AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1341250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341250 MtrunA17_Chr4g0066851 94.751 743 13 2 1 741 1 719 0.0 1441
Msa1341250 MtrunA17_Chr2g0286241 70.147 747 169 11 1 741 1 699 0.0 1022
Msa1341250 MtrunA17_Chr7g0272641 33.077 390 230 4 27 415 121 480 6.19e-63 223
Msa1341250 MtrunA17_Chr1g0197401 35.207 338 192 3 80 414 13 326 6.60e-62 216
Msa1341250 MtrunA17_Chr1g0192821 26.471 272 169 5 82 353 65 305 1.47e-25 112
Msa1341250 MtrunA17_Chr1g0192821 28.276 290 171 7 82 368 15 270 7.14e-24 107
Msa1341250 MtrunA17_Chr1g0192821 33.023 215 136 6 205 416 55 264 1.86e-23 105
Msa1341250 MtrunA17_Chr1g0192821 24.380 242 137 7 79 312 112 315 7.54e-17 84.7
Msa1341250 MtrunA17_Chr1g0192821 32.484 157 97 4 262 416 11 160 1.08e-12 71.6
Msa1341250 MtrunA17_Chr4g0061581 28.846 260 153 6 79 334 62 293 1.33e-23 106
Msa1341250 MtrunA17_Chr4g0061581 24.917 301 180 10 89 377 19 285 1.23e-16 84.0
Msa1341250 MtrunA17_Chr4g0061581 28.571 196 124 6 219 399 16 210 8.78e-16 81.3
Msa1341250 MtrunA17_Chr1g0198221 26.032 315 171 12 88 376 13 291 1.31e-17 86.7
Msa1341250 MtrunA17_Chr1g0198221 31.140 228 124 9 81 301 113 314 1.36e-11 67.8
Msa1341250 MtrunA17_Chr2g0311721 27.143 210 131 7 208 410 53 247 3.68e-16 80.5
Msa1341250 MtrunA17_Chr2g0311721 28.333 180 125 4 215 392 8 185 3.77e-14 74.3
Msa1341250 MtrunA17_Chr2g0311721 23.684 266 154 8 82 334 60 289 1.71e-12 69.3
Msa1341250 MtrunA17_Chr4g0074871 26.860 242 137 9 96 330 279 487 1.09e-15 81.6
Msa1341250 MtrunA17_Chr4g0074871 25.483 259 157 7 92 349 333 556 1.76e-15 80.9
Msa1341250 MtrunA17_Chr4g0074871 26.257 179 126 3 225 403 333 505 1.64e-11 68.2
Msa1341250 MtrunA17_Chr1g0196221 25.701 214 122 8 139 330 7 205 4.43e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1341250 AT5G18590.2 60.131 765 223 17 1 740 1 708 0.0 852
Msa1341250 AT5G18590.1 60.131 765 223 17 1 740 1 708 0.0 852
Msa1341250 AT3G05420.2 31.532 444 271 7 39 477 131 546 2.78e-66 232
Msa1341250 AT3G05420.1 31.532 444 271 7 39 477 130 545 2.90e-66 232
Msa1341250 AT5G27630.2 32.737 391 235 4 82 469 172 537 2.38e-63 222
Msa1341250 AT5G27630.3 32.737 391 235 4 82 469 172 537 4.16e-63 223
Msa1341250 AT5G27630.1 35.503 338 190 4 81 415 171 483 4.45e-63 223
Msa1341250 AT5G27630.4 35.503 338 190 4 81 415 171 483 5.10e-63 223
Msa1341250 AT5G04420.2 32.955 352 203 3 80 422 20 347 5.24e-57 203
Msa1341250 AT5G04420.1 32.955 352 203 3 80 422 20 347 5.24e-57 203
Msa1341250 AT5G04420.3 32.955 352 203 3 80 422 20 347 5.24e-57 203
Msa1341250 AT1G18610.1 29.961 257 148 6 82 334 65 293 2.60e-26 114
Msa1341250 AT1G18610.1 24.179 335 205 10 83 405 13 310 1.74e-16 84.0
Msa1341250 AT1G18610.1 25.207 242 139 8 79 310 112 321 5.29e-14 75.9
Msa1341250 AT1G18610.2 29.961 257 148 6 82 334 65 293 2.60e-26 114
Msa1341250 AT1G18610.2 24.179 335 205 10 83 405 13 310 1.74e-16 84.0
Msa1341250 AT1G18610.2 25.207 242 139 8 79 310 112 321 5.29e-14 75.9
Msa1341250 AT1G74150.4 27.333 300 181 7 58 350 22 291 9.19e-24 106
Msa1341250 AT1G74150.1 27.899 276 162 7 82 350 62 307 1.25e-23 106
Msa1341250 AT1G74150.1 38.971 136 75 3 201 330 48 181 3.29e-17 86.3
Msa1341250 AT1G74150.1 27.468 233 145 9 225 441 19 243 5.25e-16 82.4
Msa1341250 AT1G74150.2 27.899 276 162 7 82 350 62 307 1.33e-23 106
Msa1341250 AT1G74150.2 38.971 136 75 3 201 330 48 181 3.30e-17 86.3
Msa1341250 AT1G74150.2 27.468 233 145 9 225 441 19 243 5.36e-16 82.4
Msa1341250 AT1G74150.3 27.899 276 162 7 82 350 62 307 1.36e-23 106
Msa1341250 AT1G74150.3 38.971 136 75 3 201 330 48 181 3.32e-17 86.3
Msa1341250 AT1G74150.3 27.468 233 145 9 225 441 19 243 5.30e-16 82.4
Msa1341250 AT4G04670.1 25.287 261 159 6 90 349 320 545 1.81e-17 87.8
Msa1341250 AT4G04670.1 23.729 236 147 4 139 367 304 513 1.61e-11 68.6
Msa1341250 AT4G04670.1 26.846 149 108 1 225 373 322 469 8.23e-11 66.2
Msa1341250 AT3G07720.1 30.588 170 102 4 205 367 52 212 2.14e-17 84.7
Msa1341250 AT3G07720.1 27.885 208 142 6 215 420 10 211 1.73e-13 72.8
Msa1341250 AT2G36360.2 25.806 310 174 11 81 367 3 279 3.70e-17 85.5
Msa1341250 AT2G36360.2 32.121 165 99 6 222 375 14 176 1.56e-14 77.4
Msa1341250 AT2G36360.2 31.092 238 128 10 81 310 113 322 5.67e-12 69.3
Msa1341250 AT2G36360.1 25.806 310 174 11 81 367 3 279 3.70e-17 85.5
Msa1341250 AT2G36360.1 32.121 165 99 6 222 375 14 176 1.56e-14 77.4
Msa1341250 AT2G36360.1 31.092 238 128 10 81 310 113 322 5.67e-12 69.3
Msa1341250 AT2G36360.3 25.806 310 174 11 81 367 3 279 5.06e-17 85.1
Msa1341250 AT2G36360.3 32.121 165 99 6 222 375 14 176 1.82e-14 77.4
Msa1341250 AT2G36360.3 31.092 238 128 10 81 310 113 322 6.18e-12 69.3
Msa1341250 AT2G36360.4 25.806 310 174 11 81 367 3 279 6.57e-17 85.1
Msa1341250 AT2G36360.4 32.121 165 99 6 222 375 14 176 2.35e-14 77.0
Msa1341250 AT2G36360.4 31.092 238 128 10 81 310 113 322 7.69e-12 68.9
Msa1341250 AT2G36360.5 25.806 310 183 12 81 367 3 288 2.51e-16 83.2
Msa1341250 AT1G74150.6 33.333 141 88 3 215 350 2 141 2.89e-15 79.0
Msa1341250 AT1G74150.5 33.333 141 88 3 215 350 2 141 2.89e-15 79.0
Msa1341250 AT3G16410.1 28.492 179 126 2 215 392 302 479 5.27e-13 72.8
Msa1341250 AT3G16410.1 24.436 266 168 5 82 347 302 534 1.20e-11 68.6
Msa1341250 AT1G03445.1 25.743 202 125 5 151 339 30 219 1.67e-12 71.6
Msa1341250 AT3G16400.2 29.050 179 125 2 215 392 153 330 1.70e-12 70.9
Msa1341250 AT3G16400.2 23.684 266 170 5 82 347 153 385 2.52e-11 67.0
Msa1341250 AT3G16400.1 29.050 179 125 2 215 392 153 330 1.70e-12 70.9
Msa1341250 AT3G16400.1 23.684 266 170 5 82 347 153 385 2.52e-11 67.0
Msa1341250 AT1G03445.2 25.743 202 125 5 151 339 30 219 2.32e-12 71.2
Msa1341250 AT2G33070.1 28.492 179 126 2 215 392 154 331 6.41e-12 68.9
Msa1341250 AT2G33070.1 23.308 266 171 5 82 347 154 386 4.20e-11 66.6
Msa1341250 AT2G33070.2 28.492 179 126 2 215 392 154 331 6.41e-12 68.9
Msa1341250 AT2G33070.2 23.308 266 171 5 82 347 154 386 4.20e-11 66.6
Msa1341250 AT5G50310.1 30.178 169 101 6 206 359 159 325 2.32e-11 67.8
Msa1341250 AT5G50310.1 28.054 221 126 10 205 402 103 313 7.05e-11 66.2
Msa1341250 AT2G33070.3 28.249 177 125 2 217 392 158 333 2.52e-11 67.0
Msa1341250 AT5G48180.1 26.852 216 123 10 205 407 50 243 5.57e-11 65.1

Find 202 sgRNAs with CRISPR-Local

Find 491 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGTATTGTTGTCAATTTC+TGG 0.133127 tig0004809:-10542 Msa1341250:CDS
CCTTGCATGCAGGAATCTTT+AGG 0.146868 tig0004809:+10067 None:intergenic
TAGAAATTACCTTCCGAATT+TGG 0.154916 tig0004809:+10938 None:intergenic
GATAAAGTTCTTTATATATT+TGG 0.156026 tig0004809:-8516 Msa1341250:CDS
AAGTGAATATAAATCATTTA+AGG 0.191129 tig0004809:+8473 None:intergenic
ATTACATTGAGAATGGAATT+TGG 0.204283 tig0004809:+10779 None:intergenic
AGCTCTTATTTGATATTGTT+TGG 0.210664 tig0004809:-8792 Msa1341250:CDS
TGTAAACTTCAGAATCTTCT+AGG 0.211311 tig0004809:-11081 Msa1341250:intron
CCCGGAAGTGACAGAATTTC+AGG 0.221004 tig0004809:-9485 Msa1341250:CDS
ATATAAATCATTTAAGGTTT+TGG 0.224898 tig0004809:+8479 None:intergenic
CCAGGTATCTTATGGGAAAA+AGG 0.239592 tig0004809:-9534 Msa1341250:intron
ATAAGTTGTTGGCCTCTTCT+TGG 0.244634 tig0004809:+5030 None:intergenic
GCTCTTATTTGATATTGTTT+GGG 0.245557 tig0004809:-8791 Msa1341250:CDS
TAGCATGCCGCTGCTGTTAT+TGG 0.270408 tig0004809:-10349 Msa1341250:CDS
AAGACTACCTTGTTGCATTT+GGG 0.272272 tig0004809:-6437 Msa1341250:CDS
TATAGATGCAGGACCTTTAC+TGG 0.281962 tig0004809:+6257 None:intergenic
AAAGACTACCTTGTTGCATT+TGG 0.288100 tig0004809:-6438 Msa1341250:CDS
GTAAAGTAGCAGCCCTAATA+AGG 0.302289 tig0004809:-5223 Msa1341250:CDS
CAAACAGAGATTGCAATCTA+TGG 0.305635 tig0004809:-4570 Msa1341250:CDS
ACCTGAAATTCTGTCACTTC+CGG 0.311291 tig0004809:+9484 None:intergenic
CTTGCATGCAGGAATCTTTA+GGG 0.318925 tig0004809:+10068 None:intergenic
CGTGCAGTGAAGTAGATAAT+TGG 0.321646 tig0004809:-4510 Msa1341250:exon
