Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223850 | XP_013465456.1 | 89.286 | 392 | 37 | 3 | 1 | 392 | 1 | 387 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223850 | A0A072VD16 | 89.286 | 392 | 37 | 3 | 1 | 392 | 1 | 387 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0083550 | Msa0223850 | 0.806609 | 7.568865e-50 | -8.615850e-47 |
| Msa0223850 | Msa0265030 | 0.882127 | 1.351103e-70 | -8.615850e-47 |
| Msa0223850 | Msa0625440 | 0.808427 | 3.114582e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223850 | MtrunA17_Chr2g0329601 | 89.286 | 392 | 37 | 3 | 1 | 392 | 1 | 387 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223850 | AT2G43465.1 | 51.015 | 394 | 174 | 6 | 12 | 392 | 1 | 388 | 7.43e-135 | 391 |
| Msa0223850 | AT2G43465.4 | 46.440 | 323 | 154 | 6 | 12 | 321 | 1 | 317 | 2.70e-88 | 270 |
| Msa0223850 | AT2G43465.6 | 46.181 | 288 | 138 | 5 | 12 | 288 | 1 | 282 | 3.65e-78 | 243 |
| Msa0223850 | AT2G43465.2 | 46.181 | 288 | 138 | 5 | 12 | 288 | 1 | 282 | 9.57e-78 | 243 |
| Msa0223850 | AT3G03320.1 | 45.490 | 255 | 102 | 4 | 13 | 261 | 12 | 235 | 2.00e-62 | 201 |
| Msa0223850 | AT2G43465.3 | 42.593 | 216 | 107 | 5 | 12 | 216 | 1 | 210 | 1.14e-46 | 160 |
| Msa0223850 | AT2G43465.5 | 42.593 | 216 | 107 | 5 | 12 | 216 | 1 | 210 | 1.14e-46 | 160 |
Find 123 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAGTTGTCTTTGAAATA+AGG | 0.212708 | 2_1:-73541475 | Msa0223850:CDS |
| GTCTTTGGTGTTTGAAGTTC+AGG | 0.241070 | 2_1:-73543412 | Msa0223850:intron |
| TCTCTTGCACTTAATCAATA+TGG | 0.244056 | 2_1:+73540419 | None:intergenic |
| TATTCTATTTGCAGATTCTT+TGG | 0.246504 | 2_1:-73544347 | Msa0223850:intron |
| TGAGGAGAGTGGAGCAGAAT+TGG | 0.255098 | 2_1:+73544485 | None:intergenic |
| TAGGAGCAGCAGTGGTTATT+GGG | 0.260041 | 2_1:-73542220 | Msa0223850:CDS |
| TTTACTTTGTACCCATATAT+TGG | 0.288078 | 2_1:+73540514 | None:intergenic |
| CGCTGATAGTTGAGTGAAAA+TGG | 0.290147 | 2_1:-73544617 | Msa0223850:exon |
| ATTCCCACTTTCAACATTTC+CGG | 0.291841 | 2_1:+73540600 | None:intergenic |
| GGTTCAACCATACACTTCTT+TGG | 0.294268 | 2_1:-73542932 | Msa0223850:CDS |
| GATTCTCTTAAATAAGTCTT+TGG | 0.315771 | 2_1:-73543427 | Msa0223850:CDS |
| GCAGTGAAGATACCAATATA+TGG | 0.317695 | 2_1:-73540526 | Msa0223850:three_prime_UTR |
| TTCCTTTGAACTCCATGTTC+AGG | 0.335428 | 2_1:-73544034 | Msa0223850:CDS |
| GGTTATTGGGGTTCTCTTGT+TGG | 0.337664 | 2_1:-73542207 | Msa0223850:CDS |
| TTCAGCTCTGTTAAGGTGTA+TGG | 0.338958 | 2_1:-73544287 | Msa0223850:CDS |
| TCTTCAACGCTTTCAATTCC+AGG | 0.346374 | 2_1:+73543249 | None:intergenic |
| ACTGAATGTCCCTCAATTAC+AGG | 0.359623 | 2_1:-73540378 | Msa0223850:three_prime_UTR |
| GTAGGAGCAGCAGTGGTTAT+TGG | 0.360077 | 2_1:-73542221 | Msa0223850:CDS |
| TTGTGTTTCTTCAGCATAGA+AGG | 0.373463 | 2_1:+73544193 | None:intergenic |
| CTTGGCGGTGGAAGTGCATT+AGG | 0.373793 | 2_1:+73542535 | None:intergenic |
| TGGAGTTGTCTTTGAAATAA+GGG | 0.373802 | 2_1:-73541474 | Msa0223850:CDS |
| TTCCCACTTTCAACATTTCC+GGG | 0.375567 | 2_1:+73540601 | None:intergenic |
| ACTTAATAGCACACTGTTGT+TGG | 0.375610 | 2_1:-73541523 | Msa0223850:CDS |
| GAGGAGAGTGGAGCAGAATT+GGG | 0.376171 | 2_1:+73544486 | None:intergenic |
| TTGGGTTCTAGGATTGAATC+AGG | 0.378451 | 2_1:-73543456 | Msa0223850:intron |
| GCTGCTCCTACAGGCATGCT+TGG | 0.385415 | 2_1:+73542233 | None:intergenic |
| TGGGGTTCTCTTGTTGGTAA+TGG | 0.386553 | 2_1:-73542201 | Msa0223850:intron |
| AGTCTTGGAGAAGTTCTTCC+TGG | 0.389906 | 2_1:-73543267 | Msa0223850:CDS |
| AGTATACCTGGTGTATTTGC+CGG | 0.392752 | 2_1:+73543694 | None:intergenic |
| GACTGATGGAGCTCGGGCAT+TGG | 0.395909 | 2_1:-73542256 | Msa0223850:CDS |
| ATAAGGGTTGTTGATGGATA+TGG | 0.404606 | 2_1:-73541458 | Msa0223850:CDS |
| AAGAGGATGGGTCATGTTTG+AGG | 0.415272 | 2_1:+73544467 | None:intergenic |
| GAGGGTGTTCAAGGTCTTCT+CGG | 0.416598 | 2_1:-73542583 | Msa0223850:CDS |
| AAAGAAGTGTATGGTTGAAC+CGG | 0.417782 | 2_1:+73542934 | None:intergenic |
| TACATTACATACCTTTAAGC+TGG | 0.423037 | 2_1:+73543998 | None:intergenic |
| GAACTAGTGTTTCCATCCCT+TGG | 0.423110 | 2_1:+73541277 | None:intergenic |
| GACTTGCTTCAGCTCTGTTA+AGG | 0.427192 | 2_1:-73544294 | Msa0223850:CDS |
| AAATGATGCTCACAAAGAAA+TGG | 0.428479 | 2_1:+73540482 | None:intergenic |
| GAGTGACCATCTTGCATGTA+TGG | 0.434744 | 2_1:+73541299 | None:intergenic |
| TCCTTCATTCTTTGACATGT+TGG | 0.437548 | 2_1:-73543298 | Msa0223850:CDS |
| TTTGAAATAAGGGTTGTTGA+TGG | 0.441020 | 2_1:-73541464 | Msa0223850:CDS |
| GGTGAAGCTGAGTGATTGTT+TGG | 0.450238 | 2_1:-73544563 | Msa0223850:CDS |
| AGAGATTGAGAAGGTGAGAG+TGG | 0.453637 | 2_1:+73544512 | None:intergenic |
| TGCCTTGACTGATGGAGCTC+GGG | 0.460459 | 2_1:-73542262 | Msa0223850:CDS |
| CTAGGATTGAATCAGGAAAT+CGG | 0.460510 | 2_1:-73543449 | Msa0223850:intron |
| TTGAGCTATGAGGGTGTTCA+AGG | 0.466558 | 2_1:-73542592 | Msa0223850:CDS |
| TTTCTTACACTTAGATTGCA+TGG | 0.466713 | 2_1:+73542484 | None:intergenic |
| TATCTAGGGATTGAGCTATG+AGG | 0.478164 | 2_1:-73542602 | Msa0223850:intron |
