247649 | None:intergenic | 30.0% | |
| ATCATTACTCAAATAGACTG+TGG | + | chr2_2:65247674-65247693 | None:intergenic | 30.0% | |
| CTCTTACTTCATCAGTATAT+AGG | - | chr2_2:65248292-65248311 | Msa0265030:intron | 30.0% | |
| CTTATCTATAAACAGGACAT+TGG | + | chr2_2:65248409-65248428 | None:intergenic | 30.0% | |
| AACAAATAACGATTCATAGC+AGG | + | chr2_2:65248471-65248490 | None:intergenic | 30.0% | |
| TGAATGCAAGAATACAATGT+CGG | + | chr2_2:65248494-65248513 | None:intergenic | 30.0% | |
| TAACACTTGCATGACATTAT+AGG | - | chr2_2:65248590-65248609 | Msa0265030:intron | 30.0% | |
| ATTGCATGGGATATTAAATG+AGG | + | chr2_2:65249131-65249150 | None:intergenic | 30.0% | |
| TTCTTACACTTAGATTGCAT+GGG | + | chr2_2:65249144-65249163 | None:intergenic | 30.0% | |
| TTTCTTACACTTAGATTGCA+TGG | + | chr2_2:65249145-65249164 | None:intergenic | 30.0% | |
| TATAACAGCAGTGATATTTG+TGG | - | chr2_2:65249659-65249678 | Msa0265030:intron | 30.0% | |
| TGGAATTTAATGACATCAGT+AGG | + | chr2_2:65249727-65249746 | None:intergenic | 30.0% | |
| GTGACACATTATTAGTATAC+TGG | + | chr2_2:65249964-65249983 | None:intergenic | 30.0% | |
| GTATACTAATAATGTGTCAC+CGG | - | chr2_2:65249964-65249983 | Msa0265030:intron | 30.0% | |
| TGAGATCAACTTATTAGAGA+GGG | + | chr2_2:65250000-65250019 | None:intergenic | 30.0% | |
| ATGAGATCAACTTATTAGAG+AGG | + | chr2_2:65250001-65250020 | None:intergenic | 30.0% | |
| !! | ATGGAGTTGTCTTTGAAATA+AGG | - | chr2_2:65250151-65250170 | Msa0265030:intron | 30.0% |
| !! | TGGAGTTGTCTTTGAAATAA+GGG | - | chr2_2:65250152-65250171 | Msa0265030:intron | 30.0% |
| ! | TTTGAAATAAGGGTTGTTGA+TGG | - | chr2_2:65250162-65250181 | Msa0265030:intron | 30.0% |
| GAACTGAAAAACAAATTCGT+AGG | + | chr2_2:65250292-65250311 | None:intergenic | 30.0% | |
| TACATTGTAGCTATAGATGA+TGG | - | chr2_2:65250568-65250587 | Msa0265030:intron | 30.0% | |
| !! | TAAAAGTGCACTCGATTTTA+TGG | + | chr2_2:65250636-65250655 | None:intergenic | 30.0% |
| ! | TAAAATCGAGTGCACTTTTA+TGG | - | chr2_2:65250636-65250655 | Msa0265030:intron | 30.0% |
| ! | AAAATCGAGTGCACTTTTAT+GGG | - | chr2_2:65250637-65250656 | Msa0265030:intron | 30.0% |
| ATCTAGGCAAAATTAAAGGA+AGG | + | chr2_2:65250809-65250828 | None:intergenic | 30.0% | |
| ! | GTATACCGGAAAAACATTTT+GGG | + | chr2_2:65250863-65250882 | None:intergenic | 30.0% |
| ! | TAAATTAACCTTTCCGGTTT+TGG | + | chr2_2:65250885-65250904 | None:intergenic | 30.0% |
| AAAGTGGGAATGAAAAATGA+AGG | - | chr2_2:65251037-65251056 | Msa0265030:CDS | 30.0% | |
| CTCTTGCACTTAATCAATAT+TGG | + | chr2_2:65251114-65251133 | None:intergenic | 30.0% | |