TCTCGTAGACGCACCAAATT+CGG 0.323781 tig0004809:-10951 Msa1341250:CDS
GGATAATGTTTACCAAACTA+TGG 0.327359 tig0004809:+10043 None:intergenic
CCTGAAATTCTGTCACTTCC+GGG 0.334087 tig0004809:+9485 None:intergenic
GCTCAGGCGGTTCCGAGAAT+TGG 0.334965 tig0004809:-10562 Msa1341250:CDS
AATCTTTAGGGGCAGACTAC+TGG 0.343382 tig0004809:+10080 None:intergenic
CTACTTCACTGCACGTGAAA+TGG 0.348878 tig0004809:+4518 None:intergenic
CCATAAAAGCAGACAGGAAA+TGG 0.356365 tig0004809:-5123 Msa1341250:CDS
TAAGTTGTTGGCCTCTTCTT+GGG 0.360114 tig0004809:+5031 None:intergenic
AATGGAATTTGGAATTCGTT+TGG 0.360327 tig0004809:+10790 None:intergenic
GGTACTAAATGGTATATTAC+AGG 0.362413 tig0004809:-7890 Msa1341250:CDS
TTGGGATGCCTAACAGTAAC+TGG 0.362709 tig0004809:+10809 None:intergenic
CATTATCAATTTCATGAGAA+TGG 0.366750 tig0004809:+10618 None:intergenic
CTGCACGTGAAATGGTTTCC+TGG 0.376171 tig0004809:+4526 None:intergenic
CTACTTTACTTTCATAGTAT+TGG 0.380126 tig0004809:+5237 None:intergenic
TTAATTAATTACATTGAGAA+TGG 0.381803 tig0004809:+10772 None:intergenic
TCAAAGCTGTTTGTAGAGTA+AGG 0.387921 tig0004809:+11007 None:intergenic
TCTGCAGTTGAACATGGTTC+TGG 0.388697 tig0004809:-6138 Msa1341250:CDS
GTTGCTACATGGTTCAATCT+TGG 0.394586 tig0004809:+8549 None:intergenic
TCAGGTGGAAGTGTTGGAAT+TGG 0.395673 tig0004809:-6316 Msa1341250:intron
ATGGAATTTGGAATTCGTTT+GGG 0.396792 tig0004809:+10791 None:intergenic
CTCTCTGTCTCTGTTTATCC+AGG 0.401604 tig0004809:-11420 Msa1341250:five_prime_UTR
TGCATGCAAGGGCCATAGTT+TGG 0.402210 tig0004809:-10055 Msa1341250:intron
GATCCTGATTTATCATTCTC+AGG 0.407816 tig0004809:+5281 None:intergenic
GAAGATGGGGATGCAGTTAC+CGG 0.409349 tig0004809:-10650 Msa1341250:CDS
ACTTCTTAATATGTTATTAG+TGG 0.410388 tig0004809:+4320 None:intergenic
AGCATGCCGCTGCTGTTATT+GGG 0.410438 tig0004809:-10348 Msa1341250:CDS
GTGCATCACTTTCAAATACT+TGG 0.411735 tig0004809:+5327 None:intergenic
TTTCCTGAGAATGATAAATC+AGG 0.412257 tig0004809:-5284 Msa1341250:CDS
GACACAGAATAAAATAATAA+TGG 0.413226 tig0004809:+11297 None:intergenic
GGCCGATGCATTGAAGGAAA+TGG 0.413822 tig0004809:-5090 Msa1341250:CDS
AGTTGTAAAGTGAAGATGTT+TGG 0.415894 tig0004809:-10978 Msa1341250:exon
CTCAGGCGGTTCCGAGAATT+GGG 0.419891 tig0004809:-10561 Msa1341250:CDS
GCAATGGTCACAGTGTTGTC+AGG 0.422481 tig0004809:-8818 Msa1341250:CDS
TGGAATGTTGGAGGGTCAAC+TGG 0.425176 tig0004809:-5195 Msa1341250:CDS
TGCAGCTTCTCTGCTTGCCA+TGG 0.428507 tig0004809:+5166 None:intergenic
AGGGAGAAGGAGAAGAAGAT+GGG 0.429455 tig0004809:-10664 Msa1341250:CDS
ACTGCTGCTTCGGTTCAAGC+TGG 0.430933 tig0004809:-11181 Msa1341250:five_prime_UTR
CAGGGAGAAGGAGAAGAAGA+TGG 0.431384 tig0004809:-10665 Msa1341250:CDS
GAATAGAAGTACTGCTGCTT+CGG 0.431494 tig0004809:-11191 Msa1341250:five_prime_UTR
GAAGGACAAGTGTTGTTGTC+CGG 0.435488 tig0004809:-5368 Msa1341250:CDS
GACTTATCAGGTGGAAGTGT+TGG 0.441862 tig0004809:-6322 Msa1341250:intron
AATACACTGTTACTAATTGA+AGG 0.447013 tig0004809:+4351 None:intergenic
CTAGAAGTCCAGTTACTGTT+AGG 0.451050 tig0004809:-10817 Msa1341250:CDS
AGCAGAGAAGCTGCAGAGAA+AGG 0.455687 tig0004809:-5158 Msa1341250:CDS
TGACAACAATACCCAATTCT+CGG 0.457202 tig0004809:+10550 None:intergenic
CGTAAACTGATGAACATTAG+TGG 0.459962 tig0004809:-5407 Msa1341250:CDS
CTCTTATTTGATATTGTTTG+GGG 0.460011 tig0004809:-8790 Msa1341250:CDS
GAGATGTATACATTGAATCT+AGG 0.462702 tig0004809:+10506 None:intergenic
TGAGCTACAAGTACTGATAT+TGG 0.463782 tig0004809:+10580 None:intergenic
AAAATTGGCCGATGCATTGA+AGG 0.464098 tig0004809:-5096 Msa1341250:CDS
GGTGATGGTACTGCTGGTCC+TGG 0.464502 tig0004809:+11402 None:intergenic
GTTGTAAAGTGAAGATGTTT+GGG 0.464609 tig0004809:-10977 Msa1341250:exon
AAAAGGAATGAGCACCTTGT+TGG 0.466619 tig0004809:+7193 None:intergenic
TTACGAAGGGAGACATTGCT+TGG 0.466763 tig0004809:+6075 None:intergenic
GGGTCAACTGGCAGCTTCCA+TGG 0.467509 tig0004809:-5183 Msa1341250:CDS
CCTAAAGATTCCTGCATGCA+AGG 0.471695 tig0004809:-10067 Msa1341250:CDS
TTGTTGTTGTCTTAGATTGA+AGG 0.472704 tig0004809:-10861 Msa1341250:intron
ATGAGAATGGCCACTTGAGC+CGG 0.473523 tig0004809:+10631 None:intergenic
TTGTCCACTCTGACAACGTT+CGG 0.473655 tig0004809:-5001 Msa1341250:CDS
TACGAAGGGAGACATTGCTT+GGG 0.475811 tig0004809:+6076 None:intergenic
TTCCATTTCCTTCAATGCAT+CGG 0.477323 tig0004809:+5088 None:intergenic
ATCTTTAGGGGCAGACTACT+GGG 0.480997 tig0004809:+10081 None:intergenic
AACATAGAGTAATTAAATGT+GGG 0.483555 tig0004809:+11264 None:intergenic
GATGTAGCCGTACCTGTAGT+TGG 0.486165 tig0004809:+4796 None:intergenic
AAGGACAAGTGTTGTTGTCC+GGG 0.487114 tig0004809:-5367 Msa1341250:CDS
TTGATCTCAAGTCGTTGACT+TGG 0.492787 tig0004809:-8725 Msa1341250:CDS
TCGACACGAGGAGTTATTGC+AGG 0.493083 tig0004809:-4837 Msa1341250:CDS
AACAGAGTCAACTAAGCGTT+GGG 0.493230 tig0004809:+6179 None:intergenic
TTTACCTCATTTCAGGGAGA+AGG 0.493393 tig0004809:-10677 Msa1341250:intron
AGAGTAATTAAATGTGGGGC+AGG 0.494334 tig0004809:+11269 None:intergenic
ATATTCACTTGACTTTGAAA+CGG 0.495952 tig0004809:-8460 Msa1341250:intron
GAATTACCAGGGTTTCAGCT+TGG 0.497187 tig0004809:-6481 Msa1341250:intron
CATCATAGAGAGTTGCTACA+TGG 0.497357 tig0004809:+8538 None:intergenic
GTAAACTTCAGAATCTTCTA+GGG 0.497740 tig0004809:-11080 Msa1341250:intron
AAAGTTCTTTATATATTTGG+AGG 0.498508 tig0004809:-8513 Msa1341250:CDS
GACAATGTTTGATAAGTTGT+TGG 0.502003 tig0004809:+5019 None:intergenic
AGATGGAAGTTCTTTACCTC+AGG 0.503667 tig0004809:-5998 Msa1341250:intron
GGAGCCAAGGTTAATATTGA+AGG 0.505831 tig0004809:-5386 Msa1341250:CDS
CTTGGTGCTTGTGCAATACA+AGG 0.512632 tig0004809:-6463 Msa1341250:CDS
AATATCAGTACTTGTAGCTC+AGG 0.512794 tig0004809:-10578 Msa1341250:CDS
TTATTGCAGGGGAAAGAGCT+AGG 0.513791 tig0004809:-4824 Msa1341250:CDS
AAGTGAGTGCTGGTCACTCA+TGG 0.520749 tig0004809:-9372 Msa1341250:CDS
TTCCATCCATCACCTAGAGC+TGG 0.522075 tig0004809:-7932 Msa1341250:CDS
CTGGTCACTCATGGAGGCAA+AGG 0.527028 tig0004809:-9363 Msa1341250:CDS
GTAATTGGGATCTATAGATT+CGG 0.527362 tig0004809:+6101 None:intergenic
ATCACTTACGTGTAGTGAAG+TGG 0.527387 tig0004809:+8699 None:intergenic
GTTGGCGGTGAGTCTGCTAC+TGG 0.528913 tig0004809:-10310 Msa1341250:CDS
TCTATTAACGTGAGCTGAGG+TGG 0.529972 tig0004809:-4256 Msa1341250:three_prime_UTR
CAACAGAGTCAACTAAGCGT+TGG 0.530123 tig0004809:+6178 None:intergenic
GGAGGCAAAGGGAGACATAC+CGG 0.532282 tig0004809:-9351 Msa1341250:intron
CGCGATCAAATTGCTTACGA+AGG 0.532290 tig0004809:+6061 None:intergenic
CTGAAGCAAGCAAGCAAGCA+AGG 0.533769 tig0004809:+11213 None:intergenic
TCTTGATAGGTTGCTCGCAA+TGG 0.536277 tig0004809:-8834 Msa1341250:intron
ATCGATTCGAACGTTACGTT+AGG 0.536783 tig0004809:+11445 None:intergenic
GCATGACGTGGCCTTCCTCA+AGG 0.542257 tig0004809:-4973 Msa1341250:CDS
TCTGATTAGTGTAGATAATG+AGG 0.542929 tig0004809:-4433 Msa1341250:three_prime_UTR
ATCTGTCCATAAAAGCAGAC+AGG 0.543682 tig0004809:-5129 Msa1341250:CDS
AAACTATGGCCCTTGCATGC+AGG 0.544560 tig0004809:+10057 None:intergenic
TGCACGTGAAATGGTTTCCT+GGG 0.544565 tig0004809:+4527 None:intergenic
AGCTAGGGCATTCCAACTAC+AGG 0.545831 tig0004809:-4808 Msa1341250:intron
AAGGTTCAGCAGCTTTCTGA+TGG 0.547869 tig0004809:-10842 Msa1341250:CDS
GACTACCTTGTTGCATTTGG+GGG 0.548558 tig0004809:-6435 Msa1341250:CDS
AGACGTTCAACTCCCAGTAA+AGG 0.548803 tig0004809:-6270 Msa1341250:CDS
AGACTACCTTGTTGCATTTG+GGG 0.550546 tig0004809:-6436 Msa1341250:CDS
CTGCTGCTTCGGTTCAAGCT+GGG 0.551961 tig0004809:-11180 Msa1341250:intron
CAAAGCTGTTTGTAGAGTAA+GGG 0.552495 tig0004809:+11008 None:intergenic
TCACCTAGAGCTGGTTGTTG+TGG 0.552879 tig0004809:-7923 Msa1341250:CDS
GGGAGAAGGAGAAGAAGATG+GGG 0.552987 tig0004809:-10663 Msa1341250:CDS
TAACATAGAGTAATTAAATG+TGG 0.553933 tig0004809:+11263 None:intergenic
TAATTACTCCTATTAGCTTG+AGG 0.554771 tig0004809:+11369 None:intergenic
TTCTTGGGCCAACTCTAGAC+CGG 0.555005 tig0004809:+5046 None:intergenic
GATGCAGTTACCGGCTCAAG+TGG 0.556942 tig0004809:-10641 Msa1341250:CDS
TTGTCCTTCAATATTAACCT+TGG 0.557383 tig0004809:+5382 None:intergenic
CTTTGTCAAACCTGATTAGA+CGG 0.559990 tig0004809:+6399 None:intergenic
