Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268060 | XP_003609606.2 | 95.020 | 743 | 11 | 2 | 1 | 741 | 1 | 719 | 0.0 | 1442 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268060 | sp|Q75LJ4|ACBP6_ORYSJ | 34.772 | 417 | 238 | 7 | 27 | 437 | 115 | 503 | 3.06e-70 | 245 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268060 | G7JJ54 | 95.020 | 743 | 11 | 2 | 1 | 741 | 1 | 719 | 0.0 | 1442 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0268060 | Msa1217360 | 0.870329 | 1.584611e-66 | -8.615850e-47 |
Msa0268060 | Msa1341250 | 0.860558 | 1.899743e-63 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268060 | MtrunA17_Chr4g0066851 | 95.020 | 743 | 11 | 2 | 1 | 741 | 1 | 719 | 0.0 | 1442 |
Msa0268060 | MtrunA17_Chr2g0286241 | 70.281 | 747 | 168 | 11 | 1 | 741 | 1 | 699 | 0.0 | 1023 |
Msa0268060 | MtrunA17_Chr7g0272641 | 33.077 | 390 | 230 | 4 | 27 | 415 | 121 | 480 | 4.78e-63 | 223 |
Msa0268060 | MtrunA17_Chr1g0197401 | 35.207 | 338 | 192 | 3 | 80 | 414 | 13 | 326 | 5.97e-62 | 216 |
Msa0268060 | MtrunA17_Chr1g0192821 | 26.471 | 272 | 169 | 5 | 82 | 353 | 65 | 305 | 1.37e-25 | 112 |
Msa0268060 | MtrunA17_Chr1g0192821 | 27.931 | 290 | 172 | 7 | 82 | 368 | 15 | 270 | 1.72e-23 | 105 |
Msa0268060 | MtrunA17_Chr1g0192821 | 33.023 | 215 | 136 | 6 | 205 | 416 | 55 | 264 | 1.80e-23 | 105 |
Msa0268060 | MtrunA17_Chr1g0192821 | 24.380 | 242 | 137 | 7 | 79 | 312 | 112 | 315 | 7.34e-17 | 84.7 |
Msa0268060 | MtrunA17_Chr1g0192821 | 32.484 | 157 | 97 | 4 | 262 | 416 | 11 | 160 | 1.06e-12 | 71.6 |
Msa0268060 | MtrunA17_Chr4g0061581 | 28.846 | 260 | 153 | 6 | 79 | 334 | 62 | 293 | 1.26e-23 | 106 |
Msa0268060 | MtrunA17_Chr4g0061581 | 24.917 | 301 | 180 | 10 | 89 | 377 | 19 | 285 | 9.65e-17 | 84.3 |
Msa0268060 | MtrunA17_Chr4g0061581 | 28.571 | 196 | 124 | 6 | 219 | 399 | 16 | 210 | 9.09e-16 | 81.3 |
Msa0268060 | MtrunA17_Chr1g0198221 | 26.032 | 315 | 171 | 12 | 88 | 376 | 13 | 291 | 9.69e-18 | 87.0 |
Msa0268060 | MtrunA17_Chr1g0198221 | 30.702 | 228 | 125 | 7 | 81 | 301 | 113 | 314 | 6.30e-12 | 68.6 |
Msa0268060 | MtrunA17_Chr2g0311721 | 27.143 | 210 | 131 | 7 | 208 | 410 | 53 | 247 | 3.55e-16 | 80.5 |
Msa0268060 | MtrunA17_Chr2g0311721 | 28.333 | 180 | 125 | 4 | 215 | 392 | 8 | 185 | 3.77e-14 | 74.3 |
Msa0268060 | MtrunA17_Chr2g0311721 | 23.684 | 266 | 154 | 8 | 82 | 334 | 60 | 289 | 8.70e-13 | 70.1 |
Msa0268060 | MtrunA17_Chr4g0074871 | 26.033 | 242 | 139 | 7 | 96 | 330 | 279 | 487 | 1.97e-15 | 80.9 |
Msa0268060 | MtrunA17_Chr4g0074871 | 25.869 | 259 | 156 | 8 | 92 | 349 | 333 | 556 | 4.49e-15 | 79.7 |
Msa0268060 | MtrunA17_Chr4g0074871 | 26.257 | 179 | 126 | 3 | 225 | 403 | 333 | 505 | 1.61e-11 | 68.2 |
Msa0268060 | MtrunA17_Chr1g0196221 | 25.701 | 214 | 122 | 8 | 139 | 330 | 7 | 205 | 4.17e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0268060 | AT5G18590.2 | 60.261 | 765 | 222 | 17 | 1 | 740 | 1 | 708 | 0.0 | 853 |
Msa0268060 | AT5G18590.1 | 60.261 | 765 | 222 | 17 | 1 | 740 | 1 | 708 | 0.0 | 853 |
Msa0268060 | AT3G05420.2 | 31.532 | 444 | 271 | 7 | 39 | 477 | 131 | 546 | 1.95e-66 | 233 |
Msa0268060 | AT3G05420.1 | 31.532 | 444 | 271 | 7 | 39 | 477 | 130 | 545 | 2.32e-66 | 232 |
Msa0268060 | AT5G27630.2 | 32.737 | 391 | 235 | 4 | 82 | 469 | 172 | 537 | 1.91e-63 | 222 |
Msa0268060 | AT5G27630.3 | 32.737 | 391 | 235 | 4 | 82 | 469 | 172 | 537 | 3.34e-63 | 224 |
Msa0268060 | AT5G27630.4 | 35.503 | 338 | 190 | 4 | 81 | 415 | 171 | 483 | 3.89e-63 | 223 |
Msa0268060 | AT5G27630.1 | 35.503 | 338 | 190 | 4 | 81 | 415 | 171 | 483 | 4.23e-63 | 223 |
Msa0268060 | AT5G04420.2 | 32.955 | 352 | 203 | 3 | 80 | 422 | 20 | 347 | 4.33e-57 | 203 |
Msa0268060 | AT5G04420.1 | 32.955 | 352 | 203 | 3 | 80 | 422 | 20 | 347 | 4.33e-57 | 203 |
Msa0268060 | AT5G04420.3 | 32.955 | 352 | 203 | 3 | 80 | 422 | 20 | 347 | 4.33e-57 | 203 |
Msa0268060 | AT1G18610.1 | 29.961 | 257 | 148 | 6 | 82 | 334 | 65 | 293 | 2.62e-26 | 114 |
Msa0268060 | AT1G18610.1 | 24.179 | 335 | 205 | 10 | 83 | 405 | 13 | 310 | 1.28e-16 | 84.3 |
Msa0268060 | AT1G18610.1 | 25.207 | 242 | 139 | 8 | 79 | 310 | 112 | 321 | 8.53e-14 | 75.5 |
Msa0268060 | AT1G18610.2 | 29.961 | 257 | 148 | 6 | 82 | 334 | 65 | 293 | 2.62e-26 | 114 |
Msa0268060 | AT1G18610.2 | 24.179 | 335 | 205 | 10 | 83 | 405 | 13 | 310 | 1.28e-16 | 84.3 |
Msa0268060 | AT1G18610.2 | 25.207 | 242 | 139 | 8 | 79 | 310 | 112 | 321 | 8.53e-14 | 75.5 |
Msa0268060 | AT1G74150.4 | 27.333 | 300 | 181 | 7 | 58 | 350 | 22 | 291 | 9.03e-24 | 106 |
Msa0268060 | AT1G74150.1 | 27.899 | 276 | 162 | 7 | 82 | 350 | 62 | 307 | 1.25e-23 | 106 |
Msa0268060 | AT1G74150.1 | 38.971 | 136 | 75 | 3 | 201 | 330 | 48 | 181 | 3.23e-17 | 86.3 |
Msa0268060 | AT1G74150.1 | 27.468 | 233 | 145 | 9 | 225 | 441 | 19 | 243 | 5.29e-16 | 82.4 |
Msa0268060 | AT1G74150.3 | 27.899 | 276 | 162 | 7 | 82 | 350 | 62 | 307 | 1.35e-23 | 106 |
Msa0268060 | AT1G74150.3 | 38.971 | 136 | 75 | 3 | 201 | 330 | 48 | 181 | 3.23e-17 | 86.3 |
Msa0268060 | AT1G74150.3 | 27.468 | 233 | 145 | 9 | 225 | 441 | 19 | 243 | 5.16e-16 | 82.4 |
Msa0268060 | AT1G74150.2 | 27.899 | 276 | 162 | 7 | 82 | 350 | 62 | 307 | 1.36e-23 | 106 |
Msa0268060 | AT1G74150.2 | 38.971 | 136 | 75 | 3 | 201 | 330 | 48 | 181 | 3.45e-17 | 86.3 |
Msa0268060 | AT1G74150.2 | 27.468 | 233 | 145 | 9 | 225 | 441 | 19 | 243 | 5.22e-16 | 82.4 |
Msa0268060 | AT4G04670.1 | 25.287 | 261 | 159 | 6 | 90 | 349 | 320 | 545 | 1.85e-17 | 87.8 |
Msa0268060 | AT4G04670.1 | 23.729 | 236 | 147 | 4 | 139 | 367 | 304 | 513 | 1.61e-11 | 68.6 |
Msa0268060 | AT4G04670.1 | 26.846 | 149 | 108 | 1 | 225 | 373 | 322 | 469 | 8.23e-11 | 66.2 |
Msa0268060 | AT3G07720.1 | 30.588 | 170 | 102 | 4 | 205 | 367 | 52 | 212 | 2.10e-17 | 84.7 |
Msa0268060 | AT3G07720.1 | 27.885 | 208 | 142 | 6 | 215 | 420 | 10 | 211 | 1.81e-13 | 72.8 |
Msa0268060 | AT2G36360.2 | 25.806 | 310 | 174 | 11 | 81 | 367 | 3 | 279 | 3.13e-17 | 85.9 |
Msa0268060 | AT2G36360.2 | 32.121 | 165 | 99 | 6 | 222 | 375 | 14 | 176 | 1.57e-14 | 77.4 |
Msa0268060 | AT2G36360.2 | 29.114 | 237 | 134 | 8 | 81 | 310 | 113 | 322 | 6.40e-12 | 69.3 |
Msa0268060 | AT2G36360.1 | 25.806 | 310 | 174 | 11 | 81 | 367 | 3 | 279 | 3.13e-17 | 85.9 |
Msa0268060 | AT2G36360.1 | 32.121 | 165 | 99 | 6 | 222 | 375 | 14 | 176 | 1.57e-14 | 77.4 |
Msa0268060 | AT2G36360.1 | 29.114 | 237 | 134 | 8 | 81 | 310 | 113 | 322 | 6.40e-12 | 69.3 |
Msa0268060 | AT2G36360.3 | 25.806 | 310 | 174 | 11 | 81 | 367 | 3 | 279 | 3.98e-17 | 85.5 |
Msa0268060 | AT2G36360.3 | 30.488 | 164 | 103 | 4 | 222 | 375 | 14 | 176 | 1.93e-14 | 77.0 |
Msa0268060 | AT2G36360.3 | 29.114 | 237 | 134 | 8 | 81 | 310 | 113 | 322 | 6.93e-12 | 68.9 |
Msa0268060 | AT2G36360.4 | 25.806 | 310 | 174 | 11 | 81 | 367 | 3 | 279 | 5.61e-17 | 85.1 |
Msa0268060 | AT2G36360.4 | 32.121 | 165 | 99 | 6 | 222 | 375 | 14 | 176 | 2.41e-14 | 77.0 |
Msa0268060 | AT2G36360.4 | 29.114 | 237 | 134 | 8 | 81 | 310 | 113 | 322 | 8.92e-12 | 68.9 |
Msa0268060 | AT2G36360.5 | 25.806 | 310 | 183 | 12 | 81 | 367 | 3 | 288 | 2.16e-16 | 83.2 |
Msa0268060 | AT1G74150.6 | 33.333 | 141 | 88 | 3 | 215 | 350 | 2 | 141 | 2.92e-15 | 79.0 |
Msa0268060 | AT1G74150.5 | 33.333 | 141 | 88 | 3 | 215 | 350 | 2 | 141 | 2.92e-15 | 79.0 |
Msa0268060 | AT3G16410.1 | 28.492 | 179 | 126 | 2 | 215 | 392 | 302 | 479 | 5.55e-13 | 72.8 |
Msa0268060 | AT3G16410.1 | 24.436 | 266 | 168 | 5 | 82 | 347 | 302 | 534 | 1.30e-11 | 68.6 |
Msa0268060 | AT1G03445.1 | 25.743 | 202 | 125 | 5 | 151 | 339 | 30 | 219 | 1.67e-12 | 71.6 |
Msa0268060 | AT3G16400.2 | 29.050 | 179 | 125 | 2 | 215 | 392 | 153 | 330 | 1.83e-12 | 70.9 |
Msa0268060 | AT3G16400.2 | 23.507 | 268 | 168 | 6 | 82 | 347 | 153 | 385 | 4.61e-11 | 66.2 |
Msa0268060 | AT3G16400.1 | 29.050 | 179 | 125 | 2 | 215 | 392 | 153 | 330 | 1.83e-12 | 70.9 |
Msa0268060 | AT3G16400.1 | 23.507 | 268 | 168 | 6 | 82 | 347 | 153 | 385 | 4.61e-11 | 66.2 |
Msa0268060 | AT1G03445.2 | 25.743 | 202 | 125 | 5 | 151 | 339 | 30 | 219 | 2.22e-12 | 71.2 |
Msa0268060 | AT2G33070.1 | 28.492 | 179 | 126 | 2 | 215 | 392 | 154 | 331 | 6.08e-12 | 68.9 |
Msa0268060 | AT2G33070.1 | 23.134 | 268 | 169 | 6 | 82 | 347 | 154 | 386 | 7.03e-11 | 65.9 |
Msa0268060 | AT2G33070.2 | 28.492 | 179 | 126 | 2 | 215 | 392 | 154 | 331 | 6.08e-12 | 68.9 |
Msa0268060 | AT2G33070.2 | 23.134 | 268 | 169 | 6 | 82 | 347 | 154 | 386 | 7.03e-11 | 65.9 |
Msa0268060 | AT5G50310.1 | 30.178 | 169 | 101 | 6 | 206 | 359 | 159 | 325 | 2.26e-11 | 67.8 |
Msa0268060 | AT5G50310.1 | 28.054 | 221 | 126 | 10 | 205 | 402 | 103 | 313 | 6.93e-11 | 66.2 |
Msa0268060 | AT2G33070.3 | 28.249 | 177 | 125 | 2 | 217 | 392 | 158 | 333 | 2.54e-11 | 67.0 |
Msa0268060 | AT5G48180.1 | 26.852 | 216 | 123 | 10 | 205 | 407 | 50 | 243 | 5.37e-11 | 65.1 |
Find 200 sgRNAs with CRISPR-Local
Find 520 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGTATTATTGTCAATTTC+TGG | 0.141958 | 2_2:-69936838 | Msa0268060:CDS |
CCTTGCATGCAGGAATCTTT+AGG | 0.146868 | 2_2:+69936363 | None:intergenic |
TAGAAATTACCTTCCGAATT+TGG | 0.154916 | 2_2:+69937231 | None:intergenic |
GATAAAGTTCTTTATATATT+TGG | 0.156026 | 2_2:-69934493 | Msa0268060:CDS |
AAGTGAATATAAATCATTTA+AGG | 0.191129 | 2_2:+69934450 | None:intergenic |