| CTCGGTCTAATGCATACCAC+TGG | 0.479936 | 2_1:-73542565 | Msa0223850:CDS |
| TGCTGAAGAAACACAATGAA+TGG | 0.481240 | 2_1:-73544186 | Msa0223850:CDS |
| CAGGAAAATGCCTTGACTGA+TGG | 0.486874 | 2_1:-73542270 | Msa0223850:CDS |
| GGATAAAGTGCCTGTAATTG+AGG | 0.488892 | 2_1:+73540368 | None:intergenic |
| GGTGCACGTTGGACAGAAGA+TGG | 0.496996 | 2_1:-73541437 | Msa0223850:CDS |
| GCACAAATTGATCGTGGAGA+AGG | 0.498948 | 2_1:-73544164 | Msa0223850:CDS |
| ATAACCACTGCTGCTCCTAC+AGG | 0.499741 | 2_1:+73542224 | None:intergenic |
| CTATTTGCAGATTCTTTGGA+AGG | 0.500114 | 2_1:-73544343 | Msa0223850:intron |
| ATCTAGGGATTGAGCTATGA+GGG | 0.502610 | 2_1:-73542601 | Msa0223850:intron |
| CATGGGAGAGTGTAGAGAAA+TGG | 0.503407 | 2_1:+73540328 | None:intergenic |
| TCATCAGTATATAGGGAGTA+AGG | 0.506482 | 2_1:-73543326 | Msa0223850:intron |
| ATGCCTTGACTGATGGAGCT+CGG | 0.511754 | 2_1:-73542263 | Msa0223850:CDS |
| TTCTTACACTTAGATTGCAT+GGG | 0.515980 | 2_1:+73542485 | None:intergenic |
| CAGTGAAGATACCAATATAT+GGG | 0.518781 | 2_1:-73540525 | Msa0223850:three_prime_UTR |
| TGGTAATGATTCTTCTCCAT+TGG | 0.518946 | 2_1:-73544584 | Msa0223850:CDS |
| AAGCTAGCCAAAGAAGTGTA+TGG | 0.520889 | 2_1:+73542925 | None:intergenic |
| GAACCCGGAAATGTTGAAAG+TGG | 0.521501 | 2_1:-73540604 | Msa0223850:three_prime_UTR |
| AAACACTGTTTCAAAACTCC+CGG | 0.524831 | 2_1:-73542953 | Msa0223850:CDS |
| CACAAATTGATCGTGGAGAA+GGG | 0.526796 | 2_1:-73544163 | Msa0223850:CDS |
| TCCAACATGTCAAAGAATGA+AGG | 0.529068 | 2_1:+73543297 | None:intergenic |
| GAGGCTAACAGAGTTGATCT+TGG | 0.534251 | 2_1:+73542517 | None:intergenic |
| GATAAAGTGCCTGTAATTGA+GGG | 0.537625 | 2_1:+73540369 | None:intergenic |
| ATTGCATGGGATATTAAATG+AGG | 0.540584 | 2_1:+73542498 | None:intergenic |
| TAAAGCGGTGGAACACTGCA+TGG | 0.541472 | 2_1:+73540310 | None:intergenic |
| GAGATTGAGAAGGTGAGAGT+GGG | 0.541830 | 2_1:+73544513 | None:intergenic |
| AACAGAGTTGATCTTGGCGG+TGG | 0.543674 | 2_1:+73542523 | None:intergenic |
| TTGGACAGAAGATGGAAGTA+AGG | 0.547858 | 2_1:-73541429 | Msa0223850:intron |
| GAAGAGATGGAACAGACAAA+TGG | 0.548453 | 2_1:-73542985 | Msa0223850:CDS |
| TTAGAGCCATACATGCAAGA+TGG | 0.555449 | 2_1:-73541305 | Msa0223850:CDS |
| ATTGAGGGGAGGTGTGCCAC+CGG | 0.555898 | 2_1:-73543713 | Msa0223850:CDS |
| TAGTTGCATTGCAGTTGTTG+TGG | 0.558025 | 2_1:+73541243 | None:intergenic |
| ATGGTCAGTTTACATTTGAG+AGG | 0.561673 | 2_1:+73540347 | None:intergenic |
| ACATTACATACCTTTAAGCT+GGG | 0.565644 | 2_1:+73543999 | None:intergenic |
| AGGAGCAGCAGTGGTTATTG+GGG | 0.567461 | 2_1:-73542219 | Msa0223850:CDS |
| AACCCGGAAATGTTGAAAGT+GGG | 0.568736 | 2_1:-73540603 | Msa0223850:three_prime_UTR |
| ATTGGGTTGAGAGATTGAGA+AGG | 0.569473 | 2_1:+73544503 | None:intergenic |
| GGAATTGAAAGCGTTGAAGA+AGG | 0.573171 | 2_1:-73543246 | Msa0223850:intron |
| TGGGTCATGTTTGAGGAGAG+TGG | 0.576884 | 2_1:+73544474 | None:intergenic |
| TTATAGGTGTAAAGATCTAT+CGG | 0.577169 | 2_1:-73543020 | Msa0223850:intron |
| AGTCGCTTGTACAAAGGATA+CGG | 0.578256 | 2_1:+73544313 | None:intergenic |
| GAAGCAAGTCGCTTGTACAA+AGG | 0.580598 | 2_1:+73544307 | None:intergenic |
| CAATCACTCAGCTTCACCAA+TGG | 0.580774 | 2_1:+73544568 | None:intergenic |
| CATGCAAGATGGTCACTCCA+AGG | 0.583381 | 2_1:-73541294 | Msa0223850:CDS |
| AACATACCGAAAATGTCATG+TGG | 0.589905 | 2_1:-73540643 | Msa0223850:three_prime_UTR |
| GCTAACAGAGTTGATCTTGG+CGG | 0.598508 | 2_1:+73542520 | None:intergenic |
| ATACACACTGTCGCGCCACA+TGG | 0.600988 | 2_1:-73541494 | Msa0223850:CDS |
| TGCCCGAGCTCCATCAGTCA+AGG | 0.602226 | 2_1:+73542260 | None:intergenic |
| ACATACCGAAAATGTCATGT+GGG | 0.602819 | 2_1:-73540642 | Msa0223850:three_prime_UTR |
| AAAGCGGTGGAACACTGCAT+GGG | 0.602913 | 2_1:+73540311 | None:intergenic |
| CATGCCTGTAGGAGCAGCAG+TGG | 0.609941 | 2_1:-73542228 | Msa0223850:CDS |
| ACCATGTGAGTGTGAAGAAG+AGG | 0.611318 | 2_1:+73544450 | None:intergenic |
| CGCTTGTACAAAGGATACGG+TGG | 0.613817 | 2_1:+73544316 | None:intergenic |
| AAGAAGTGTATGGTTGAACC+GGG | 0.618261 | 2_1:+73542935 | None:intergenic |
| CATTGGCCAAGCATGCCTGT+AGG | 0.630043 | 2_1:-73542239 | Msa0223850:CDS |
| ATGCAAGATGGTCACTCCAA+GGG | 0.635028 | 2_1:-73541293 | Msa0223850:CDS |
| AAGATGGTCACTCCAAGGGA+TGG | 0.635877 | 2_1:-73541289 | Msa0223850:CDS |
| AAATCATGAAAATAAAGCGG+TGG | 0.636099 | 2_1:+73540298 | None:intergenic |
| TGTGAGTGTGAAGAAGAGGA+TGG | 0.646604 | 2_1:+73544454 | None:intergenic |
| GTGCCACCGGCAAATACACC+AGG | 0.647458 | 2_1:-73543700 | Msa0223850:intron |
| ATGTTGGAGACAGAAAGTCT+TGG | 0.647936 | 2_1:-73543282 | Msa0223850:CDS |
| TCCTCTTCTTCACACTCACA+TGG | 0.649322 | 2_1:-73544451 | Msa0223850:intron |
| TGAAAATCATGAAAATAAAG+CGG | 0.650851 | 2_1:+73540295 | None:intergenic |
| CTCCTGAACATGGAGTTCAA+AGG | 0.653843 | 2_1:+73544032 | None:intergenic |
| TGAATGGCACAAATTGATCG+TGG | 0.661709 | 2_1:-73544170 | Msa0223850:CDS |
| ATACCTGGTGTATTTGCCGG+TGG | 0.663040 | 2_1:+73543697 | None:intergenic |
| CATACCGAAAATGTCATGTG+GGG | 0.667868 | 2_1:-73540641 | Msa0223850:three_prime_UTR |