AAGATGGACAAGAACTCAGA+TGG 0.560785 tig0004809:-6015 Msa1341250:CDS
TTGTTGGTAGTGATAGAAGA+TGG 0.561523 tig0004809:+7209 None:intergenic
ACGCCACAACAACCAGCTCT+AGG 0.562219 tig0004809:+7920 None:intergenic
GGGAATAAGATCATAGTGGT+TGG 0.563677 tig0004809:-10328 Msa1341250:CDS
GAAGCTAGCCGGTCTAGAGT+TGG 0.567033 tig0004809:-5054 Msa1341250:CDS
TGGTCAAGAGTAAAGGTTCG+AGG 0.567595 tig0004809:-7956 Msa1341250:CDS
GATGGCATGGTCAAGAGTAA+AGG 0.568782 tig0004809:-7963 Msa1341250:CDS
AACCAGCTCTAGGTGATGGA+TGG 0.570411 tig0004809:+7930 None:intergenic
GAAGGGAGACATTGCTTGGG+GGG 0.571244 tig0004809:+6079 None:intergenic
TATACATTGAATCTAGGAGC+GGG 0.571927 tig0004809:+10512 None:intergenic
TCTAGAGTTGGCCCAAGAAG+AGG 0.572395 tig0004809:-5042 Msa1341250:CDS
ATTGGAGGGAAAACAGATCC+CGG 0.572579 tig0004809:-9503 Msa1341250:CDS
GAAGGATAGATAGAACTAAG+AGG 0.573056 tig0004809:+4369 None:intergenic
CTAAAGATTCCTGCATGCAA+GGG 0.575942 tig0004809:-10066 Msa1341250:CDS
TGGATTGTTAGATGATGTGC+AGG 0.577622 tig0004809:-10290 Msa1341250:intron
TTACTCCTATTAGCTTGAGG+TGG 0.583113 tig0004809:+11372 None:intergenic
CAACAACCAGCTCTAGGTGA+TGG 0.583967 tig0004809:+7926 None:intergenic
ATCTAAAACAGCCTTGAGGA+AGG 0.584324 tig0004809:+4962 None:intergenic
CGACACGAGGAGTTATTGCA+GGG 0.588443 tig0004809:-4836 Msa1341250:CDS
TGGTCACTCATGGAGGCAAA+GGG 0.590172 tig0004809:-9362 Msa1341250:CDS
TTGATACAGAAAGTGAGTGC+TGG 0.592237 tig0004809:-9382 Msa1341250:CDS
CAATGGTCACAGTGTTGTCA+GGG 0.593372 tig0004809:-8817 Msa1341250:CDS
GTAAAGCTTTGATGTTGCCA+TGG 0.593853 tig0004809:+10110 None:intergenic
ACATGGTTCAATCTTGGAGA+AGG 0.593948 tig0004809:+8555 None:intergenic
TTAGCATCTGCAGTTGAACA+TGG 0.594598 tig0004809:-6144 Msa1341250:CDS
TATTGGGAATAAGATCATAG+TGG 0.595128 tig0004809:-10332 Msa1341250:CDS
GTACTAAATGGTATATTACA+GGG 0.598606 tig0004809:-7889 Msa1341250:CDS
GATGAACATTAGTGGAGCCA+AGG 0.598955 tig0004809:-5399 Msa1341250:CDS
ATTCGAACGTTACGTTAGGT+AGG 0.605733 tig0004809:+11449 None:intergenic
TTACTGCGAGAGAAGCTAGC+CGG 0.609620 tig0004809:-5065 Msa1341250:CDS
TTGCATGCAGGAATCTTTAG+GGG 0.610352 tig0004809:+10069 None:intergenic
ATACAATGCAGATGTCAAGA+TGG 0.612562 tig0004809:-6031 Msa1341250:CDS
ATCAGTACTTGTAGCTCAGG+CGG 0.612630 tig0004809:-10575 Msa1341250:CDS
AAGCTGAGAGGCTAATCTAG+TGG 0.613975 tig0004809:+6212 None:intergenic
AATAAGATCATAGTGGTTGG+CGG 0.614289 tig0004809:-10325 Msa1341250:CDS
GCGATCAAATTGCTTACGAA+GGG 0.614392 tig0004809:+6062 None:intergenic
AAAAGGCACTTCTCATTGGA+GGG 0.617797 tig0004809:-9517 Msa1341250:CDS
ATAGATGCAGGACCTTTACT+GGG 0.619077 tig0004809:+6258 None:intergenic
CGAAGGGAGACATTGCTTGG+GGG 0.620540 tig0004809:+6078 None:intergenic
TATTGCAGGGGAAAGAGCTA+GGG 0.628345 tig0004809:-4823 Msa1341250:CDS
CTGTCTATTAACGTGAGCTG+AGG 0.628586 tig0004809:-4259 Msa1341250:three_prime_UTR
ACGAAGGGAGACATTGCTTG+GGG 0.632300 tig0004809:+6077 None:intergenic
CAGTTGAACATGGTTCTGGA+AGG 0.632339 tig0004809:-6134 Msa1341250:CDS
ACAGAATAAAATAATAATGG+TGG 0.633432 tig0004809:+11300 None:intergenic
CGAGCCGAACGTTGTCAGAG+TGG 0.638950 tig0004809:+4997 None:intergenic
ACGTTAGGTAGGTAGCAAGA+TGG 0.644922 tig0004809:+11460 None:intergenic
CTTATTCCCAATAACAGCAG+CGG 0.650581 tig0004809:+10342 None:intergenic
CGTTCGGCTCGAGCATGACG+TGG 0.650902 tig0004809:-4985 Msa1341250:CDS
TCTTATTTGATATTGTTTGG+GGG 0.654743 tig0004809:-8789 Msa1341250:CDS
TAGGAGTTGCACTCGACACG+AGG 0.657321 tig0004809:-4849 Msa1341250:CDS
ATCGAACTTCTACTACACCC+AGG 0.658471 tig0004809:-4544 Msa1341250:CDS
ATCTTCTATCACTACCAACA+AGG 0.664353 tig0004809:-7207 Msa1341250:intron
ACATAGAGTAATTAAATGTG+GGG 0.664772 tig0004809:+11265 None:intergenic
GTATACATTGAATCTAGGAG+CGG 0.665030 tig0004809:+10511 None:intergenic
TTGGTAGTGATAGAAGATGG+AGG 0.668670 tig0004809:+7212 None:intergenic
GATTAGTGTAGATAATGAGG+AGG 0.671629 tig0004809:-4430 Msa1341250:three_prime_UTR
CTGGATAAACAGAGACAGAG+AGG 0.674018 tig0004809:+11421 None:intergenic
TACTAAATGGTATATTACAG+GGG 0.679666 tig0004809:-7888 Msa1341250:CDS
GTAGACGCACCAAATTCGGA+AGG 0.687181 tig0004809:-10947 Msa1341250:intron
TGAGTGCTGGTCACTCATGG+AGG 0.691926 tig0004809:-9369 Msa1341250:CDS
AGTGATGCACTAGAAAGTGA+AGG 0.692132 tig0004809:-5314 Msa1341250:CDS
TATCATCTAAAACAGCCTTG+AGG 0.698493 tig0004809:+4958 None:intergenic
ACTAAATGGTATATTACAGG+GGG 0.704681 tig0004809:-7887 Msa1341250:CDS
TAATGTTCATCAGTTTACGA+CGG 0.715221 tig0004809:+5411 None:intergenic
GGAACAGTGATTAAGCTGAG+AGG 0.722001 tig0004809:+6200 None:intergenic
GACACGAGGAGTTATTGCAG+GGG 0.745141 tig0004809:-4835 Msa1341250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATCATTCAAATATTTT+GGG - tig0004809:8079-8098 Msa1341250:intron 10.0%
!!! AAATAATATTGTTATTACTA+AGG + tig0004809:9148-9167 None:intergenic 10.0%
!! AATTAAAGACAAAACAAAAT+TGG + tig0004809:4568-4587 None:intergenic 15.0%
!! TTAATTAATTACATTGAGAA+TGG + tig0004809:4937-4956 None:intergenic 15.0%
!!! ACTAATTGTTATTGTAAAAT+TGG - tig0004809:4987-5006 Msa1341250:CDS 15.0%
!!! TAATTTTCTCTTATATAACT+TGG + tig0004809:5917-5936 None:intergenic 15.0%
!! AAAATTAAAAGAAAATGACT+GGG - tig0004809:5930-5949 Msa1341250:intron 15.0%
!!! ACATTTTAAAAAAGTTAACT+AGG - tig0004809:6556-6575 Msa1341250:intron 15.0%
!!! ATTTGAATTTTGAAAAGAAA+AGG - tig0004809:7051-7070 Msa1341250:intron 15.0%
!! GATAAAGTTCTTTATATATT+TGG - tig0004809:7190-7209 Msa1341250:intron 15.0%
!!! ATATAAATCATTTAAGGTTT+TGG + tig0004809:7230-7249 None:intergenic 15.0%
!! AAGTGAATATAAATCATTTA+AGG + tig0004809:7236-7255 None:intergenic 15.0%
!! ATCAAATAATATATAGTGAA+GGG + tig0004809:7699-7718 None:intergenic 15.0%
!! TATCAAATAATATATAGTGA+AGG + tig0004809:7700-7719 None:intergenic 15.0%
!! TATTTGAATGATTAAAGAAA+TGG + tig0004809:8075-8094 None:intergenic 15.0%
!!! CTTTAATCATTCAAATATTT+TGG - tig0004809:8078-8097 Msa1341250:intron 15.0%
!!! TGGAGAAATAATATTTTTAA+AGG - tig0004809:8130-8149 Msa1341250:intron 15.0%
!! TTACCAAAAAAAGATATTAT+TGG - tig0004809:8255-8274 Msa1341250:intron 15.0%
!! TACCAAAAAAAGATATTATT+GGG - tig0004809:8256-8275 Msa1341250:intron 15.0%
!! AAAATCTACTTCAATAATAT+TGG + tig0004809:8331-8350 None:intergenic 15.0%
!! TTGATATTGTAAAAAATGAA+TGG - tig0004809:8453-8472 Msa1341250:intron 15.0%
!! ACAGAATAAAATAATAATGG+TGG + tig0004809:4409-4428 None:intergenic 20.0%
!! GACACAGAATAAAATAATAA+TGG + tig0004809:4412-4431 None:intergenic 20.0%
!! AACATAGAGTAATTAAATGT+GGG + tig0004809:4445-4464 None:intergenic 20.0%
!! TAACATAGAGTAATTAAATG+TGG + tig0004809:4446-4465 None:intergenic 20.0%
!! ACAATAACAATTAGTAAAGT+TGG + tig0004809:4982-5001 None:intergenic 20.0%
!!! TATGAGTTGAGAAATTTAAT+GGG + tig0004809:5793-5812 None:intergenic 20.0%
!!! TTATGAGTTGAGAAATTTAA+TGG + tig0004809:5794-5813 None:intergenic 20.0%
!! GAAAATTAAAAGAAAATGAC+TGG - tig0004809:5929-5948 Msa1341250:intron 20.0%
!! AAAGTTCTTTATATATTTGG+AGG - tig0004809:7193-7212 Msa1341250:intron 20.0%
!! TTGTATCTTTACTATATTAG+TGG - tig0004809:7295-7314 Msa1341250:intron 20.0%
!! TCAAATAATATATAGTGAAG+GGG + tig0004809:7698-7717 None:intergenic 20.0%
!!! TATTATTTCTCCAATTCTAA+AGG + tig0004809:8123-8142 None:intergenic 20.0%
!! TTTAAAGGAAAATTAGTTAC+AGG - tig0004809:8145-8164 Msa1341250:intron 20.0%
!! TTAAAGGAAAATTAGTTACA+GGG - tig0004809:8146-8165 Msa1341250:intron 20.0%
!!! TTGGGAAGTAAAATTTTATT+GGG - tig0004809:8229-8248 Msa1341250:intron 20.0%
!!! GATTTTATTTTAGTCAGTAT+TGG - tig0004809:8345-8364 Msa1341250:intron 20.0%
!! TTTGTTTATAAATTGTGCTA+TGG - tig0004809:8371-8390 Msa1341250:intron 20.0%
!! TTAGTTATTGTGTTAATTGA+TGG - tig0004809:8570-8589 Msa1341250:intron 20.0%
!! AACTAAAGAGTTATATTTGA+AGG + tig0004809:8644-8663 None:intergenic 20.0%
!! TTATTCATTTACTACAATAG+AGG - tig0004809:8678-8697 Msa1341250:intron 20.0%
!! ACATCATATTGTAAAAATGA+GGG + tig0004809:9052-9071 None:intergenic 20.0%
!! AACATCATATTGTAAAAATG+AGG + tig0004809:9053-9072 None:intergenic 20.0%