| ! | TGGTAATGATTCTTCTCCAT+TGG | - | chr2_2:65247041-65247060 | Msa0265030:three_prime_UTR | 35.0% |
| CTATTTGCAGATTCTTTGGA+AGG | - | chr2_2:65247282-65247301 | Msa0265030:intron | 35.0% | |
| TTGTGTTTCTTCAGCATAGA+AGG | + | chr2_2:65247435-65247454 | None:intergenic | 35.0% | |
| TGCTGAAGAAACACAATGAA+TGG | - | chr2_2:65247439-65247458 | Msa0265030:intron | 35.0% | |
| TAAAAAAAGGCTCCTGAACA+TGG | + | chr2_2:65247606-65247625 | None:intergenic | 35.0% | |
| CCTTTAAGCTGGGTAAAAAA+AGG | + | chr2_2:65247619-65247638 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTACCCAGCTTAA+AGG | - | chr2_2:65247616-65247635 | Msa0265030:intron | 35.0% |
| AGATGGCCTAAAAACAATTG+AGG | - | chr2_2:65247892-65247911 | Msa0265030:intron | 35.0% | |
| GATGGCCTAAAAACAATTGA+GGG | - | chr2_2:65247893-65247912 | Msa0265030:intron | 35.0% | |
| ATGGCCTAAAAACAATTGAG+GGG | - | chr2_2:65247894-65247913 | Msa0265030:intron | 35.0% | |
| ATTAAACCTGGTGTATTTGC+CGG | + | chr2_2:65247930-65247949 | None:intergenic | 35.0% | |
| TTGCTTCCTTCAGAATATAC+CGG | - | chr2_2:65248018-65248037 | Msa0265030:CDS | 35.0% | |
| CTAGGATTGAATCAGGAAAT+CGG | - | chr2_2:65248177-65248196 | Msa0265030:intron | 35.0% | |
| TCATCAGTATATAGGGAGTA+AGG | - | chr2_2:65248300-65248319 | Msa0265030:intron | 35.0% | |
| TCCTTCATTCTTTGACATGT+TGG | - | chr2_2:65248328-65248347 | Msa0265030:intron | 35.0% | |
| TCCAACATGTCAAAGAATGA+AGG | + | chr2_2:65248332-65248351 | None:intergenic | 35.0% | |
| AGCAGGTATGTAGTTTATCT+AGG | + | chr2_2:65248454-65248473 | None:intergenic | 35.0% | |
| !! | ATCTAGAATTGACTTGGACA+TGG | + | chr2_2:65248550-65248569 | None:intergenic | 35.0% |
| ! | ATGTCATGCAAGTGTTACTA+CGG | + | chr2_2:65248587-65248606 | None:intergenic | 35.0% |
| AAACACTGTTTCAAAACTCC+CGG | - | chr2_2:65248673-65248692 | Msa0265030:intron | 35.0% | |
| ! | AAAGAAGTGTATGGTTGAAC+CGG | + | chr2_2:65248695-65248714 | None:intergenic | 35.0% |
| !! | TTTGGCTAGCTTATTATCTG+TGG | - | chr2_2:65248712-65248731 | Msa0265030:intron | 35.0% |
| !! | TTGGCTAGCTTATTATCTGT+GGG | - | chr2_2:65248713-65248732 | Msa0265030:intron | 35.0% |
| TGTGTTTAAGCATGCAGAAA+AGG | - | chr2_2:65248852-65248871 | Msa0265030:intron | 35.0% | |
| TTGTTTCATGTGACTTCGTA+TGG | - | chr2_2:65248924-65248943 | Msa0265030:intron | 35.0% | |
| !! | TGCTGTCTTGCTTTTATCTA+GGG | - | chr2_2:65249010-65249029 | Msa0265030:CDS | 35.0% |
| AAGAGGTAAAAGCGACTAAA+AGG | + | chr2_2:65249198-65249217 | None:intergenic | 35.0% | |
| CTTAGAGTCTCAATTCAATG+TGG | + | chr2_2:65249281-65249300 | None:intergenic | 35.0% | |