AGCTCTTATTTGATATTGTT+TGG | 0.210664 | 2_2:-69934769 | Msa0268060:CDS |
CCCGGAAGTGACAGAATTTC+AGG | 0.221004 | 2_2:-69935463 | Msa0268060:CDS |
TAGCATGCCGCTGCTGTTAT+TGG | 0.224407 | 2_2:-69936645 | Msa0268060:CDS |
ATATAAATCATTTAAGGTTT+TGG | 0.224898 | 2_2:+69934456 | None:intergenic |
CCAGGTATCTTATGGGAAAA+AGG | 0.239592 | 2_2:-69935512 | Msa0268060:intron |
ATAAGTTGTTGGCCTCTTCT+TGG | 0.244634 | 2_2:+69931007 | None:intergenic |
GCTCTTATTTGATATTGTTT+GGG | 0.245557 | 2_2:-69934768 | Msa0268060:CDS |
AAGACTACCTTGTTGCATTT+GGG | 0.272272 | 2_2:-69932414 | Msa0268060:CDS |
TATAGATGCAGGACCTTTAC+TGG | 0.281962 | 2_2:+69932234 | None:intergenic |
AAAGACTACCTTGTTGCATT+TGG | 0.288100 | 2_2:-69932415 | Msa0268060:CDS |
GTAAAGTAGCAGCCCTAATA+AGG | 0.302289 | 2_2:-69931200 | Msa0268060:CDS |
CAAACAGAGATTGCAATCTA+TGG | 0.305635 | 2_2:-69930547 | Msa0268060:CDS |
ACCTGAAATTCTGTCACTTC+CGG | 0.311291 | 2_2:+69935462 | None:intergenic |
CTTGCATGCAGGAATCTTTA+GGG | 0.318925 | 2_2:+69936364 | None:intergenic |
CGTGCAGTGAAGTAGATAAT+TGG | 0.321646 | 2_2:-69930487 | Msa0268060:exon |
TCTCGTAGACGCACCAAATT+CGG | 0.323781 | 2_2:-69937244 | Msa0268060:CDS |
GGATAATGTTTACCAAACTA+TGG | 0.327359 | 2_2:+69936339 | None:intergenic |
CCTGAAATTCTGTCACTTCC+GGG | 0.334087 | 2_2:+69935463 | None:intergenic |
GCTCAGGCGGTTCCGAGAAT+TGG | 0.334965 | 2_2:-69936858 | Msa0268060:CDS |
AATCTTTAGGGGCAGACTAC+TGG | 0.343382 | 2_2:+69936376 | None:intergenic |
ATTACATTGAGAATGGAGTT+TGG | 0.344199 | 2_2:+69937072 | None:intergenic |
CTACTTCACTGCACGTGAAA+TGG | 0.348878 | 2_2:+69930495 | None:intergenic |
CCATAAAAGCAGACAGGAAA+TGG | 0.356365 | 2_2:-69931100 | Msa0268060:CDS |
ACTGCTGCTTCGGTTCAAGC+TGG | 0.358305 | 2_2:-69937475 | Msa0268060:five_prime_UTR |
TAAGTTGTTGGCCTCTTCTT+GGG | 0.360114 | 2_2:+69931008 | None:intergenic |
TTGGGATGTCTAACAGTAAC+TGG | 0.360413 | 2_2:+69937102 | None:intergenic |
AATGGAGTTTGGAATTCGTT+TGG | 0.361762 | 2_2:+69937083 | None:intergenic |
GGTACTAAATGGTATATTAC+AGG | 0.362413 | 2_2:-69933867 | Msa0268060:CDS |
CATTATCAATTTCATGAGAA+TGG | 0.366750 | 2_2:+69936914 | None:intergenic |
CTGCACGTGAAATGGTTTCC+TGG | 0.376171 | 2_2:+69930503 | None:intergenic |
CTACTTTACTTTCATAGTAT+TGG | 0.380126 | 2_2:+69931214 | None:intergenic |
TGAAGTGAAGTGAAGATGTT+TGG | 0.385211 | 2_2:-69937271 | Msa0268060:exon |
TCTGCAGTTGAACATGGTTC+TGG | 0.388697 | 2_2:-69932115 | Msa0268060:CDS |
GTTGCTACATGGTTCAATCT+TGG | 0.394586 | 2_2:+69934526 | None:intergenic |
TCAGGTGGAAGTGTTGGAAT+TGG | 0.395673 | 2_2:-69932293 | Msa0268060:intron |
TGCATGCAAGGGCCATAGTT+TGG | 0.402210 | 2_2:-69936351 | Msa0268060:intron |
CTCTGTGTCTCTGTTTATCC+AGG | 0.404491 | 2_2:-69937728 | Msa0268060:five_prime_UTR |
GATCCTGATTTATCATTCTC+AGG | 0.407816 | 2_2:+69931258 | None:intergenic |
ATGGAGTTTGGAATTCGTTT+GGG | 0.408778 | 2_2:+69937084 | None:intergenic |
GAAGATGGGGATGCAGTTAC+CGG | 0.409349 | 2_2:-69936946 | Msa0268060:CDS |
ACTTCTTAATATGTTATTAG+TGG | 0.410388 | 2_2:+69930297 | None:intergenic |
AGCATGCCGCTGCTGTTATT+GGG | 0.410438 | 2_2:-69936644 | Msa0268060:CDS |
GTGCATCACTTTCAAATACT+TGG | 0.411735 | 2_2:+69931304 | None:intergenic |
TTTCCTGAGAATGATAAATC+AGG | 0.412257 | 2_2:-69931261 | Msa0268060:CDS |
AAGTACTGGCACTGCTGCTT+CGG | 0.412785 | 2_2:-69937485 | Msa0268060:five_prime_UTR |
GACACAGAATAAAATAATAA+TGG | 0.413226 | 2_2:+69937603 | None:intergenic |
GGCCGATGCATTGAAGGAAA+TGG | 0.413822 | 2_2:-69931067 | Msa0268060:CDS |
CTCAGGCGGTTCCGAGAATT+GGG | 0.419891 | 2_2:-69936857 | Msa0268060:CDS |
GCAATGGTCACAGTGTTGTC+AGG | 0.422481 | 2_2:-69934795 | Msa0268060:CDS |
TGGAATGTTGGAGGGTCAAC+TGG | 0.425176 | 2_2:-69931172 | Msa0268060:CDS |
TGCAGCTTCTCTGCTTGCCA+TGG | 0.428507 | 2_2:+69931143 | None:intergenic |
AGGGAGAAGGAGAAGAAGAT+GGG | 0.429455 | 2_2:-69936960 | Msa0268060:CDS |
CAGGGAGAAGGAGAAGAAGA+TGG | 0.431384 | 2_2:-69936961 | Msa0268060:CDS |
GAAGTTAATTACATTGAGAA+TGG | 0.432349 | 2_2:+69937065 | None:intergenic |
GAAGGACAAGTGTTGTTGTC+CGG | 0.435488 | 2_2:-69931345 | Msa0268060:CDS |
TGGTACTGCACTGCTGGTCC+TGG | 0.436072 | 2_2:+69937710 | None:intergenic |
GACTTATCAGGTGGAAGTGT+TGG | 0.441862 | 2_2:-69932299 | Msa0268060:intron |
AATACACTGTTACTAATTGA+AGG | 0.447013 | 2_2:+69930328 | None:intergenic |
TTCATTTCATTTCAGGGAGA+AGG | 0.448941 | 2_2:-69936973 | Msa0268060:intron |
AGCAGAGAAGCTGCAGAGAA+AGG | 0.455687 | 2_2:-69931135 | Msa0268060:CDS |
TGACAATAATACCCAATTCT+CGG | 0.457202 | 2_2:+69936846 | None:intergenic |
CGTAAACTGATGAACATTAG+TGG | 0.459962 | 2_2:-69931384 | Msa0268060:CDS |
CTCTTATTTGATATTGTTTG+GGG | 0.460011 | 2_2:-69934767 | Msa0268060:CDS |
GAGATGTATACATTGAATCT+AGG | 0.462702 | 2_2:+69936802 | None:intergenic |
TGAGCTACAAGTACTGATAT+TGG | 0.463782 | 2_2:+69936876 | None:intergenic |
AAAATTGGCCGATGCATTGA+AGG | 0.464098 | 2_2:-69931073 | Msa0268060:CDS |
AAAAGGAATGAGCACCTTGT+TGG | 0.466619 | 2_2:+69933170 | None:intergenic |
TTACGAAGGGAGACATTGCT+TGG | 0.466763 | 2_2:+69932052 | None:intergenic |
GGGTCAACTGGCAGCTTCCA+TGG | 0.467509 | 2_2:-69931160 | Msa0268060:CDS |
CCTAAAGATTCCTGCATGCA+AGG | 0.471695 | 2_2:-69936363 | Msa0268060:CDS |
TTGTTGTTGTCTTAGATTGA+AGG | 0.472704 | 2_2:-69937154 | Msa0268060:intron |
ATGAGAATGGCCACTTGAGC+CGG | 0.473523 | 2_2:+69936927 | None:intergenic |
TTGTCCACTCTGACAACGTT+CGG | 0.473655 | 2_2:-69930978 | Msa0268060:CDS |
GTTGGCGGCGAGTCTGCTAC+TGG | 0.475102 | 2_2:-69936606 | Msa0268060:CDS |
TACGAAGGGAGACATTGCTT+GGG | 0.475811 | 2_2:+69932053 | None:intergenic |
TTCCATTTCCTTCAATGCAT+CGG | 0.477323 | 2_2:+69931065 | None:intergenic |
ATCTTTAGGGGCAGACTACT+GGG | 0.480997 | 2_2:+69936377 | None:intergenic |
GATGTAGCCGTACCTGTAGT+TGG | 0.486165 | 2_2:+69930773 | None:intergenic |
AGAGTAATTAAATGTGGGGC+AGG | 0.486798 | 2_2:+69937575 | None:intergenic |
AAGGACAAGTGTTGTTGTCC+GGG | 0.487114 | 2_2:-69931344 | Msa0268060:CDS |
GGAATAGAGTAATTAAATGT+GGG | 0.488823 | 2_2:+69937570 | None:intergenic |
TTGATCTCAAGTCGTTGACT+TGG | 0.492787 | 2_2:-69934702 | Msa0268060:CDS |
TCGACACGAGGAGTTATTGC+AGG | 0.493083 | 2_2:-69930814 | Msa0268060:CDS |
AACAGAGTCAACTAAGCGTT+GGG | 0.493230 | 2_2:+69932156 | None:intergenic |
CTGCTGCTTCGGTTCAAGCT+GGG | 0.494736 | 2_2:-69937474 | Msa0268060:intron |
ATATTCACTTGACTTTGAAA+CGG | 0.495952 | 2_2:-69934437 | Msa0268060:intron |
GAATTACCAGGGTTTCAGCT+TGG | 0.497187 | 2_2:-69932458 | Msa0268060:intron |
CATCATAGAGAGTTGCTACA+TGG | 0.497357 | 2_2:+69934515 | None:intergenic |
AAAGTTCTTTATATATTTGG+AGG | 0.498508 | 2_2:-69934490 | Msa0268060:CDS |
GACAATGTTTGATAAGTTGT+TGG | 0.502003 | 2_2:+69930996 | None:intergenic |
TGGTGATGGTACTGCACTGC+TGG | 0.502276 | 2_2:+69937704 | None:intergenic |
AGATGGAAGTTCTTTACCTC+AGG | 0.503667 | 2_2:-69931975 | Msa0268060:intron |
GGAGCCAAGGTTAATATTGA+AGG | 0.505831 | 2_2:-69931363 | Msa0268060:CDS |
CTTGGTGCTTGTGCAATACA+AGG | 0.512632 | 2_2:-69932440 | Msa0268060:CDS |
AATATCAGTACTTGTAGCTC+AGG | 0.512794 | 2_2:-69936874 | Msa0268060:CDS |
TTATTGCAGGGGAAAGAGCT+AGG | 0.513791 | 2_2:-69930801 | Msa0268060:CDS |
AAGTGAGTGCTGGTCACTCA+TGG | 0.520749 | 2_2:-69935350 | Msa0268060:CDS |
TTCCATCCATCACCTAGAGC+TGG | 0.522075 | 2_2:-69933909 | Msa0268060:CDS |
GAAGTGAAGTGAAGATGTTT+GGG | 0.522947 | 2_2:-69937270 | Msa0268060:exon |
CTGGTCACTCATGGAGGCAA+AGG | 0.527028 | 2_2:-69935341 | Msa0268060:CDS |
ATCACTTACGTGTAGTGAAG+TGG | 0.527387 | 2_2:+69934676 | None:intergenic |
TTGCTTCAGAATAGAAGTAC+TGG | 0.528566 | 2_2:-69937499 | Msa0268060:five_prime_UTR |
TCTATTAACGTGAGCTGAGG+TGG | 0.529972 | 2_2:-69930233 | Msa0268060:three_prime_UTR |
CAACAGAGTCAACTAAGCGT+TGG | 0.530123 | 2_2:+69932155 | None:intergenic |
GGAGGCAAAGGGAGACATAC+CGG | 0.532282 | 2_2:-69935329 | Msa0268060:intron |
CGCGATCAAATTGCTTACGA+AGG | 0.532290 | 2_2:+69932038 | None:intergenic |
CTGAAGCAAGCAAGCAAGCA+AGG | 0.533769 | 2_2:+69937513 | None:intergenic |
TCTTGATAGGTTGCTCGCAA+TGG | 0.536277 | 2_2:-69934811 | Msa0268060:intron |
ATCGATTCGAACGTTACGTT+AGG | 0.536783 | 2_2:+69937757 | None:intergenic |
GCATGACGTGGCCTTCCTCA+AGG | 0.542257 | 2_2:-69930950 | Msa0268060:CDS |
TCTGATTAGTGTAGATAATG+AGG | 0.542929 | 2_2:-69930410 | Msa0268060:three_prime_UTR |
TAGTAGTAATTATTAGCTTG+AGG | 0.543009 | 2_2:+69937672 | None:intergenic |
ATCTGTCCATAAAAGCAGAC+AGG | 0.543682 | 2_2:-69931106 | Msa0268060:CDS |
AAACTATGGCCCTTGCATGC+AGG | 0.544560 | 2_2:+69936353 | None:intergenic |
TGCACGTGAAATGGTTTCCT+GGG | 0.544565 | 2_2:+69930504 | None:intergenic |
AGCTAGGGCATTCCAACTAC+AGG | 0.545831 | 2_2:-69930785 | Msa0268060:intron |
AAGGTTCAACAGCTTTCTGA+TGG | 0.546580 | 2_2:-69937135 | Msa0268060:CDS |
TGGAATAGAGTAATTAAATG+TGG | 0.546695 | 2_2:+69937569 | None:intergenic |
GACTACCTTGTTGCATTTGG+GGG | 0.548558 | 2_2:-69932412 | Msa0268060:CDS |
AGACGTTCAACTCCCAGTAA+AGG | 0.548803 | 2_2:-69932247 | Msa0268060:CDS |
AGACTACCTTGTTGCATTTG+GGG | 0.550546 | 2_2:-69932413 | Msa0268060:CDS |
GTAATTGGGATCTACAGATT+CGG | 0.551376 | 2_2:+69932078 | None:intergenic |
TCACCTAGAGCTGGTTGTTG+TGG | 0.552879 | 2_2:-69933900 | Msa0268060:CDS |
GGGAGAAGGAGAAGAAGATG+GGG | 0.552987 | 2_2:-69936959 | Msa0268060:CDS |
TTCTTGGGCCAACTCTAGAC+CGG | 0.555005 | 2_2:+69931023 | None:intergenic |
GATGCAGTTACCGGCTCAAG+TGG | 0.556942 | 2_2:-69936937 | Msa0268060:CDS |