!! CTAACATCAATAAAGAAAAA+AGG + tig0004809:9741-9760 None:intergenic 20.0%
!! ACATGCATAAATATTAGATA+AGG - tig0004809:9897-9916 Msa1341250:intron 20.0%
!! ATGACCAAAAAAATGAAAAA+AGG - tig0004809:9980-9999 Msa1341250:intron 20.0%
!! GAATCCTATTAAAGAAAATA+CGG + tig0004809:10092-10111 None:intergenic 20.0%
!! ACTTCTTAATATGTTATTAG+TGG + tig0004809:11389-11408 None:intergenic 20.0%
! ACATAGAGTAATTAAATGTG+GGG + tig0004809:4444-4463 None:intergenic 25.0%
! ATTACATTGAGAATGGAATT+TGG + tig0004809:4930-4949 None:intergenic 25.0%
! CATTATCAATTTCATGAGAA+TGG + tig0004809:5091-5110 None:intergenic 25.0%
! TCAGATCAAACAATAATAGT+TGG + tig0004809:5241-5260 None:intergenic 25.0%
! ATAATGTGGTTATTCACATA+AGG + tig0004809:5827-5846 None:intergenic 25.0%
! TCACTAATTGATGAATAATG+TGG + tig0004809:5841-5860 None:intergenic 25.0%
! TGTGCATGATATAGATATTA+TGG - tig0004809:5861-5880 Msa1341250:intron 25.0%
! GTGCATGATATAGATATTAT+GGG - tig0004809:5862-5881 Msa1341250:intron 25.0%
!!! TAACGATTTTAACATGTTTG+GGG + tig0004809:5889-5908 None:intergenic 25.0%
!!! CTAACGATTTTAACATGTTT+GGG + tig0004809:5890-5909 None:intergenic 25.0%
!!! TCTAACGATTTTAACATGTT+TGG + tig0004809:5891-5910 None:intergenic 25.0%
!! TAATTTTACCAGGTATCTTA+TGG - tig0004809:6164-6183 Msa1341250:CDS 25.0%
!! AATTTTACCAGGTATCTTAT+GGG - tig0004809:6165-6184 Msa1341250:CDS 25.0%
!! ATATTTTTCACACATGACAA+AGG - tig0004809:6633-6652 Msa1341250:intron 25.0%
!! AGCTCTTATTTGATATTGTT+TGG - tig0004809:6914-6933 Msa1341250:intron 25.0%
!! GCTCTTATTTGATATTGTTT+GGG - tig0004809:6915-6934 Msa1341250:intron 25.0%
!! CTCTTATTTGATATTGTTTG+GGG - tig0004809:6916-6935 Msa1341250:intron 25.0%
!! TCTTATTTGATATTGTTTGG+GGG - tig0004809:6917-6936 Msa1341250:intron 25.0%
!!! GAATTTTGAAAAGAAAAGGT+TGG - tig0004809:7055-7074 Msa1341250:intron 25.0%
!! ATTCCTTTTGATCTACTATA+TGG - tig0004809:7111-7130 Msa1341250:intron 25.0%
! AATCCATATAGTAGATCAAA+AGG + tig0004809:7117-7136 None:intergenic 25.0%
!!! ATTTAAGGTTTTGGATTTTG+AGG + tig0004809:7221-7240 None:intergenic 25.0%
!! ATATTCACTTGACTTTGAAA+CGG - tig0004809:7246-7265 Msa1341250:CDS 25.0%
!! ATATGTTTCTTTTCTTCAGA+TGG - tig0004809:7725-7744 Msa1341250:intron 25.0%
! GTACTAAATGGTATATTACA+GGG - tig0004809:7817-7836 Msa1341250:intron 25.0%
! TACTAAATGGTATATTACAG+GGG - tig0004809:7818-7837 Msa1341250:intron 25.0%
!!! AAATAAAGAGCCTTTAGAAT+TGG - tig0004809:8110-8129 Msa1341250:intron 25.0%
!! GTTGGGAAGTAAAATTTTAT+TGG - tig0004809:8228-8247 Msa1341250:intron 25.0%
!!! GACCCAATAATATCTTTTTT+TGG + tig0004809:8261-8280 None:intergenic 25.0%
! TTACTAATAACATTACACCA+AGG + tig0004809:8708-8727 None:intergenic 25.0%
! TTGGTGTAATGTTATTAGTA+AGG - tig0004809:8707-8726 Msa1341250:intron 25.0%
! AGTAAATGAATGAAAAAGGT+CGG + tig0004809:8858-8877 None:intergenic 25.0%
! TTGCAGTAAATGAATGAAAA+AGG + tig0004809:8862-8881 None:intergenic 25.0%
! CATCATATTGTAAAAATGAG+GGG + tig0004809:9051-9070 None:intergenic 25.0%
!!! ATTTTGTTTCTTGACTTATC+AGG - tig0004809:9372-9391 Msa1341250:CDS 25.0%
!!! GAGACCTTTTTTCATTTTTT+TGG + tig0004809:9987-10006 None:intergenic 25.0%
! ATATCATCTCAAAAGAAACT+GGG + tig0004809:10144-10163 None:intergenic 25.0%
! AATATCATCTCAAAAGAAAC+TGG + tig0004809:10145-10164 None:intergenic 25.0%
! CTACTTTACTTTCATAGTAT+TGG + tig0004809:10472-10491 None:intergenic 25.0%
!!! CATTCCATTTTTCCTTATTA+GGG + tig0004809:10498-10517 None:intergenic 25.0%
!!! ACATTCCATTTTTCCTTATT+AGG + tig0004809:10499-10518 None:intergenic 25.0%
! AATAAGGAAAAATGGAATGT+TGG - tig0004809:10499-10518 Msa1341250:intron 25.0%
! AATACACTGTTACTAATTGA+AGG + tig0004809:11358-11377 None:intergenic 25.0%
! TAATTACTCCTATTAGCTTG+AGG + tig0004809:4340-4359 None:intergenic 30.0%
TGTAAACTTCAGAATCTTCT+AGG - tig0004809:4625-4644 Msa1341250:intron 30.0%
GTAAACTTCAGAATCTTCTA+GGG - tig0004809:4626-4645 Msa1341250:intron 30.0%
AGTTGTAAAGTGAAGATGTT+TGG - tig0004809:4728-4747 Msa1341250:intron 30.0%
GTTGTAAAGTGAAGATGTTT+GGG - tig0004809:4729-4748 Msa1341250:intron 30.0%
TAGAAATTACCTTCCGAATT+TGG + tig0004809:4771-4790 None:intergenic 30.0%
!! AATGAAGTGTTGCATTAATG+TGG + tig0004809:4817-4836 None:intergenic 30.0%
! TTGTTGTTGTCTTAGATTGA+AGG - tig0004809:4845-4864 Msa1341250:CDS 30.0%
! ATGGAATTTGGAATTCGTTT+GGG + tig0004809:4918-4937 None:intergenic 30.0%
! AATGGAATTTGGAATTCGTT+TGG + tig0004809:4919-4938 None:intergenic 30.0%
! TCAAGTTTTTACCTCATTTC+AGG - tig0004809:5022-5041 Msa1341250:CDS 30.0%
! CAAGTTTTTACCTCATTTCA+GGG - tig0004809:5023-5042 Msa1341250:CDS 30.0%
GAGATGTATACATTGAATCT+AGG + tig0004809:5203-5222 None:intergenic 30.0%
TATTGGGAATAAGATCATAG+TGG - tig0004809:5374-5393 Msa1341250:CDS 30.0%
TTAGTGTCAATGTGTAATTG+TGG + tig0004809:5481-5500 None:intergenic 30.0%
!! TGAATTTTGACACATTTTCG+TGG - tig0004809:5572-5591 Msa1341250:intron 30.0%
GGATAATGTTTACCAAACTA+TGG + tig0004809:5666-5685 None:intergenic 30.0%
!! GAGCTTTTTGTTATGGTAAT+TGG + tig0004809:5687-5706 None:intergenic 30.0%
TCGACAATGAGGAATAAAAT+TGG - tig0004809:6020-6039 Msa1341250:CDS 30.0%
! AGTTGATATTTATGTGTGTC+TGG - tig0004809:6112-6131 Msa1341250:CDS 30.0%
TACCTGGTAAAATTATCATC+AGG + tig0004809:6159-6178 None:intergenic 30.0%
! TGTTGCTCTGATTATCTTTT+TGG - tig0004809:6283-6302 Msa1341250:CDS 30.0%
CTACAAACAAAAATTCCTAC+CGG + tig0004809:6377-6396 None:intergenic 30.0%
TGGAAATAGAAATTGCTCTA+GGG - tig0004809:6415-6434 Msa1341250:CDS 30.0%
TGATATAAAGAACAACCACT+AGG - tig0004809:6458-6477 Msa1341250:CDS 30.0%
AGTTAACTAGGTTACAATTG+AGG - tig0004809:6568-6587 Msa1341250:intron 30.0%
! TTACAAAGCTTTTCATCTAC+TGG + tig0004809:6599-6618 None:intergenic 30.0%
! AGATGAAAAGCTTTGTAAGT+TGG - tig0004809:6601-6620 Msa1341250:intron 30.0%
!!! TCCATACTGATTTTGATACT+TGG - tig0004809:6805-6824 Msa1341250:intron 30.0%
TCCAAGTATCAAAATCAGTA+TGG + tig0004809:6809-6828 None:intergenic 30.0%
GAGCTTTACATCATATAACT+AGG - tig0004809:6827-6846 Msa1341250:intron 30.0%
GTAAAGATACAAGACATATG+AGG + tig0004809:7287-7306 None:intergenic 30.0%
TAGTGGTAGAATTCAGTAAA+TGG - tig0004809:7312-7331 Msa1341250:intron 30.0%
ATTCAGTAAATGGATGAAGA+AGG - tig0004809:7322-7341 Msa1341250:intron 30.0%
AAAACTATCGTATTAGCTAC+TGG - tig0004809:7350-7369 Msa1341250:intron 30.0%
AATATGGTTATGTGGAAAGA+GGG + tig0004809:7481-7500 None:intergenic 30.0%
ACTTAATCAATTCAGCATCT+CGG + tig0004809:7674-7693 None:intergenic 30.0%
GGTACTAAATGGTATATTAC+AGG - tig0004809:7816-7835 Msa1341250:intron 30.0%
ACTAAATGGTATATTACAGG+GGG - tig0004809:7819-7838 Msa1341250:intron 30.0%
! ACCTACTACTTTCTTTCTTT+TGG - tig0004809:7904-7923 Msa1341250:CDS 30.0%
ACCAAAAGAAAGAAAGTAGT+AGG + tig0004809:7908-7927 None:intergenic 30.0%
AACTACTACTTTCTTTCTCT+TGG - tig0004809:7928-7947 Msa1341250:CDS 30.0%
! TGTTGTTATGCTTCATTTTC+TGG - tig0004809:7964-7983 Msa1341250:CDS 30.0%
! GTTGTTATGCTTCATTTTCT+GGG - tig0004809:7965-7984 Msa1341250:CDS 30.0%
TGATCTGGCTAAAATTTAGT+TGG - tig0004809:8210-8229 Msa1341250:intron 30.0%
GATCTGGCTAAAATTTAGTT+GGG - tig0004809:8211-8230 Msa1341250:intron 30.0%
ATTGCTTAAACAAAGCCTTA+GGG - tig0004809:8288-8307 Msa1341250:intron 30.0%
TGTAAAAAATGAATGGTCTG+TGG - tig0004809:8460-8479 Msa1341250:intron 30.0%
ACAATAGTCAATAGACATGT+TGG + tig0004809:8967-8986 None:intergenic 30.0%
! AGTCTCATTTTCATAGTCAT+AGG + tig0004809:9093-9112 None:intergenic 30.0%
!! TTATTTCTAGATGTCTTGCA+TGG - tig0004809:9162-9181 Msa1341250:intron 30.0%
AGAGCATAAAGTTAATGTTC+TGG - tig0004809:9328-9347 Msa1341250:intron 30.0%
!! AATGTTCTGGTTCATTCTTA+TGG - tig0004809:9341-9360 Msa1341250:intron 30.0%
GTAATTGGGATCTATAGATT+CGG + tig0004809:9608-9627 None:intergenic 30.0%
!! TGCTTTAGAATGAGAATACA+CGG + tig0004809:9764-9783 None:intergenic 30.0%
!!! TGCCATGTGTTTTTAAAACA+TGG - tig0004809:9813-9832 Msa1341250:intron 30.0%
!!! CACCATGTTTTAAAAACACA+TGG + tig0004809:9818-9837 None:intergenic 30.0%
AAAACACTAGGATATGTACA+GGG + tig0004809:9859-9878 None:intergenic 30.0%