| TCGGTCTAATGCATACCACT+GGG | 0.667886 | 2_1:-73542564 | Msa0223850:CDS |
| GCTTGTACAAAGGATACGGT+GGG | 0.674874 | 2_1:+73544317 | None:intergenic |
| GTGAGTGTGAAGAAGAGGAT+GGG | 0.679939 | 2_1:+73544455 | None:intergenic |
| TGCATTAGGAACTGTCCCAG+TGG | 0.699235 | 2_1:+73542549 | None:intergenic |
| TTGATGGATATGGTGCACGT+TGG | 0.702564 | 2_1:-73541448 | Msa0223850:CDS |
| ATACCGAAAATGTCATGTGG+GGG | 0.703020 | 2_1:-73540640 | Msa0223850:three_prime_UTR |
| TAGGTGTAAAGATCTATCGG+AGG | 0.707792 | 2_1:-73543017 | Msa0223850:CDS |
| ATTTCAAAGACAACTCCATG+TGG | 0.724759 | 2_1:+73541479 | None:intergenic |
| TCAGTATATAGGGAGTAAGG+CGG | 0.729351 | 2_1:-73543323 | Msa0223850:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCTTTTCTTTTTTTAATT+TGG | - | chr2_1:73541387-73541406 | Msa0223850:intron | 10.0% |
| !!! | TTCTTTTCTTTTTTTAATTT+GGG | - | chr2_1:73541388-73541407 | Msa0223850:intron | 10.0% |
| !! | AAATAAGGATATAAATATGT+AGG | + | chr2_1:73540464-73540483 | None:intergenic | 15.0% |
| !!! | ACATATTTATATCCTTATTT+AGG | - | chr2_1:73540464-73540483 | Msa0223850:three_prime_UTR | 15.0% |
| !!! | CATATTTATATCCTTATTTA+GGG | - | chr2_1:73540465-73540484 | Msa0223850:three_prime_UTR | 15.0% |
| !! | AAAATTAAAATTAGTATACC+TGG | + | chr2_1:73541183-73541202 | None:intergenic | 15.0% |
| !!! | TTTTAGATTCTAATAAAAAC+AGG | - | chr2_1:73543294-73543313 | Msa0223850:CDS | 15.0% |
| !! | ATATTGATACATATTCTTTA+AGG | - | chr2_1:73543495-73543514 | Msa0223850:intron | 15.0% |
| !!! | TTTTTTTTAAGAAAAGATCT+AGG | + | chr2_1:73544062-73544081 | None:intergenic | 15.0% |
| !! | AATTAATTAGTCCCTAAATA+AGG | + | chr2_1:73540479-73540498 | None:intergenic | 20.0% |
| !! | GAATAGATAATTATTCAACT+CGG | + | chr2_1:73540979-73540998 | None:intergenic | 20.0% |
| !! | AGAATGAAATTATAGTTAGA+AGG | + | chr2_1:73541086-73541105 | None:intergenic | 20.0% |
| !!! | ATTTTAAGATAACACCAAAT+TGG | - | chr2_1:73541198-73541217 | Msa0223850:intron | 20.0% |
| !! | GTTTATTATGAGATATATGT+TGG | - | chr2_1:73541327-73541346 | Msa0223850:intron | 20.0% |
| !! | AAAGAAAAGAAAATCAAAAC+AGG | + | chr2_1:73541379-73541398 | None:intergenic | 20.0% |
| !! | AACTATAATTGAATAGTTGT+TGG | - | chr2_1:73541987-73542006 | Msa0223850:intron | 20.0% |
| !! | TTGTTGGATTTAAAAATGAT+TGG | - | chr2_1:73542003-73542022 | Msa0223850:intron | 20.0% |
| !! | ACATATCATAATCAACAATT+AGG | + | chr2_1:73542073-73542092 | None:intergenic | 20.0% |
| !!! | TAAGAAAATGTCTGTTTTTT+TGG | - | chr2_1:73542394-73542413 | Msa0223850:intron | 20.0% |
| !!! | AAGAAAATGTCTGTTTTTTT+GGG | - | chr2_1:73542395-73542414 | Msa0223850:intron | 20.0% |
| !! | ATACTTTATGATCAATATTC+AGG | - | chr2_1:73542573-73542592 | Msa0223850:CDS | 20.0% |
| !!! | ACAATCTAAAATCTTCTATA+TGG | + | chr2_1:73542788-73542807 | None:intergenic | 20.0% |
| !! | TTAAGAATAAGTACTCAATT+AGG | - | chr2_1:73543098-73543117 | Msa0223850:intron | 20.0% |
| !! | AAAAGAACATTAAAAAACAC+AGG | + | chr2_1:73543277-73543296 | None:intergenic | 20.0% |
| !!! | AATTTGTTTTTCAGTTCATT+GGG | - | chr2_1:73543531-73543550 | Msa0223850:intron | 20.0% |
| !!! | TTTTATATACATTGTAGCTA+TGG | - | chr2_1:73543797-73543816 | Msa0223850:intron | 20.0% |
| !! | TATATTAGGCAAAAAAAATG+AGG | + | chr2_1:73543964-73543983 | None:intergenic | 20.0% |
| !! | TGAGAAAAATGCATTATATT+AGG | + | chr2_1:73543978-73543997 | None:intergenic | 20.0% |
| !!! | AATATAATGCATTTTTCTCA+TGG | - | chr2_1:73543978-73543997 | Msa0223850:intron | 20.0% |
| !! | AAAACTTAAATTAACCTTTC+CGG | + | chr2_1:73544128-73544147 | None:intergenic | 20.0% |
| !! | AAAACTTTAACTAACAATTC+TGG | + | chr2_1:73544169-73544188 | None:intergenic | 20.0% |
| !!! | ATTGTTAGTTAAAGTTTTAC+TGG | - | chr2_1:73544171-73544190 | Msa0223850:CDS | 20.0% |
| !! | TTACTGGAAATTTAACAAAT+CGG | - | chr2_1:73544187-73544206 | Msa0223850:CDS | 20.0% |
| !! | TGAAAATCATGAAAATAAAG+CGG | + | chr2_1:73544570-73544589 | None:intergenic | 20.0% |
| ! | GTGAAAATGGAAAACAAAAA+TGG | - | chr2_1:73540258-73540277 | Msa0223850:three_prime_UTR | 25.0% |
| ! | GAATCTGCAAATAGAATAAT+AGG | + | chr2_1:73540513-73540532 | None:intergenic | 25.0% |
| ! | TATTCTATTTGCAGATTCTT+TGG | - | chr2_1:73540515-73540534 | Msa0223850:three_prime_UTR | 25.0% |
| !! | TTCTGAATCATTTTGTAGTA+CGG | - | chr2_1:73540599-73540618 | Msa0223850:three_prime_UTR | 25.0% |
| ! | ATGCATTTGTATCTTTGATT+AGG | - | chr2_1:73540748-73540767 | Msa0223850:intron | 25.0% |
| !!! | ATGTTTCTTTTTGTTTCAAC+AGG | - | chr2_1:73540792-73540811 | Msa0223850:intron | 25.0% |
| !! | TTTATTCAGTCTCTGTTTTA+GGG | + | chr2_1:73541008-73541027 | None:intergenic | 25.0% |
| !! | ATTTATTCAGTCTCTGTTTT+AGG | + | chr2_1:73541009-73541028 | None:intergenic | 25.0% |
| ! | ACAAATGATAATAACCTCTT+TGG | - | chr2_1:73541048-73541067 | Msa0223850:intron | 25.0% |
| ! | GATTAAGACTAAATCCAATT+TGG | + | chr2_1:73541215-73541234 | None:intergenic | 25.0% |
| ! | AAAATCCAATTAAGTCCATA+TGG | + | chr2_1:73541282-73541301 | None:intergenic | 25.0% |
| ! | ATTTCTTAATAGTTGACAGT+TGG | - | chr2_1:73541305-73541324 | Msa0223850:CDS | 25.0% |