TTGTCCTTCAATATTAACCT+TGG | 0.557383 | 2_2:+69931359 | None:intergenic |
CTTTGTCAAACCTGATTAGA+CGG | 0.559990 | 2_2:+69932376 | None:intergenic |
AAGATGGACAAGAACTCAGA+TGG | 0.560785 | 2_2:-69931992 | Msa0268060:CDS |
TTGTTGGTAGTGATAGAAGA+TGG | 0.561523 | 2_2:+69933186 | None:intergenic |
ACGCCACAACAACCAGCTCT+AGG | 0.562219 | 2_2:+69933897 | None:intergenic |
GGGAATAAGATCATAGTGGT+TGG | 0.563677 | 2_2:-69936624 | Msa0268060:CDS |
GAAGCTAGCCGGTCTAGAGT+TGG | 0.567033 | 2_2:-69931031 | Msa0268060:CDS |
TGGTCAAGAGTAAAGGTTCG+AGG | 0.567595 | 2_2:-69933933 | Msa0268060:CDS |
GATGGCATGGTCAAGAGTAA+AGG | 0.568782 | 2_2:-69933940 | Msa0268060:CDS |
AACCAGCTCTAGGTGATGGA+TGG | 0.570411 | 2_2:+69933907 | None:intergenic |
GAAGGGAGACATTGCTTGGG+GGG | 0.571244 | 2_2:+69932056 | None:intergenic |
TATACATTGAATCTAGGAGC+GGG | 0.571927 | 2_2:+69936808 | None:intergenic |
TCTAGAGTTGGCCCAAGAAG+AGG | 0.572395 | 2_2:-69931019 | Msa0268060:CDS |
ATTGGAGGGAAAACAGATCC+CGG | 0.572579 | 2_2:-69935481 | Msa0268060:CDS |
GAAGGATAGATAGAACTAAG+AGG | 0.573056 | 2_2:+69930346 | None:intergenic |
CTAAAGATTCCTGCATGCAA+GGG | 0.575942 | 2_2:-69936362 | Msa0268060:CDS |
TGGATTGTTAGATGATGTGC+AGG | 0.577622 | 2_2:-69936586 | Msa0268060:intron |
CAACAACCAGCTCTAGGTGA+TGG | 0.583967 | 2_2:+69933903 | None:intergenic |
ATCTAAAACAGCCTTGAGGA+AGG | 0.584324 | 2_2:+69930939 | None:intergenic |
CGACACGAGGAGTTATTGCA+GGG | 0.588443 | 2_2:-69930813 | Msa0268060:CDS |
TGGTCACTCATGGAGGCAAA+GGG | 0.590172 | 2_2:-69935340 | Msa0268060:CDS |
TTGATACAGAAAGTGAGTGC+TGG | 0.592237 | 2_2:-69935360 | Msa0268060:CDS |
CAATGGTCACAGTGTTGTCA+GGG | 0.593372 | 2_2:-69934794 | Msa0268060:CDS |
ACATGGTTCAATCTTGGAGA+AGG | 0.593948 | 2_2:+69934532 | None:intergenic |
TTAGCATCTGCAGTTGAACA+TGG | 0.594598 | 2_2:-69932121 | Msa0268060:CDS |
TATTGGGAATAAGATCATAG+TGG | 0.595128 | 2_2:-69936628 | Msa0268060:CDS |
GTACTAAATGGTATATTACA+GGG | 0.598606 | 2_2:-69933866 | Msa0268060:CDS |
GATGAACATTAGTGGAGCCA+AGG | 0.598955 | 2_2:-69931376 | Msa0268060:CDS |
ATTCGAACGTTACGTTAGGT+AGG | 0.605733 | 2_2:+69937761 | None:intergenic |
TTACTGCGAGAGAAGCTAGC+CGG | 0.609620 | 2_2:-69931042 | Msa0268060:CDS |
AATAAGATCATAGTGGTTGG+CGG | 0.609881 | 2_2:-69936621 | Msa0268060:CDS |
TTGCATGCAGGAATCTTTAG+GGG | 0.610352 | 2_2:+69936365 | None:intergenic |
ATACAATGCAGATGTCAAGA+TGG | 0.612562 | 2_2:-69932008 | Msa0268060:CDS |
ATCAGTACTTGTAGCTCAGG+CGG | 0.612630 | 2_2:-69936871 | Msa0268060:CDS |
AAGCTGAGAGGCTAATCTAG+TGG | 0.613975 | 2_2:+69932189 | None:intergenic |
GCGATCAAATTGCTTACGAA+GGG | 0.614392 | 2_2:+69932039 | None:intergenic |
AAAAGGCACTTCTCATTGGA+GGG | 0.617797 | 2_2:-69935495 | Msa0268060:CDS |
ATAGATGCAGGACCTTTACT+GGG | 0.619077 | 2_2:+69932235 | None:intergenic |
CGAAGGGAGACATTGCTTGG+GGG | 0.620540 | 2_2:+69932055 | None:intergenic |
GTACAGCTTTGATGATGCCA+TGG | 0.620725 | 2_2:+69936406 | None:intergenic |
TATTGCAGGGGAAAGAGCTA+GGG | 0.628345 | 2_2:-69930800 | Msa0268060:CDS |
CTGTCTATTAACGTGAGCTG+AGG | 0.628586 | 2_2:-69930236 | Msa0268060:three_prime_UTR |
ACGAAGGGAGACATTGCTTG+GGG | 0.632300 | 2_2:+69932054 | None:intergenic |
CAGTTGAACATGGTTCTGGA+AGG | 0.632339 | 2_2:-69932111 | Msa0268060:CDS |
ACAGAATAAAATAATAATGG+TGG | 0.633432 | 2_2:+69937606 | None:intergenic |
CGAGCCGAACGTTGTCAGAG+TGG | 0.638950 | 2_2:+69930974 | None:intergenic |
ACGTTAGGTAGGTAGCAAGA+TGG | 0.644922 | 2_2:+69937772 | None:intergenic |
CTTATTCCCAATAACAGCAG+CGG | 0.650581 | 2_2:+69936638 | None:intergenic |
CGTTCGGCTCGAGCATGACG+TGG | 0.650902 | 2_2:-69930962 | Msa0268060:CDS |
GAATAGAGTAATTAAATGTG+GGG | 0.653309 | 2_2:+69937571 | None:intergenic |
TACTAAATGGTATATTACAG+GGG | 0.654242 | 2_2:-69933865 | Msa0268060:CDS |
TCTTATTTGATATTGTTTGG+GGG | 0.654743 | 2_2:-69934766 | Msa0268060:CDS |
TAGGAGTTGCACTCGACACG+AGG | 0.657321 | 2_2:-69930826 | Msa0268060:CDS |
ATCGAACTTCTACTACACCC+AGG | 0.658471 | 2_2:-69930521 | Msa0268060:CDS |
GGGGTGAAGATGCAAAGAGG+AGG | 0.659495 | 2_2:-69934747 | Msa0268060:CDS |
ATCTTCTATCACTACCAACA+AGG | 0.664353 | 2_2:-69933184 | Msa0268060:intron |
GTATACATTGAATCTAGGAG+CGG | 0.665030 | 2_2:+69936807 | None:intergenic |
TTGGTAGTGATAGAAGATGG+AGG | 0.668670 | 2_2:+69933189 | None:intergenic |
GATTAGTGTAGATAATGAGG+AGG | 0.671629 | 2_2:-69930407 | Msa0268060:three_prime_UTR |
GTTGATCTAATGATCTAACA+TGG | 0.680260 | 2_2:+69937549 | None:intergenic |
GTAGACGCACCAAATTCGGA+AGG | 0.687181 | 2_2:-69937240 | Msa0268060:intron |
ATAAACAGAGACACAGAGAG+AGG | 0.687378 | 2_2:+69937733 | None:intergenic |
TGAGTGCTGGTCACTCATGG+AGG | 0.691926 | 2_2:-69935347 | Msa0268060:CDS |
AGTGATGCACTAGAAAGTGA+AGG | 0.692132 | 2_2:-69931291 | Msa0268060:CDS |
TATCATCTAAAACAGCCTTG+AGG | 0.698493 | 2_2:+69930935 | None:intergenic |
TAATGTTCATCAGTTTACGA+CGG | 0.715221 | 2_2:+69931388 | None:intergenic |
ACTAAATGGTATATTACAGG+GGG | 0.716870 | 2_2:-69933864 | Msa0268060:CDS |
GGAACAGTGATTAAGCTGAG+AGG | 0.722001 | 2_2:+69932177 | None:intergenic |
GACACGAGGAGTTATTGCAG+GGG | 0.745141 | 2_2:-69930812 | Msa0268060:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAATCATTCAAATATTTT+GGG | - | chr2_2:69934399-69934418 | Msa0268060:intron | 10.0% |
!!! | AAATAATATTGTTATTACTA+AGG | + | chr2_2:69935468-69935487 | None:intergenic | 10.0% |
!!! | TTATTTTCTCTTATATAACT+TGG | + | chr2_2:69931944-69931963 | None:intergenic | 15.0% |
!! | AAGTTATATAAGAGAAAATA+AGG | - | chr2_2:69931943-69931962 | Msa0268060:intron | 15.0% |
!! | AGTTATATAAGAGAAAATAA+GGG | - | chr2_2:69931944-69931963 | Msa0268060:intron | 15.0% |
!! | CAAAATTGTGAATATTTATA+GGG | + | chr2_2:69931987-69932006 | None:intergenic | 15.0% |
!! | ACAAAATTGTGAATATTTAT+AGG | + | chr2_2:69931988-69932007 | None:intergenic | 15.0% |
!!! | AAGTGTGATTTTATTTTATA+GGG | + | chr2_2:69932018-69932037 | None:intergenic | 15.0% |
!!! | AAAGTGTGATTTTATTTTAT+AGG | + | chr2_2:69932019-69932038 | None:intergenic | 15.0% |
!!! | AAAGTGTGATTTATTTTTAT+AGG | - | chr2_2:69932172-69932191 | Msa0268060:CDS | 15.0% |
!!! | AAGTGTGATTTATTTTTATA+GGG | - | chr2_2:69932173-69932192 | Msa0268060:CDS | 15.0% |
!!! | TCATTTTCTTTTTATTTTCT+GGG | + | chr2_2:69932247-69932266 | None:intergenic | 15.0% |
!! | AAAATAAAAAGAAAATGACT+GGG | - | chr2_2:69932249-69932268 | Msa0268060:CDS | 15.0% |
!!! | ACATTTTAAAAAAGTTAACT+AGG | - | chr2_2:69932875-69932894 | Msa0268060:intron | 15.0% |
!!! | ATTTGAATTTTGAAAAGAAA+AGG | - | chr2_2:69933371-69933390 | Msa0268060:intron | 15.0% |
!! | GATAAAGTTCTTTATATATT+TGG | - | chr2_2:69933510-69933529 | Msa0268060:intron | 15.0% |
!!! | ATATAAATCATTTAAGGTTT+TGG | + | chr2_2:69933550-69933569 | None:intergenic | 15.0% |
!! | AAGTGAATATAAATCATTTA+AGG | + | chr2_2:69933556-69933575 | None:intergenic | 15.0% |
!! | TATTTGAATGATTAAAGAAA+TGG | + | chr2_2:69934395-69934414 | None:intergenic | 15.0% |
!!! | CTTTAATCATTCAAATATTT+TGG | - | chr2_2:69934398-69934417 | Msa0268060:intron | 15.0% |
!!! | TGGAGAAATAATATTTTTAA+AGG | - | chr2_2:69934450-69934469 | Msa0268060:CDS | 15.0% |
!! | AAAATCTACTTCAATATTAT+TGG | + | chr2_2:69934651-69934670 | None:intergenic | 15.0% |
!! | TTGATATTGTAAAAAATGAA+TGG | - | chr2_2:69934773-69934792 | Msa0268060:CDS | 15.0% |
!! | ACAGAATAAAATAATAATGG+TGG | + | chr2_2:69930400-69930419 | None:intergenic | 20.0% |
!! | GACACAGAATAAAATAATAA+TGG | + | chr2_2:69930403-69930422 | None:intergenic | 20.0% |
!! | AATTAAATTAGAGACGAAAT+TGG | + | chr2_2:69930571-69930590 | None:intergenic | 20.0% |
!! | TCTTACTATAATTGTGAAAT+TGG | - | chr2_2:69930973-69930992 | Msa0268060:CDS | 20.0% |
!! | ATAATTGTGAAATTGGAATT+TGG | - | chr2_2:69930980-69930999 | Msa0268060:CDS | 20.0% |
!! | AAATGAAATGAAATGAAATG+AGG | + | chr2_2:69931022-69931041 | None:intergenic | 20.0% |
!! | ATTTCATTTCATTTCATTTC+AGG | - | chr2_2:69931023-69931042 | Msa0268060:CDS | 20.0% |
!! | TTTCATTTCATTTCATTTCA+GGG | - | chr2_2:69931024-69931043 | Msa0268060:CDS | 20.0% |
!! | AAAATAGAAGACAGTTAAAA+TGG | + | chr2_2:69931695-69931714 | None:intergenic | 20.0% |
!!! | TATGAGTTGAGAAATTTAAT+GGG | + | chr2_2:69931820-69931839 | None:intergenic | 20.0% |
!!! | TTATGAGTTGAGAAATTTAA+TGG | + | chr2_2:69931821-69931840 | None:intergenic | 20.0% |
!!! | AAGAATTTCATCAACATTTT+TGG | + | chr2_2:69932078-69932097 | None:intergenic | 20.0% |
!!! | TGTTGATGAAATTCTTTTAT+AGG | - | chr2_2:69932082-69932101 | Msa0268060:CDS | 20.0% |
!!! | GTTGATGAAATTCTTTTATA+GGG | - | chr2_2:69932083-69932102 | Msa0268060:CDS | 20.0% |
!!! | ATGCTGATGAAAATTTTATA+AGG | - | chr2_2:69932113-69932132 | Msa0268060:CDS | 20.0% |
!!! | GTCATTTTCTTTTTATTTTC+TGG | + | chr2_2:69932248-69932267 | None:intergenic | 20.0% |
!! | GAAAATAAAAAGAAAATGAC+TGG | - | chr2_2:69932248-69932267 | Msa0268060:CDS | 20.0% |
!! | AAAGTTCTTTATATATTTGG+AGG | - | chr2_2:69933513-69933532 | Msa0268060:intron | 20.0% |
!! | TTGTATCTTTACTATATTAG+TGG | - | chr2_2:69933615-69933634 | Msa0268060:intron | 20.0% |
!! | ATCGAATAATATATAGTGAA+GGG | + | chr2_2:69934019-69934038 | None:intergenic | 20.0% |
!! | TATCGAATAATATATAGTGA+AGG | + | chr2_2:69934020-69934039 | None:intergenic | 20.0% |
!!! | TATTATTTCTCCAATTCTAA+AGG | + | chr2_2:69934443-69934462 | None:intergenic | 20.0% |
!! | TTTAAAGGAAAATTAGTTAC+AGG | - | chr2_2:69934465-69934484 | Msa0268060:CDS | 20.0% |