AAAAACACTAGGATATGTAC+AGG + tig0004809:9860-9879 None:intergenic 30.0%
GCATGTATATTCAAACATAG+CGG + tig0004809:9883-9902 None:intergenic 30.0%
!!! TTTTTTTGGTCATGAGATGT+GGG + tig0004809:9973-9992 None:intergenic 30.0%
!!! ATTTTTTTGGTCATGAGATG+TGG + tig0004809:9974-9993 None:intergenic 30.0%
TCCTATTAAAGAAAATACGG+CGG + tig0004809:10089-10108 None:intergenic 30.0%
! TTAATGTTCTGCGTAACTTT+TGG - tig0004809:10233-10252 Msa1341250:intron 30.0%
TAATGTTCATCAGTTTACGA+CGG + tig0004809:10298-10317 None:intergenic 30.0%
TTGTCCTTCAATATTAACCT+TGG + tig0004809:10327-10346 None:intergenic 30.0%
!!! GTTTTGTTGATTTGATATCC+CGG + tig0004809:10360-10379 None:intergenic 30.0%
TTTCCTGAGAATGATAAATC+AGG - tig0004809:10422-10441 Msa1341250:intron 30.0%
ACAGGAAATGGAGAAAAAAT+TGG - tig0004809:10595-10614 Msa1341250:CDS 30.0%
GACAATGTTTGATAAGTTGT+TGG + tig0004809:10690-10709 None:intergenic 30.0%
!! TGTTTTAGATGATACACAGA+AGG - tig0004809:10757-10776 Msa1341250:intron 30.0%
GAGTGCTTCAAATGAATAAT+GGG + tig0004809:10792-10811 None:intergenic 30.0%
! AGAGTGCTTCAAATGAATAA+TGG + tig0004809:10793-10812 None:intergenic 30.0%
! CTTTTATGCATGGTTATTGT+TGG - tig0004809:10817-10836 Msa1341250:CDS 30.0%
!! GGCTGATAAAATTTTGTTGT+AGG - tig0004809:10838-10857 Msa1341250:CDS 30.0%
! CAGATTGTGTTTGAGTTTAT+TGG - tig0004809:10985-11004 Msa1341250:exon 30.0%
TCTGATTAGTGTAGATAATG+AGG - tig0004809:11273-11292 Msa1341250:five_prime_UTR 30.0%
! TTAGCTTGAGGTGGAAAAAA+TGG + tig0004809:4328-4347 None:intergenic 35.0%
! TTTTTCCACCTCAAGCTAAT+AGG - tig0004809:4329-4348 Msa1341250:three_prime_UTR 35.0%
CAAAGCTGTTTGTAGAGTAA+GGG + tig0004809:4701-4720 None:intergenic 35.0%
TCAAAGCTGTTTGTAGAGTA+AGG + tig0004809:4702-4721 None:intergenic 35.0%
AGTTGGAAGATGAGAAAGAA+AGG + tig0004809:4965-4984 None:intergenic 35.0%
!! TGAGCTACAAGTACTGATAT+TGG + tig0004809:5129-5148 None:intergenic 35.0%
AATATCAGTACTTGTAGCTC+AGG - tig0004809:5128-5147 Msa1341250:CDS 35.0%
TGACAACAATACCCAATTCT+CGG + tig0004809:5159-5178 None:intergenic 35.0%
! TGGGTATTGTTGTCAATTTC+TGG - tig0004809:5164-5183 Msa1341250:CDS 35.0%
TATACATTGAATCTAGGAGC+GGG + tig0004809:5197-5216 None:intergenic 35.0%
GTATACATTGAATCTAGGAG+CGG + tig0004809:5198-5217 None:intergenic 35.0%
AATAAGATCATAGTGGTTGG+CGG - tig0004809:5381-5400 Msa1341250:CDS 35.0%
AATTGTGGACGGTTCTATAT+TGG + tig0004809:5466-5485 None:intergenic 35.0%
TGTCAATGTGTAATTGTGGA+CGG + tig0004809:5477-5496 None:intergenic 35.0%
!!! GTCACATCACAGTTTTAGAA+AGG + tig0004809:5514-5533 None:intergenic 35.0%
! TCTAAAACTGTGATGTGACA+TGG - tig0004809:5515-5534 Msa1341250:intron 35.0%
! TGCTTTTCGTTTTCATTCTC+AGG - tig0004809:5546-5565 Msa1341250:intron 35.0%
! AAGAGGAGAGCTTTTTGTTA+TGG + tig0004809:5694-5713 None:intergenic 35.0%
! TAAGGGTACATTGAAACAAG+AGG + tig0004809:5711-5730 None:intergenic 35.0%
AAGGTTAACAAAAGTCAACC+AGG - tig0004809:5969-5988 Msa1341250:intron 35.0%
ACAAAAGTCAACCAGGAATA+TGG - tig0004809:5976-5995 Msa1341250:intron 35.0%
CAAATATGAACTCGACAATG+AGG - tig0004809:6009-6028 Msa1341250:CDS 35.0%
! TGAGGAATAAAATTGGTGTC+AGG - tig0004809:6027-6046 Msa1341250:CDS 35.0%
!! GAGGAATAAAATTGGTGTCA+GGG - tig0004809:6028-6047 Msa1341250:CDS 35.0%
!! AGGAATAAAATTGGTGTCAG+GGG - tig0004809:6029-6048 Msa1341250:CDS 35.0%
! TGCCTGATGATAATTTTACC+AGG - tig0004809:6154-6173 Msa1341250:CDS 35.0%
!!! TCTTTTTGGTGTTTGCAGTA+TGG - tig0004809:6297-6316 Msa1341250:CDS 35.0%
!!! CTTTTTGGTGTTTGCAGTAT+GGG - tig0004809:6298-6317 Msa1341250:CDS 35.0%
GTGGAAATAGAAATTGCTCT+AGG - tig0004809:6414-6433 Msa1341250:CDS 35.0%
TACACTAATACACTTCCTAG+TGG + tig0004809:6476-6495 None:intergenic 35.0%
CCTATCAAGAACAAACTCTT+TGG + tig0004809:6862-6881 None:intergenic 35.0%
! CCAAAGAGTTTGTTCTTGAT+AGG - tig0004809:6859-6878 Msa1341250:intron 35.0%
! TGATCTACTATATGGATTGC+AGG - tig0004809:7119-7138 Msa1341250:intron 35.0%
! GATCTACTATATGGATTGCA+GGG - tig0004809:7120-7139 Msa1341250:intron 35.0%
! ATCTACTATATGGATTGCAG+GGG - tig0004809:7121-7140 Msa1341250:intron 35.0%
! TTTGAAACGGTAAGTAGTGT+AGG - tig0004809:7259-7278 Msa1341250:CDS 35.0%
GTAAATGGATGAAGAAGGAA+TGG - tig0004809:7327-7346 Msa1341250:intron 35.0%
ATGTGGAAAGAGGGAATAAT+AGG + tig0004809:7472-7491 None:intergenic 35.0%
GAATATGGTTATGTGGAAAG+AGG + tig0004809:7482-7501 None:intergenic 35.0%
GTTTATGTAAGCAAAAGGAG+AGG + tig0004809:7563-7582 None:intergenic 35.0%
GGAAGGTTTATGTAAGCAAA+AGG + tig0004809:7568-7587 None:intergenic 35.0%
TTTGCTTACATAAACCTTCC+AGG - tig0004809:7568-7587 Msa1341250:intron 35.0%
! ATTTGATAGAGCACTAGATC+AGG + tig0004809:7624-7643 None:intergenic 35.0%
! TTTCTTTTCTTCAGATGGCA+TGG - tig0004809:7730-7749 Msa1341250:intron 35.0%
CAGCAGTAATAAAGTAGTTC+AGG + tig0004809:8009-8028 None:intergenic 35.0%
!!! GGGTTTTGAATTCTGCTTTA+AGG - tig0004809:8166-8185 Msa1341250:intron 35.0%
!!! GCTTTAAGGTCTTTTTTCCA+TGG - tig0004809:8180-8199 Msa1341250:intron 35.0%
GATTGCTTAAACAAAGCCTT+AGG - tig0004809:8287-8306 Msa1341250:intron 35.0%
TTGCTTAAACAAAGCCTTAG+GGG - tig0004809:8289-8308 Msa1341250:intron 35.0%
!! TTGTTGGTAGTGATAGAAGA+TGG + tig0004809:8500-8519 None:intergenic 35.0%
ATCTTCTATCACTACCAACA+AGG - tig0004809:8499-8518 Msa1341250:CDS 35.0%
ACCAAAATCTCAAGTTCAGA+AGG + tig0004809:8919-8938 None:intergenic 35.0%
!! GTGCTGCTTAATAAATGAAC+TGG + tig0004809:9126-9145 None:intergenic 35.0%
AAAGACTACCTTGTTGCATT+TGG - tig0004809:9268-9287 Msa1341250:intron 35.0%
AAGACTACCTTGTTGCATTT+GGG - tig0004809:9269-9288 Msa1341250:intron 35.0%
CTTTGTCAAACCTGATTAGA+CGG + tig0004809:9310-9329 None:intergenic 35.0%
! TTGTTTCTTGACTTATCAGG+TGG - tig0004809:9375-9394 Msa1341250:CDS 35.0%
!! TTTTCAAGCAGTATAGATGC+AGG + tig0004809:9463-9482 None:intergenic 35.0%
ATACAATGCAGATGTCAAGA+TGG - tig0004809:9675-9694 Msa1341250:intron 35.0%
GAAAAAAGGTAGTTTACCTG+AGG + tig0004809:9727-9746 None:intergenic 35.0%
! AAAACATGGTGTCAAACCTT+AGG - tig0004809:9827-9846 Msa1341250:intron 35.0%
! AAACATAGCGGAAAAACACT+AGG + tig0004809:9871-9890 None:intergenic 35.0%
!!! TTTTTTGGTCATGAGATGTG+GGG + tig0004809:9972-9991 None:intergenic 35.0%
CACACACATATGTTATTGTC+TGG - tig0004809:10032-10051 Msa1341250:intron 35.0%
TGTCTGGATTTAACTGCATT+TGG - tig0004809:10048-10067 Msa1341250:intron 35.0%
GTCTGGATTTAACTGCATTT+GGG - tig0004809:10049-10068 Msa1341250:intron 35.0%
! GATTTAACTGCATTTGGGTT+GGG - tig0004809:10054-10073 Msa1341250:intron 35.0%
ATTAAAGAAAATACGGCGGA+GGG + tig0004809:10085-10104 None:intergenic 35.0%
TATTAAAGAAAATACGGCGG+AGG + tig0004809:10086-10105 None:intergenic 35.0%
! TCCGCCGTATTTTCTTTAAT+AGG - tig0004809:10085-10104 Msa1341250:CDS 35.0%
CGTAAACTGATGAACATTAG+TGG - tig0004809:10299-10318 Msa1341250:CDS 35.0%
GTGCATCACTTTCAAATACT+TGG + tig0004809:10382-10401 None:intergenic 35.0%
GATCCTGATTTATCATTCTC+AGG + tig0004809:10428-10447 None:intergenic 35.0%
AAGGAAAAATGGAATGTTGG+AGG - tig0004809:10502-10521 Msa1341250:intron 35.0%
AGGAAAAATGGAATGTTGGA+GGG - tig0004809:10503-10522 Msa1341250:intron 35.0%
TTCCATTTCCTTCAATGCAT+CGG + tig0004809:10621-10640 None:intergenic 35.0%
! TATCATCTAAAACAGCCTTG+AGG + tig0004809:10751-10770 None:intergenic 35.0%
!! ATTGGTGTTATTTCCCAAAC+TGG - tig0004809:11003-11022 Msa1341250:five_prime_UTR 35.0%
AACCAGTTCAATAAGTCGAA+AGG + tig0004809:11075-11094 None:intergenic 35.0%
CAAACAGAGATTGCAATCTA+TGG - tig0004809:11136-11155 Msa1341250:intron 35.0%
GATTAGTGTAGATAATGAGG+AGG - tig0004809:11276-11295 Msa1341250:five_prime_UTR 35.0%
GAAGGATAGATAGAACTAAG+AGG + tig0004809:11340-11359 None:intergenic 35.0%
ATTCGAACGTTACGTTAGGT+AGG + tig0004809:4260-4279 None:intergenic 40.0%
!! ATCGATTCGAACGTTACGTT+AGG + tig0004809:4264-4283 None:intergenic 40.0%
!! AAAAATGGTGATGGTACTGC+TGG + tig0004809:4313-4332 None:intergenic 40.0%
TGAGGTGGAAAAAATGGTGA+TGG + tig0004809:4322-4341 None:intergenic 40.0%
! TTACTCCTATTAGCTTGAGG+TGG + tig0004809:4337-4356 None:intergenic 40.0%