| ! | CAATGCTACCTTTGTTATCT+TGG | - | chr2_2:65249503-65249522 | Msa0265030:CDS | 35.0% |
| ACTTAATAGCACACTGTTGT+TGG | - | chr2_2:65250103-65250122 | Msa0265030:intron | 35.0% | |
| ATTTCAAAGACAACTCCATG+TGG | + | chr2_2:65250150-65250169 | None:intergenic | 35.0% | |
| ! | ATAAGGGTTGTTGATGGATA+TGG | - | chr2_2:65250168-65250187 | Msa0265030:intron | 35.0% |
| CACAAGCCAAAAGGAAAATA+TGG | + | chr2_2:65250421-65250440 | None:intergenic | 35.0% | |
| !!! | ATTTTCCTTTTGGCTTGTGA+TGG | - | chr2_2:65250422-65250441 | Msa0265030:intron | 35.0% |
| !! | GTAGCTATAGATGATGGAAT+CGG | - | chr2_2:65250574-65250593 | Msa0265030:intron | 35.0% |
| ! | AAATCGAGTGCACTTTTATG+GGG | - | chr2_2:65250638-65250657 | Msa0265030:intron | 35.0% |
| AAGGAAGGAGCTTTCAATAT+TGG | + | chr2_2:65250794-65250813 | None:intergenic | 35.0% | |
| !!! | CGGAAAAACATTTTGGGTTT+GGG | + | chr2_2:65250857-65250876 | None:intergenic | 35.0% |
| ! | CCAAACCCAAAATGTTTTTC+CGG | - | chr2_2:65250855-65250874 | Msa0265030:intron | 35.0% |
| ! | GGTATACCGGAAAAACATTT+TGG | + | chr2_2:65250864-65250883 | None:intergenic | 35.0% |
| ! | TTTTTCCGGTATACCAAAAC+CGG | - | chr2_2:65250869-65250888 | Msa0265030:intron | 35.0% |
| AACATACCGAAAATGTCATG+TGG | - | chr2_2:65250982-65251001 | Msa0265030:CDS | 35.0% | |
| ACATACCGAAAATGTCATGT+GGG | - | chr2_2:65250983-65251002 | Msa0265030:CDS | 35.0% | |
| ! | GGTGTTAAAGTTTTTGAACC+CGG | - | chr2_2:65251006-65251025 | Msa0265030:CDS | 35.0% |
| ATTCCCACTTTCAACATTTC+CGG | + | chr2_2:65251028-65251047 | None:intergenic | 35.0% | |
| !! | ATTGGGTTGAGAGATTGAGA+AGG | + | chr2_2:65247125-65247144 | None:intergenic | 40.0% |
| AGTCGCTTGTACAAAGGATA+CGG | + | chr2_2:65247315-65247334 | None:intergenic | 40.0% | |
| TTCAGCTCTGTTAAGGTGTA+TGG | - | chr2_2:65247338-65247357 | Msa0265030:intron | 40.0% | |
| TGAATGGCACAAATTGATCG+TGG | - | chr2_2:65247455-65247474 | Msa0265030:intron | 40.0% | |
| CACAAATTGATCGTGGAGAA+GGG | - | chr2_2:65247462-65247481 | Msa0265030:intron | 40.0% | |
| TTCCTTTGAACTCCATGTTC+AGG | - | chr2_2:65247591-65247610 | Msa0265030:intron | 40.0% | |
| ATGATGTTATTGCCTGCAGA+TGG | - | chr2_2:65247875-65247894 | Msa0265030:intron | 40.0% | |
| !!! | ATTGTTTTTAGGCCATCTGC+AGG | + | chr2_2:65247890-65247909 | None:intergenic | 40.0% |
| !! | ACCTCCCCTCAATTGTTTTT+AGG | + | chr2_2:65247901-65247920 | None:intergenic | 40.0% |
| ! | GGTATATTCTGAAGGAAGCA+AGG | + | chr2_2:65248019-65248038 | None:intergenic | 40.0% |
| CAATTAAGTCCATATGGAGC+CGG | + | chr2_2:65248040-65248059 | None:intergenic | 40.0% | |
| !! | TTGGGTTCTAGGATTGAATC+AGG | - | chr2_2:65248170-65248189 | Msa0265030:intron | 40.0% |