!! | TTAAAGGAAAATTAGTTACA+GGG | - | chr2_2:69934466-69934485 | Msa0268060:CDS | 20.0% |
!!! | TTGGGAAGTAAAATTTTATT+GGG | - | chr2_2:69934549-69934568 | Msa0268060:intron | 20.0% |
!! | TTACCAAAAGAAGATATTAT+TGG | - | chr2_2:69934575-69934594 | Msa0268060:intron | 20.0% |
!! | TACCAAAAGAAGATATTATT+GGG | - | chr2_2:69934576-69934595 | Msa0268060:intron | 20.0% |
!!! | GATTTTATTTTAGTCAGTAT+TGG | - | chr2_2:69934665-69934684 | Msa0268060:intron | 20.0% |
!! | TTTGTTTATAAATTGTGCTA+TGG | - | chr2_2:69934691-69934710 | Msa0268060:CDS | 20.0% |
!! | TTAGTTATTGTGTTAATTGA+TGG | - | chr2_2:69934890-69934909 | Msa0268060:intron | 20.0% |
!! | AACTAAAGAGTTATATTTGA+AGG | + | chr2_2:69934964-69934983 | None:intergenic | 20.0% |
!! | TTATTCATTTACTACAATAG+AGG | - | chr2_2:69934998-69935017 | Msa0268060:intron | 20.0% |
!! | ACATCATATTGTAAAAATGA+GGG | + | chr2_2:69935372-69935391 | None:intergenic | 20.0% |
!! | AACATCATATTGTAAAAATG+AGG | + | chr2_2:69935373-69935392 | None:intergenic | 20.0% |
!! | CTAACATCAATAAAGAAAAA+AGG | + | chr2_2:69936061-69936080 | None:intergenic | 20.0% |
!! | ACATGCATAAATATTAGATA+AGG | - | chr2_2:69936217-69936236 | Msa0268060:intron | 20.0% |
!! | ATGACCAAAAAAATGAAAAA+AGG | - | chr2_2:69936300-69936319 | Msa0268060:intron | 20.0% |
!! | GAATCCTATTAAAGAAAATA+CGG | + | chr2_2:69936412-69936431 | None:intergenic | 20.0% |
!! | ACTTCTTAATATGTTATTAG+TGG | + | chr2_2:69937709-69937728 | None:intergenic | 20.0% |
!! | TAGTAGTAATTATTAGCTTG+AGG | + | chr2_2:69930334-69930353 | None:intergenic | 25.0% |
! | GAATAGAGTAATTAAATGTG+GGG | + | chr2_2:69930435-69930454 | None:intergenic | 25.0% |
! | GGAATAGAGTAATTAAATGT+GGG | + | chr2_2:69930436-69930455 | None:intergenic | 25.0% |
! | TGGAATAGAGTAATTAAATG+TGG | + | chr2_2:69930437-69930456 | None:intergenic | 25.0% |
! | GAAGTTAATTACATTGAGAA+TGG | + | chr2_2:69930941-69930960 | None:intergenic | 25.0% |
! | CATTATCAATTTCATGAGAA+TGG | + | chr2_2:69931092-69931111 | None:intergenic | 25.0% |
! | AAGACAGTTAAAATGGTAAT+TGG | + | chr2_2:69931688-69931707 | None:intergenic | 25.0% |
! | ATAATGTGGTTATTCACATA+AGG | + | chr2_2:69931854-69931873 | None:intergenic | 25.0% |
! | TCACTAATTGATGAATAATG+TGG | + | chr2_2:69931868-69931887 | None:intergenic | 25.0% |
! | TGTGCATGATATAGATATTA+TGG | - | chr2_2:69931888-69931907 | Msa0268060:intron | 25.0% |
! | GTGCATGATATAGATATTAT+GGG | - | chr2_2:69931889-69931908 | Msa0268060:intron | 25.0% |
!!! | TAACGATTTTAACATGTTTG+GGG | + | chr2_2:69931916-69931935 | None:intergenic | 25.0% |
!!! | CTAACGATTTTAACATGTTT+GGG | + | chr2_2:69931917-69931936 | None:intergenic | 25.0% |
!!! | TCTAACGATTTTAACATGTT+TGG | + | chr2_2:69931918-69931937 | None:intergenic | 25.0% |
!! | CATTTTCCTTAAGCATTTTA+AGG | - | chr2_2:69932051-69932070 | Msa0268060:CDS | 25.0% |
!! | TTTAGTCCCTACAAAATTTT+CGG | + | chr2_2:69932153-69932172 | None:intergenic | 25.0% |
! | ACAAAACTGCAGATATTTAT+AGG | - | chr2_2:69932203-69932222 | Msa0268060:CDS | 25.0% |
! | CAAAACTGCAGATATTTATA+GGG | - | chr2_2:69932204-69932223 | Msa0268060:CDS | 25.0% |
!! | TTCTGGGTTAATTAAGTTTT+TGG | + | chr2_2:69932231-69932250 | None:intergenic | 25.0% |
!! | TAATTTTACCAGGTATCTTA+TGG | - | chr2_2:69932483-69932502 | Msa0268060:intron | 25.0% |
!! | AATTTTACCAGGTATCTTAT+GGG | - | chr2_2:69932484-69932503 | Msa0268060:intron | 25.0% |
!! | ATATTTTTCACACATGACAA+AGG | - | chr2_2:69932952-69932971 | Msa0268060:intron | 25.0% |
!! | AGCTCTTATTTGATATTGTT+TGG | - | chr2_2:69933234-69933253 | Msa0268060:CDS | 25.0% |
!! | GCTCTTATTTGATATTGTTT+GGG | - | chr2_2:69933235-69933254 | Msa0268060:CDS | 25.0% |
!! | CTCTTATTTGATATTGTTTG+GGG | - | chr2_2:69933236-69933255 | Msa0268060:CDS | 25.0% |
!! | TCTTATTTGATATTGTTTGG+GGG | - | chr2_2:69933237-69933256 | Msa0268060:CDS | 25.0% |
!!! | GAATTTTGAAAAGAAAAGGT+TGG | - | chr2_2:69933375-69933394 | Msa0268060:intron | 25.0% |
!! | ATTCCTTTTGATCTACTATA+TGG | - | chr2_2:69933431-69933450 | Msa0268060:intron | 25.0% |
! | AATCCATATAGTAGATCAAA+AGG | + | chr2_2:69933437-69933456 | None:intergenic | 25.0% |
!!! | ATTTAAGGTTTTGGATTTTG+AGG | + | chr2_2:69933541-69933560 | None:intergenic | 25.0% |
!! | ATATTCACTTGACTTTGAAA+CGG | - | chr2_2:69933566-69933585 | Msa0268060:intron | 25.0% |
! | TCGAATAATATATAGTGAAG+GGG | + | chr2_2:69934018-69934037 | None:intergenic | 25.0% |
!! | ATATGTTTCTTTTCTTCAGA+TGG | - | chr2_2:69934045-69934064 | Msa0268060:intron | 25.0% |
! | GTACTAAATGGTATATTACA+GGG | - | chr2_2:69934137-69934156 | Msa0268060:intron | 25.0% |
! | TACTAAATGGTATATTACAG+GGG | - | chr2_2:69934138-69934157 | Msa0268060:intron | 25.0% |
! | TTTGGGTCAATTTCAAATAA+AGG | - | chr2_2:69934416-69934435 | Msa0268060:intron | 25.0% |
! | TTGGGTCAATTTCAAATAAA+GGG | - | chr2_2:69934417-69934436 | Msa0268060:intron | 25.0% |
!! | GTTGGGAAGTAAAATTTTAT+TGG | - | chr2_2:69934548-69934567 | Msa0268060:intron | 25.0% |
! | TTACTAATAACATTACACCA+AGG | + | chr2_2:69935028-69935047 | None:intergenic | 25.0% |
! | TTGGTGTAATGTTATTAGTA+AGG | - | chr2_2:69935027-69935046 | Msa0268060:intron | 25.0% |
! | AGTAAATGAATGAAAAAGGT+CGG | + | chr2_2:69935178-69935197 | None:intergenic | 25.0% |
! | TTGCAGTAAATGAATGAAAA+AGG | + | chr2_2:69935182-69935201 | None:intergenic | 25.0% |
! | CATCATATTGTAAAAATGAG+GGG | + | chr2_2:69935371-69935390 | None:intergenic | 25.0% |
!!! | ATTTTGTTTCTTGACTTATC+AGG | - | chr2_2:69935692-69935711 | Msa0268060:intron | 25.0% |
!!! | GAGACCTTTTTTCATTTTTT+TGG | + | chr2_2:69936307-69936326 | None:intergenic | 25.0% |
! | ATATCATCTCAAAAGAAACT+GGG | + | chr2_2:69936464-69936483 | None:intergenic | 25.0% |
! | AATATCATCTCAAAAGAAAC+TGG | + | chr2_2:69936465-69936484 | None:intergenic | 25.0% |
! | CTACTTTACTTTCATAGTAT+TGG | + | chr2_2:69936792-69936811 | None:intergenic | 25.0% |
!!! | CATTCCATTTTTCCTTATTA+GGG | + | chr2_2:69936818-69936837 | None:intergenic | 25.0% |
!!! | ACATTCCATTTTTCCTTATT+AGG | + | chr2_2:69936819-69936838 | None:intergenic | 25.0% |
! | AATAAGGAAAAATGGAATGT+TGG | - | chr2_2:69936819-69936838 | Msa0268060:CDS | 25.0% |
! | AATACACTGTTACTAATTGA+AGG | + | chr2_2:69937678-69937697 | None:intergenic | 25.0% |
! | TTAGCTTGAGGTAGAAAAAA+TGG | + | chr2_2:69930322-69930341 | None:intergenic | 30.0% |
GTTGATCTAATGATCTAACA+TGG | + | chr2_2:69930457-69930476 | None:intergenic | 30.0% | |
TGTAAACTTCAGAATCTTCT+AGG | - | chr2_2:69930623-69930642 | Msa0268060:intron | 30.0% | |
GTAAACTTCAGAATCTTCTA+GGG | - | chr2_2:69930624-69930643 | Msa0268060:intron | 30.0% | |
TAGAAATTACCTTCCGAATT+TGG | + | chr2_2:69930775-69930794 | None:intergenic | 30.0% | |
! | TTGTTGTTGTCTTAGATTGA+AGG | - | chr2_2:69930849-69930868 | Msa0268060:intron | 30.0% |
ATTACATTGAGAATGGAGTT+TGG | + | chr2_2:69930934-69930953 | None:intergenic | 30.0% | |
TGACAATAATACCCAATTCT+CGG | + | chr2_2:69931160-69931179 | None:intergenic | 30.0% | |
TGGGTATTATTGTCAATTTC+TGG | - | chr2_2:69931165-69931184 | Msa0268060:CDS | 30.0% | |
GAGATGTATACATTGAATCT+AGG | + | chr2_2:69931204-69931223 | None:intergenic | 30.0% | |
TCACACGAAACAATAATAGT+TGG | + | chr2_2:69931242-69931261 | None:intergenic | 30.0% | |
TATTGGGAATAAGATCATAG+TGG | - | chr2_2:69931375-69931394 | Msa0268060:CDS | 30.0% | |
TTAGTGTCAATGTGTAATTG+TGG | + | chr2_2:69931482-69931501 | None:intergenic | 30.0% | |
!!! | TGCTTTTTGTTTTCATTCTC+AGG | - | chr2_2:69931547-69931566 | Msa0268060:intron | 30.0% |
!! | TGAATTTTGACACATTTTCG+TGG | - | chr2_2:69931573-69931592 | Msa0268060:intron | 30.0% |
GGATAATGTTTACCAAACTA+TGG | + | chr2_2:69931667-69931686 | None:intergenic | 30.0% | |
TTTGGTCCTTAAAATGCTTA+AGG | + | chr2_2:69932060-69932079 | None:intergenic | 30.0% | |
! | ACACTAACCGAAAATTTTGT+AGG | - | chr2_2:69932143-69932162 | Msa0268060:CDS | 30.0% |
! | CACTAACCGAAAATTTTGTA+GGG | - | chr2_2:69932144-69932163 | Msa0268060:CDS | 30.0% |
TCGACAATGAGGAATAAAAT+TGG | - | chr2_2:69932339-69932358 | Msa0268060:intron | 30.0% | |
! | AGTTGATATTTATGTGTGTC+TGG | - | chr2_2:69932431-69932450 | Msa0268060:CDS | 30.0% |
TACCTGGTAAAATTATCATC+AGG | + | chr2_2:69932478-69932497 | None:intergenic | 30.0% | |
! | TGTTGCTCTGATTATCTTTT+TGG | - | chr2_2:69932602-69932621 | Msa0268060:intron | 30.0% |
CTACAAACAAAAATTCCTAC+CGG | + | chr2_2:69932696-69932715 | None:intergenic | 30.0% | |
TGGAAATAGAAATTGCTCTA+GGG | - | chr2_2:69932734-69932753 | Msa0268060:intron | 30.0% | |
TGATATAAAGAACAACCACT+AGG | - | chr2_2:69932777-69932796 | Msa0268060:intron | 30.0% | |
AGTTAACTAGGTTACAATTG+AGG | - | chr2_2:69932887-69932906 | Msa0268060:intron | 30.0% | |
! | TTACAAAGCTTTTCATCTAC+TGG | + | chr2_2:69932918-69932937 | None:intergenic | 30.0% |
! | AGATGAAAAGCTTTGTAAGT+TGG | - | chr2_2:69932920-69932939 | Msa0268060:intron | 30.0% |
!!! | TCCATACTGATTTTGATACT+TGG | - | chr2_2:69933125-69933144 | Msa0268060:intron | 30.0% |
TCCAAGTATCAAAATCAGTA+TGG | + | chr2_2:69933129-69933148 | None:intergenic | 30.0% | |
GAGCTTTACATCATATAACT+AGG | - | chr2_2:69933147-69933166 | Msa0268060:intron | 30.0% | |
GTAAAGATACAAGACATATG+AGG | + | chr2_2:69933607-69933626 | None:intergenic | 30.0% | |
TAGTGGTAGAATTCAGTAAA+TGG | - | chr2_2:69933632-69933651 | Msa0268060:intron | 30.0% | |