AGAGTAATTAAATGTGGGGC+AGG + tig0004809:4440-4459 None:intergenic 40.0%
!! GAATAGAAGTACTGCTGCTT+CGG - tig0004809:4515-4534 Msa1341250:exon 40.0%
CTAGAAGTCCAGTTACTGTT+AGG - tig0004809:4889-4908 Msa1341250:intron 40.0%
TTTACCTCATTTCAGGGAGA+AGG - tig0004809:5029-5048 Msa1341250:CDS 40.0%
CTTATTCCCAATAACAGCAG+CGG + tig0004809:5367-5386 None:intergenic 40.0%
GGGAATAAGATCATAGTGGT+TGG - tig0004809:5378-5397 Msa1341250:CDS 40.0%
TGGATTGTTAGATGATGTGC+AGG - tig0004809:5416-5435 Msa1341250:CDS 40.0%
TGTTAGATGATGTGCAGGTA+TGG - tig0004809:5421-5440 Msa1341250:CDS 40.0%
TGTGATGTGACATGGATTCT+TGG - tig0004809:5523-5542 Msa1341250:intron 40.0%
! GTAAAGCTTTGATGTTGCCA+TGG + tig0004809:5599-5618 None:intergenic 40.0%
TTGCATGCAGGAATCTTTAG+GGG + tig0004809:5640-5659 None:intergenic 40.0%
CTTGCATGCAGGAATCTTTA+GGG + tig0004809:5641-5660 None:intergenic 40.0%
CTAAAGATTCCTGCATGCAA+GGG - tig0004809:5640-5659 Msa1341250:intron 40.0%
TGTCAAAGACAGTGCAACAA+TGG + tig0004809:5735-5754 None:intergenic 40.0%
GCAACTTTGAACCATATTCC+TGG + tig0004809:5990-6009 None:intergenic 40.0%
! CCTTTTTCCCATAAGATACC+TGG + tig0004809:6175-6194 None:intergenic 40.0%
CCAGGTATCTTATGGGAAAA+AGG - tig0004809:6172-6191 Msa1341250:CDS 40.0%
!! AAAAAGGCACTTCTCATTGG+AGG - tig0004809:6188-6207 Msa1341250:CDS 40.0%
!! AAAAGGCACTTCTCATTGGA+GGG - tig0004809:6189-6208 Msa1341250:CDS 40.0%
! ACCTGAAATTCTGTCACTTC+CGG + tig0004809:6225-6244 None:intergenic 40.0%
TTGATACAGAAAGTGAGTGC+TGG - tig0004809:6324-6343 Msa1341250:intron 40.0%
! TTGATCTCAAGTCGTTGACT+TGG - tig0004809:6981-7000 Msa1341250:intron 40.0%
ATCACTTACGTGTAGTGAAG+TGG + tig0004809:7010-7029 None:intergenic 40.0%
ACATGGTTCAATCTTGGAGA+AGG + tig0004809:7154-7173 None:intergenic 40.0%
GTTGCTACATGGTTCAATCT+TGG + tig0004809:7160-7179 None:intergenic 40.0%
CATCATAGAGAGTTGCTACA+TGG + tig0004809:7171-7190 None:intergenic 40.0%
TGTTTATGGGAGGGAGAATA+TGG + tig0004809:7497-7516 None:intergenic 40.0%
! CTGTCAAGTTGTTTATGGGA+GGG + tig0004809:7506-7525 None:intergenic 40.0%
! CGAGCTGTCAAGTTGTTTAT+GGG + tig0004809:7510-7529 None:intergenic 40.0%
CCATAAACAACTTGACAGCT+CGG - tig0004809:7508-7527 Msa1341250:intron 40.0%
TAAGCAAAAGGAGAGGAACT+GGG + tig0004809:7556-7575 None:intergenic 40.0%
AGCATCTCGGACAATTCAAA+AGG + tig0004809:7661-7680 None:intergenic 40.0%
! GCGTTTTGTGTGGTACTAAA+TGG - tig0004809:7805-7824 Msa1341250:intron 40.0%
AAATGGTATATTACAGGGGG+AGG - tig0004809:7822-7841 Msa1341250:intron 40.0%
TTCCATGGCACAAAATGATC+TGG - tig0004809:8195-8214 Msa1341250:intron 40.0%
!! TTGGTAGTGATAGAAGATGG+AGG + tig0004809:8497-8516 None:intergenic 40.0%
AAAAGGAATGAGCACCTTGT+TGG + tig0004809:8516-8535 None:intergenic 40.0%
AAATAGCACTAGAGCCAAGT+AGG + tig0004809:8546-8565 None:intergenic 40.0%
TTAATAGACGCTCTCATCAG+AGG - tig0004809:8606-8625 Msa1341250:intron 40.0%
!! GAGAGGCTGTTTCTAAGATT+TGG + tig0004809:8765-8784 None:intergenic 40.0%
TTAGTCTCCCTGATTCCATT+TGG - tig0004809:8812-8831 Msa1341250:CDS 40.0%
! GCCTTCTGAACTTGAGATTT+TGG - tig0004809:8915-8934 Msa1341250:intron 40.0%
AGACTACCTTGTTGCATTTG+GGG - tig0004809:9270-9289 Msa1341250:intron 40.0%
!!! CTGATTAGACGGCTCTTTTT+TGG + tig0004809:9299-9318 None:intergenic 40.0%
CAAAAAAGAGCCGTCTAATC+AGG - tig0004809:9297-9316 Msa1341250:intron 40.0%
!! GTTCTGGTTCATTCTTATGG+AGG - tig0004809:9344-9363 Msa1341250:intron 40.0%
ATAGATGCAGGACCTTTACT+GGG + tig0004809:9451-9470 None:intergenic 40.0%
TATAGATGCAGGACCTTTAC+TGG + tig0004809:9452-9471 None:intergenic 40.0%
AACAGAGTCAACTAAGCGTT+GGG + tig0004809:9530-9549 None:intergenic 40.0%
TTAGCATCTGCAGTTGAACA+TGG - tig0004809:9562-9581 Msa1341250:intron 40.0%
GCGATCAAATTGCTTACGAA+GGG + tig0004809:9647-9666 None:intergenic 40.0%
AAGATGGACAAGAACTCAGA+TGG - tig0004809:9691-9710 Msa1341250:intron 40.0%
AGATGGAAGTTCTTTACCTC+AGG - tig0004809:9708-9727 Msa1341250:intron 40.0%
!! TCTCATTCTAAAGCACCTGT+TGG - tig0004809:9769-9788 Msa1341250:intron 40.0%
! CCTAATGCTTTAAGTCCAAC+AGG + tig0004809:9787-9806 None:intergenic 40.0%
! CCTGTTGGACTTAAAGCATT+AGG - tig0004809:9784-9803 Msa1341250:intron 40.0%
ATGTACAGGGTAAATGCCTA+AGG + tig0004809:9846-9865 None:intergenic 40.0%
!! TTTTTGGTCATGAGATGTGG+GGG + tig0004809:9971-9990 None:intergenic 40.0%
GGATTTAACTGCATTTGGGT+TGG - tig0004809:10053-10072 Msa1341250:intron 40.0%
!! CGTAACTTTTGGTGCATTTC+AGG - tig0004809:10244-10263 Msa1341250:intron 40.0%
!! AACTTTTGGTGCATTTCAGG+TGG - tig0004809:10247-10266 Msa1341250:intron 40.0%
GGAGCCAAGGTTAATATTGA+AGG - tig0004809:10320-10339 Msa1341250:CDS 40.0%
AGTGATGCACTAGAAAGTGA+AGG - tig0004809:10392-10411 Msa1341250:intron 40.0%
GTAAAGTAGCAGCCCTAATA+AGG - tig0004809:10483-10502 Msa1341250:intron 40.0%
GCAGCCCTAATAAGGAAAAA+TGG - tig0004809:10491-10510 Msa1341250:intron 40.0%
ATCTGTCCATAAAAGCAGAC+AGG - tig0004809:10577-10596 Msa1341250:CDS 40.0%
!! CCATTTCCTGTCTGCTTTTA+TGG + tig0004809:10586-10605 None:intergenic 40.0%
CCATAAAAGCAGACAGGAAA+TGG - tig0004809:10583-10602 Msa1341250:CDS 40.0%
AAAATTGGCCGATGCATTGA+AGG - tig0004809:10610-10629 Msa1341250:CDS 40.0%
! TAAGTTGTTGGCCTCTTCTT+GGG + tig0004809:10678-10697 None:intergenic 40.0%
! ATAAGTTGTTGGCCTCTTCT+TGG + tig0004809:10679-10698 None:intergenic 40.0%
! ATCTAAAACAGCCTTGAGGA+AGG + tig0004809:10747-10766 None:intergenic 40.0%
! CACTCTGATGCTTTTATGCA+TGG - tig0004809:10807-10826 Msa1341250:CDS 40.0%
AACCTAACTCAGACCAGTTT+GGG + tig0004809:11019-11038 None:intergenic 40.0%
CAGTTCAATAAGTCGAAAGG+AGG + tig0004809:11072-11091 None:intergenic 40.0%
CTCCTTTCGACTTATTGAAC+TGG - tig0004809:11070-11089 Msa1341250:five_prime_UTR 40.0%
ACTGGTTGTCATCTCATTGT+TGG - tig0004809:11088-11107 Msa1341250:intron 40.0%
CGTGCAGTGAAGTAGATAAT+TGG - tig0004809:11196-11215 Msa1341250:five_prime_UTR 40.0%
CAGAAAAACTAGCAACGAAG+TGG + tig0004809:11231-11250 None:intergenic 40.0%
ACGTTAGGTAGGTAGCAAGA+TGG + tig0004809:4249-4268 None:intergenic 45.0%
CTGGATAAACAGAGACAGAG+AGG + tig0004809:4288-4307 None:intergenic 45.0%
CTCTCTGTCTCTGTTTATCC+AGG - tig0004809:4286-4305 Msa1341250:three_prime_UTR 45.0%
TCTCGTAGACGCACCAAATT+CGG - tig0004809:4755-4774 Msa1341250:intron 45.0%
AAGGTTCAGCAGCTTTCTGA+TGG - tig0004809:4864-4883 Msa1341250:intron 45.0%
TTGGGATGCCTAACAGTAAC+TGG + tig0004809:4900-4919 None:intergenic 45.0%
TTCTCCTTCTCCCTGAAATG+AGG + tig0004809:5036-5055 None:intergenic 45.0%
AGGGAGAAGGAGAAGAAGAT+GGG - tig0004809:5042-5061 Msa1341250:CDS 45.0%
ATCAGTACTTGTAGCTCAGG+CGG - tig0004809:5131-5150 Msa1341250:CDS 45.0%
! TGACACATTTTCGTGGACCA+TGG - tig0004809:5579-5598 Msa1341250:intron 45.0%
! ATCTTTAGGGGCAGACTACT+GGG + tig0004809:5628-5647 None:intergenic 45.0%
! AATCTTTAGGGGCAGACTAC+TGG + tig0004809:5629-5648 None:intergenic 45.0%
CCTTGCATGCAGGAATCTTT+AGG + tig0004809:5642-5661 None:intergenic 45.0%
CCTAAAGATTCCTGCATGCA+AGG - tig0004809:5639-5658 Msa1341250:intron 45.0%
GACAGTGCAACAATGGCTAA+GGG + tig0004809:5728-5747 None:intergenic 45.0%
AGACAGTGCAACAATGGCTA+AGG + tig0004809:5729-5748 None:intergenic 45.0%
GGGATTCTGTAATAGCGCAA+AGG - tig0004809:5950-5969 Msa1341250:intron 45.0%
!! GGGAAAAAGGCACTTCTCAT+TGG - tig0004809:6185-6204 Msa1341250:CDS 45.0%
ATTGGAGGGAAAACAGATCC+CGG - tig0004809:6203-6222 Msa1341250:CDS 45.0%
! CCTGAAATTCTGTCACTTCC+GGG + tig0004809:6224-6243 None:intergenic 45.0%
TCTTGATAGGTTGCTCGCAA+TGG - tig0004809:6872-6891 Msa1341250:intron 45.0%
CAATGGTCACAGTGTTGTCA+GGG - tig0004809:6889-6908 Msa1341250:intron 45.0%
TTGGGGGTGAAGATGCAAAA+AGG - tig0004809:6933-6952 Msa1341250:intron 45.0%
GGAGGGAGAATATGGTTATG+TGG + tig0004809:7489-7508 None:intergenic 45.0%
! GCTGTCAAGTTGTTTATGGG+AGG + tig0004809:7507-7526 None:intergenic 45.0%
! CCGAGCTGTCAAGTTGTTTA+TGG + tig0004809:7511-7530 None:intergenic 45.0%
TGGGGAAGACAAGGAATAAG+GGG + tig0004809:7537-7556 None:intergenic 45.0%