| !!! | CTTTTTTTAATTTGGGTTCT+AGG | - | chr2_1:73541395-73541414 | Msa0223850:intron | 25.0% |
| ! | GATTCTCTTAAATAAGTCTT+TGG | - | chr2_1:73541435-73541454 | Msa0223850:CDS | 25.0% |
| ! | TCTTACTTCATCAGTATATA+GGG | - | chr2_1:73541529-73541548 | Msa0223850:CDS | 25.0% |
| ! | TTATCTATAAACAGGACATT+GGG | + | chr2_1:73541644-73541663 | None:intergenic | 25.0% |
| ! | CATATCACTTATCTATAAAC+AGG | + | chr2_1:73541652-73541671 | None:intergenic | 25.0% |
| ! | CTGTTTATAGATAAGTGATA+TGG | - | chr2_1:73541650-73541669 | Msa0223850:intron | 25.0% |
| ! | ATTGTATTCTTGCATTCAAA+TGG | - | chr2_1:73541732-73541751 | Msa0223850:intron | 25.0% |
| !! | TGTAAAATCTAGAATTGACT+TGG | + | chr2_1:73541792-73541811 | None:intergenic | 25.0% |
| ! | TTATAGGTGTAAAGATCTAT+CGG | - | chr2_1:73541842-73541861 | Msa0223850:intron | 25.0% |
| !!! | AGAAAATGTCTGTTTTTTTG+GGG | - | chr2_1:73542396-73542415 | Msa0223850:intron | 25.0% |
| !!! | TTACCTCTTTCTTTTTTTGT+TGG | - | chr2_1:73542445-73542464 | Msa0223850:intron | 25.0% |
| ! | AATCCAACAAAAAAAGAAAG+AGG | + | chr2_1:73542451-73542470 | None:intergenic | 25.0% |
| ! | GTATATTTATGAAGAACCTT+AGG | - | chr2_1:73542478-73542497 | Msa0223850:intron | 25.0% |
| !! | GAATCTTTTAGATACATCTT+CGG | - | chr2_1:73542705-73542724 | Msa0223850:intron | 25.0% |
| ! | AAGAAAAACCAAGATAACAA+AGG | + | chr2_1:73542750-73542769 | None:intergenic | 25.0% |
| !!! | TATCTTGGTTTTTCTTCAAT+CGG | - | chr2_1:73542754-73542773 | Msa0223850:intron | 25.0% |
| !!! | GTGCTTTTTTTCATTACATA+AGG | + | chr2_1:73542840-73542859 | None:intergenic | 25.0% |
| !! | TTCCAAATTTTGTAGAAAAC+AGG | - | chr2_1:73542978-73542997 | Msa0223850:CDS | 25.0% |
| !! | ATCCTGTTTTCTACAAAATT+TGG | + | chr2_1:73542983-73543002 | None:intergenic | 25.0% |
| !! | AAATTTTGTAGAAAACAGGA+TGG | - | chr2_1:73542982-73543001 | Msa0223850:CDS | 25.0% |
| ! | TTGAGTACTTATTCTTAACT+TGG | + | chr2_1:73543096-73543115 | None:intergenic | 25.0% |
| !!! | TGTCAAAGATGTTTTTAGTT+TGG | - | chr2_1:73543142-73543161 | Msa0223850:intron | 25.0% |
| !!! | GTCAAAGATGTTTTTAGTTT+GGG | - | chr2_1:73543143-73543162 | Msa0223850:intron | 25.0% |
| ! | AACTGAAAAACAAATTCGTA+GGG | + | chr2_1:73543527-73543546 | None:intergenic | 25.0% |
| !!! | GAATTTGTTTTTCAGTTCAT+TGG | - | chr2_1:73543530-73543549 | Msa0223850:intron | 25.0% |
| !! | TGAATACCATATTTTCCTTT+TGG | - | chr2_1:73543648-73543667 | Msa0223850:intron | 25.0% |
| ! | CAGATCATTTATCATTTATG+AGG | + | chr2_1:73543765-73543784 | None:intergenic | 25.0% |
| ! | AAAGATCTAGGCAAAATTAA+AGG | + | chr2_1:73544050-73544069 | None:intergenic | 25.0% |
| ! | TTTACTTTGTACCCATATAT+TGG | + | chr2_1:73544351-73544370 | None:intergenic | 25.0% |
| GGGACTAATTAATTGATTAG+TGG | - | chr2_1:73540485-73540504 | Msa0223850:three_prime_UTR | 30.0% | |
| ! | TCTGAATCATTTTGTAGTAC+GGG | - | chr2_1:73540600-73540619 | Msa0223850:three_prime_UTR | 30.0% |
| ATTTGTATCTTTGATTAGGC+TGG | - | chr2_1:73540752-73540771 | Msa0223850:intron | 30.0% | |
| ACATTACATACCTTTAAGCT+GGG | + | chr2_1:73540866-73540885 | None:intergenic | 30.0% | |
| TACATTACATACCTTTAAGC+TGG | + | chr2_1:73540867-73540886 | None:intergenic | 30.0% | |
| ATCATTACTCAAATAGACTG+TGG | + | chr2_1:73540911-73540930 | None:intergenic | 30.0% | |
| CTCTTACTTCATCAGTATAT+AGG | - | chr2_1:73541528-73541547 | Msa0223850:CDS | 30.0% | |
| CTTATCTATAAACAGGACAT+TGG | + | chr2_1:73541645-73541664 | None:intergenic | 30.0% | |
| AACAAATAACGATTCATAGC+AGG | + | chr2_1:73541707-73541726 | None:intergenic | 30.0% | |
| TGAATGCAAGAATACAATGT+CGG | + | chr2_1:73541730-73541749 | None:intergenic | 30.0% | |
| TAACACTTGCATGACATTAT+AGG | - | chr2_1:73541826-73541845 | Msa0223850:intron | 30.0% | |
| ATTGCATGGGATATTAAATG+AGG | + | chr2_1:73542367-73542386 | None:intergenic | 30.0% | |
| TTCTTACACTTAGATTGCAT+GGG | + | chr2_1:73542380-73542399 | None:intergenic | 30.0% | |
| TTTCTTACACTTAGATTGCA+TGG | + | chr2_1:73542381-73542400 | None:intergenic | 30.0% | |
| TATAACAGCAGTGATATTTG+TGG | - | chr2_1:73542895-73542914 | Msa0223850:intron | 30.0% | |
| TGGAATTTAATGACATCAGT+AGG | + | chr2_1:73542963-73542982 | None:intergenic | 30.0% | |
| GTGACACATTATTAGTATAC+TGG | + | chr2_1:73543200-73543219 | None:intergenic | 30.0% | |
| GTATACTAATAATGTGTCAC+CGG | - | chr2_1:73543200-73543219 | Msa0223850:intron | 30.0% | |
| TGAGATCAACTTATTAGAGA+GGG | + | chr2_1:73543236-73543255 | None:intergenic | 30.0% | |
| ATGAGATCAACTTATTAGAG+AGG | + | chr2_1:73543237-73543256 | None:intergenic | 30.0% | |
| !! | ATGGAGTTGTCTTTGAAATA+AGG | - | chr2_1:73543387-73543406 | Msa0223850:intron | 30.0% |
| !! | TGGAGTTGTCTTTGAAATAA+GGG | - | chr2_1:73543388-73543407 | Msa0223850:intron | 30.0% |
| ! | TTTGAAATAAGGGTTGTTGA+TGG | - | chr2_1:73543398-73543417 | Msa0223850:intron | 30.0% |
| GAACTGAAAAACAAATTCGT+AGG | + | chr2_1:73543528-73543547 | None:intergenic | 30.0% | |
| !! | TAAAAGTGCACTCGATTTTA+TGG | + | chr2_1:73543873-73543892 | None:intergenic | 30.0% |