ATTCAGTAAATGGATGAAGA+AGG | - | chr2_2:69933642-69933661 | Msa0268060:intron | 30.0% | |
AAAACTATCGTATTAGCTAC+TGG | - | chr2_2:69933670-69933689 | Msa0268060:intron | 30.0% | |
AATATGGTTATGTGGAAAGA+GGG | + | chr2_2:69933801-69933820 | None:intergenic | 30.0% | |
ACTTAATCAATTCAGCATCT+CGG | + | chr2_2:69933994-69934013 | None:intergenic | 30.0% | |
GGTACTAAATGGTATATTAC+AGG | - | chr2_2:69934136-69934155 | Msa0268060:intron | 30.0% | |
ACTAAATGGTATATTACAGG+GGG | - | chr2_2:69934139-69934158 | Msa0268060:intron | 30.0% | |
! | ACCTACTACTTTCTTTCTTT+TGG | - | chr2_2:69934224-69934243 | Msa0268060:intron | 30.0% |
ACCAAAAGAAAGAAAGTAGT+AGG | + | chr2_2:69934228-69934247 | None:intergenic | 30.0% | |
AACTACTACTTTCTTTCTCT+TGG | - | chr2_2:69934248-69934267 | Msa0268060:intron | 30.0% | |
! | TGTTGTTATGCTTCATTTTC+TGG | - | chr2_2:69934284-69934303 | Msa0268060:intron | 30.0% |
! | GTTGTTATGCTTCATTTTCT+GGG | - | chr2_2:69934285-69934304 | Msa0268060:intron | 30.0% |
!! | AAATAAAGGGCCTTTAGAAT+TGG | - | chr2_2:69934430-69934449 | Msa0268060:intron | 30.0% |
TGATCTGGCTAAAATTTAGT+TGG | - | chr2_2:69934530-69934549 | Msa0268060:CDS | 30.0% | |
GATCTGGCTAAAATTTAGTT+GGG | - | chr2_2:69934531-69934550 | Msa0268060:CDS | 30.0% | |
! | GACCCAATAATATCTTCTTT+TGG | + | chr2_2:69934581-69934600 | None:intergenic | 30.0% |
ATTGCTTAAACAAAGCCTTA+GGG | - | chr2_2:69934608-69934627 | Msa0268060:intron | 30.0% | |
TGTAAAAAATGAATGGTCTG+TGG | - | chr2_2:69934780-69934799 | Msa0268060:CDS | 30.0% | |
ACAATAGTCAATAGACATGT+TGG | + | chr2_2:69935287-69935306 | None:intergenic | 30.0% | |
! | AGTCTCATTTTCATAGTCAT+AGG | + | chr2_2:69935413-69935432 | None:intergenic | 30.0% |
!! | TTATTTCTAGATGTCTTGCA+TGG | - | chr2_2:69935482-69935501 | Msa0268060:CDS | 30.0% |
ATGAAATCTGTTGAATTACC+AGG | - | chr2_2:69935533-69935552 | Msa0268060:intron | 30.0% | |
TGAAATCTGTTGAATTACCA+GGG | - | chr2_2:69935534-69935553 | Msa0268060:intron | 30.0% | |
AGAGCATAAAGTTAATGTTC+TGG | - | chr2_2:69935648-69935667 | Msa0268060:intron | 30.0% | |
!! | AATGTTCTGGTTCATTCTTA+TGG | - | chr2_2:69935661-69935680 | Msa0268060:intron | 30.0% |
!!! | TGCCATGTGTTTTTAAAACA+TGG | - | chr2_2:69936133-69936152 | Msa0268060:intron | 30.0% |
!!! | CACCATGTTTTAAAAACACA+TGG | + | chr2_2:69936138-69936157 | None:intergenic | 30.0% |
AAAACACTAGGATATGTACA+GGG | + | chr2_2:69936179-69936198 | None:intergenic | 30.0% | |
AAAAACACTAGGATATGTAC+AGG | + | chr2_2:69936180-69936199 | None:intergenic | 30.0% | |
GCATGTATATTCAAACATAG+CGG | + | chr2_2:69936203-69936222 | None:intergenic | 30.0% | |
!!! | TTTTTTTGGTCATGAGATGT+GGG | + | chr2_2:69936293-69936312 | None:intergenic | 30.0% |
!!! | ATTTTTTTGGTCATGAGATG+TGG | + | chr2_2:69936294-69936313 | None:intergenic | 30.0% |
TACACACATATGTTATTGTC+TGG | - | chr2_2:69936352-69936371 | Msa0268060:CDS | 30.0% | |
TCCTATTAAAGAAAATACGG+CGG | + | chr2_2:69936409-69936428 | None:intergenic | 30.0% | |
! | TTAATGTTCTGCGTAACTTT+TGG | - | chr2_2:69936553-69936572 | Msa0268060:intron | 30.0% |
TAATGTTCATCAGTTTACGA+CGG | + | chr2_2:69936618-69936637 | None:intergenic | 30.0% | |
TTGTCCTTCAATATTAACCT+TGG | + | chr2_2:69936647-69936666 | None:intergenic | 30.0% | |
!!! | GTTTTGTTGATTTGATATCC+CGG | + | chr2_2:69936680-69936699 | None:intergenic | 30.0% |
TTTCCTGAGAATGATAAATC+AGG | - | chr2_2:69936742-69936761 | Msa0268060:intron | 30.0% | |
ACAGGAAATGGAGAAAAAAT+TGG | - | chr2_2:69936915-69936934 | Msa0268060:CDS | 30.0% | |
GACAATGTTTGATAAGTTGT+TGG | + | chr2_2:69937010-69937029 | None:intergenic | 30.0% | |
!! | TGTTTTAGATGATACACAGA+AGG | - | chr2_2:69937077-69937096 | Msa0268060:CDS | 30.0% |
GAGTGCTTCAAATGAATAAT+GGG | + | chr2_2:69937112-69937131 | None:intergenic | 30.0% | |
! | AGAGTGCTTCAAATGAATAA+TGG | + | chr2_2:69937113-69937132 | None:intergenic | 30.0% |
! | CTTTTATGCATGGTTATTGT+TGG | - | chr2_2:69937137-69937156 | Msa0268060:CDS | 30.0% |
!! | GGCTGATAAAATTTTGTTGT+AGG | - | chr2_2:69937158-69937177 | Msa0268060:intron | 30.0% |
! | CAGATTGTGTTTGAGTTTAT+TGG | - | chr2_2:69937305-69937324 | Msa0268060:intron | 30.0% |
TCTGATTAGTGTAGATAATG+AGG | - | chr2_2:69937593-69937612 | Msa0268060:five_prime_UTR | 30.0% | |
TGAGGTAGAAAAAATGGTGA+TGG | + | chr2_2:69930316-69930335 | None:intergenic | 35.0% | |
! | TTGCTTCAGAATAGAAGTAC+TGG | - | chr2_2:69930504-69930523 | Msa0268060:CDS | 35.0% |
AGAAGAAGAAAGAGAGAGTA+AGG | + | chr2_2:69930656-69930675 | None:intergenic | 35.0% | |
CAAAGCTGTTTGAAGAGTAA+GGG | + | chr2_2:69930690-69930709 | None:intergenic | 35.0% | |
TCAAAGCTGTTTGAAGAGTA+AGG | + | chr2_2:69930691-69930710 | None:intergenic | 35.0% | |
TGAAGTGAAGTGAAGATGTT+TGG | - | chr2_2:69930732-69930751 | Msa0268060:intron | 35.0% | |
GAAGTGAAGTGAAGATGTTT+GGG | - | chr2_2:69930733-69930752 | Msa0268060:intron | 35.0% | |
! | ATGGAGTTTGGAATTCGTTT+GGG | + | chr2_2:69930922-69930941 | None:intergenic | 35.0% |
! | AATGGAGTTTGGAATTCGTT+TGG | + | chr2_2:69930923-69930942 | None:intergenic | 35.0% |
TTCATTTCATTTCAGGGAGA+AGG | - | chr2_2:69931030-69931049 | Msa0268060:CDS | 35.0% | |
!! | TGAGCTACAAGTACTGATAT+TGG | + | chr2_2:69931130-69931149 | None:intergenic | 35.0% |
AATATCAGTACTTGTAGCTC+AGG | - | chr2_2:69931129-69931148 | Msa0268060:CDS | 35.0% | |
TATACATTGAATCTAGGAGC+GGG | + | chr2_2:69931198-69931217 | None:intergenic | 35.0% | |
GTATACATTGAATCTAGGAG+CGG | + | chr2_2:69931199-69931218 | None:intergenic | 35.0% | |
AATAAGATCATAGTGGTTGG+CGG | - | chr2_2:69931382-69931401 | Msa0268060:CDS | 35.0% | |
AATTGTGGACGGTTCTATAT+TGG | + | chr2_2:69931467-69931486 | None:intergenic | 35.0% | |
TGTCAATGTGTAATTGTGGA+CGG | + | chr2_2:69931478-69931497 | None:intergenic | 35.0% | |
!!! | GTCACATCACAGTTTTAGAA+AGG | + | chr2_2:69931515-69931534 | None:intergenic | 35.0% |
! | TCTAAAACTGTGATGTGACA+TGG | - | chr2_2:69931516-69931535 | Msa0268060:intron | 35.0% |
! | TAAGGGTACATTGAAACAAG+AGG | + | chr2_2:69931738-69931757 | None:intergenic | 35.0% |
!! | AAATCACACTTTTTAGTCCC+TGG | - | chr2_2:69932027-69932046 | Msa0268060:CDS | 35.0% |
ATGCTTAAGGAAAATGTCCA+GGG | + | chr2_2:69932047-69932066 | None:intergenic | 35.0% | |
AATGCTTAAGGAAAATGTCC+AGG | + | chr2_2:69932048-69932067 | None:intergenic | 35.0% | |
CAAATATGAACTCGACAATG+AGG | - | chr2_2:69932328-69932347 | Msa0268060:intron | 35.0% | |
! | TGAGGAATAAAATTGGTGTC+AGG | - | chr2_2:69932346-69932365 | Msa0268060:intron | 35.0% |
!! | GAGGAATAAAATTGGTGTCA+GGG | - | chr2_2:69932347-69932366 | Msa0268060:intron | 35.0% |
!! | AGGAATAAAATTGGTGTCAG+GGG | - | chr2_2:69932348-69932367 | Msa0268060:intron | 35.0% |
! | TGCCTGATGATAATTTTACC+AGG | - | chr2_2:69932473-69932492 | Msa0268060:intron | 35.0% |
!!! | TCTTTTTGGTGTTTGCAGTA+TGG | - | chr2_2:69932616-69932635 | Msa0268060:intron | 35.0% |
!!! | CTTTTTGGTGTTTGCAGTAT+GGG | - | chr2_2:69932617-69932636 | Msa0268060:intron | 35.0% |
GTGGAAATAGAAATTGCTCT+AGG | - | chr2_2:69932733-69932752 | Msa0268060:intron | 35.0% | |
TACACTAATACACTTCCTAG+TGG | + | chr2_2:69932795-69932814 | None:intergenic | 35.0% | |
CCTATCAAGAACAAACTCTT+TGG | + | chr2_2:69933182-69933201 | None:intergenic | 35.0% | |
! | CCAAAGAGTTTGTTCTTGAT+AGG | - | chr2_2:69933179-69933198 | Msa0268060:intron | 35.0% |
! | TGATCTACTATATGGATTGC+AGG | - | chr2_2:69933439-69933458 | Msa0268060:intron | 35.0% |
! | GATCTACTATATGGATTGCA+GGG | - | chr2_2:69933440-69933459 | Msa0268060:intron | 35.0% |
! | ATCTACTATATGGATTGCAG+GGG | - | chr2_2:69933441-69933460 | Msa0268060:intron | 35.0% |
! | TTTGAAACGGTAAGTAGTGT+AGG | - | chr2_2:69933579-69933598 | Msa0268060:intron | 35.0% |
GTAAATGGATGAAGAAGGAA+TGG | - | chr2_2:69933647-69933666 | Msa0268060:intron | 35.0% | |
ATGTGGAAAGAGGGAATAAT+AGG | + | chr2_2:69933792-69933811 | None:intergenic | 35.0% | |
GAATATGGTTATGTGGAAAG+AGG | + | chr2_2:69933802-69933821 | None:intergenic | 35.0% | |
GTTTATGTAAGCAAAAGGAG+AGG | + | chr2_2:69933883-69933902 | None:intergenic | 35.0% | |
GGAAGGTTTATGTAAGCAAA+AGG | + | chr2_2:69933888-69933907 | None:intergenic | 35.0% | |
TTTGCTTACATAAACCTTCC+AGG | - | chr2_2:69933888-69933907 | Msa0268060:CDS | 35.0% | |
! | ATTTGATAGAGCACTAGATC+AGG | + | chr2_2:69933944-69933963 | None:intergenic | 35.0% |
! | TTTCTTTTCTTCAGATGGCA+TGG | - | chr2_2:69934050-69934069 | Msa0268060:intron | 35.0% |
CAGCAGTAATAAAGTAGTTC+AGG | + | chr2_2:69934329-69934348 | None:intergenic | 35.0% | |
!!! | GGGTTTTGAATTCTGCTTTA+AGG | - | chr2_2:69934486-69934505 | Msa0268060:CDS | 35.0% |
!!! | GCTTTAAGGTCTTTTTTCCA+TGG | - | chr2_2:69934500-69934519 | Msa0268060:CDS | 35.0% |
GATTGCTTAAACAAAGCCTT+AGG | - | chr2_2:69934607-69934626 | Msa0268060:intron | 35.0% | |
TTGCTTAAACAAAGCCTTAG+GGG | - | chr2_2:69934609-69934628 | Msa0268060:intron | 35.0% | |
!! | TTGTTGGTAGTGATAGAAGA+TGG | + | chr2_2:69934820-69934839 | None:intergenic | 35.0% |
ATCTTCTATCACTACCAACA+AGG | - | chr2_2:69934819-69934838 | Msa0268060:intron | 35.0% | |
ACCAAAATCTCAAGTTCAGA+AGG | + | chr2_2:69935239-69935258 | None:intergenic | 35.0% | |
!! | GTGCTGCTTAATAAATGAAC+TGG | + | chr2_2:69935446-69935465 | None:intergenic | 35.0% |
AAAGACTACCTTGTTGCATT+TGG | - | chr2_2:69935588-69935607 | Msa0268060:intron | 35.0% | |
AAGACTACCTTGTTGCATTT+GGG | - | chr2_2:69935589-69935608 | Msa0268060:intron | 35.0% | |