| !! | GTCTTTGGTGTTTGAAGTTC+AGG | - | chr2_2:65248214-65248233 | Msa0265030:intron | 40.0% |
| TCAGTATATAGGGAGTAAGG+CGG | - | chr2_2:65248303-65248322 | Msa0265030:intron | 40.0% | |
| ATGTTGGAGACAGAAAGTCT+TGG | - | chr2_2:65248344-65248363 | Msa0265030:intron | 40.0% | |
| TCTTCAACGCTTTCAATTCC+AGG | + | chr2_2:65248380-65248399 | None:intergenic | 40.0% | |
| !! | GGAATTGAAAGCGTTGAAGA+AGG | - | chr2_2:65248380-65248399 | Msa0265030:intron | 40.0% |
| TAGGTGTAAAGATCTATCGG+AGG | - | chr2_2:65248609-65248628 | Msa0265030:intron | 40.0% | |
| ! | GAGGTTTTACACAGAAGAGA+TGG | - | chr2_2:65248628-65248647 | Msa0265030:intron | 40.0% |
| GAAGAGATGGAACAGACAAA+TGG | - | chr2_2:65248641-65248660 | Msa0265030:intron | 40.0% | |
| ! | AAGAAGTGTATGGTTGAACC+GGG | + | chr2_2:65248694-65248713 | None:intergenic | 40.0% |
| GGTTCAACCATACACTTCTT+TGG | - | chr2_2:65248694-65248713 | Msa0265030:intron | 40.0% | |
| ! | AAGCTAGCCAAAGAAGTGTA+TGG | + | chr2_2:65248704-65248723 | None:intergenic | 40.0% |
| !! | GTGCTGTCTTGCTTTTATCT+AGG | - | chr2_2:65249009-65249028 | Msa0265030:CDS | 40.0% |
| TATCTAGGGATTGAGCTATG+AGG | - | chr2_2:65249024-65249043 | Msa0265030:CDS | 40.0% | |
| ATCTAGGGATTGAGCTATGA+GGG | - | chr2_2:65249025-65249044 | Msa0265030:CDS | 40.0% | |
| TGGAATGACACTAGTTCCTA+AGG | + | chr2_2:65249261-65249280 | None:intergenic | 40.0% | |
| TTGTGGCGAGATACATATTG+CGG | - | chr2_2:65249676-65249695 | Msa0265030:intron | 40.0% | |
| ATATTGCGGAGTCATTACGA+AGG | - | chr2_2:65249690-65249709 | Msa0265030:intron | 40.0% | |
| TTGGACAGAAGATGGAAGTA+AGG | - | chr2_2:65250197-65250216 | Msa0265030:intron | 40.0% | |
| !!! | TGGGTTTTTAGAGCCATACA+TGG | - | chr2_2:65250314-65250333 | Msa0265030:intron | 40.0% |
| TTAGAGCCATACATGGAAGA+TGG | - | chr2_2:65250321-65250340 | Msa0265030:intron | 40.0% | |
| TAGTTGCATTGCAGTTGTTG+TGG | + | chr2_2:65250386-65250405 | None:intergenic | 40.0% | |
| CAATTCCATCACAAGCCAAA+AGG | + | chr2_2:65250430-65250449 | None:intergenic | 40.0% | |
| CATTTATGAGGTACAAGAGC+TGG | + | chr2_2:65250517-65250536 | None:intergenic | 40.0% | |
| ! | AATCGAGTGCACTTTTATGG+GGG | - | chr2_2:65250639-65250658 | Msa0265030:intron | 40.0% |
| GGAAAGTAAGACTTAGACCA+AGG | + | chr2_2:65250706-65250725 | None:intergenic | 40.0% | |
| !!! | CCGGAAAAACATTTTGGGTT+TGG | + | chr2_2:65250858-65250877 | None:intergenic | 40.0% |
| CATACCGAAAATGTCATGTG+GGG | - | chr2_2:65250984-65251003 | Msa0265030:CDS | 40.0% | |
| ATACCGAAAATGTCATGTGG+GGG | - | chr2_2:65250985-65251004 | Msa0265030:CDS | 40.0% | |