| ! | TAAAATCGAGTGCACTTTTA+TGG | - | chr2_1:73543873-73543892 | Msa0223850:intron | 30.0% |
| ! | AAAATCGAGTGCACTTTTAT+GGG | - | chr2_1:73543874-73543893 | Msa0223850:intron | 30.0% |
| ATCTAGGCAAAATTAAAGGA+AGG | + | chr2_1:73544046-73544065 | None:intergenic | 30.0% | |
| ! | GTATACCGGAAAAACATTTT+GGG | + | chr2_1:73544100-73544119 | None:intergenic | 30.0% |
| ! | TAAATTAACCTTTCCGGTTT+TGG | + | chr2_1:73544122-73544141 | None:intergenic | 30.0% |
| AAAGTGGGAATGAAAAATGA+AGG | - | chr2_1:73544274-73544293 | Msa0223850:CDS | 30.0% | |
| CAGTGAAGATACCAATATAT+GGG | - | chr2_1:73544337-73544356 | Msa0223850:intron | 30.0% | |
| AAATGATGCTCACAAAGAAA+TGG | + | chr2_1:73544383-73544402 | None:intergenic | 30.0% | |
| !!! | TTGTGAGCATCATTTTGATT+TGG | - | chr2_1:73544388-73544407 | Msa0223850:intron | 30.0% |
| !!! | TGTGAGCATCATTTTGATTT+GGG | - | chr2_1:73544389-73544408 | Msa0223850:intron | 30.0% |
| TCTCTTGCACTTAATCAATA+TGG | + | chr2_1:73544446-73544465 | None:intergenic | 30.0% | |
| AAATCATGAAAATAAAGCGG+TGG | + | chr2_1:73544567-73544586 | None:intergenic | 30.0% | |
| ! | TGGTAATGATTCTTCTCCAT+TGG | - | chr2_1:73540278-73540297 | Msa0223850:three_prime_UTR | 35.0% |
| CTATTTGCAGATTCTTTGGA+AGG | - | chr2_1:73540519-73540538 | Msa0223850:three_prime_UTR | 35.0% | |
| TTGTGTTTCTTCAGCATAGA+AGG | + | chr2_1:73540672-73540691 | None:intergenic | 35.0% | |
| TGCTGAAGAAACACAATGAA+TGG | - | chr2_1:73540676-73540695 | Msa0223850:intron | 35.0% | |
| TAAAAAAAGGCTCCTGAACA+TGG | + | chr2_1:73540843-73540862 | None:intergenic | 35.0% | |
| CCTTTAAGCTGGGTAAAAAA+AGG | + | chr2_1:73540856-73540875 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTACCCAGCTTAA+AGG | - | chr2_1:73540853-73540872 | Msa0223850:intron | 35.0% |
| AGATGGCCTAAAAACAATTG+AGG | - | chr2_1:73541133-73541152 | Msa0223850:intron | 35.0% | |
| GATGGCCTAAAAACAATTGA+GGG | - | chr2_1:73541134-73541153 | Msa0223850:intron | 35.0% | |
| ATGGCCTAAAAACAATTGAG+GGG | - | chr2_1:73541135-73541154 | Msa0223850:intron | 35.0% | |
| TTGCTTCCTTCAGAATATAC+CGG | - | chr2_1:73541254-73541273 | Msa0223850:three_prime_UTR | 35.0% | |
| CTAGGATTGAATCAGGAAAT+CGG | - | chr2_1:73541413-73541432 | Msa0223850:intron | 35.0% | |
| TCATCAGTATATAGGGAGTA+AGG | - | chr2_1:73541536-73541555 | Msa0223850:CDS | 35.0% | |
| TCCTTCATTCTTTGACATGT+TGG | - | chr2_1:73541564-73541583 | Msa0223850:CDS | 35.0% | |
| TCCAACATGTCAAAGAATGA+AGG | + | chr2_1:73541568-73541587 | None:intergenic | 35.0% | |
| AGCAGGTATGTAGTTTATCT+AGG | + | chr2_1:73541690-73541709 | None:intergenic | 35.0% | |
| !! | ATCTAGAATTGACTTGGACA+TGG | + | chr2_1:73541786-73541805 | None:intergenic | 35.0% |
| ATGTCATGCAAGTGTTACAA+CGG | + | chr2_1:73541823-73541842 | None:intergenic | 35.0% | |
| AAACACTGTTTCAAAACTCC+CGG | - | chr2_1:73541909-73541928 | Msa0223850:intron | 35.0% | |
| ! | AAAGAAGTGTATGGTTGAAC+CGG | + | chr2_1:73541931-73541950 | None:intergenic | 35.0% |
| !! | TTTGGCTAGCTTATTATCTG+TGG | - | chr2_1:73541948-73541967 | Msa0223850:intron | 35.0% |
| !! | TTGGCTAGCTTATTATCTGT+GGG | - | chr2_1:73541949-73541968 | Msa0223850:intron | 35.0% |
| TGTGTTTAAGCATGCAGAAA+AGG | - | chr2_1:73542090-73542109 | Msa0223850:intron | 35.0% | |
| !! | TGCTGTCTTGCTTTTATCTA+GGG | - | chr2_1:73542246-73542265 | Msa0223850:CDS | 35.0% |
| AAGAGGTAAAAGCGACTAAA+AGG | + | chr2_1:73542434-73542453 | None:intergenic | 35.0% | |
| CTTAGAGTCTCAATTCAATG+TGG | + | chr2_1:73542517-73542536 | None:intergenic | 35.0% | |
| ! | CAATGCTACCTTTGTTATCT+TGG | - | chr2_1:73542739-73542758 | Msa0223850:intron | 35.0% |
| ACTTAATAGCACACTGTTGT+TGG | - | chr2_1:73543339-73543358 | Msa0223850:intron | 35.0% | |
| ATTTCAAAGACAACTCCATG+TGG | + | chr2_1:73543386-73543405 | None:intergenic | 35.0% | |
| ! | ATAAGGGTTGTTGATGGATA+TGG | - | chr2_1:73543404-73543423 | Msa0223850:intron | 35.0% |
| CACAAGCCAAAAGGAAAATA+TGG | + | chr2_1:73543657-73543676 | None:intergenic | 35.0% | |
| !!! | ATTTTCCTTTTGGCTTGTGA+TGG | - | chr2_1:73543658-73543677 | Msa0223850:intron | 35.0% |
| TACATTGTAGCTATGGATGA+TGG | - | chr2_1:73543804-73543823 | Msa0223850:intron | 35.0% | |
| ! | AAATCGAGTGCACTTTTATG+GGG | - | chr2_1:73543875-73543894 | Msa0223850:intron | 35.0% |
| AAGGAAGGAGCTTTCAATAT+TGG | + | chr2_1:73544031-73544050 | None:intergenic | 35.0% | |
| !!! | CGGAAAAACATTTTGGGTTT+GGG | + | chr2_1:73544094-73544113 | None:intergenic | 35.0% |
| ! | CCAAACCCAAAATGTTTTTC+CGG | - | chr2_1:73544092-73544111 | Msa0223850:intron | 35.0% |
| ! | GGTATACCGGAAAAACATTT+TGG | + | chr2_1:73544101-73544120 | None:intergenic | 35.0% |
| ! | TTTTTCCGGTATACCAAAAC+CGG | - | chr2_1:73544106-73544125 | Msa0223850:intron | 35.0% |
| AACATACCGAAAATGTCATG+TGG | - | chr2_1:73544219-73544238 | Msa0223850:CDS | 35.0% | |
| ACATACCGAAAATGTCATGT+GGG | - | chr2_1:73544220-73544239 | Msa0223850:CDS | 35.0% | |
| ! | GGTGTTAAAGTTTTTGAACC+CGG | - | chr2_1:73544243-73544262 | Msa0223850:CDS | 35.0% |
| ATTCCCACTTTCAACATTTC+CGG | + | chr2_1:73544265-73544284 | None:intergenic | 35.0% | |