CTTTGTCAAACCTGATTAGA+CGG | + | chr2_2:69935630-69935649 | None:intergenic | 35.0% | |
! | TTGTTTCTTGACTTATCAGG+TGG | - | chr2_2:69935695-69935714 | Msa0268060:intron | 35.0% |
!! | TTTTCAAGCAGTATAGATGC+AGG | + | chr2_2:69935783-69935802 | None:intergenic | 35.0% |
GTAATTGGGATCTACAGATT+CGG | + | chr2_2:69935928-69935947 | None:intergenic | 35.0% | |
ATACAATGCAGATGTCAAGA+TGG | - | chr2_2:69935995-69936014 | Msa0268060:intron | 35.0% | |
GAAAAAAGGTAGTTTACCTG+AGG | + | chr2_2:69936047-69936066 | None:intergenic | 35.0% | |
TTAGCCGTGTATTCTCATTT+AGG | - | chr2_2:69936077-69936096 | Msa0268060:intron | 35.0% | |
TGCTCCTAAATGAGAATACA+CGG | + | chr2_2:69936084-69936103 | None:intergenic | 35.0% | |
! | AAAACATGGTGTCAAACCTT+AGG | - | chr2_2:69936147-69936166 | Msa0268060:intron | 35.0% |
! | AAACATAGCGGAAAAACACT+AGG | + | chr2_2:69936191-69936210 | None:intergenic | 35.0% |
!!! | TTTTTTGGTCATGAGATGTG+GGG | + | chr2_2:69936292-69936311 | None:intergenic | 35.0% |
TGTCTGGATTTAACTGCATT+TGG | - | chr2_2:69936368-69936387 | Msa0268060:CDS | 35.0% | |
GTCTGGATTTAACTGCATTT+GGG | - | chr2_2:69936369-69936388 | Msa0268060:CDS | 35.0% | |
! | GATTTAACTGCATTTGGGTT+GGG | - | chr2_2:69936374-69936393 | Msa0268060:CDS | 35.0% |
ATTAAAGAAAATACGGCGGA+GGG | + | chr2_2:69936405-69936424 | None:intergenic | 35.0% | |
TATTAAAGAAAATACGGCGG+AGG | + | chr2_2:69936406-69936425 | None:intergenic | 35.0% | |
! | TCCGCCGTATTTTCTTTAAT+AGG | - | chr2_2:69936405-69936424 | Msa0268060:CDS | 35.0% |
CGTAAACTGATGAACATTAG+TGG | - | chr2_2:69936619-69936638 | Msa0268060:CDS | 35.0% | |
GTGCATCACTTTCAAATACT+TGG | + | chr2_2:69936702-69936721 | None:intergenic | 35.0% | |
GATCCTGATTTATCATTCTC+AGG | + | chr2_2:69936748-69936767 | None:intergenic | 35.0% | |
AAGGAAAAATGGAATGTTGG+AGG | - | chr2_2:69936822-69936841 | Msa0268060:CDS | 35.0% | |
AGGAAAAATGGAATGTTGGA+GGG | - | chr2_2:69936823-69936842 | Msa0268060:CDS | 35.0% | |
TTCCATTTCCTTCAATGCAT+CGG | + | chr2_2:69936941-69936960 | None:intergenic | 35.0% | |
! | TATCATCTAAAACAGCCTTG+AGG | + | chr2_2:69937071-69937090 | None:intergenic | 35.0% |
!! | ATTGGTGTTATTTCCCAAAC+TGG | - | chr2_2:69937323-69937342 | Msa0268060:intron | 35.0% |
AACCAGTTCAATAAGTCGAA+AGG | + | chr2_2:69937395-69937414 | None:intergenic | 35.0% | |
CAAACAGAGATTGCAATCTA+TGG | - | chr2_2:69937456-69937475 | Msa0268060:intron | 35.0% | |
GATTAGTGTAGATAATGAGG+AGG | - | chr2_2:69937596-69937615 | Msa0268060:five_prime_UTR | 35.0% | |
GAAGGATAGATAGAACTAAG+AGG | + | chr2_2:69937660-69937679 | None:intergenic | 35.0% | |
ATTCGAACGTTACGTTAGGT+AGG | + | chr2_2:69930245-69930264 | None:intergenic | 40.0% | |
!! | ATCGATTCGAACGTTACGTT+AGG | + | chr2_2:69930249-69930268 | None:intergenic | 40.0% |
ATAAACAGAGACACAGAGAG+AGG | + | chr2_2:69930273-69930292 | None:intergenic | 40.0% | |
AGAGTAATTAAATGTGGGGC+AGG | + | chr2_2:69930431-69930450 | None:intergenic | 40.0% | |
AAGGTTCAACAGCTTTCTGA+TGG | - | chr2_2:69930868-69930887 | Msa0268060:intron | 40.0% | |
TTGGGATGTCTAACAGTAAC+TGG | + | chr2_2:69930904-69930923 | None:intergenic | 40.0% | |
CTTATTCCCAATAACAGCAG+CGG | + | chr2_2:69931368-69931387 | None:intergenic | 40.0% | |
GGGAATAAGATCATAGTGGT+TGG | - | chr2_2:69931379-69931398 | Msa0268060:CDS | 40.0% | |
TGGATTGTTAGATGATGTGC+AGG | - | chr2_2:69931417-69931436 | Msa0268060:CDS | 40.0% | |
TGTTAGATGATGTGCAGGTA+TGG | - | chr2_2:69931422-69931441 | Msa0268060:intron | 40.0% | |
TGTGATGTGACATGGATTCT+TGG | - | chr2_2:69931524-69931543 | Msa0268060:intron | 40.0% | |
TTGCATGCAGGAATCTTTAG+GGG | + | chr2_2:69931641-69931660 | None:intergenic | 40.0% | |
CTTGCATGCAGGAATCTTTA+GGG | + | chr2_2:69931642-69931661 | None:intergenic | 40.0% | |
CTAAAGATTCCTGCATGCAA+GGG | - | chr2_2:69931641-69931660 | Msa0268060:intron | 40.0% | |
TGTCTTAGACAGTGCAACAA+TGG | + | chr2_2:69931762-69931781 | None:intergenic | 40.0% | |
GGGATTCTTTAATAGCGCAA+AGG | - | chr2_2:69932269-69932288 | Msa0268060:CDS | 40.0% | |
AAGGTTAACGAAAGTCAACC+AGG | - | chr2_2:69932288-69932307 | Msa0268060:CDS | 40.0% | |
ACGAAAGTCAACCAGGAATA+TGG | - | chr2_2:69932295-69932314 | Msa0268060:intron | 40.0% | |
GCAACTTTGAACCATATTCC+TGG | + | chr2_2:69932309-69932328 | None:intergenic | 40.0% | |
! | CCTTTTTCCCATAAGATACC+TGG | + | chr2_2:69932494-69932513 | None:intergenic | 40.0% |
CCAGGTATCTTATGGGAAAA+AGG | - | chr2_2:69932491-69932510 | Msa0268060:intron | 40.0% | |
!! | AAAAAGGCACTTCTCATTGG+AGG | - | chr2_2:69932507-69932526 | Msa0268060:intron | 40.0% |
!! | AAAAGGCACTTCTCATTGGA+GGG | - | chr2_2:69932508-69932527 | Msa0268060:intron | 40.0% |
! | ACCTGAAATTCTGTCACTTC+CGG | + | chr2_2:69932544-69932563 | None:intergenic | 40.0% |
TTGATACAGAAAGTGAGTGC+TGG | - | chr2_2:69932643-69932662 | Msa0268060:intron | 40.0% | |
! | TTGATCTCAAGTCGTTGACT+TGG | - | chr2_2:69933301-69933320 | Msa0268060:intron | 40.0% |
ATCACTTACGTGTAGTGAAG+TGG | + | chr2_2:69933330-69933349 | None:intergenic | 40.0% | |
ACATGGTTCAATCTTGGAGA+AGG | + | chr2_2:69933474-69933493 | None:intergenic | 40.0% | |
GTTGCTACATGGTTCAATCT+TGG | + | chr2_2:69933480-69933499 | None:intergenic | 40.0% | |
CATCATAGAGAGTTGCTACA+TGG | + | chr2_2:69933491-69933510 | None:intergenic | 40.0% | |
TGTTTATGGGAGGGAGAATA+TGG | + | chr2_2:69933817-69933836 | None:intergenic | 40.0% | |
! | CTGTCAAGTTGTTTATGGGA+GGG | + | chr2_2:69933826-69933845 | None:intergenic | 40.0% |
! | CGAGCTGTCAAGTTGTTTAT+GGG | + | chr2_2:69933830-69933849 | None:intergenic | 40.0% |
CCATAAACAACTTGACAGCT+CGG | - | chr2_2:69933828-69933847 | Msa0268060:intron | 40.0% | |
TAAGCAAAAGGAGAGGAACT+GGG | + | chr2_2:69933876-69933895 | None:intergenic | 40.0% | |
AGCATCTCGGACAATTCAAA+AGG | + | chr2_2:69933981-69934000 | None:intergenic | 40.0% | |
! | GCGTTTTGTGTGGTACTAAA+TGG | - | chr2_2:69934125-69934144 | Msa0268060:intron | 40.0% |
AAATGGTATATTACAGGGGG+TGG | - | chr2_2:69934142-69934161 | Msa0268060:intron | 40.0% | |
TTCCATGGCACAAAATGATC+TGG | - | chr2_2:69934515-69934534 | Msa0268060:CDS | 40.0% | |
!! | TTGGTAGTGATAGAAGATGG+AGG | + | chr2_2:69934817-69934836 | None:intergenic | 40.0% |
AAAAGGAATGAGCACCTTGT+TGG | + | chr2_2:69934836-69934855 | None:intergenic | 40.0% | |
AAATAGCACTAGAGCCAAGT+AGG | + | chr2_2:69934866-69934885 | None:intergenic | 40.0% | |
TTAATAGACGCTCTCATCAG+AGG | - | chr2_2:69934926-69934945 | Msa0268060:intron | 40.0% | |
!! | GAGAGGCTGTTTCTAAGATT+TGG | + | chr2_2:69935085-69935104 | None:intergenic | 40.0% |
TTAGTCTCCCTGATTCCATT+TGG | - | chr2_2:69935132-69935151 | Msa0268060:intron | 40.0% | |
! | GCCTTCTGAACTTGAGATTT+TGG | - | chr2_2:69935235-69935254 | Msa0268060:intron | 40.0% |
AGACTACCTTGTTGCATTTG+GGG | - | chr2_2:69935590-69935609 | Msa0268060:intron | 40.0% | |
!!! | CTGATTAGACGGCTCTTTTT+TGG | + | chr2_2:69935619-69935638 | None:intergenic | 40.0% |
CAAAAAAGAGCCGTCTAATC+AGG | - | chr2_2:69935617-69935636 | Msa0268060:intron | 40.0% | |
!! | GTTCTGGTTCATTCTTATGG+AGG | - | chr2_2:69935664-69935683 | Msa0268060:intron | 40.0% |
ATAGATGCAGGACCTTTACT+GGG | + | chr2_2:69935771-69935790 | None:intergenic | 40.0% | |
TATAGATGCAGGACCTTTAC+TGG | + | chr2_2:69935772-69935791 | None:intergenic | 40.0% | |
AACAGAGTCAACTAAGCGTT+GGG | + | chr2_2:69935850-69935869 | None:intergenic | 40.0% | |
TTAGCATCTGCAGTTGAACA+TGG | - | chr2_2:69935882-69935901 | Msa0268060:intron | 40.0% | |
GCGATCAAATTGCTTACGAA+GGG | + | chr2_2:69935967-69935986 | None:intergenic | 40.0% | |
AAGATGGACAAGAACTCAGA+TGG | - | chr2_2:69936011-69936030 | Msa0268060:intron | 40.0% | |
AGATGGAAGTTCTTTACCTC+AGG | - | chr2_2:69936028-69936047 | Msa0268060:intron | 40.0% | |
! | CCTAATGCTTTAAGTCCAAC+AGG | + | chr2_2:69936107-69936126 | None:intergenic | 40.0% |
! | CCTGTTGGACTTAAAGCATT+AGG | - | chr2_2:69936104-69936123 | Msa0268060:intron | 40.0% |
ATGTACAGGGTAAATGCCTA+AGG | + | chr2_2:69936166-69936185 | None:intergenic | 40.0% | |
!! | TTTTTGGTCATGAGATGTGG+GGG | + | chr2_2:69936291-69936310 | None:intergenic | 40.0% |
TGTGTATGTATTTGCCTGTG+TGG | + | chr2_2:69936338-69936357 | None:intergenic | 40.0% | |
GGATTTAACTGCATTTGGGT+TGG | - | chr2_2:69936373-69936392 | Msa0268060:CDS | 40.0% | |
!! | CGTAACTTTTGGTGCATTTC+AGG | - | chr2_2:69936564-69936583 | Msa0268060:intron | 40.0% |
!! | AACTTTTGGTGCATTTCAGG+TGG | - | chr2_2:69936567-69936586 | Msa0268060:intron | 40.0% |
GGAGCCAAGGTTAATATTGA+AGG | - | chr2_2:69936640-69936659 | Msa0268060:CDS | 40.0% | |
AGTGATGCACTAGAAAGTGA+AGG | - | chr2_2:69936712-69936731 | Msa0268060:intron | 40.0% | |
GTAAAGTAGCAGCCCTAATA+AGG | - | chr2_2:69936803-69936822 | Msa0268060:intron | 40.0% | |
GCAGCCCTAATAAGGAAAAA+TGG | - | chr2_2:69936811-69936830 | Msa0268060:intron | 40.0% | |
ATCTGTCCATAAAAGCAGAC+AGG | - | chr2_2:69936897-69936916 | Msa0268060:CDS | 40.0% | |
!! | CCATTTCCTGTCTGCTTTTA+TGG | + | chr2_2:69936906-69936925 | None:intergenic | 40.0% |
CCATAAAAGCAGACAGGAAA+TGG | - | chr2_2:69936903-69936922 | Msa0268060:CDS | 40.0% | |
AAAATTGGCCGATGCATTGA+AGG | - | chr2_2:69936930-69936949 | Msa0268060:CDS | 40.0% | |
! | TAAGTTGTTGGCCTCTTCTT+GGG | + | chr2_2:69936998-69937017 | None:intergenic | 40.0% |
! | ATAAGTTGTTGGCCTCTTCT+TGG | + | chr2_2:69936999-69937018 | None:intergenic | 40.0% |