| AACCCGGAAATGTTGAAAGT+GGG | - | chr2_2:65251022-65251041 | Msa0265030:CDS | 40.0% | |
| TTCCCACTTTCAACATTTCC+GGG | + | chr2_2:65251027-65251046 | None:intergenic | 40.0% | |
| CAATCACTCAGCTTCACCAA+TGG | + | chr2_2:65247060-65247079 | None:intergenic | 45.0% | |
| GGTGAAGCTGAGTGATTGTT+TGG | - | chr2_2:65247062-65247081 | Msa0265030:three_prime_UTR | 45.0% | |
| GAGATTGAGAAGGTGAGAGT+GGG | + | chr2_2:65247115-65247134 | None:intergenic | 45.0% | |
| AGAGATTGAGAAGGTGAGAG+TGG | + | chr2_2:65247116-65247135 | None:intergenic | 45.0% | |
| AAGAGGATGGGTCATGTTTG+AGG | + | chr2_2:65247161-65247180 | None:intergenic | 45.0% | |
| GTGAGTGTGAAGAAGAGGAT+GGG | + | chr2_2:65247173-65247192 | None:intergenic | 45.0% | |
| TGTGAGTGTGAAGAAGAGGA+TGG | + | chr2_2:65247174-65247193 | None:intergenic | 45.0% | |
| TCCTCTTCTTCACACTCACA+TGG | - | chr2_2:65247174-65247193 | Msa0265030:intron | 45.0% | |
| ACCATGTGAGTGTGAAGAAG+AGG | + | chr2_2:65247178-65247197 | None:intergenic | 45.0% | |
| GCTTGTACAAAGGATACGGT+GGG | + | chr2_2:65247311-65247330 | None:intergenic | 45.0% | |
| GAAGCAAGTCGCTTGTACAA+AGG | + | chr2_2:65247321-65247340 | None:intergenic | 45.0% | |
| ! | GACTTGCTTCAGCTCTGTTA+AGG | - | chr2_2:65247331-65247350 | Msa0265030:intron | 45.0% |
| GCACAAATTGATCGTGGAGA+AGG | - | chr2_2:65247461-65247480 | Msa0265030:intron | 45.0% | |
| CTCCTGAACATGGAGTTCAA+AGG | + | chr2_2:65247596-65247615 | None:intergenic | 45.0% | |
| GACTGTGGAGTGATGAATAC+TGG | + | chr2_2:65247659-65247678 | None:intergenic | 45.0% | |
| GCCTAAAAACAATTGAGGGG+AGG | - | chr2_2:65247897-65247916 | Msa0265030:intron | 45.0% | |
| ATGGAGCCGGTATATTCTGA+AGG | + | chr2_2:65248027-65248046 | None:intergenic | 45.0% | |
| !! | CAGAATATACCGGCTCCATA+TGG | - | chr2_2:65248028-65248047 | Msa0265030:CDS | 45.0% |
| CGGCTCCATATGGACTTAAT+TGG | - | chr2_2:65248038-65248057 | Msa0265030:CDS | 45.0% | |
| AGTCTTGGAGAAGTTCTTCC+TGG | - | chr2_2:65248359-65248378 | Msa0265030:intron | 45.0% | |
| ! | CTTGGACATGGACTGAATGA+CGG | + | chr2_2:65248538-65248557 | None:intergenic | 45.0% |
| ! | TCATGCAAGTGTTACTACGG+AGG | + | chr2_2:65248584-65248603 | None:intergenic | 45.0% |
| !! | TTGAGCTATGAGGGTGTTCA+AGG | - | chr2_2:65249034-65249053 | Msa0265030:CDS | 45.0% |
| TCGGTCTAATGCATACCACT+GGG | - | chr2_2:65249062-65249081 | Msa0265030:CDS | 45.0% | |
| ! | GCTAACAGAGTTGATCTTGG+CGG | + | chr2_2:65249109-65249128 | None:intergenic | 45.0% |
| ! | GAGGCTAACAGAGTTGATCT+TGG | + | chr2_2:65249112-65249131 | None:intergenic | 45.0% |
| CAGGAAAATGCCTTGACTGA+TGG | - | chr2_2:65249356-65249375 | Msa0265030:intron | 45.0% | |