| GCAGTGAAGATACCAATATA+TGG | - | chr2_1:73544336-73544355 | Msa0223850:CDS | 35.0% | |
| ! | GATAAAGTGCCTGTAATTGA+GGG | + | chr2_1:73544496-73544515 | None:intergenic | 35.0% |
| ATGGTCAGTTTACATTTGAG+AGG | + | chr2_1:73544518-73544537 | None:intergenic | 35.0% | |
| CGCTGATAGTTGAGTGAAAA+TGG | - | chr2_1:73540245-73540264 | Msa0223850:three_prime_UTR | 40.0% | |
| !! | ATTGGGTTGAGAGATTGAGA+AGG | + | chr2_1:73540362-73540381 | None:intergenic | 40.0% |
| AGTCGCTTGTACAAAGGATA+CGG | + | chr2_1:73540552-73540571 | None:intergenic | 40.0% | |
| TTCAGCTCTGTTAAGGTGTA+TGG | - | chr2_1:73540575-73540594 | Msa0223850:three_prime_UTR | 40.0% | |
| TGAATGGCACAAATTGATCG+TGG | - | chr2_1:73540692-73540711 | Msa0223850:intron | 40.0% | |
| CACAAATTGATCGTGGAGAA+GGG | - | chr2_1:73540699-73540718 | Msa0223850:intron | 40.0% | |
| TTCCTTTGAACTCCATGTTC+AGG | - | chr2_1:73540828-73540847 | Msa0223850:intron | 40.0% | |
| ATGATGTTATTGCCTGCAGA+TGG | - | chr2_1:73541116-73541135 | Msa0223850:intron | 40.0% | |
| !!! | ATTGTTTTTAGGCCATCTGC+AGG | + | chr2_1:73541131-73541150 | None:intergenic | 40.0% |
| !! | ACCTCCCCTCAATTGTTTTT+AGG | + | chr2_1:73541142-73541161 | None:intergenic | 40.0% |
| AGTATACCTGGTGTATTTGC+CGG | + | chr2_1:73541171-73541190 | None:intergenic | 40.0% | |
| ! | GGTATATTCTGAAGGAAGCA+AGG | + | chr2_1:73541255-73541274 | None:intergenic | 40.0% |
| CAATTAAGTCCATATGGAGC+CGG | + | chr2_1:73541276-73541295 | None:intergenic | 40.0% | |
| !! | TTGGGTTCTAGGATTGAATC+AGG | - | chr2_1:73541406-73541425 | Msa0223850:intron | 40.0% |
| !! | GTCTTTGGTGTTTGAAGTTC+AGG | - | chr2_1:73541450-73541469 | Msa0223850:CDS | 40.0% |
| TCAGTATATAGGGAGTAAGG+CGG | - | chr2_1:73541539-73541558 | Msa0223850:CDS | 40.0% | |
| ATGTTGGAGACAGAAAGTCT+TGG | - | chr2_1:73541580-73541599 | Msa0223850:intron | 40.0% | |
| TCTTCAACGCTTTCAATTCC+AGG | + | chr2_1:73541616-73541635 | None:intergenic | 40.0% | |
| !! | GGAATTGAAAGCGTTGAAGA+AGG | - | chr2_1:73541616-73541635 | Msa0223850:intron | 40.0% |
| TAGGTGTAAAGATCTATCGG+AGG | - | chr2_1:73541845-73541864 | Msa0223850:intron | 40.0% | |
| ! | GAGGTTTTACACAGAAGAGA+TGG | - | chr2_1:73541864-73541883 | Msa0223850:intron | 40.0% |
| GAAGAGATGGAACAGACAAA+TGG | - | chr2_1:73541877-73541896 | Msa0223850:intron | 40.0% | |
| ! | AAGAAGTGTATGGTTGAACC+GGG | + | chr2_1:73541930-73541949 | None:intergenic | 40.0% |
| GGTTCAACCATACACTTCTT+TGG | - | chr2_1:73541930-73541949 | Msa0223850:intron | 40.0% | |
| ! | AAGCTAGCCAAAGAAGTGTA+TGG | + | chr2_1:73541940-73541959 | None:intergenic | 40.0% |
| TCGTTTCATGTGACTTCGTA+TGG | - | chr2_1:73542160-73542179 | Msa0223850:intron | 40.0% | |
| !! | GTGCTGTCTTGCTTTTATCT+AGG | - | chr2_1:73542245-73542264 | Msa0223850:CDS | 40.0% |
| TATCTAGGGATTGAGCTATG+AGG | - | chr2_1:73542260-73542279 | Msa0223850:CDS | 40.0% | |
| ATCTAGGGATTGAGCTATGA+GGG | - | chr2_1:73542261-73542280 | Msa0223850:CDS | 40.0% | |
| TGGAATGACACTAGTTCCTA+AGG | + | chr2_1:73542497-73542516 | None:intergenic | 40.0% | |
| TTGTGGCGAGATACATATTG+CGG | - | chr2_1:73542912-73542931 | Msa0223850:intron | 40.0% | |
| ATATTGCGGAGTCATTACGA+AGG | - | chr2_1:73542926-73542945 | Msa0223850:CDS | 40.0% | |
| TTGGACAGAAGATGGAAGTA+AGG | - | chr2_1:73543433-73543452 | Msa0223850:CDS | 40.0% | |
| TTAGAGCCATACATGCAAGA+TGG | - | chr2_1:73543557-73543576 | Msa0223850:intron | 40.0% | |
| TAGTTGCATTGCAGTTGTTG+TGG | + | chr2_1:73543622-73543641 | None:intergenic | 40.0% | |
| CAATTCCATCACAAGCCAAA+AGG | + | chr2_1:73543666-73543685 | None:intergenic | 40.0% | |
| CATTTATGAGGTACAAGAGC+TGG | + | chr2_1:73543753-73543772 | None:intergenic | 40.0% | |
| !! | GTAGCTATGGATGATGGAAT+CGG | - | chr2_1:73543810-73543829 | Msa0223850:intron | 40.0% |
| ! | AATCGAGTGCACTTTTATGG+GGG | - | chr2_1:73543876-73543895 | Msa0223850:intron | 40.0% |
| GGAAAGTAAGACTTAGACCA+AGG | + | chr2_1:73543943-73543962 | None:intergenic | 40.0% | |
| !!! | CCGGAAAAACATTTTGGGTT+TGG | + | chr2_1:73544095-73544114 | None:intergenic | 40.0% |
| CATACCGAAAATGTCATGTG+GGG | - | chr2_1:73544221-73544240 | Msa0223850:CDS | 40.0% | |
| ATACCGAAAATGTCATGTGG+GGG | - | chr2_1:73544222-73544241 | Msa0223850:CDS | 40.0% | |
| AACCCGGAAATGTTGAAAGT+GGG | - | chr2_1:73544259-73544278 | Msa0223850:CDS | 40.0% | |
| TTCCCACTTTCAACATTTCC+GGG | + | chr2_1:73544264-73544283 | None:intergenic | 40.0% | |
| ACTGAATGTCCCTCAATTAC+AGG | - | chr2_1:73544484-73544503 | Msa0223850:CDS | 40.0% | |
| ! | GGATAAAGTGCCTGTAATTG+AGG | + | chr2_1:73544497-73544516 | None:intergenic | 40.0% |
| CAATCACTCAGCTTCACCAA+TGG | + | chr2_1:73540297-73540316 | None:intergenic | 45.0% | |
| GGTGAAGCTGAGTGATTGTT+TGG | - | chr2_1:73540299-73540318 | Msa0223850:three_prime_UTR | 45.0% | |
| GAGATTGAGAAGGTGAGAGT+GGG | + | chr2_1:73540352-73540371 | None:intergenic | 45.0% | |
| AGAGATTGAGAAGGTGAGAG+TGG | + | chr2_1:73540353-73540372 | None:intergenic | 45.0% | |
| AAGAGGATGGGTCATGTTTG+AGG | + | chr2_1:73540398-73540417 | None:intergenic | 45.0% | |