! | ATCTAAAACAGCCTTGAGGA+AGG | + | chr2_2:69937067-69937086 | None:intergenic | 40.0% |
! | CACTCTGATGCTTTTATGCA+TGG | - | chr2_2:69937127-69937146 | Msa0268060:CDS | 40.0% |
AACCTAACTCAGACCAGTTT+GGG | + | chr2_2:69937339-69937358 | None:intergenic | 40.0% | |
CAGTTCAATAAGTCGAAAGG+AGG | + | chr2_2:69937392-69937411 | None:intergenic | 40.0% | |
CTCCTTTCGACTTATTGAAC+TGG | - | chr2_2:69937390-69937409 | Msa0268060:intron | 40.0% | |
ACTGGTTGTCATCTCATTGT+TGG | - | chr2_2:69937408-69937427 | Msa0268060:intron | 40.0% | |
CGTGCAGTGAAGTAGATAAT+TGG | - | chr2_2:69937516-69937535 | Msa0268060:five_prime_UTR | 40.0% | |
CAGAAAAACTAGCAACGAAG+TGG | + | chr2_2:69937551-69937570 | None:intergenic | 40.0% | |
ACGTTAGGTAGGTAGCAAGA+TGG | + | chr2_2:69930234-69930253 | None:intergenic | 45.0% | |
CTCTGTGTCTCTGTTTATCC+AGG | - | chr2_2:69930275-69930294 | Msa0268060:three_prime_UTR | 45.0% | |
TCTCGTAGACGCACCAAATT+CGG | - | chr2_2:69930759-69930778 | Msa0268060:intron | 45.0% | |
AGGGAGAAGGAGAAGAAGAT+GGG | - | chr2_2:69931043-69931062 | Msa0268060:CDS | 45.0% | |
ATCAGTACTTGTAGCTCAGG+CGG | - | chr2_2:69931132-69931151 | Msa0268060:CDS | 45.0% | |
! | TGACACATTTTCGTGGACCA+TGG | - | chr2_2:69931580-69931599 | Msa0268060:intron | 45.0% |
!! | GTACAGCTTTGATGATGCCA+TGG | + | chr2_2:69931600-69931619 | None:intergenic | 45.0% |
! | ATCTTTAGGGGCAGACTACT+GGG | + | chr2_2:69931629-69931648 | None:intergenic | 45.0% |
! | AATCTTTAGGGGCAGACTAC+TGG | + | chr2_2:69931630-69931649 | None:intergenic | 45.0% |
CCTTGCATGCAGGAATCTTT+AGG | + | chr2_2:69931643-69931662 | None:intergenic | 45.0% | |
CCTAAAGATTCCTGCATGCA+AGG | - | chr2_2:69931640-69931659 | Msa0268060:intron | 45.0% | |
GACAGTGCAACAATGGCTAA+GGG | + | chr2_2:69931755-69931774 | None:intergenic | 45.0% | |
AGACAGTGCAACAATGGCTA+AGG | + | chr2_2:69931756-69931775 | None:intergenic | 45.0% | |
!! | GGGAAAAAGGCACTTCTCAT+TGG | - | chr2_2:69932504-69932523 | Msa0268060:intron | 45.0% |
ATTGGAGGGAAAACAGATCC+CGG | - | chr2_2:69932522-69932541 | Msa0268060:intron | 45.0% | |
! | CCTGAAATTCTGTCACTTCC+GGG | + | chr2_2:69932543-69932562 | None:intergenic | 45.0% |
TCTTGATAGGTTGCTCGCAA+TGG | - | chr2_2:69933192-69933211 | Msa0268060:CDS | 45.0% | |
CAATGGTCACAGTGTTGTCA+GGG | - | chr2_2:69933209-69933228 | Msa0268060:CDS | 45.0% | |
GGAGGGAGAATATGGTTATG+TGG | + | chr2_2:69933809-69933828 | None:intergenic | 45.0% | |
! | GCTGTCAAGTTGTTTATGGG+AGG | + | chr2_2:69933827-69933846 | None:intergenic | 45.0% |
! | CCGAGCTGTCAAGTTGTTTA+TGG | + | chr2_2:69933831-69933850 | None:intergenic | 45.0% |
TGGGGAAGACAAGGAATAAG+GGG | + | chr2_2:69933857-69933876 | None:intergenic | 45.0% | |
CTGGGGAAGACAAGGAATAA+GGG | + | chr2_2:69933858-69933877 | None:intergenic | 45.0% | |
ACTGGGGAAGACAAGGAATA+AGG | + | chr2_2:69933859-69933878 | None:intergenic | 45.0% | |
AAGCAAAAGGAGAGGAACTG+GGG | + | chr2_2:69933875-69933894 | None:intergenic | 45.0% | |
GTAAGCAAAAGGAGAGGAAC+TGG | + | chr2_2:69933877-69933896 | None:intergenic | 45.0% | |
TACATAAACCTTCCAGGCTC+TGG | - | chr2_2:69933894-69933913 | Msa0268060:CDS | 45.0% | |
ACATAAACCTTCCAGGCTCT+GGG | - | chr2_2:69933895-69933914 | Msa0268060:CDS | 45.0% | |
ATGTGGGTCTGAACTATGCA+AGG | + | chr2_2:69933921-69933940 | None:intergenic | 45.0% | |
! | AGAGCACTAGATCAGGATGT+GGG | + | chr2_2:69933937-69933956 | None:intergenic | 45.0% |
! | TAGAGCACTAGATCAGGATG+TGG | + | chr2_2:69933938-69933957 | None:intergenic | 45.0% |
GATGGCATGGTCAAGAGTAA+AGG | - | chr2_2:69934063-69934082 | Msa0268060:intron | 45.0% | |
TGGTCAAGAGTAAAGGTTCG+AGG | - | chr2_2:69934070-69934089 | Msa0268060:intron | 45.0% | |
! | AGCCAGATCATTTTGTGCCA+TGG | + | chr2_2:69934520-69934539 | None:intergenic | 45.0% |
AATGCTAACAAGTGCCCCTA+AGG | + | chr2_2:69934626-69934645 | None:intergenic | 45.0% | |
! | TCCTTTTCATGCCACCTACT+TGG | - | chr2_2:69934849-69934868 | Msa0268060:intron | 45.0% |
ACTACAATAGAGGCAAGCCT+TGG | - | chr2_2:69935008-69935027 | Msa0268060:intron | 45.0% | |
ACATGTGATCACCAGGTCTA+AGG | + | chr2_2:69935062-69935081 | None:intergenic | 45.0% | |
GATTTGGACATGTGATCACC+AGG | + | chr2_2:69935069-69935088 | None:intergenic | 45.0% | |
CCTTACTATTGCAAGCAGAG+AGG | + | chr2_2:69935102-69935121 | None:intergenic | 45.0% | |
CCTCTCTGCTTGCAATAGTA+AGG | - | chr2_2:69935099-69935118 | Msa0268060:intron | 45.0% | |
TCTCCCTGATTCCATTTGGT+GGG | - | chr2_2:69935136-69935155 | Msa0268060:intron | 45.0% | |
AAGGTCGGTAAAGTGCACAA+CGG | + | chr2_2:69935163-69935182 | None:intergenic | 45.0% | |
GAATTACCAGGGTTTCAGCT+TGG | - | chr2_2:69935545-69935564 | Msa0268060:intron | 45.0% | |
!! | CTTGGTGCTTGTGCAATACA+AGG | - | chr2_2:69935563-69935582 | Msa0268060:intron | 45.0% |
GACTACCTTGTTGCATTTGG+GGG | - | chr2_2:69935591-69935610 | Msa0268060:intron | 45.0% | |
! | GACTTATCAGGTGGAAGTGT+TGG | - | chr2_2:69935704-69935723 | Msa0268060:intron | 45.0% |
!! | TCAGGTGGAAGTGTTGGAAT+TGG | - | chr2_2:69935710-69935729 | Msa0268060:intron | 45.0% |
AGACGTTCAACTCCCAGTAA+AGG | - | chr2_2:69935756-69935775 | Msa0268060:intron | 45.0% | |
AAGCTGAGAGGCTAATCTAG+TGG | + | chr2_2:69935817-69935836 | None:intergenic | 45.0% | |
GGAACAGTGATTAAGCTGAG+AGG | + | chr2_2:69935829-69935848 | None:intergenic | 45.0% | |
CAACAGAGTCAACTAAGCGT+TGG | + | chr2_2:69935851-69935870 | None:intergenic | 45.0% | |
TCTGCAGTTGAACATGGTTC+TGG | - | chr2_2:69935888-69935907 | Msa0268060:intron | 45.0% | |
!! | CAGTTGAACATGGTTCTGGA+AGG | - | chr2_2:69935892-69935911 | Msa0268060:intron | 45.0% |
ACATTGCTTGGGGGGTAATT+GGG | + | chr2_2:69935942-69935961 | None:intergenic | 45.0% | |
TACGAAGGGAGACATTGCTT+GGG | + | chr2_2:69935953-69935972 | None:intergenic | 45.0% | |
TTACGAAGGGAGACATTGCT+TGG | + | chr2_2:69935954-69935973 | None:intergenic | 45.0% | |
CGCGATCAAATTGCTTACGA+AGG | + | chr2_2:69935968-69935987 | None:intergenic | 45.0% | |
!! | TCTCATTTAGGAGCACCTGT+TGG | - | chr2_2:69936089-69936108 | Msa0268060:intron | 45.0% |
! | TTTTGGTCATGAGATGTGGG+GGG | + | chr2_2:69936290-69936309 | None:intergenic | 45.0% |
GATGAACATTAGTGGAGCCA+AGG | - | chr2_2:69936627-69936646 | Msa0268060:CDS | 45.0% | |
! | GAAGGACAAGTGTTGTTGTC+CGG | - | chr2_2:69936658-69936677 | Msa0268060:intron | 45.0% |
! | AAGGACAAGTGTTGTTGTCC+GGG | - | chr2_2:69936659-69936678 | Msa0268060:intron | 45.0% |
TTGTCCACTCTGACAACGTT+CGG | - | chr2_2:69937025-69937044 | Msa0268060:intron | 45.0% | |
TTATTGCAGGGGAAAGAGCT+AGG | - | chr2_2:69937202-69937221 | Msa0268060:intron | 45.0% | |
TATTGCAGGGGAAAGAGCTA+GGG | - | chr2_2:69937203-69937222 | Msa0268060:intron | 45.0% | |
! | TTCCCAAACTGGTCTGAGTT+AGG | - | chr2_2:69937334-69937353 | Msa0268060:intron | 45.0% |
GAACCTAACTCAGACCAGTT+TGG | + | chr2_2:69937340-69937359 | None:intergenic | 45.0% | |
ATCGAACTTCTACTACACCC+AGG | - | chr2_2:69937482-69937501 | Msa0268060:five_prime_UTR | 45.0% | |
TGCACGTGAAATGGTTTCCT+GGG | + | chr2_2:69937502-69937521 | None:intergenic | 45.0% | |
CTACTTCACTGCACGTGAAA+TGG | + | chr2_2:69937511-69937530 | None:intergenic | 45.0% | |
CTGTCTATTAACGTGAGCTG+AGG | - | chr2_2:69937767-69937786 | Msa0268060:five_prime_UTR | 45.0% | |
TCTATTAACGTGAGCTGAGG+TGG | - | chr2_2:69937770-69937789 | Msa0268060:five_prime_UTR | 45.0% | |
CTGAAGCAAGCAAGCAAGCA+AGG | + | chr2_2:69930493-69930512 | None:intergenic | 50.0% | |
!! | AAGTACTGGCACTGCTGCTT+CGG | - | chr2_2:69930518-69930537 | Msa0268060:CDS | 50.0% |
GTAGACGCACCAAATTCGGA+AGG | - | chr2_2:69930763-69930782 | Msa0268060:intron | 50.0% | |
CAGGGAGAAGGAGAAGAAGA+TGG | - | chr2_2:69931042-69931061 | Msa0268060:CDS | 50.0% | |
GGGAGAAGGAGAAGAAGATG+GGG | - | chr2_2:69931044-69931063 | Msa0268060:CDS | 50.0% | |
GAAGATGGGGATGCAGTTAC+CGG | - | chr2_2:69931057-69931076 | Msa0268060:CDS | 50.0% | |
ATGAGAATGGCCACTTGAGC+CGG | + | chr2_2:69931079-69931098 | None:intergenic | 50.0% | |
TAGCATGCCGCTGCTGTTAT+TGG | - | chr2_2:69931358-69931377 | Msa0268060:CDS | 50.0% | |
AGCATGCCGCTGCTGTTATT+GGG | - | chr2_2:69931359-69931378 | Msa0268060:CDS | 50.0% | |
AAACTATGGCCCTTGCATGC+AGG | + | chr2_2:69931653-69931672 | None:intergenic | 50.0% | |
TGCATGCAAGGGCCATAGTT+TGG | - | chr2_2:69931652-69931671 | Msa0268060:intron | 50.0% | |
CCCGGAAGTGACAGAATTTC+AGG | - | chr2_2:69932540-69932559 | Msa0268060:intron | 50.0% | |
!! | AAGTGAGTGCTGGTCACTCA+TGG | - | chr2_2:69932653-69932672 | Msa0268060:intron | 50.0% |
TGGTCACTCATGGAGGCAAA+GGG | - | chr2_2:69932663-69932682 | Msa0268060:intron | 50.0% | |
GCAATGGTCACAGTGTTGTC+AGG | - | chr2_2:69933208-69933227 | Msa0268060:CDS | 50.0% | |
TTGGGGGTGAAGATGCAAAG+AGG | - | chr2_2:69933253-69933272 | Msa0268060:CDS | 50.0% | |
! | CTTGACTCGTGAAGAAGCTC+AGG | + | chr2_2:69933708-69933727 | None:intergenic | 50.0% |
TTCCATCCATCACCTAGAGC+TGG | - | chr2_2:69934094-69934113 | Msa0268060:intron | 50.0% | |
!! | AACCAGCTCTAGGTGATGGA+TGG | + | chr2_2:69934099-69934118 | None:intergenic | 50.0% |
!! | CAACAACCAGCTCTAGGTGA+TGG | + | chr2_2:69934103-69934122 | None:intergenic | 50.0% |
TCACCTAGAGCTGGTTGTTG+TGG | - | chr2_2:69934103-69934122 | Msa0268060:intron | 50.0% | |
! | GGTTGTTGTGGCGTTTTGTG+TGG | - | chr2_2:69934115-69934134 | Msa0268060:intron | 50.0% |
GTATTCCCACCTCATTTCCC+AGG | - | chr2_2:69934730-69934749 | Msa0268060:CDS | 50.0% | |