| TAGGAGCAGCAGTGGTTATT+GGG | - | chr2_2:65249406-65249425 | Msa0265030:intron | 45.0% | |
| GGTTATTGGGGTTCTCTTGT+TGG | - | chr2_2:65249419-65249438 | Msa0265030:intron | 45.0% | |
| ! | TGGGGTTCTCTTGTTGGTAA+TGG | - | chr2_2:65249425-65249444 | Msa0265030:intron | 45.0% |
| ! | AGGATGGTAGTGATTCTAGC+TGG | - | chr2_2:65249762-65249781 | Msa0265030:CDS | 45.0% |
| ! | TTGATGGATATGGTGCACGT+TGG | - | chr2_2:65250178-65250197 | Msa0265030:intron | 45.0% |
| GAGTGACCATCTTCCATGTA+TGG | + | chr2_2:65250330-65250349 | None:intergenic | 45.0% | |
| ATGGAAGATGGTCACTCCAA+GGG | - | chr2_2:65250333-65250352 | Msa0265030:intron | 45.0% | |
| GAACTAGTGTTTCCATCCCT+TGG | + | chr2_2:65250352-65250371 | None:intergenic | 45.0% | |
| ! | ATCGAGTGCACTTTTATGGG+GGG | - | chr2_2:65250640-65250659 | Msa0265030:intron | 45.0% |
| AGACTTAGACCAAGGCATAG+CGG | + | chr2_2:65250698-65250717 | None:intergenic | 45.0% | |
| !! | CCTTTCCGGTTTTGGTATAC+CGG | + | chr2_2:65250877-65250896 | None:intergenic | 45.0% |
| ! | ACACCCCCACATGACATTTT+CGG | + | chr2_2:65250991-65251010 | None:intergenic | 45.0% |
| GAACCCGGAAATGTTGAAAG+TGG | - | chr2_2:65251021-65251040 | Msa0265030:CDS | 45.0% | |
| GAGGAGAGTGGAGCAGAATT+GGG | + | chr2_2:65247142-65247161 | None:intergenic | 50.0% | |
| TGAGGAGAGTGGAGCAGAAT+TGG | + | chr2_2:65247143-65247162 | None:intergenic | 50.0% | |
| TGGGTCATGTTTGAGGAGAG+TGG | + | chr2_2:65247154-65247173 | None:intergenic | 50.0% | |
| CGCTTGTACAAAGGATACGG+TGG | + | chr2_2:65247312-65247331 | None:intergenic | 50.0% | |
| GGACAATGTCACAGCCAAAG+AGG | + | chr2_2:65247824-65247843 | None:intergenic | 50.0% | |
| AAACCTGGTGTATTTGCCGG+TGG | + | chr2_2:65247927-65247946 | None:intergenic | 50.0% | |
| !! | GAGGGTGTTCAAGGTCTTCT+CGG | - | chr2_2:65249043-65249062 | Msa0265030:CDS | 50.0% |
| CTCGGTCTAATGCATACCAC+TGG | - | chr2_2:65249061-65249080 | Msa0265030:CDS | 50.0% | |
| TGCATTAGGAACTGTCCCAG+TGG | + | chr2_2:65249080-65249099 | None:intergenic | 50.0% | |
| ! | AACAGAGTTGATCTTGGCGG+TGG | + | chr2_2:65249106-65249125 | None:intergenic | 50.0% |
| ATGCCTTGACTGATGGAGCT+CGG | - | chr2_2:65249363-65249382 | Msa0265030:intron | 50.0% | |
| ATAACCACTGCTGCTCCTAC+AGG | + | chr2_2:65249405-65249424 | None:intergenic | 50.0% | |
| GTAGGAGCAGCAGTGGTTAT+TGG | - | chr2_2:65249405-65249424 | Msa0265030:intron | 50.0% | |
| AGGAGCAGCAGTGGTTATTG+GGG | - | chr2_2:65249407-65249426 | Msa0265030:intron | 50.0% | |
| CTAATCGCATTCGTGCGCAA+TGG | - | chr2_2:65249785-65249804 | Msa0265030:CDS | 50.0% | |