| GTGAGTGTGAAGAAGAGGAT+GGG | + | chr2_1:73540410-73540429 | None:intergenic | 45.0% | |
| TGTGAGTGTGAAGAAGAGGA+TGG | + | chr2_1:73540411-73540430 | None:intergenic | 45.0% | |
| TCCTCTTCTTCACACTCACA+TGG | - | chr2_1:73540411-73540430 | Msa0223850:three_prime_UTR | 45.0% | |
| ACCATGTGAGTGTGAAGAAG+AGG | + | chr2_1:73540415-73540434 | None:intergenic | 45.0% | |
| GCTTGTACAAAGGATACGGT+GGG | + | chr2_1:73540548-73540567 | None:intergenic | 45.0% | |
| GAAGCAAGTCGCTTGTACAA+AGG | + | chr2_1:73540558-73540577 | None:intergenic | 45.0% | |
| ! | GACTTGCTTCAGCTCTGTTA+AGG | - | chr2_1:73540568-73540587 | Msa0223850:three_prime_UTR | 45.0% |
| GCACAAATTGATCGTGGAGA+AGG | - | chr2_1:73540698-73540717 | Msa0223850:intron | 45.0% | |
| CTCCTGAACATGGAGTTCAA+AGG | + | chr2_1:73540833-73540852 | None:intergenic | 45.0% | |
| GACTGTGGAGTGATGAATAC+TGG | + | chr2_1:73540896-73540915 | None:intergenic | 45.0% | |
| GCCTAAAAACAATTGAGGGG+AGG | - | chr2_1:73541138-73541157 | Msa0223850:intron | 45.0% | |
| ATGGAGCCGGTATATTCTGA+AGG | + | chr2_1:73541263-73541282 | None:intergenic | 45.0% | |
| !! | CAGAATATACCGGCTCCATA+TGG | - | chr2_1:73541264-73541283 | Msa0223850:exon | 45.0% |
| CGGCTCCATATGGACTTAAT+TGG | - | chr2_1:73541274-73541293 | Msa0223850:exon | 45.0% | |
| AGTCTTGGAGAAGTTCTTCC+TGG | - | chr2_1:73541595-73541614 | Msa0223850:intron | 45.0% | |
| ! | CTTGGACATGGACTGAATGA+CGG | + | chr2_1:73541774-73541793 | None:intergenic | 45.0% |
| TCATGCAAGTGTTACAACGG+AGG | + | chr2_1:73541820-73541839 | None:intergenic | 45.0% | |
| !! | TTGAGCTATGAGGGTGTTCA+AGG | - | chr2_1:73542270-73542289 | Msa0223850:CDS | 45.0% |
| TCGGTCTAATGCATACCACT+GGG | - | chr2_1:73542298-73542317 | Msa0223850:intron | 45.0% | |
| ! | GCTAACAGAGTTGATCTTGG+CGG | + | chr2_1:73542345-73542364 | None:intergenic | 45.0% |
| ! | GAGGCTAACAGAGTTGATCT+TGG | + | chr2_1:73542348-73542367 | None:intergenic | 45.0% |
| CAGGAAAATGCCTTGACTGA+TGG | - | chr2_1:73542592-73542611 | Msa0223850:CDS | 45.0% | |
| TAGGAGCAGCAGTGGTTATT+GGG | - | chr2_1:73542642-73542661 | Msa0223850:intron | 45.0% | |
| GGTTATTGGGGTTCTCTTGT+TGG | - | chr2_1:73542655-73542674 | Msa0223850:intron | 45.0% | |
| ! | TGGGGTTCTCTTGTTGGTAA+TGG | - | chr2_1:73542661-73542680 | Msa0223850:intron | 45.0% |
| ! | AGGATGGTAGTGATTCTAGC+TGG | - | chr2_1:73542998-73543017 | Msa0223850:CDS | 45.0% |
| ! | TTGATGGATATGGTGCACGT+TGG | - | chr2_1:73543414-73543433 | Msa0223850:CDS | 45.0% |
| GAGTGACCATCTTGCATGTA+TGG | + | chr2_1:73543566-73543585 | None:intergenic | 45.0% | |
| ATGCAAGATGGTCACTCCAA+GGG | - | chr2_1:73543569-73543588 | Msa0223850:intron | 45.0% | |
| GAACTAGTGTTTCCATCCCT+TGG | + | chr2_1:73543588-73543607 | None:intergenic | 45.0% | |
| ! | ATCGAGTGCACTTTTATGGG+GGG | - | chr2_1:73543877-73543896 | Msa0223850:intron | 45.0% |
| AGACTTAGACCAAGGCATAG+CGG | + | chr2_1:73543935-73543954 | None:intergenic | 45.0% | |
| !! | CCTTTCCGGTTTTGGTATAC+CGG | + | chr2_1:73544114-73544133 | None:intergenic | 45.0% |
| ! | ACACCCCCACATGACATTTT+CGG | + | chr2_1:73544228-73544247 | None:intergenic | 45.0% |
| GAACCCGGAAATGTTGAAAG+TGG | - | chr2_1:73544258-73544277 | Msa0223850:CDS | 45.0% | |
| ! | CATGGGAGAGTGTAGAGAAA+TGG | + | chr2_1:73544537-73544556 | None:intergenic | 45.0% |
| GAGGAGAGTGGAGCAGAATT+GGG | + | chr2_1:73540379-73540398 | None:intergenic | 50.0% | |
| TGAGGAGAGTGGAGCAGAAT+TGG | + | chr2_1:73540380-73540399 | None:intergenic | 50.0% | |
| TGGGTCATGTTTGAGGAGAG+TGG | + | chr2_1:73540391-73540410 | None:intergenic | 50.0% | |
| CGCTTGTACAAAGGATACGG+TGG | + | chr2_1:73540549-73540568 | None:intergenic | 50.0% | |
| GGACAATGTCACAGCCAAAG+AGG | + | chr2_1:73541065-73541084 | None:intergenic | 50.0% | |
| ATACCTGGTGTATTTGCCGG+TGG | + | chr2_1:73541168-73541187 | None:intergenic | 50.0% | |
| !! | GAGGGTGTTCAAGGTCTTCT+CGG | - | chr2_1:73542279-73542298 | Msa0223850:intron | 50.0% |
| CTCGGTCTAATGCATACCAC+TGG | - | chr2_1:73542297-73542316 | Msa0223850:intron | 50.0% | |
| TGCATTAGGAACTGTCCCAG+TGG | + | chr2_1:73542316-73542335 | None:intergenic | 50.0% | |
| ! | AACAGAGTTGATCTTGGCGG+TGG | + | chr2_1:73542342-73542361 | None:intergenic | 50.0% |
| ATGCCTTGACTGATGGAGCT+CGG | - | chr2_1:73542599-73542618 | Msa0223850:intron | 50.0% | |
| ATAACCACTGCTGCTCCTAC+AGG | + | chr2_1:73542641-73542660 | None:intergenic | 50.0% | |
| GTAGGAGCAGCAGTGGTTAT+TGG | - | chr2_1:73542641-73542660 | Msa0223850:intron | 50.0% | |
| AGGAGCAGCAGTGGTTATTG+GGG | - | chr2_1:73542643-73542662 | Msa0223850:intron | 50.0% | |
| CTAATCGCATTCGTGCGCAA+TGG | - | chr2_1:73543021-73543040 | Msa0223850:intron | 50.0% | |
| GAAGATGGAAGTAAGGTGCG+TGG | - | chr2_1:73543440-73543459 | Msa0223850:CDS | 50.0% | |
| CATGCAAGATGGTCACTCCA+AGG | - | chr2_1:73543568-73543587 | Msa0223850:intron | 50.0% | |
| AAGATGGTCACTCCAAGGGA+TGG | - | chr2_1:73543573-73543592 | Msa0223850:intron | 50.0% | |
| TATGGGGGGAAACACACGTA+TGG | - | chr2_1:73543891-73543910 | Msa0223850:intron | 50.0% | |