CTGGGGAAGACAAGGAATAA+GGG + tig0004809:7538-7557 None:intergenic 45.0%
ACTGGGGAAGACAAGGAATA+AGG + tig0004809:7539-7558 None:intergenic 45.0%
AAGCAAAAGGAGAGGAACTG+GGG + tig0004809:7555-7574 None:intergenic 45.0%
GTAAGCAAAAGGAGAGGAAC+TGG + tig0004809:7557-7576 None:intergenic 45.0%
TACATAAACCTTCCAGGCTC+TGG - tig0004809:7574-7593 Msa1341250:intron 45.0%
ACATAAACCTTCCAGGCTCT+GGG - tig0004809:7575-7594 Msa1341250:intron 45.0%
ATGTGGGTCTGAACTATGCA+AGG + tig0004809:7601-7620 None:intergenic 45.0%
! AGAGCACTAGATCAGGATGT+GGG + tig0004809:7617-7636 None:intergenic 45.0%
! TAGAGCACTAGATCAGGATG+TGG + tig0004809:7618-7637 None:intergenic 45.0%
GATGGCATGGTCAAGAGTAA+AGG - tig0004809:7743-7762 Msa1341250:intron 45.0%
TGGTCAAGAGTAAAGGTTCG+AGG - tig0004809:7750-7769 Msa1341250:intron 45.0%
! AGCCAGATCATTTTGTGCCA+TGG + tig0004809:8200-8219 None:intergenic 45.0%
AATGCTAACAAGTGCCCCTA+AGG + tig0004809:8306-8325 None:intergenic 45.0%
! TCCTTTTCATGCCACCTACT+TGG - tig0004809:8529-8548 Msa1341250:CDS 45.0%
ACTACAATAGAGGCAAGCCT+TGG - tig0004809:8688-8707 Msa1341250:intron 45.0%
ACATGTGATCACCAGGTCTA+AGG + tig0004809:8742-8761 None:intergenic 45.0%
GATTTGGACATGTGATCACC+AGG + tig0004809:8749-8768 None:intergenic 45.0%
CCTTACTATTGCAAGCAGAG+AGG + tig0004809:8782-8801 None:intergenic 45.0%
CCTCTCTGCTTGCAATAGTA+AGG - tig0004809:8779-8798 Msa1341250:CDS 45.0%
TCTCCCTGATTCCATTTGGT+GGG - tig0004809:8816-8835 Msa1341250:CDS 45.0%
AAGGTCGGTAAAGTGCACAA+CGG + tig0004809:8843-8862 None:intergenic 45.0%
!! CTTGGTGCTTGTGCAATACA+AGG - tig0004809:9243-9262 Msa1341250:intron 45.0%
GACTACCTTGTTGCATTTGG+GGG - tig0004809:9271-9290 Msa1341250:intron 45.0%
! GACTTATCAGGTGGAAGTGT+TGG - tig0004809:9384-9403 Msa1341250:CDS 45.0%
!! TCAGGTGGAAGTGTTGGAAT+TGG - tig0004809:9390-9409 Msa1341250:CDS 45.0%
AGACGTTCAACTCCCAGTAA+AGG - tig0004809:9436-9455 Msa1341250:CDS 45.0%
AAGCTGAGAGGCTAATCTAG+TGG + tig0004809:9497-9516 None:intergenic 45.0%
GGAACAGTGATTAAGCTGAG+AGG + tig0004809:9509-9528 None:intergenic 45.0%
CAACAGAGTCAACTAAGCGT+TGG + tig0004809:9531-9550 None:intergenic 45.0%
TCTGCAGTTGAACATGGTTC+TGG - tig0004809:9568-9587 Msa1341250:intron 45.0%
!! CAGTTGAACATGGTTCTGGA+AGG - tig0004809:9572-9591 Msa1341250:intron 45.0%
ACATTGCTTGGGGGGTAATT+GGG + tig0004809:9622-9641 None:intergenic 45.0%
TACGAAGGGAGACATTGCTT+GGG + tig0004809:9633-9652 None:intergenic 45.0%
TTACGAAGGGAGACATTGCT+TGG + tig0004809:9634-9653 None:intergenic 45.0%
CGCGATCAAATTGCTTACGA+AGG + tig0004809:9648-9667 None:intergenic 45.0%
! TTTTGGTCATGAGATGTGGG+GGG + tig0004809:9970-9989 None:intergenic 45.0%
TGTGTGTGTATTTGCCTGTG+TGG + tig0004809:10018-10037 None:intergenic 45.0%
GATGAACATTAGTGGAGCCA+AGG - tig0004809:10307-10326 Msa1341250:CDS 45.0%
! GAAGGACAAGTGTTGTTGTC+CGG - tig0004809:10338-10357 Msa1341250:CDS 45.0%
! AAGGACAAGTGTTGTTGTCC+GGG - tig0004809:10339-10358 Msa1341250:CDS 45.0%
TTGTCCACTCTGACAACGTT+CGG - tig0004809:10705-10724 Msa1341250:intron 45.0%
TTATTGCAGGGGAAAGAGCT+AGG - tig0004809:10882-10901 Msa1341250:intron 45.0%
TATTGCAGGGGAAAGAGCTA+GGG - tig0004809:10883-10902 Msa1341250:intron 45.0%
! TTCCCAAACTGGTCTGAGTT+AGG - tig0004809:11014-11033 Msa1341250:five_prime_UTR 45.0%
GAACCTAACTCAGACCAGTT+TGG + tig0004809:11020-11039 None:intergenic 45.0%
ATCGAACTTCTACTACACCC+AGG - tig0004809:11162-11181 Msa1341250:intron 45.0%
TGCACGTGAAATGGTTTCCT+GGG + tig0004809:11182-11201 None:intergenic 45.0%
CTACTTCACTGCACGTGAAA+TGG + tig0004809:11191-11210 None:intergenic 45.0%
CTGTCTATTAACGTGAGCTG+AGG - tig0004809:11447-11466 Msa1341250:five_prime_UTR 45.0%
TCTATTAACGTGAGCTGAGG+TGG - tig0004809:11450-11469 Msa1341250:five_prime_UTR 45.0%
CTGAAGCAAGCAAGCAAGCA+AGG + tig0004809:4496-4515 None:intergenic 50.0%
GTAGACGCACCAAATTCGGA+AGG - tig0004809:4759-4778 Msa1341250:intron 50.0%
CAGGGAGAAGGAGAAGAAGA+TGG - tig0004809:5041-5060 Msa1341250:CDS 50.0%
GGGAGAAGGAGAAGAAGATG+GGG - tig0004809:5043-5062 Msa1341250:CDS 50.0%
GAAGATGGGGATGCAGTTAC+CGG - tig0004809:5056-5075 Msa1341250:CDS 50.0%
ATGAGAATGGCCACTTGAGC+CGG + tig0004809:5078-5097 None:intergenic 50.0%
TAGCATGCCGCTGCTGTTAT+TGG - tig0004809:5357-5376 Msa1341250:CDS 50.0%
AGCATGCCGCTGCTGTTATT+GGG - tig0004809:5358-5377 Msa1341250:CDS 50.0%
AAACTATGGCCCTTGCATGC+AGG + tig0004809:5652-5671 None:intergenic 50.0%
TGCATGCAAGGGCCATAGTT+TGG - tig0004809:5651-5670 Msa1341250:intron 50.0%
CCCGGAAGTGACAGAATTTC+AGG - tig0004809:6221-6240 Msa1341250:CDS 50.0%
!! AAGTGAGTGCTGGTCACTCA+TGG - tig0004809:6334-6353 Msa1341250:intron 50.0%
TGGTCACTCATGGAGGCAAA+GGG - tig0004809:6344-6363 Msa1341250:intron 50.0%
GCAATGGTCACAGTGTTGTC+AGG - tig0004809:6888-6907 Msa1341250:intron 50.0%
GGGGTGAAGATGCAAAAAGG+AGG - tig0004809:6936-6955 Msa1341250:intron 50.0%
! CTTGACTCGTGAAGAAGCTC+AGG + tig0004809:7388-7407 None:intergenic 50.0%
TTCCATCCATCACCTAGAGC+TGG - tig0004809:7774-7793 Msa1341250:intron 50.0%
!! AACCAGCTCTAGGTGATGGA+TGG + tig0004809:7779-7798 None:intergenic 50.0%
!! CAACAACCAGCTCTAGGTGA+TGG + tig0004809:7783-7802 None:intergenic 50.0%
TCACCTAGAGCTGGTTGTTG+TGG - tig0004809:7783-7802 Msa1341250:intron 50.0%
! GGTTGTTGTGGCGTTTTGTG+TGG - tig0004809:7795-7814 Msa1341250:intron 50.0%
GTATTCCCACCTCATTTCCC+AGG - tig0004809:8410-8429 Msa1341250:intron 50.0%
CATGTCCTGGGAAATGAGGT+GGG + tig0004809:8418-8437 None:intergenic 50.0%
TCTCCATGTCCTGGGAAATG+AGG + tig0004809:8422-8441 None:intergenic 50.0%
TCAGAGTCTCTCCATGTCCT+GGG + tig0004809:8430-8449 None:intergenic 50.0%
ATCAGAGTCTCTCCATGTCC+TGG + tig0004809:8431-8450 None:intergenic 50.0%
GCCAAGTAGGTGGCATGAAA+AGG + tig0004809:8533-8552 None:intergenic 50.0%
TAGCACTAGAGCCAAGTAGG+TGG + tig0004809:8543-8562 None:intergenic 50.0%
TAGACGCTCTCATCAGAGGA+TGG - tig0004809:8610-8629 Msa1341250:intron 50.0%
! GGTTGTTGTTGCCTTAGACC+TGG - tig0004809:8728-8747 Msa1341250:CDS 50.0%
GTCTCCCTGATTCCATTTGG+TGG - tig0004809:8815-8834 Msa1341250:CDS 50.0%
GGTCCCACCAAATGGAATCA+GGG + tig0004809:8822-8841 None:intergenic 50.0%
TGGATCCCCCAAATGCAACA+AGG + tig0004809:9279-9298 None:intergenic 50.0%
GACATTGCTTGGGGGGTAAT+TGG + tig0004809:9623-9642 None:intergenic 50.0%
ACGAAGGGAGACATTGCTTG+GGG + tig0004809:9632-9651 None:intergenic 50.0%
TGGAATGTTGGAGGGTCAAC+TGG - tig0004809:10511-10530 Msa1341250:intron 50.0%
AGCAGAGAAGCTGCAGAGAA+AGG - tig0004809:10548-10567 Msa1341250:CDS 50.0%
GGCCGATGCATTGAAGGAAA+TGG - tig0004809:10616-10635 Msa1341250:CDS 50.0%
TTACTGCGAGAGAAGCTAGC+CGG - tig0004809:10641-10660 Msa1341250:CDS 50.0%
TTCTTGGGCCAACTCTAGAC+CGG + tig0004809:10663-10682 None:intergenic 50.0%
! TCTAGAGTTGGCCCAAGAAG+AGG - tig0004809:10664-10683 Msa1341250:CDS 50.0%
TCGACACGAGGAGTTATTGC+AGG - tig0004809:10869-10888 Msa1341250:intron 50.0%
CGACACGAGGAGTTATTGCA+GGG - tig0004809:10870-10889 Msa1341250:intron 50.0%
GACACGAGGAGTTATTGCAG+GGG - tig0004809:10871-10890 Msa1341250:intron 50.0%
! AGCTAGGGCATTCCAACTAC+AGG - tig0004809:10898-10917 Msa1341250:intron 50.0%
GGGCATTCCAACTACAGGTA+CGG - tig0004809:10903-10922 Msa1341250:intron 50.0%
GATGTAGCCGTACCTGTAGT+TGG + tig0004809:10913-10932 None:intergenic 50.0%
CTGCACGTGAAATGGTTTCC+TGG + tig0004809:11183-11202 None:intergenic 50.0%
! ACTGCTGCTTCGGTTCAAGC+TGG - tig0004809:4525-4544 Msa1341250:CDS 55.0%
! CTGCTGCTTCGGTTCAAGCT+GGG - tig0004809:4526-4545 Msa1341250:CDS 55.0%
!! GATGCAGTTACCGGCTCAAG+TGG - tig0004809:5065-5084 Msa1341250:CDS 55.0%
CTCAGGCGGTTCCGAGAATT+GGG - tig0004809:5145-5164 Msa1341250:CDS 55.0%
!! TGAGTGCTGGTCACTCATGG+AGG - tig0004809:6337-6356 Msa1341250:intron 55.0%
CTGGTCACTCATGGAGGCAA+AGG - tig0004809:6343-6362 Msa1341250:intron 55.0%
GGAGGCAAAGGGAGACATAC+CGG - tig0004809:6355-6374 Msa1341250:intron 55.0%
GCAAAGGGAGACATACCGGT+AGG - tig0004809:6359-6378 Msa1341250:intron 55.0%
AGCTGCGCTACTTCTTAGCG+TGG - tig0004809:6395-6414 Msa1341250:intron 55.0%