| GAAGATGGAAGTAAGGTGCG+TGG | - | chr2_2:65250204-65250223 | Msa0265030:intron | 50.0% | |
| CATGGAAGATGGTCACTCCA+AGG | - | chr2_2:65250332-65250351 | Msa0265030:intron | 50.0% | |
| AAGATGGTCACTCCAAGGGA+TGG | - | chr2_2:65250337-65250356 | Msa0265030:intron | 50.0% | |
| TATGGGGGGAAACACACGTA+TGG | - | chr2_2:65250654-65250673 | Msa0265030:intron | 50.0% | |
| GGGGAAACACACGTATGGTA+TGG | - | chr2_2:65250659-65250678 | Msa0265030:intron | 50.0% | |
| !! | TATGGTATGGCTTTGACCGC+AGG | - | chr2_2:65250672-65250691 | Msa0265030:CDS | 50.0% |
| CCGGTATACCAAAACCGGAA+AGG | - | chr2_2:65250874-65250893 | Msa0265030:intron | 50.0% | |
| ! | CTTGGCGGTGGAAGTGCATT+AGG | + | chr2_2:65249094-65249113 | None:intergenic | 55.0% |
| TGCCTTGACTGATGGAGCTC+GGG | - | chr2_2:65249364-65249383 | Msa0265030:intron | 55.0% | |
| CATTGGCCAAGCATGCCTGT+AGG | - | chr2_2:65249387-65249406 | Msa0265030:intron | 55.0% | |
| TAGAGAGGGAGAGACAGTGC+CGG | + | chr2_2:65249986-65250005 | None:intergenic | 55.0% | |
| ATACACACTGTCGCGCCACA+TGG | - | chr2_2:65250132-65250151 | Msa0265030:intron | 55.0% | |
| GGTGCACGTTGGACAGAAGA+TGG | - | chr2_2:65250189-65250208 | Msa0265030:intron | 55.0% | |
| CCAGCGTCACATGTCTCGAT+CGG | - | chr2_2:65250598-65250617 | Msa0265030:intron | 55.0% | |
| ! | ATTGAGGGGAGGTGTGCCAC+CGG | - | chr2_2:65247908-65247927 | Msa0265030:intron | 60.0% |
| GTGCCACCGGCAAATACACC+AGG | - | chr2_2:65247921-65247940 | Msa0265030:intron | 60.0% | |
| TGCCCGAGCTCCATCAGTCA+AGG | + | chr2_2:65249369-65249388 | None:intergenic | 60.0% | |
| GACTGATGGAGCTCGGGCAT+TGG | - | chr2_2:65249370-65249389 | Msa0265030:intron | 60.0% | |
| GCTGCTCCTACAGGCATGCT+TGG | + | chr2_2:65249396-65249415 | None:intergenic | 60.0% | |
| CATGCCTGTAGGAGCAGCAG+TGG | - | chr2_2:65249398-65249417 | Msa0265030:intron | 60.0% | |
| CCGATCGAGACATGTGACGC+TGG | + | chr2_2:65250601-65250620 | None:intergenic | 60.0% | |
| GACCAAGGCATAGCGGCCTG+CGG | + | chr2_2:65250691-65250710 | None:intergenic | 65.0% | |
| GACCGCAGGCCGCTATGCCT+TGG | - | chr2_2:65250686-65250705 | Msa0265030:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 65247011 | 65251150 | 65247011 | ID=Msa0265030;Name=Msa0265030 |
| chr2_2 | mRNA | 65247011 | 65251150 | 65247011 | ID=Msa0265030-mRNA-1;Parent=Msa0265030;Name=Msa0265030-mRNA-1;_AED=0.26;_eAED=0.26;_QI=16|1|1|1|0.90|0.83|12|212|392 |