| GGGGAAACACACGTATGGTA+TGG | - | chr2_1:73543896-73543915 | Msa0223850:intron | 50.0% | |
| !! | TATGGTATGGCTTTGACCGC+AGG | - | chr2_1:73543909-73543928 | Msa0223850:intron | 50.0% |
| CCGGTATACCAAAACCGGAA+AGG | - | chr2_1:73544111-73544130 | Msa0223850:intron | 50.0% | |
| AAAGCGGTGGAACACTGCAT+GGG | + | chr2_1:73544554-73544573 | None:intergenic | 50.0% | |
| TAAAGCGGTGGAACACTGCA+TGG | + | chr2_1:73544555-73544574 | None:intergenic | 50.0% | |
| ! | CTTGGCGGTGGAAGTGCATT+AGG | + | chr2_1:73542330-73542349 | None:intergenic | 55.0% |
| TGCCTTGACTGATGGAGCTC+GGG | - | chr2_1:73542600-73542619 | Msa0223850:intron | 55.0% | |
| CATTGGCCAAGCATGCCTGT+AGG | - | chr2_1:73542623-73542642 | Msa0223850:intron | 55.0% | |
| TAGAGAGGGAGAGACAGTGC+CGG | + | chr2_1:73543222-73543241 | None:intergenic | 55.0% | |
| ATACACACTGTCGCGCCACA+TGG | - | chr2_1:73543368-73543387 | Msa0223850:intron | 55.0% | |
| GGTGCACGTTGGACAGAAGA+TGG | - | chr2_1:73543425-73543444 | Msa0223850:CDS | 55.0% | |
| CAAGCGTCACGTGTCTCGAT+CGG | - | chr2_1:73543835-73543854 | Msa0223850:intron | 55.0% | |
| ! | ATTGAGGGGAGGTGTGCCAC+CGG | - | chr2_1:73541149-73541168 | Msa0223850:intron | 60.0% |
| GTGCCACCGGCAAATACACC+AGG | - | chr2_1:73541162-73541181 | Msa0223850:intron | 60.0% | |
| TGCCCGAGCTCCATCAGTCA+AGG | + | chr2_1:73542605-73542624 | None:intergenic | 60.0% | |
| GACTGATGGAGCTCGGGCAT+TGG | - | chr2_1:73542606-73542625 | Msa0223850:intron | 60.0% | |
| GCTGCTCCTACAGGCATGCT+TGG | + | chr2_1:73542632-73542651 | None:intergenic | 60.0% | |
| CATGCCTGTAGGAGCAGCAG+TGG | - | chr2_1:73542634-73542653 | Msa0223850:intron | 60.0% | |
| CGATCGAGACACGTGACGCT+TGG | + | chr2_1:73543837-73543856 | None:intergenic | 60.0% | |
| GACCAAGGCATAGCGGCCTG+CGG | + | chr2_1:73543928-73543947 | None:intergenic | 65.0% | |
| GACCGCAGGCCGCTATGCCT+TGG | - | chr2_1:73543923-73543942 | Msa0223850:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 73540242 | 73544642 | 73540242 | ID=Msa0223850;Name=Msa0223850 |
| chr2_1 | mRNA | 73540242 | 73544642 | 73540242 | ID=Msa0223850-mRNA-1;Parent=Msa0223850;Name=Msa0223850-mRNA-1;_AED=0.24;_eAED=0.24;_QI=22|1|1|1|0.90|0.83|12|467|392 |
| chr2_1 | exon | 73540242 | 73540662 | 73540242 | ID=Msa0223850-mRNA-1:exon:21624;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73541234 | 73541339 | 73541234 | ID=Msa0223850-mRNA-1:exon:21623;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73541430 | 73541584 | 73541430 | ID=Msa0223850-mRNA-1:exon:21622;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73542202 | 73542289 | 73542202 | ID=Msa0223850-mRNA-1:exon:21621;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73542492 | 73542617 | 73542492 | ID=Msa0223850-mRNA-1:exon:21620;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73542918 | 73543036 | 73542918 | ID=Msa0223850-mRNA-1:exon:21619;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73543247 | 73543334 | 73543247 | ID=Msa0223850-mRNA-1:exon:21618;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73543413 | 73543467 | 73543413 | ID=Msa0223850-mRNA-1:exon:21617;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73543701 | 73543749 | 73543701 | ID=Msa0223850-mRNA-1:exon:21616;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73544010 | 73544070 | 73544010 | ID=Msa0223850-mRNA-1:exon:21615;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73544147 | 73544355 | 73544147 | ID=Msa0223850-mRNA-1:exon:21614;Parent=Msa0223850-mRNA-1 |
| chr2_1 | exon | 73544452 | 73544642 | 73544452 | ID=Msa0223850-mRNA-1:exon:21613;Parent=Msa0223850-mRNA-1 |
| chr2_1 | five_prime_UTR | 73544621 | 73544642 | 73544621 | ID=Msa0223850-mRNA-1:five_prime_utr;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73544452 | 73544620 | 73544452 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73544147 | 73544355 | 73544147 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73544010 | 73544070 | 73544010 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73543701 | 73543749 | 73543701 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73543413 | 73543467 | 73543413 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73543247 | 73543334 | 73543247 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73542918 | 73543036 | 73542918 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73542492 | 73542617 | 73542492 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73542202 | 73542289 | 73542202 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73541430 | 73541584 | 73541430 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | CDS | 73541280 | 73541339 | 73541280 | ID=Msa0223850-mRNA-1:cds;Parent=Msa0223850-mRNA-1 |
| chr2_1 | three_prime_UTR | 73541234 | 73541279 | 73541234 | ID=Msa0223850-mRNA-1:three_prime_utr;Parent=Msa0223850-mRNA-1 |
| chr2_1 | three_prime_UTR | 73540242 | 73540662 | 73540242 | ID=Msa0223850-mRNA-1:three_prime_utr;Parent=Msa0223850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