GAGAGGAACTGGGGAAGACA+AGG + tig0004809:7546-7565 None:intergenic 55.0%
ACGCCACAACAACCAGCTCT+AGG + tig0004809:7789-7808 None:intergenic 55.0%
CCATGTCCTGGGAAATGAGG+TGG + tig0004809:8419-8438 None:intergenic 55.0%
CCACCTCATTTCCCAGGACA+TGG - tig0004809:8416-8435 Msa1341250:intron 55.0%
CGGTCCCACCAAATGGAATC+AGG + tig0004809:8823-8842 None:intergenic 55.0%
TGCACAACGGTCCCACCAAA+TGG + tig0004809:8830-8849 None:intergenic 55.0%
CAAGCACCAAGCTGAAACCC+TGG + tig0004809:9234-9253 None:intergenic 55.0%
GAAGGGAGACATTGCTTGGG+GGG + tig0004809:9630-9649 None:intergenic 55.0%
CGAAGGGAGACATTGCTTGG+GGG + tig0004809:9631-9650 None:intergenic 55.0%
GATGTGGGGGGTAACAAGAC+AGG + tig0004809:9958-9977 None:intergenic 55.0%
GGTCTCTCTCTAGTCCACAC+AGG - tig0004809:10001-10020 Msa1341250:intron 55.0%
TGCAGCTTCTCTGCTTGCCA+TGG + tig0004809:10543-10562 None:intergenic 55.0%
! GAAGCTAGCCGGTCTAGAGT+TGG - tig0004809:10652-10671 Msa1341250:CDS 55.0%
TAGGAGTTGCACTCGACACG+AGG - tig0004809:10857-10876 Msa1341250:intron 55.0%
! GGTGATGGTACTGCTGGTCC+TGG + tig0004809:4307-4326 None:intergenic 60.0%
GCTCAGGCGGTTCCGAGAAT+TGG - tig0004809:5144-5163 Msa1341250:CDS 60.0%
GTTGGCGGTGAGTCTGCTAC+TGG - tig0004809:5396-5415 Msa1341250:CDS 60.0%
ACTATGCAAGGCCCAGAGCC+TGG + tig0004809:7589-7608 None:intergenic 60.0%
GGGTCAACTGGCAGCTTCCA+TGG - tig0004809:10523-10542 Msa1341250:CDS 60.0%
CGAGCCGAACGTTGTCAGAG+TGG + tig0004809:10712-10731 None:intergenic 60.0%
GCATGACGTGGCCTTCCTCA+AGG - tig0004809:10733-10752 Msa1341250:intron 60.0%
TGCAAGGCCCAGAGCCTGGA+AGG + tig0004809:7585-7604 None:intergenic 65.0%
! CGTTCGGCTCGAGCATGACG+TGG - tig0004809:10721-10740 Msa1341250:intron 65.0%
Chromosome Type Strat End Strand Name
tig0004809 gene 4228 11500 4228 ID=Msa1341250;Name=Msa1341250
tig0004809 mRNA 4228 11500 4228 ID=Msa1341250-mRNA-1;Parent=Msa1341250;Name=Msa1341250-mRNA-1;_AED=0.10;_eAED=0.10;_QI=426|1|0.93|1|0.93|0.87|16|295|741
tig0004809 exon 4228 4609 4228 ID=Msa1341250-mRNA-1:exon:3082;Parent=Msa1341250-mRNA-1
tig0004809 exon 4809 4868 4809 ID=Msa1341250-mRNA-1:exon:3081;Parent=Msa1341250-mRNA-1
tig0004809 exon 4950 5462 4950 ID=Msa1341250-mRNA-1:exon:3080;Parent=Msa1341250-mRNA-1
tig0004809 exon 5999 6334 5999 ID=Msa1341250-mRNA-1:exon:3079;Parent=Msa1341250-mRNA-1
tig0004809 exon 6410 6493 6410 ID=Msa1341250-mRNA-1:exon:3078;Parent=Msa1341250-mRNA-1
tig0004809 exon 7208 7296 7208 ID=Msa1341250-mRNA-1:exon:3077;Parent=Msa1341250-mRNA-1
tig0004809 exon 7870 7984 7870 ID=Msa1341250-mRNA-1:exon:3076;Parent=Msa1341250-mRNA-1
tig0004809 exon 8461 8587 8461 ID=Msa1341250-mRNA-1:exon:3075;Parent=Msa1341250-mRNA-1
tig0004809 exon 8708 8847 8708 ID=Msa1341250-mRNA-1:exon:3074;Parent=Msa1341250-mRNA-1
tig0004809 exon 9352 9552 9352 ID=Msa1341250-mRNA-1:exon:3073;Parent=Msa1341250-mRNA-1
tig0004809 exon 10056 10160 10056 ID=Msa1341250-mRNA-1:exon:3072;Parent=Msa1341250-mRNA-1
tig0004809 exon 10291 10368 10291 ID=Msa1341250-mRNA-1:exon:3071;Parent=Msa1341250-mRNA-1
tig0004809 exon 10517 10684 10517 ID=Msa1341250-mRNA-1:exon:3070;Parent=Msa1341250-mRNA-1
tig0004809 exon 10784 10868 10784 ID=Msa1341250-mRNA-1:exon:3069;Parent=Msa1341250-mRNA-1
tig0004809 exon 10948 11091 10948 ID=Msa1341250-mRNA-1:exon:3068;Parent=Msa1341250-mRNA-1
tig0004809 exon 11181 11500 11181 ID=Msa1341250-mRNA-1:exon:3067;Parent=Msa1341250-mRNA-1
tig0004809 five_prime_UTR 11181 11500 11181 ID=Msa1341250-mRNA-1:five_prime_utr;Parent=Msa1341250-mRNA-1
tig0004809 five_prime_UTR 10986 11091 10986 ID=Msa1341250-mRNA-1:five_prime_utr;Parent=Msa1341250-mRNA-1
tig0004809 CDS 10948 10985 10948 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 10784 10868 10784 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 10517 10684 10517 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 10291 10368 10291 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 10056 10160 10056 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 9352 9552 9352 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 8708 8847 8708 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 8461 8587 8461 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 7870 7984 7870 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 7208 7296 7208 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 6410 6493 6410 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 5999 6334 5999 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 4950 5462 4950 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 4809 4868 4809 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 CDS 4523 4609 4523 ID=Msa1341250-mRNA-1:cds;Parent=Msa1341250-mRNA-1
tig0004809 three_prime_UTR 4228 4522 4228 ID=Msa1341250-mRNA-1:three_prime_utr;Parent=Msa1341250-mRNA-1
Gene Sequence

>Msa1341250

ATGTTTGGGTTCTCTCGTAGACGCACCAAATTCGGAAGATTGAAGGTTCAGCAGCTTTCTGATGGTACTAGAAGTCCAGTTACTGTTAGGCATCCCAAACGAATTCCAAATTCCATTCTCAATGGAGAAGGAGAAGAAGATGGGGATGCAGTTACCGGCTCAAGTGGCCATTCTCATGAAATTGATAATGAAATTGTTAGCAGCACCAATATCAGTACTTGTAGCTCAGGCGGTTCCGAGAATTGGGTATTGTTGTCAATTTCTGGAGATAAGCCCGCTCCTAGATTCAATCATGCCGCTGCTGTTATTGGGAATAAGATCATAGTGGTTGGCGGTGAGTCTGCTACTGGATTGTTAGATGATGTGCAGGTGCTGAATTTTGACACATTTTCGTGGACCATGGCAACATCAAAGCTTTACTTGTCTCCCAGTAGTCTGCCCCTAAAGATTCCTGCATGCAAGGGCCATAGTTTGGTATCTTATGGGAAAAAGGCACTTCTCATTGGAGGGAAAACAGATCCCGGAAGTGACAGAATTTCAGGTTCAATTCGTGTTCTTCTCATGTATATTTCACGCTGTGATGTTGCTCTGATTATCTTTTTGGTGTTTGCAGTATGGGCATTTGATACAGAAAGTGAGTGCTGGTCACTCATGGAGGCAAAGGGAGACATACCGGTTGCTCGCAATGGTCACAGTGTTGTCAGGGCAAGCTCTTATTTGATATTGTTTGGGGGTGAAGATGCAAAAAGGAGGAAACTGAATGATCTACATATGTTTGATCTCAAGTCGTTGACTTGGCTTCCACTTCACTACACGGGAACAGCACCTTCTCCAAGATTGAACCATGTAGCAACTCTCTATGATGATAAAGTTCTTTATATATTTGGAGGATCCTCAAAATCCAAAACCTTAAATGATTTATATTCACTTGACTTTGAAACGATGGCATGGTCAAGAGTAAAGGTTCGAGGTTTCCATCCATCACCTAGAGCTGGTTGTTGTGGCGTTTTGTGTGGTACTAAATGGTATATTACAGGGGGAGGAAGCAAGAAAAAACGACATGGAGAGACTCTGATTTTTGATATTGTAAAAAATGAATGGTCTGTGGCAATTACATCACCTCCATCTTCTATCACTACCAACAAGGGTTTCAGCTTGGTGCTTGTGCAATACAAGGAAAAAGACTACCTTGTTGCATTTGGGGGATCCAAAAAAGAGCCGTCTAATCAGGTGGAAGTGTTGGAATTGGATAAGAATGAATCAGCACTTAGAAGACGTTCAACTCCCAGTAAAGGTCCTGCATCTATACTGCTTGAAAAACATTCATCATCCACTAGATTAGCCTCTCAGCTTAATCACTGTTCCCAACGCTTAGTTGACTCTGTTGCTAGACAAAATTTAGCATCTGCAGTTGAACATGGTTCTGGAAGGAAATCTCTTTCCGAATCTATAGATCCCAATTACCCCCCAAGCAATGTCTCCCTTCGTAAGCAATTTGATCGCGATGAAGAATACAATGCAGATGTCAAGATGGACAAGAACTCAGATGGAAGTTCTTTACCTCAGGTGGCAGATCACAGAACAAATGAAAATGACCGTCGTAAACTGATGAACATTAGTGGAGCCAAGGTTAATATTGAAGGACAAGTGTTGTTGTCCGGGATATCAAATCAACAAAACCAAGTATTTGAAAGTGATGCACTAGAAAGTGAAGGTGTGTCTTTTCCTGAGAATGATAAATCAGGATCACTTTCTTCTACAAATATCTACCAATACTATGAAAGTAAAGTAGCAGCCCTAATAAGGAAAAATGGAATGTTGGAGGGTCAACTGGCAGCTTCCATGGCAAGCAGAGAAGCTGCAGAGAAAGGCTTAGCATCTGTCCATAAAAGCAGACAGGAAATGGAGAAAAAATTGGCCGATGCATTGAAGGAAATGGAATTACTGCGAGAGAAGCTAGCCGGTCTAGAGTTGGCCCAAGAAGAGGCCAACAACTTATCAAACATTGTCCACTCTGACAACGTTCGGCTCGAGCATGACGTGGCCTTCCTCAAGGCTGTTTTAGATGATACACAGAAGGAGTTGCACTCGACACGAGGAGTTATTGCAGGGGAAAGAGCTAGGGCATTCCAACTACAGTATGAAGTTTTTCATCTCAAACAGAGATTGCAATCTATGGAAAATCGAACTTCTACTACACCCAGGAAACCATTTCACGTGCAGTGA
Protein sequence

>Msa1341250

MFGFSRRRTKFGRLKVQQLSDGTRSPVTVRHPKRIPNSILNGEGEEDGDAVTGSSGHSHEIDNEIVSSTNISTCSSGGSENWVLLSISGDKPAPRFNHAAAVIGNKIIVVGGESATGLLDDVQVLNFDTFSWTMATSKLYLSPSSLPLKIPACKGHSLVSYGKKALLIGGKTDPGSDRISGSIRVLLMYISRCDVALIIFLVFAVWAFDTESECWSLMEAKGDIPVARNGHSVVRASSYLILFGGEDAKRRKLNDLHMFDLKSLTWLPLHYTGTAPSPRLNHVATLYDDKVLYIFGGSSKSKTLNDLYSLDFETMAWSRVKVRGFHPSPRAGCCGVLCGTKWYITGGGSKKKRHGETLIFDIVKNEWSVAITSPPSSITTNKGFSLVLVQYKEKDYLVAFGGSKKEPSNQVEVLELDKNESALRRRSTPSKGPASILLEKHSSSTRLASQLNHCSQRLVDSVARQNLASAVEHGSGRKSLSESIDPNYPPSNVSLRKQFDRDEEYNADVKMDKNSDGSSLPQVADHRTNENDRRKLMNISGAKVNIEGQVLLSGISNQQNQVFESDALESEGVSFPENDKSGSLSSTNIYQYYESKVAALIRKNGMLEGQLAASMASREAAEKGLASVHKSRQEMEKKLADALKEMELLREKLAGLELAQEEANNLSNIVHSDNVRLEHDVAFLKAVLDDTQKELHSTRGVIAGERARAFQLQYEVFHLKQRLQSMENRTSTTPRKPFHVQ*