| chr2_2 | exon | 65247011 | 65247176 | 65247011 | ID=Msa0265030-mRNA-1:exon:20508;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65247747 | 65247852 | 65247747 | ID=Msa0265030-mRNA-1:exon:20507;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65247943 | 65248097 | 65247943 | ID=Msa0265030-mRNA-1:exon:20506;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65248715 | 65248802 | 65248715 | ID=Msa0265030-mRNA-1:exon:20505;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65249005 | 65249130 | 65249005 | ID=Msa0265030-mRNA-1:exon:20504;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65249431 | 65249549 | 65249431 | ID=Msa0265030-mRNA-1:exon:20503;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65249760 | 65249847 | 65249760 | ID=Msa0265030-mRNA-1:exon:20502;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65249926 | 65249980 | 65249926 | ID=Msa0265030-mRNA-1:exon:20501;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65250219 | 65250267 | 65250219 | ID=Msa0265030-mRNA-1:exon:20500;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65250524 | 65250584 | 65250524 | ID=Msa0265030-mRNA-1:exon:20499;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65250661 | 65250869 | 65250661 | ID=Msa0265030-mRNA-1:exon:20498;Parent=Msa0265030-mRNA-1 |
| chr2_2 | exon | 65250966 | 65251150 | 65250966 | ID=Msa0265030-mRNA-1:exon:20497;Parent=Msa0265030-mRNA-1 |
| chr2_2 | five_prime_UTR | 65251135 | 65251150 | 65251135 | ID=Msa0265030-mRNA-1:five_prime_utr;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65250966 | 65251134 | 65250966 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65250661 | 65250869 | 65250661 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65250524 | 65250584 | 65250524 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65250219 | 65250267 | 65250219 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65249926 | 65249980 | 65249926 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65249760 | 65249847 | 65249760 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65249431 | 65249549 | 65249431 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65249005 | 65249130 | 65249005 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65248715 | 65248802 | 65248715 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65247943 | 65248097 | 65247943 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | CDS | 65247793 | 65247852 | 65247793 | ID=Msa0265030-mRNA-1:cds;Parent=Msa0265030-mRNA-1 |
| chr2_2 | three_prime_UTR | 65247747 | 65247792 | 65247747 | ID=Msa0265030-mRNA-1:three_prime_utr;Parent=Msa0265030-mRNA-1 |
| chr2_2 | three_prime_UTR | 65247011 | 65247176 | 65247011 | ID=Msa0265030-mRNA-1:three_prime_utr;Parent=Msa0265030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