CATGTCCTGGGAAATGAGGT+GGG | + | chr2_2:69934738-69934757 | None:intergenic | 50.0% | |
TCTCCATGTCCTGGGAAATG+AGG | + | chr2_2:69934742-69934761 | None:intergenic | 50.0% | |
TCAGAGTCTCTCCATGTCCT+GGG | + | chr2_2:69934750-69934769 | None:intergenic | 50.0% | |
ATCAGAGTCTCTCCATGTCC+TGG | + | chr2_2:69934751-69934770 | None:intergenic | 50.0% | |
GCCAAGTAGGTGGCATGAAA+AGG | + | chr2_2:69934853-69934872 | None:intergenic | 50.0% | |
TAGCACTAGAGCCAAGTAGG+TGG | + | chr2_2:69934863-69934882 | None:intergenic | 50.0% | |
TAGACGCTCTCATCAGAGGA+TGG | - | chr2_2:69934930-69934949 | Msa0268060:intron | 50.0% | |
! | GGTTGTTGTTGCCTTAGACC+TGG | - | chr2_2:69935048-69935067 | Msa0268060:intron | 50.0% |
GTCTCCCTGATTCCATTTGG+TGG | - | chr2_2:69935135-69935154 | Msa0268060:intron | 50.0% | |
GGTCCCACCAAATGGAATCA+GGG | + | chr2_2:69935142-69935161 | None:intergenic | 50.0% | |
TGGATCCCCCAAATGCAACA+AGG | + | chr2_2:69935599-69935618 | None:intergenic | 50.0% | |
GACATTGCTTGGGGGGTAAT+TGG | + | chr2_2:69935943-69935962 | None:intergenic | 50.0% | |
ACGAAGGGAGACATTGCTTG+GGG | + | chr2_2:69935952-69935971 | None:intergenic | 50.0% | |
TGGAATGTTGGAGGGTCAAC+TGG | - | chr2_2:69936831-69936850 | Msa0268060:CDS | 50.0% | |
AGCAGAGAAGCTGCAGAGAA+AGG | - | chr2_2:69936868-69936887 | Msa0268060:CDS | 50.0% | |
GGCCGATGCATTGAAGGAAA+TGG | - | chr2_2:69936936-69936955 | Msa0268060:CDS | 50.0% | |
TTACTGCGAGAGAAGCTAGC+CGG | - | chr2_2:69936961-69936980 | Msa0268060:CDS | 50.0% | |
TTCTTGGGCCAACTCTAGAC+CGG | + | chr2_2:69936983-69937002 | None:intergenic | 50.0% | |
! | TCTAGAGTTGGCCCAAGAAG+AGG | - | chr2_2:69936984-69937003 | Msa0268060:intron | 50.0% |
TCGACACGAGGAGTTATTGC+AGG | - | chr2_2:69937189-69937208 | Msa0268060:intron | 50.0% | |
CGACACGAGGAGTTATTGCA+GGG | - | chr2_2:69937190-69937209 | Msa0268060:intron | 50.0% | |
GACACGAGGAGTTATTGCAG+GGG | - | chr2_2:69937191-69937210 | Msa0268060:intron | 50.0% | |
! | AGCTAGGGCATTCCAACTAC+AGG | - | chr2_2:69937218-69937237 | Msa0268060:intron | 50.0% |
GGGCATTCCAACTACAGGTA+CGG | - | chr2_2:69937223-69937242 | Msa0268060:intron | 50.0% | |
GATGTAGCCGTACCTGTAGT+TGG | + | chr2_2:69937233-69937252 | None:intergenic | 50.0% | |
CTGCACGTGAAATGGTTTCC+TGG | + | chr2_2:69937503-69937522 | None:intergenic | 50.0% | |
!! | TGGTGATGGTACTGCACTGC+TGG | + | chr2_2:69930302-69930321 | None:intergenic | 55.0% |
! | ACTGCTGCTTCGGTTCAAGC+TGG | - | chr2_2:69930528-69930547 | Msa0268060:CDS | 55.0% |
! | CTGCTGCTTCGGTTCAAGCT+GGG | - | chr2_2:69930529-69930548 | Msa0268060:CDS | 55.0% |
!! | GATGCAGTTACCGGCTCAAG+TGG | - | chr2_2:69931066-69931085 | Msa0268060:CDS | 55.0% |
CTCAGGCGGTTCCGAGAATT+GGG | - | chr2_2:69931146-69931165 | Msa0268060:CDS | 55.0% | |
!! | TGAGTGCTGGTCACTCATGG+AGG | - | chr2_2:69932656-69932675 | Msa0268060:intron | 55.0% |
CTGGTCACTCATGGAGGCAA+AGG | - | chr2_2:69932662-69932681 | Msa0268060:intron | 55.0% | |
GGAGGCAAAGGGAGACATAC+CGG | - | chr2_2:69932674-69932693 | Msa0268060:intron | 55.0% | |
GCAAAGGGAGACATACCGGT+AGG | - | chr2_2:69932678-69932697 | Msa0268060:intron | 55.0% | |
AGCTGCGCTACTTCTTAGCG+TGG | - | chr2_2:69932714-69932733 | Msa0268060:intron | 55.0% | |
GGGGTGAAGATGCAAAGAGG+AGG | - | chr2_2:69933256-69933275 | Msa0268060:intron | 55.0% | |
GAGAGGAACTGGGGAAGACA+AGG | + | chr2_2:69933866-69933885 | None:intergenic | 55.0% | |
ACGCCACAACAACCAGCTCT+AGG | + | chr2_2:69934109-69934128 | None:intergenic | 55.0% | |
CCATGTCCTGGGAAATGAGG+TGG | + | chr2_2:69934739-69934758 | None:intergenic | 55.0% | |
CCACCTCATTTCCCAGGACA+TGG | - | chr2_2:69934736-69934755 | Msa0268060:CDS | 55.0% | |
CGGTCCCACCAAATGGAATC+AGG | + | chr2_2:69935143-69935162 | None:intergenic | 55.0% | |
TGCACAACGGTCCCACCAAA+TGG | + | chr2_2:69935150-69935169 | None:intergenic | 55.0% | |
CAAGCACCAAGCTGAAACCC+TGG | + | chr2_2:69935554-69935573 | None:intergenic | 55.0% | |
GAAGGGAGACATTGCTTGGG+GGG | + | chr2_2:69935950-69935969 | None:intergenic | 55.0% | |
CGAAGGGAGACATTGCTTGG+GGG | + | chr2_2:69935951-69935970 | None:intergenic | 55.0% | |
GATGTGGGGGGTAACAAGAC+AGG | + | chr2_2:69936278-69936297 | None:intergenic | 55.0% | |
GGTCTCTCTCTAGTCCACAC+AGG | - | chr2_2:69936321-69936340 | Msa0268060:intron | 55.0% | |
TGCAGCTTCTCTGCTTGCCA+TGG | + | chr2_2:69936863-69936882 | None:intergenic | 55.0% | |
! | GAAGCTAGCCGGTCTAGAGT+TGG | - | chr2_2:69936972-69936991 | Msa0268060:intron | 55.0% |
TAGGAGTTGCACTCGACACG+AGG | - | chr2_2:69937177-69937196 | Msa0268060:intron | 55.0% | |
TGGTACTGCACTGCTGGTCC+TGG | + | chr2_2:69930296-69930315 | None:intergenic | 60.0% | |
GCTCAGGCGGTTCCGAGAAT+TGG | - | chr2_2:69931145-69931164 | Msa0268060:CDS | 60.0% | |
ACTATGCAAGGCCCAGAGCC+TGG | + | chr2_2:69933909-69933928 | None:intergenic | 60.0% | |
GGGTCAACTGGCAGCTTCCA+TGG | - | chr2_2:69936843-69936862 | Msa0268060:CDS | 60.0% | |
CGAGCCGAACGTTGTCAGAG+TGG | + | chr2_2:69937032-69937051 | None:intergenic | 60.0% | |
GCATGACGTGGCCTTCCTCA+AGG | - | chr2_2:69937053-69937072 | Msa0268060:intron | 60.0% | |
GTTGGCGGCGAGTCTGCTAC+TGG | - | chr2_2:69931397-69931416 | Msa0268060:CDS | 65.0% | |
TGCAAGGCCCAGAGCCTGGA+AGG | + | chr2_2:69933905-69933924 | None:intergenic | 65.0% | |
! | CGTTCGGCTCGAGCATGACG+TGG | - | chr2_2:69937041-69937060 | Msa0268060:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 69930213 | 69937812 | 69930213 | ID=Msa0268060;Name=Msa0268060 |
chr2_2 | mRNA | 69930213 | 69937812 | 69930213 | ID=Msa0268060-mRNA-1;Parent=Msa0268060;Name=Msa0268060-mRNA-1;_AED=0.11;_eAED=0.11;_QI=380|1|0.93|1|0.93|0.87|16|287|741 |
chr2_2 | exon | 69930213 | 69930586 | 69930213 | ID=Msa0268060-mRNA-1:exon:22387;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69930786 | 69930845 | 69930786 | ID=Msa0268060-mRNA-1:exon:22386;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69930927 | 69931439 | 69930927 | ID=Msa0268060-mRNA-1:exon:22385;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69931976 | 69932311 | 69931976 | ID=Msa0268060-mRNA-1:exon:22384;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69932387 | 69932470 | 69932387 | ID=Msa0268060-mRNA-1:exon:22383;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69933185 | 69933273 | 69933185 | ID=Msa0268060-mRNA-1:exon:22382;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69933847 | 69933961 | 69933847 | ID=Msa0268060-mRNA-1:exon:22381;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69934438 | 69934564 | 69934438 | ID=Msa0268060-mRNA-1:exon:22380;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69934685 | 69934824 | 69934685 | ID=Msa0268060-mRNA-1:exon:22379;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69935330 | 69935530 | 69935330 | ID=Msa0268060-mRNA-1:exon:22378;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69936352 | 69936456 | 69936352 | ID=Msa0268060-mRNA-1:exon:22377;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69936587 | 69936664 | 69936587 | ID=Msa0268060-mRNA-1:exon:22376;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69936813 | 69936980 | 69936813 | ID=Msa0268060-mRNA-1:exon:22375;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69937077 | 69937161 | 69937077 | ID=Msa0268060-mRNA-1:exon:22374;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69937241 | 69937320 | 69937241 | ID=Msa0268060-mRNA-1:exon:22373;Parent=Msa0268060-mRNA-1 |
chr2_2 | exon | 69937475 | 69937812 | 69937475 | ID=Msa0268060-mRNA-1:exon:22372;Parent=Msa0268060-mRNA-1 |
chr2_2 | five_prime_UTR | 69937475 | 69937812 | 69937475 | ID=Msa0268060-mRNA-1:five_prime_utr;Parent=Msa0268060-mRNA-1 |
chr2_2 | five_prime_UTR | 69937279 | 69937320 | 69937279 | ID=Msa0268060-mRNA-1:five_prime_utr;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69937241 | 69937278 | 69937241 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69937077 | 69937161 | 69937077 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69936813 | 69936980 | 69936813 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69936587 | 69936664 | 69936587 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69936352 | 69936456 | 69936352 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69935330 | 69935530 | 69935330 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69934685 | 69934824 | 69934685 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69934438 | 69934564 | 69934438 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69933847 | 69933961 | 69933847 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69933185 | 69933273 | 69933185 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69932387 | 69932470 | 69932387 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69931976 | 69932311 | 69931976 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69930927 | 69931439 | 69930927 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69930786 | 69930845 | 69930786 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | CDS | 69930500 | 69930586 | 69930500 | ID=Msa0268060-mRNA-1:cds;Parent=Msa0268060-mRNA-1 |
chr2_2 | three_prime_UTR | 69930213 | 69930499 | 69930213 | ID=Msa0268060-mRNA-1:three_prime_utr;Parent=Msa0268060-mRNA-1 |
Gene Sequence |
Protein sequence |